Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0002417

Physical Location & Seq

Genomic Coordinates Reverse (-)

2545977 .. 2548841

Gene Structure 2865 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG040000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1818 bp

ATGGCGACAAAAGGGAACTCAGGAGACAACAGAAGTCGAAGTTCGATATCAGTTTTCATTGTAGCTGGTCTCTGTTGTTTCTTTTACATATTGGGTGCGTGGCAGCGAAGTGGTTTTGGAAAGGGAGATAGCATAGCTGTGGAGATTACCAGGCAGACAGACTGCAGTATCCTTTCCACTCTGAATTATGAGACCCATCACGGAATTGATGAAGGAGTGATCAAGGAGTTCAAACCGTGCGCCGATCGCTACATCGATTACACTCCTTGTCATGACCAAATGCGAGCCATGACTTTCCCCCGAGAAAATATGAATTACAGGGAACGACATTGTCCTCGTGAAGAAGAGAAGTTGCATTGCCTTATCCCAGCACCCAAAGGTTATGTGACCCCTTTTCGGTGGCCCCAAAGCCGTGACTATGTACCGTATGCCAATGCGCCTTATAAGAGCCTGACAGTAGAGAAGGCTGTTCAGAACTGGATTCAATATGAGGGCAATGTCTTTAGGTTCCCGGGTGGTGGAACACAGTTTCCTCATGGAGCAGATGCATATATCAATGAACTTGCAGCTGTGATTCCCATGGACAATGGGATAGTTAGAACTGCATTAGACACTGGATGTGGGGTTGCCAGCTGGGGTGCTTACCTGTTTAAAAAGAATGTTATAGCCATGTCATTCGCACCAAGAGACTCTCATGAAGCACAGGTTCAATTTGCTCTGGAAAGAGGTGTTCCAGCAGTTATTGGTGTTCTTGGAACTATAAAGCTGCCATATCCTTCTAGGGCCTTTGACATGGCTCACTGTTCTCGTTGCCTCATTCCATGGAGTGGAAATGATGGAATGTACATGATGGAAGTGGATCGAGTTCTTAGACCTGGTGGTTACTGGGTGCTTTCTGGTCCTCCTATTAACTGGAGGAACAATTTTGTTGCATGGCAGCGGCCTAAAGAAGAACTTGAGGAAGAGCAGAGGAAGATCGAAGATACTGCAAAGCTTCTTGGCTGGGAAAAGAAGCATGAGAAGGGTGAAATTGCCATATGGAGAAAACGAACTGGCTTTCGTCATGACCAAGATCCTCAACCTACTATGTGTGAATCCAGGAATGCTGATGATGTTTGGTACAAAAAGATGGAATTGTGCATAACTCCTTCTCCCGAGACTATTAGTCATGATGAGGATGGTGGTGCGGCATGGAAGCCATATCCCGAAAGGCTCAAGGTTTTACCTTCCAGAATATCCACCGGATCTGTCCCTGGAGTCTCTGCAGATACATTCGAGGACGACAACAAGGCATGGAAGAAACATGTGAGTGCATATAAGAGGACCAACAAATTGTTGGATACAGGAAGGTATCGCAATATTATGGATATGAATGCTGGTCTTGGAAGTTTTGCTGCTGCTCTTGATTCTCCCAAACTGTGGGTAATGAATGTTATGCCCACAATAGCTGAGAAAGACACTTTGGGAGTCGTATTTGAGCGTGGATTAATAGGCATTTATCATGATTGGTGTGAAGCCTTCTCCACGTATCCAAGGACATATGACCTCATTCATGCAAATGGTATTTTCAGCTTGTATAAGGATAAGTGTGATGTTGAAGATATTCTTCTTGAGATGGATCGCATTCTACGGCCTGAGGGAGCTGTGATAATTCGTGACCAAATGGATGTGCTGGCCAAAGTGAGCAGAACAGTGAGAGGAATGAGGTGGAAAACAAAAATTGTGGATCATGAAGATGGCCCCCTTATTTCAGAAAAGGCGCTGTTTGCGGTTAAACAGTACTGGGTTGCTGGTGAAAACAATTCTACATCCACATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0008150 GO:0008152 GO:0008168 GO:0008757 GO:0012505 GO:0016020 GO:0016740 GO:0016741 GO:0031410 GO:0031982 GO:0031984 GO:0032259 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0097708 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Methyltransf_29

Protein Analysis

605

Amino Acids

68.68

Weight (kDa)

6.75

Isoelectric Point (pI)

35.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Methyltransf_29	PF03141	86 - 592	6.9e-221	Putative S-adenosyl-L-methionine-dependent methyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002417)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G26850 AT1G26850 AT1G26850
fragaria_vesca	FvH4_4g31440 FvH4_4g31440 FvH4_4g31440 FvH4_5g15080
malus_domestica	MD06G1192300.v1.1 MD13G1072700.v1.1 MD14G1198900.v1.1 MD16G1073500.v1.1
prunus_persica	Prupe.1G273400_v2.0.a1 Prupe.1G273400_v2.0.a1 Prupe.1G273400_v2.0.a1 Prupe.5G192000_v2.0.a1 Prupe.5G192000_v2.0.a1
pyrus_communis	pycom06g17040 pycom13g06520 pycom14g16510 pycom16g06360
rosa_chinensis	RchiOBHm_Chr4g0439921 RchiOBHm_Chr7g0181131
rosa_laevigata	RLG00000005211 RLG00000006225
rosa_multiflora	Rmu_sc0001147.1_g000019 Rmu_sc0022459.1_g000002
rosa_roxburghii	Rroxscaffold_3G00272250 Rroxscaffold_5G00380870
rosa_rugosa	Rorug04G0322400 Rorug04G0322500 Rorug06G0438700
rosa_samantha	Rh4AG373400 Rh4BG385700 Rh4CG400200 Rh4DG380000 Rh7AG040600 Rh7BG040000 Rh7CG042000 Rh7DG040400
rosa_wichuraiana	Rw4G031930 Rw7G003350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	444
AccB7I	CCANNNNNTGG	2 cut(s)	827, 1419
AciI	CCGC	3 cut(s)	940, 1187, 1769
AclWI	GGATC	5 cut(s)	867, 1067, 1252, 1626, 1734
AcoI	YGGCCR	1 cut(s)	1674
AfaI	GTAC	4 cut(s)	423, 845, 1121, 1781
AfiI	CCNNNNNNNGG	4 cut(s)	396, 518, 827, 1419
AflIII	ACRYGT	1 cut(s)	1303
AgsI	TTSAA	4 cut(s)	232, 485, 710, 1598
AhdI	GACNNNNNGTC	1 cut(s)	1164
AjnI	CCWGG	4 cut(s)	149, 874, 1097, 1252
AjuI	GAANNNNNNNTTGG	2 cut(s)	1445, 1477
AloI	GAACNNNNNNTCC	2 cut(s)	514, 546
AluBI	AGCT	9 cut(s)	65, 137, 569, 633, 766, 994, 1448, 1572, 1643
AluI	AGCT	9 cut(s)	65, 137, 569, 633, 766, 994, 1448, 1572, 1643
Alw26I	GTCTC	6 cut(s)	18, 74, 185, 681, 1151, 1264
AlwI	GGATC	5 cut(s)	867, 1067, 1252, 1626, 1734
Ama87I	CYCGRG	3 cut(s)	300, 511, 1154
AoxI	GGCC	6 cut(s)	401, 783, 941, 1631, 1674, 1738
ApeKI	GCWGC	6 cut(s)	103, 566, 766, 937, 1394, 1397
AseI	ATTAAT	1 cut(s)	1487
Asp700I	GAANNNNTTC	1 cut(s)	1602
AspLEI	GCGC	3 cut(s)	242, 439, 1762
AspS9I	GGNCC	5 cut(s)	402, 783, 899, 1323, 1739
AsuC2I	CCSGG	2 cut(s)	512, 513
AsuHPI	GGTGA	2 cut(s)	1037, 1805
AvaI	CYCGRG	3 cut(s)	300, 511, 1154
AvaII	GGWCC	2 cut(s)	899, 1323
AxyI	CCTNAGG	1 cut(s)	1635
BaeI	ACNNNNGTAYC	2 cut(s)	151, 184
BalI	TGGCCA	1 cut(s)	1676
BauI	CACGAG	1 cut(s)	336
BbvI	GCAGC	6 cut(s)	115, 578, 753, 949, 1381, 1384
BccI	CCATC	7 cut(s)	204, 830, 844, 1123, 1172, 1609, 1730
BceAI	ACGGC	2 cut(s)	396, 1646
BcgI	CGANNNNNNTGC	2 cut(s)	968, 1002
BciT130I	CCWGG	4 cut(s)	151, 876, 1099, 1254
BciVI	GTATCC	3 cut(s)	179, 1333, 1539
BclI	TGATCA	1 cut(s)	219
BcnI	CCSGG	2 cut(s)	512, 513
BcoDI	GTCTC	6 cut(s)	18, 74, 185, 681, 1151, 1264
BfaI	CTAG	1 cut(s)	780
BfmI	CTRYAG	2 cut(s)	163, 1263
BfoI	RGCGCY	1 cut(s)	1763
BfuI	GTATCC	3 cut(s)	179, 1333, 1539
BisI	GCNGC	8 cut(s)	104, 567, 767, 938, 941, 1188, 1395, 1398
BlsI	GCNGC	8 cut(s)	105, 568, 768, 939, 942, 1189, 1396, 1399
BmcAI	AGTACT	1 cut(s)	1781
Bme1390I	CCNGG	6 cut(s)	151, 512, 513, 876, 1099, 1254
Bme18I	GGWCC	2 cut(s)	899, 1323
BmeRI	GACNNNNNGTC	1 cut(s)	1164
BmeT110I	CYCGRG	3 cut(s)	300, 511, 1154
BmgT120I	GGNCC	5 cut(s)	402, 783, 899, 1323, 1739
BmiI	GGNNCC	3 cut(s)	404, 509, 1741
BmrFI	CCNGG	6 cut(s)	151, 512, 513, 876, 1099, 1254
BmrI	ACTGGG	2 cut(s)	895, 1792
BmsI	GCATC	1 cut(s)	535
BmuI	ACTGGG	2 cut(s)	895, 1792
BpmI	CTGGAG	2 cut(s)	934, 1275
BpuEI	CTTGAG	3 cut(s)	977, 1199, 1631
BpuMI	CCSGG	2 cut(s)	512, 513
Bsa29I	ATCGAT	1 cut(s)	255
BsaAI	YACGTR	1 cut(s)	1527
BsaI	GGTCTC	2 cut(s)	74, 185
BsaJI	CCNNGG	5 cut(s)	511, 579, 821, 1252, 1532
BsaWI	WCCGGW	1 cut(s)	1241
BsaXI	ACNNNNNCTCC	2 cut(s)	1135, 1165
Bsc4I	CCNNNNNNNGG	4 cut(s)	396, 518, 827, 1419
Bse1I	ACTGG	6 cut(s)	482, 619, 890, 917, 1057, 1787
Bse21I	CCTNAGG	1 cut(s)	1635
Bse3DI	GCAATG	2 cut(s)	355, 502
BseBI	CCWGG	4 cut(s)	151, 876, 1099, 1254
BseCI	ATCGAT	1 cut(s)	255
BseDI	CCNNGG	5 cut(s)	511, 579, 821, 1252, 1532
BseGI	GGATG	4 cut(s)	623, 1183, 1672, 1808
BseLI	CCNNNNNNNGG	4 cut(s)	396, 518, 827, 1419
BseMI	GCAATG	2 cut(s)	355, 502
BseMII	CTCAG	3 cut(s)	33, 1440, 1626
BseNI	ACTGG	6 cut(s)	482, 619, 890, 917, 1057, 1787
BseXI	GCAGC	6 cut(s)	115, 578, 753, 949, 1381, 1384
BseYI	CCCAGC	3 cut(s)	367, 633, 1002
Bsh1285I	CGRYCG	1 cut(s)	247
BshFI	GGCC	6 cut(s)	403, 785, 943, 1633, 1676, 1740
BshVI	ATCGAT	1 cut(s)	255
BsiEI	CGRYCG	1 cut(s)	247
BsiHKCI	CYCGRG	3 cut(s)	300, 511, 1154
BsiSI	CCGG	2 cut(s)	512, 1242
BslFI	GGGAC	1 cut(s)	1235
BslI	CCNNNNNNNGG	4 cut(s)	396, 518, 827, 1419
BsmAI	GTCTC	6 cut(s)	18, 74, 185, 681, 1151, 1264
BsmFI	GGGAC	1 cut(s)	1235
BsmI	GAATGC	3 cut(s)	1108, 1378, 1623
BsnI	GGCC	6 cut(s)	403, 785, 943, 1633, 1676, 1740
Bso31I	GGTCTC	2 cut(s)	74, 185
BsoBI	CYCGRG	3 cut(s)	300, 511, 1154
Bsp1407I	TGTACA	1 cut(s)	843
Bsp143I	GATC	8 cut(s)	219, 244, 859, 975, 1072, 1244, 1618, 1726
Bsp19I	CCATGG	2 cut(s)	579, 821
BspACI	CCGC	3 cut(s)	940, 1187, 1769
BspANI	GGCC	6 cut(s)	403, 785, 943, 1633, 1676, 1740
BspCNI	CTCAG	3 cut(s)	32, 1441, 1627
BspDI	ATCGAT	1 cut(s)	255
BspHI	TCATGA	6 cut(s)	271, 694, 1063, 1168, 1501, 1729
BspLI	GGNNCC	3 cut(s)	404, 509, 1741
BspMAI	CTGCAG	2 cut(s)	167, 1267
BspPI	GGATC	5 cut(s)	867, 1067, 1252, 1626, 1734
BspQI	GCTCTTC	1 cut(s)	957
BspTNI	GGTCTC	2 cut(s)	74, 185
BsrDI	GCAATG	2 cut(s)	355, 502
BsrGI	TGTACA	1 cut(s)	843
BsrI	ACTGG	6 cut(s)	482, 619, 890, 917, 1057, 1787
BssECI	CCNNGG	5 cut(s)	511, 579, 821, 1252, 1532
BssMI	GATC	8 cut(s)	219, 244, 859, 975, 1072, 1244, 1618, 1726
BssSI	CACGAG	1 cut(s)	336
BssT1I	CCWWGG	3 cut(s)	579, 821, 1532
Bst2BI	CACGAG	1 cut(s)	336
Bst2UI	CCWGG	4 cut(s)	151, 876, 1099, 1254
Bst4CI	ACNGT	8 cut(s)	237, 426, 457, 528, 803, 1419, 1693, 1779
Bst6I	CTCTTC	2 cut(s)	339, 957
BstAUI	TGTACA	1 cut(s)	843
BstBAI	YACGTR	1 cut(s)	1527
BstC8I	GCNNGC	3 cut(s)	285, 631, 1674
BstDEI	CTNAG	4 cut(s)	19, 869, 1449, 1635
BstDSI	CCRYGG	2 cut(s)	579, 821
BstF5I	GGATG	4 cut(s)	623, 1183, 1672, 1808
BstH2I	RGCGCY	1 cut(s)	1763
BstHHI	GCGC	3 cut(s)	242, 439, 1762
BstKTI	GATC	8 cut(s)	222, 247, 862, 978, 1075, 1247, 1621, 1729
BstMAI	GTCTC	6 cut(s)	18, 74, 185, 681, 1151, 1264
BstMBI	GATC	8 cut(s)	219, 244, 859, 975, 1072, 1244, 1618, 1726
BstMCI	CGRYCG	1 cut(s)	247
BstMWI	GCNNNNNNNGC	2 cut(s)	246, 1766
BstNI	CCWGG	4 cut(s)	151, 876, 1099, 1254
BstNSI	RCATGY	1 cut(s)	1307
BstSCI	CCNGG	6 cut(s)	149, 510, 511, 874, 1097, 1252
BstSFI	CTRYAG	2 cut(s)	163, 1263
BstV1I	GCAGC	6 cut(s)	115, 578, 753, 949, 1381, 1384
BstX2I	RGATCY	2 cut(s)	1072, 1244
BstYI	RGATCY	2 cut(s)	1072, 1244
Bsu15I	ATCGAT	1 cut(s)	255
Bsu36I	CCTNAGG	1 cut(s)	1635
BsuI	GTATCC	3 cut(s)	179, 1333, 1539
BsuRI	GGCC	6 cut(s)	403, 785, 943, 1633, 1676, 1740
BsuTUI	ATCGAT	1 cut(s)	255
BtgI	CCRYGG	2 cut(s)	579, 821
BtsCI	GGATG	4 cut(s)	623, 1183, 1672, 1808
BtsIMutI	CAGTG	3 cut(s)	612, 799, 1698
Cac8I	GCNNGC	3 cut(s)	285, 631, 1674
CciI	TCATGA	6 cut(s)	271, 694, 1063, 1168, 1501, 1729
CfoI	GCGC	3 cut(s)	242, 439, 1762
Cfr13I	GGNCC	5 cut(s)	402, 783, 899, 1323, 1739
Cfr9I	CCCGGG	1 cut(s)	511
ClaI	ATCGAT	1 cut(s)	255
CsiI	ACCWGGT	1 cut(s)	874
Csp6I	GTAC	4 cut(s)	422, 844, 1120, 1780
CspCI	CAANNNNNGTGG	2 cut(s)	1704, 1739
CviQI	GTAC	4 cut(s)	422, 844, 1120, 1780
DdeI	CTNAG	4 cut(s)	19, 869, 1449, 1635
DpnI	GATC	8 cut(s)	221, 246, 861, 977, 1074, 1246, 1620, 1728
DpnII	GATC	8 cut(s)	219, 244, 859, 975, 1072, 1244, 1618, 1726
DraI	TTTAAA	1 cut(s)	652
DriI	GACNNNNNGTC	1 cut(s)	1164
EaeI	YGGCCR	1 cut(s)	1674
Eam1104I	CTCTTC	2 cut(s)	339, 957
Eam1105I	GACNNNNNGTC	1 cut(s)	1164
EarI	CTCTTC	2 cut(s)	339, 957
Eco130I	CCWWGG	3 cut(s)	579, 821, 1532
Eco31I	GGTCTC	2 cut(s)	74, 185
Eco32I	GATATC	1 cut(s)	48
Eco47I	GGWCC	2 cut(s)	899, 1323
Eco81I	CCTNAGG	1 cut(s)	1635
Eco88I	CYCGRG	3 cut(s)	300, 511, 1154
EcoO109I	RGGNCCY	1 cut(s)	783
EcoRII	CCWGG	4 cut(s)	149, 874, 1097, 1252
EcoRV	GATATC	1 cut(s)	48
EcoT14I	CCWWGG	3 cut(s)	579, 821, 1532
EcoT22I	ATGCAT	1 cut(s)	550
ErhI	CCWWGG	3 cut(s)	579, 821, 1532
FalI	AAGNNNNNCTT	4 cut(s)	939, 971, 1590, 1622
FaqI	GGGAC	1 cut(s)	1235
FauNDI	CATATG	2 cut(s)	1037, 1540
FbaI	TGATCA	1 cut(s)	219
Fnu4HI	GCNGC	8 cut(s)	104, 567, 767, 938, 941, 1188, 1395, 1398
FokI	GGATG	4 cut(s)	630, 1190, 1679, 1795
Fsp4HI	GCNGC	8 cut(s)	104, 567, 767, 938, 941, 1188, 1395, 1398
FspBI	CTAG	1 cut(s)	780
GlaI	GCGC	3 cut(s)	241, 438, 1761
GluI	GCNGC	8 cut(s)	104, 567, 767, 938, 941, 1188, 1395, 1398
GsaI	CCCAGC	3 cut(s)	371, 637, 1006
GsuI	CTGGAG	2 cut(s)	934, 1275
HaeII	RGCGCY	1 cut(s)	1763
HaeIII	GGCC	6 cut(s)	403, 785, 943, 1633, 1676, 1740
HapII	CCGG	2 cut(s)	512, 1242
HhaI	GCGC	3 cut(s)	242, 439, 1762
Hin6I	GCGC	3 cut(s)	240, 437, 1760
HinP1I	GCGC	3 cut(s)	240, 437, 1760
HindIII	AAGCTT	1 cut(s)	992
HinfI	GANTC	7 cut(s)	481, 574, 689, 1094, 1257, 1406, 1467
HpaII	CCGG	2 cut(s)	512, 1242
HphI	GGTGA	2 cut(s)	1037, 1805
Hpy188I	TCNGA	3 cut(s)	183, 474, 1753
HpyAV	CCTTC	8 cut(s)	206, 457, 786, 1015, 1158, 1236, 1341, 1528
HpyCH4III	ACNGT	8 cut(s)	237, 426, 457, 528, 803, 1419, 1693, 1779
HpyCH4IV	ACGT	1 cut(s)	1526
HpyF10VI	GCNNNNNNNGC	2 cut(s)	246, 1766
HpyF3I	CTNAG	4 cut(s)	19, 869, 1449, 1635
HpySE526I	ACGT	1 cut(s)	1526
HspAI	GCGC	3 cut(s)	240, 437, 1760
Ksp22I	TGATCA	1 cut(s)	219
Kzo9I	GATC	8 cut(s)	219, 244, 859, 975, 1072, 1244, 1618, 1726
LguI	GCTCTTC	1 cut(s)	957
LmnI	GCTCC	2 cut(s)	539, 1640
Lsp1109I	GCAGC	6 cut(s)	115, 578, 753, 949, 1381, 1384
LweI	GCATC	1 cut(s)	535
MabI	ACCWGGT	1 cut(s)	874
MaeI	CTAG	1 cut(s)	780
MaeII	ACGT	1 cut(s)	1526
MaeIII	GTNAC	4 cut(s)	385, 413, 881, 1655
MalI	GATC	8 cut(s)	221, 246, 861, 977, 1074, 1246, 1620, 1728
MboI	GATC	8 cut(s)	219, 244, 859, 975, 1072, 1244, 1618, 1726
MflI	RGATCY	2 cut(s)	1072, 1244
MlsI	TGGCCA	1 cut(s)	1676
MluNI	TGGCCA	1 cut(s)	1676
MlyI	GAGTC	3 cut(s)	683, 1266, 1476
MmeI	TCCRAC	1 cut(s)	1317
Mox20I	TGGCCA	1 cut(s)	1676
Mph1103I	ATGCAT	1 cut(s)	550
MroXI	GAANNNNTTC	1 cut(s)	1602
MscI	TGGCCA	1 cut(s)	1676
MseI	TTAA	4 cut(s)	651, 909, 1487, 1773
MslI	CAYNNNNRTG	4 cut(s)	137, 1308, 1557, 1734
Msp20I	TGGCCA	1 cut(s)	1676
MspA1I	CMGCKG	3 cut(s)	569, 633, 940
MspI	CCGG	2 cut(s)	512, 1242
MspR9I	CCNGG	6 cut(s)	151, 512, 513, 876, 1099, 1254
Mva1269I	GAATGC	3 cut(s)	1108, 1378, 1623
MvaI	CCWGG	4 cut(s)	151, 876, 1099, 1254
MwoI	GCNNNNNNNGC	2 cut(s)	246, 1766
NciI	CCSGG	2 cut(s)	512, 513
NcoI	CCATGG	2 cut(s)	579, 821
NdeI	CATATG	2 cut(s)	1037, 1540
NdeII	GATC	8 cut(s)	219, 244, 859, 975, 1072, 1244, 1618, 1726
NlaIV	GGNNCC	3 cut(s)	404, 509, 1741
NmuCI	GTSAC	3 cut(s)	385, 413, 1655
NsiI	ATGCAT	1 cut(s)	550
NspI	RCATGY	1 cut(s)	1307
PagI	TCATGA	6 cut(s)	271, 694, 1063, 1168, 1501, 1729
PciI	ACATGT	1 cut(s)	1303
PciSI	GCTCTTC	1 cut(s)	957
PctI	GAATGC	3 cut(s)	1108, 1378, 1623
PdmI	GAANNNNTTC	1 cut(s)	1602
PfeI	GAWTC	4 cut(s)	481, 574, 1094, 1406
PflFI	GACNNNGTC	1 cut(s)	330
PflMI	CCANNNNNTGG	2 cut(s)	827, 1419
PfoI	TCCNGGA	1 cut(s)	1097
PkrI	GCNGC	8 cut(s)	105, 568, 768, 939, 942, 1189, 1396, 1399
Ple19I	CGATCG	1 cut(s)	247
PleI	GAGTC	3 cut(s)	683, 1265, 1475
PpsI	GAGTC	3 cut(s)	683, 1265, 1475
Ppu21I	YACGTR	1 cut(s)	1527
PscI	ACATGT	1 cut(s)	1303
PshBI	ATTAAT	1 cut(s)	1487
PsiI	TTATAA	1 cut(s)	444
Psp6I	CCWGG	4 cut(s)	149, 874, 1097, 1252
PspFI	CCCAGC	3 cut(s)	367, 633, 1002
PspGI	CCWGG	4 cut(s)	149, 874, 1097, 1252
PspN4I	GGNNCC	3 cut(s)	404, 509, 1741
PspPI	GGNCC	5 cut(s)	402, 783, 899, 1323, 1739
PstI	CTGCAG	2 cut(s)	167, 1267
PsuI	RGATCY	2 cut(s)	1072, 1244
PsyI	GACNNNGTC	1 cut(s)	330
PvuI	CGATCG	1 cut(s)	247
PvuII	CAGCTG	2 cut(s)	569, 633
RsaI	GTAC	4 cut(s)	423, 845, 1121, 1781
RsaNI	GTAC	4 cut(s)	422, 844, 1120, 1780
RseI	CAYNNNNRTG	4 cut(s)	137, 1308, 1557, 1734
SapI	GCTCTTC	1 cut(s)	957
SaqAI	TTAA	4 cut(s)	651, 909, 1487, 1773
SatI	GCNGC	8 cut(s)	104, 567, 767, 938, 941, 1188, 1395, 1398
Sau3AI	GATC	8 cut(s)	219, 244, 859, 975, 1072, 1244, 1618, 1726
Sau96I	GGNCC	5 cut(s)	402, 783, 899, 1323, 1739
ScaI	AGTACT	1 cut(s)	1781
SchI	GAGTC	3 cut(s)	683, 1266, 1476
ScrFI	CCNGG	6 cut(s)	151, 512, 513, 876, 1099, 1254
SexAI	ACCWGGT	1 cut(s)	874
SfaNI	GCATC	1 cut(s)	535
SfcI	CTRYAG	2 cut(s)	163, 1263
SinI	GGWCC	2 cut(s)	899, 1323
SmaI	CCCGGG	1 cut(s)	513
SmiMI	CAYNNNNRTG	4 cut(s)	137, 1308, 1557, 1734
SmlI	CTYRAG	3 cut(s)	956, 1214, 1610
SmoI	CTYRAG	3 cut(s)	956, 1214, 1610
SsiI	CCGC	3 cut(s)	940, 1187, 1769
SspI	AATATT	1 cut(s)	1360
SspMI	CTAG	1 cut(s)	780
StyD4I	CCNGG	6 cut(s)	149, 510, 511, 874, 1097, 1252
StyI	CCWWGG	3 cut(s)	579, 821, 1532
TaaI	ACNGT	8 cut(s)	237, 426, 457, 528, 803, 1419, 1693, 1779
TaiI	ACGT	1 cut(s)	1529
TaqI	TCGA	6 cut(s)	37, 44, 255, 862, 978, 1275
TatI	WGTACW	2 cut(s)	843, 1779
TauI	GCSGC	2 cut(s)	943, 1190
TfiI	GAWTC	4 cut(s)	481, 574, 1094, 1406
Tru1I	TTAA	4 cut(s)	651, 909, 1487, 1773
Tru9I	TTAA	4 cut(s)	651, 909, 1487, 1773
TscAI	CASTG	3 cut(s)	619, 806, 1698
TseFI	GTSAC	3 cut(s)	385, 413, 1655
TseI	GCWGC	6 cut(s)	103, 566, 766, 937, 1394, 1397
Tsp45I	GTSAC	3 cut(s)	385, 413, 1655
TspDTI	ATGAA	9 cut(s)	46, 225, 326, 573, 711, 1385, 1442, 1541, 1746
TspGWI	ACGGA	1 cut(s)	216
TspMI	CCCGGG	1 cut(s)	511
TspRI	CASTG	3 cut(s)	619, 806, 1698
Tth111I	GACNNNGTC	1 cut(s)	330
Van91I	CCANNNNNTGG	2 cut(s)	827, 1419
VpaK11BI	GGWCC	2 cut(s)	899, 1323
VspI	ATTAAT	1 cut(s)	1487
XceI	RCATGY	1 cut(s)	1307
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1333
XmaI	CCCGGG	1 cut(s)	511
XmnI	GAANNNNTTC	1 cut(s)	1602
XspI	CTAG	1 cut(s)	780
ZrmI	AGTACT	1 cut(s)	1781
Zsp2I	ATGCAT	1 cut(s)	550

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.