Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4D

Orthogroup ID

OG0002417

Physical Location & Seq

Genomic Coordinates Forward (+)

59801180 .. 59806350

Gene Structure 5171 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4DG380000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1605 bp

ATGGCTACGAAAAGTAACGCCGATGGGCGGACTAGGGGTTCTGTACAGATTTTTATTGTAGCTGGTTTGTGCTGTTTTTTCTATATATTGGGGGCTTGGCAGAGGAGTGGTTTTGGGAAGGGGGACAGCATTGCTTTAGAGATTACTAAGACTAAGGCCGACTGCAGTATAATTCCGAGTCTAAGTTTTGAATCTCATCATGCCGGTGAAGCTGGGAAGATTGATGAGTCTGATTCCAAGCCCAAAGTGTTTGAACCTTGTCATCCTCGTTACACTGATTACACGCCATGCCAAGATCAAAAGCGAGCAATGACATTTCCGAGAGAGGATATGAATTATCGAGAGAGGCATTGCCCTCCCGAGGAAGAAAAGTTGCATTGCCTCATTCCGGCACCAAAGGGATATGTAACTCCGTTCCCCTGGCCTAAGAGCCGTGACTATGTGCCGTATGCAAATGCACCGTATAAGAGCTTGACTGTTGAGAAGGCTGTCCAGAACTGGATCCAGTATGAGGGTAATGTATTTAGATTCCCTGGCGGGGGAACACAGTTTCCTCAAGGGGCAGATAAATACATTGATCAGCTTGCTTCGGTGATACCAATTAAGAATGGCACGGTTAGAACTGCGCTGGACACTGGTTGTGGGGTTGCTAGTTGGGGTGCGTATTTGTTGAGTAGAGATGTTATTGCCATGTCATTTGCACCAAGAGATTCACATGAAGCACAGGTACAATTTGCTCTTGAAAGGGGTGTACCTGCAGTAATTGGTGTTCTGGGGACAATAAAGCTGCCATATCCATCCAGAGCCTTTGACATGGCTCACTGTTCACGTTGCTTAATTCCATGGGGAGTAAATGATGGAAAATATCTCATGGAAGTTGACCGAGTCCTTAGGCCTGGGGGATATTGGGTTCTTTCGGGTCCCCCCATCAATTGGAAGAATAACTACAAATCATGGCAGCGTCCCAGGGAGGAACTTGAGGAGGAACAGAGAAAGATTGAAGAAGTTGCTAAACTTCTATGCTGGGAGAAGAAGTCTGAGAAGGGTGAAACCGCCATTTGGCAGAAGAGGGTGAATTCTGATTCATGCAGCAGCAGACAAGATGACTCCCGAGCTACCTTTTGCAACTCTAATGAAGCAGATGATGTCTGGTATAAGAAAATGGAGGGATGTATAACTCCATATCCTGACGAAGTTGGTGGAGAACTGAAGCCATTTCCTGAAAGGCTTCATGCTGTACCACCTAGAATTGCTAGTGGATCGGTTCCTGGAGTTTCTGTTGACTCCTACCTGGAGGATAACAACAAATGGAAGAAGCATGTTAGTGCTTATAAAAGAATCAACAAACTAATTGACTCTGGAAGGTATCGCAACGTAATGGATATGAATGCTGGTTTGGGTGGTTTTGCTGCAGCACTTACATCTCCAAAATTGTGGGTCATGAATGTGTTGCCCACTATAGCTGAGAAAAATACATTAGGTGCTGTATATGAGCGAGGATTGATCGGAATCTATCACGACTGGTGCGAAGGTTTCTCCACATACCCAAGGACATATGATCTCATTCATGCCTATGGTGTTTTGAGTTTGTACAATGGCAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0008150 GO:0008152 GO:0008168 GO:0008757 GO:0012505 GO:0016020 GO:0016740 GO:0016741 GO:0031410 GO:0031982 GO:0031984 GO:0032259 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0097708 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Methyltransf_29

Protein Analysis

534

Amino Acids

60.04

Weight (kDa)

8.22

Isoelectric Point (pI)

34.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Methyltransf_29	PF03141	93 - 532	5.3e-201	Putative S-adenosyl-L-methionine-dependent methyltransferase
Methyltransf_11	PF08241	210 - 304	5.7e-06	Methyltransferase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002417)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G26850 AT1G26850 AT1G26850
fragaria_vesca	FvH4_4g31440 FvH4_4g31440 FvH4_4g31440 FvH4_5g15080
malus_domestica	MD06G1192300.v1.1 MD13G1072700.v1.1 MD14G1198900.v1.1 MD16G1073500.v1.1
prunus_persica	Prupe.1G273400_v2.0.a1 Prupe.1G273400_v2.0.a1 Prupe.1G273400_v2.0.a1 Prupe.5G192000_v2.0.a1 Prupe.5G192000_v2.0.a1
pyrus_communis	pycom06g17040 pycom13g06520 pycom14g16510 pycom16g06360
rosa_chinensis	RchiOBHm_Chr4g0439921 RchiOBHm_Chr7g0181131
rosa_laevigata	RLG00000005211 RLG00000006225
rosa_multiflora	Rmu_sc0001147.1_g000019 Rmu_sc0022459.1_g000002
rosa_roxburghii	Rroxscaffold_3G00272250 Rroxscaffold_5G00380870
rosa_rugosa	Rorug04G0322400 Rorug04G0322500 Rorug06G0438700
rosa_samantha	Rh4AG373400 Rh4BG385700 Rh4CG400200 Rh4DG380000 Rh7AG040600 Rh7BG040000 Rh7CG042000 Rh7DG040400
rosa_wichuraiana	Rw4G031930 Rw7G003350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1332
Acc36I	ACCTGC	1 cut(s)	763
AccB1I	GGYRCC	1 cut(s)	391
AccB7I	CCANNNNNTGG	1 cut(s)	933
AciI	CCGC	3 cut(s)	28, 537, 1053
AclWI	GGATC	3 cut(s)	496, 509, 1267
AcsI	RAATTY	1 cut(s)	1075
AcuI	CTGAAG	1 cut(s)	1229
AfaI	GTAC	5 cut(s)	45, 729, 753, 1239, 1592
AfiI	CCNNNNNNNGG	8 cut(s)	27, 361, 388, 511, 538, 539, 933, 1059
AgsI	TTSAA	4 cut(s)	191, 254, 743, 1001
AjnI	CCWGG	6 cut(s)	419, 532, 895, 965, 1267, 1290
AjuI	GAANNNNNNNTTGG	2 cut(s)	1379, 1411
AloI	GAACNNNNNNTCC	6 cut(s)	22, 54, 535, 567, 894, 926
AluBI	AGCT	7 cut(s)	62, 212, 471, 583, 787, 1115, 1463
AluI	AGCT	7 cut(s)	62, 212, 471, 583, 787, 1115, 1463
AlwI	GGATC	3 cut(s)	496, 509, 1267
Ama87I	CYCGRG	2 cut(s)	359, 1110
AoxI	GGCC	3 cut(s)	156, 422, 893
ApeKI	GCWGC	6 cut(s)	787, 958, 1089, 1092, 1409, 1412
ApoI	RAATTY	1 cut(s)	1075
Asp700I	GAANNNNTTC	1 cut(s)	1227
AspLEI	GCGC	1 cut(s)	628
AspS9I	GGNCC	1 cut(s)	920
AsuHPI	GGTGA	4 cut(s)	218, 604, 1058, 1084
AvaI	CYCGRG	2 cut(s)	359, 1110
AvaII	GGWCC	1 cut(s)	920
AxyI	CCTNAGG	1 cut(s)	890
BamHI	GGATCC	1 cut(s)	501
BanI	GGYRCC	1 cut(s)	391
BarI	GAAGNNNNNNTAC	4 cut(s)	711, 743, 929, 961
BbvI	GCAGC	6 cut(s)	774, 970, 1101, 1104, 1396, 1424
BccI	CCATC	4 cut(s)	17, 805, 851, 935
BceAI	ACGGC	2 cut(s)	417, 430
BciT130I	CCWGG	6 cut(s)	421, 534, 897, 967, 1269, 1292
BclI	TGATCA	1 cut(s)	577
BfaI	CTAG	4 cut(s)	33, 651, 1245, 1254
BfmI	CTRYAG	4 cut(s)	163, 756, 1410, 1458
BfuAI	ACCTGC	1 cut(s)	763
BisI	GCNGC	6 cut(s)	788, 959, 1090, 1093, 1410, 1413
BlsI	GCNGC	6 cut(s)	789, 960, 1091, 1094, 1411, 1414
Bme1390I	CCNGG	6 cut(s)	421, 534, 897, 967, 1269, 1292
Bme18I	GGWCC	1 cut(s)	920
BmeT110I	CYCGRG	2 cut(s)	359, 1110
BmgT120I	GGNCC	1 cut(s)	920
BmiI	GGNNCC	5 cut(s)	393, 503, 921, 922, 1266
BmrFI	CCNGG	6 cut(s)	421, 534, 897, 967, 1269, 1292
BpmI	CTGGAG	2 cut(s)	1290, 1313
BpuEI	CTTGAG	2 cut(s)	540, 998
BsaBI	GATNNNNATC	1 cut(s)	1508
BsaJI	CCNNGG	8 cut(s)	360, 419, 532, 842, 896, 965, 966, 1547
BsaXI	ACNNNNNCTCC	4 cut(s)	1019, 1049, 1263, 1293
Bsc4I	CCNNNNNNNGG	8 cut(s)	27, 361, 388, 511, 538, 539, 933, 1059
Bse118I	RCCGGY	1 cut(s)	203
Bse1I	ACTGG	4 cut(s)	503, 505, 640, 1526
Bse21I	CCTNAGG	1 cut(s)	890
Bse3DI	GCAATG	4 cut(s)	129, 315, 349, 376
Bse8I	GATNNNNATC	1 cut(s)	1508
BseBI	CCWGG	6 cut(s)	421, 534, 897, 967, 1269, 1292
BseDI	CCNNGG	8 cut(s)	360, 419, 532, 842, 896, 965, 966, 1547
BseGI	GGATG	3 cut(s)	262, 797, 1175
BseJI	GATNNNNATC	1 cut(s)	1508
BseLI	CCNNNNNNNGG	8 cut(s)	27, 361, 388, 511, 538, 539, 933, 1059
BseMI	GCAATG	4 cut(s)	129, 315, 349, 376
BseMII	CTCAG	2 cut(s)	1029, 1455
BseNI	ACTGG	4 cut(s)	503, 505, 640, 1526
BseRI	GAGGAG	2 cut(s)	118, 995
BseXI	GCAGC	6 cut(s)	774, 970, 1101, 1104, 1396, 1424
BseYI	CCCAGC	2 cut(s)	212, 1023
BshFI	GGCC	3 cut(s)	158, 424, 895
BshNI	GGYRCC	1 cut(s)	391
BsiHKCI	CYCGRG	2 cut(s)	359, 1110
BsiSI	CCGG	2 cut(s)	204, 389
BslFI	GGGAC	4 cut(s)	137, 790, 906, 948
BslI	CCNNNNNNNGG	8 cut(s)	27, 361, 388, 511, 538, 539, 933, 1059
BsmFI	GGGAC	4 cut(s)	137, 790, 906, 948
BsmI	GAATGC	1 cut(s)	1393
BsnI	GGCC	3 cut(s)	158, 424, 895
BsoBI	CYCGRG	2 cut(s)	359, 1110
Bsp1407I	TGTACA	2 cut(s)	43, 1590
Bsp143I	GATC	6 cut(s)	295, 501, 577, 1259, 1503, 1558
Bsp19I	CCATGG	1 cut(s)	842
BspACI	CCGC	3 cut(s)	28, 537, 1053
BspANI	GGCC	3 cut(s)	158, 424, 895
BspCNI	CTCAG	2 cut(s)	1030, 1456
BspHI	TCATGA	1 cut(s)	1440
BspLI	GGNNCC	5 cut(s)	393, 503, 921, 922, 1266
BspMAI	CTGCAG	3 cut(s)	167, 760, 1414
BspMI	ACCTGC	1 cut(s)	763
BspPI	GGATC	3 cut(s)	496, 509, 1267
BspT107I	GGYRCC	1 cut(s)	391
BsrDI	GCAATG	4 cut(s)	129, 315, 349, 376
BsrFI	RCCGGY	1 cut(s)	203
BsrGI	TGTACA	2 cut(s)	43, 1590
BsrI	ACTGG	4 cut(s)	503, 505, 640, 1526
BssAI	RCCGGY	1 cut(s)	203
BssECI	CCNNGG	8 cut(s)	360, 419, 532, 842, 896, 965, 966, 1547
BssMI	GATC	6 cut(s)	295, 501, 577, 1259, 1503, 1558
BssT1I	CCWWGG	2 cut(s)	842, 1547
Bst2UI	CCWGG	6 cut(s)	421, 534, 897, 967, 1269, 1292
Bst4CI	ACNGT	5 cut(s)	462, 478, 549, 616, 824
Bst6I	CTCTTC	1 cut(s)	1061
BstAUI	TGTACA	2 cut(s)	43, 1590
BstC8I	GCNNGC	2 cut(s)	306, 585
BstDEI	CTNAG	7 cut(s)	147, 153, 182, 426, 890, 1038, 1464
BstDSI	CCRYGG	1 cut(s)	842
BstF5I	GGATG	3 cut(s)	262, 797, 1175
BstHHI	GCGC	1 cut(s)	628
BstKTI	GATC	6 cut(s)	298, 504, 580, 1262, 1506, 1561
BstMBI	GATC	6 cut(s)	295, 501, 577, 1259, 1503, 1558
BstMWI	GCNNNNNNNGC	1 cut(s)	209
BstNI	CCWGG	6 cut(s)	421, 534, 897, 967, 1269, 1292
BstNSI	RCATGY	1 cut(s)	1322
BstSCI	CCNGG	6 cut(s)	419, 532, 895, 965, 1267, 1290
BstSFI	CTRYAG	4 cut(s)	163, 756, 1410, 1458
BstV1I	GCAGC	6 cut(s)	774, 970, 1101, 1104, 1396, 1424
BstX2I	RGATCY	1 cut(s)	501
BstXI	CCANNNNNNTGG	1 cut(s)	1434
BstYI	RGATCY	1 cut(s)	501
Bsu36I	CCTNAGG	1 cut(s)	890
BsuRI	GGCC	3 cut(s)	158, 424, 895
BtgI	CCRYGG	1 cut(s)	842
BtsCI	GGATG	3 cut(s)	262, 797, 1175
BtsIMutI	CAGTG	3 cut(s)	273, 633, 820
BveI	ACCTGC	1 cut(s)	763
Cac8I	GCNNGC	2 cut(s)	306, 585
CciI	TCATGA	1 cut(s)	1440
CfoI	GCGC	1 cut(s)	628
Cfr10I	RCCGGY	1 cut(s)	203
Cfr13I	GGNCC	1 cut(s)	920
CseI	GACGC	1 cut(s)	950
Csp6I	GTAC	5 cut(s)	44, 728, 752, 1238, 1591
CviQI	GTAC	5 cut(s)	44, 728, 752, 1238, 1591
DdeI	CTNAG	7 cut(s)	147, 153, 182, 426, 890, 1038, 1464
DpnI	GATC	6 cut(s)	297, 503, 579, 1261, 1505, 1560
DpnII	GATC	6 cut(s)	295, 501, 577, 1259, 1503, 1558
Eam1104I	CTCTTC	1 cut(s)	1061
EarI	CTCTTC	1 cut(s)	1061
EciI	GGCGGA	1 cut(s)	43
Eco130I	CCWWGG	2 cut(s)	842, 1547
Eco147I	AGGCCT	1 cut(s)	895
Eco47I	GGWCC	1 cut(s)	920
Eco57I	CTGAAG	1 cut(s)	1229
Eco81I	CCTNAGG	1 cut(s)	890
Eco88I	CYCGRG	2 cut(s)	359, 1110
EcoO109I	RGGNCCY	1 cut(s)	920
EcoRI	GAATTC	1 cut(s)	1075
EcoRII	CCWGG	6 cut(s)	419, 532, 895, 965, 1267, 1290
EcoT14I	CCWWGG	2 cut(s)	842, 1547
ErhI	CCWWGG	2 cut(s)	842, 1547
FaqI	GGGAC	4 cut(s)	137, 790, 906, 948
FauI	CCCGC	1 cut(s)	530
FauNDI	CATATG	1 cut(s)	1555
FbaI	TGATCA	1 cut(s)	577
Fnu4HI	GCNGC	6 cut(s)	788, 959, 1090, 1093, 1410, 1413
FokI	GGATG	3 cut(s)	249, 784, 1182
Fsp4HI	GCNGC	6 cut(s)	788, 959, 1090, 1093, 1410, 1413
FspBI	CTAG	4 cut(s)	33, 651, 1245, 1254
GlaI	GCGC	1 cut(s)	627
GluI	GCNGC	6 cut(s)	788, 959, 1090, 1093, 1410, 1413
GsaI	CCCAGC	2 cut(s)	216, 1027
GsuI	CTGGAG	2 cut(s)	1290, 1313
HaeIII	GGCC	3 cut(s)	158, 424, 895
HapII	CCGG	2 cut(s)	204, 389
HgaI	GACGC	1 cut(s)	950
HhaI	GCGC	1 cut(s)	628
Hin6I	GCGC	1 cut(s)	626
HinP1I	GCGC	1 cut(s)	626
HincII	GTYRAC	2 cut(s)	880, 1282
HindII	GTYRAC	2 cut(s)	880, 1282
HpaII	CCGG	2 cut(s)	204, 389
HphI	GGTGA	4 cut(s)	218, 604, 1058, 1084
Hpy166II	GTNNAC	4 cut(s)	752, 827, 880, 1282
Hpy188I	TCNGA	6 cut(s)	177, 232, 321, 1039, 1081, 1508
Hpy8I	GTNNAC	4 cut(s)	752, 827, 880, 1282
HpyAV	CCTTC	5 cut(s)	112, 478, 1036, 1356, 1523
HpyCH4III	ACNGT	5 cut(s)	462, 478, 549, 616, 824
HpyCH4IV	ACGT	2 cut(s)	829, 1374
HpyCH4V	TGCA	9 cut(s)	165, 376, 452, 458, 701, 758, 1089, 1125, 1412
HpyF10VI	GCNNNNNNNGC	1 cut(s)	209
HpyF3I	CTNAG	7 cut(s)	147, 153, 182, 426, 890, 1038, 1464
HpySE526I	ACGT	2 cut(s)	829, 1374
HspAI	GCGC	1 cut(s)	626
KflI	GGGWCCC	1 cut(s)	920
Ksp22I	TGATCA	1 cut(s)	577
Kzo9I	GATC	6 cut(s)	295, 501, 577, 1259, 1503, 1558
Lsp1109I	GCAGC	6 cut(s)	774, 970, 1101, 1104, 1396, 1424
MaeI	CTAG	4 cut(s)	33, 651, 1245, 1254
MaeII	ACGT	2 cut(s)	829, 1374
MaeIII	GTNAC	4 cut(s)	14, 269, 406, 434
MalI	GATC	6 cut(s)	297, 503, 579, 1261, 1505, 1560
MboI	GATC	6 cut(s)	295, 501, 577, 1259, 1503, 1558
MboII	GAAGA	7 cut(s)	229, 377, 949, 1013, 1042, 1078, 1324
MfeI	CAATTG	1 cut(s)	931
MflI	RGATCY	1 cut(s)	501
MlyI	GAGTC	6 cut(s)	187, 236, 894, 1100, 1277, 1349
MroXI	GAANNNNTTC	1 cut(s)	1227
MseI	TTAA	2 cut(s)	603, 836
MslI	CAYNNNNRTG	4 cut(s)	204, 1323, 1445, 1572
MspI	CCGG	2 cut(s)	204, 389
MspR9I	CCNGG	6 cut(s)	421, 534, 897, 967, 1269, 1292
MunI	CAATTG	1 cut(s)	931
Mva1269I	GAATGC	1 cut(s)	1393
MvaI	CCWGG	6 cut(s)	421, 534, 897, 967, 1269, 1292
MwoI	GCNNNNNNNGC	1 cut(s)	209
NcoI	CCATGG	1 cut(s)	842
NdeI	CATATG	1 cut(s)	1555
NdeII	GATC	6 cut(s)	295, 501, 577, 1259, 1503, 1558
NlaIV	GGNNCC	5 cut(s)	393, 503, 921, 922, 1266
NmuCI	GTSAC	1 cut(s)	434
NspI	RCATGY	1 cut(s)	1322
PagI	TCATGA	1 cut(s)	1440
PasI	CCCWGGG	1 cut(s)	966
PceI	AGGCCT	1 cut(s)	895
PcsI	WCGNNNNNNNCGW	1 cut(s)	1524
PctI	GAATGC	1 cut(s)	1393
PdmI	GAANNNNTTC	1 cut(s)	1227
PfeI	GAWTC	7 cut(s)	191, 233, 528, 710, 1082, 1338, 1509
PflFI	GACNNNGTC	1 cut(s)	884
PflMI	CCANNNNNTGG	1 cut(s)	933
PfoI	TCCNGGA	1 cut(s)	1267
PkrI	GCNGC	6 cut(s)	789, 960, 1091, 1094, 1411, 1414
PleI	GAGTC	6 cut(s)	186, 235, 893, 1100, 1277, 1349
PpsI	GAGTC	6 cut(s)	186, 235, 893, 1100, 1277, 1349
PpuMI	RGGWCCY	1 cut(s)	920
PsiI	TTATAA	1 cut(s)	1332
Psp5II	RGGWCCY	1 cut(s)	920
Psp6I	CCWGG	6 cut(s)	419, 532, 895, 965, 1267, 1290
PspFI	CCCAGC	2 cut(s)	212, 1023
PspGI	CCWGG	6 cut(s)	419, 532, 895, 965, 1267, 1290
PspN4I	GGNNCC	5 cut(s)	393, 503, 921, 922, 1266
PspPI	GGNCC	1 cut(s)	920
PspPPI	RGGWCCY	1 cut(s)	920
PsrI	GAACNNNNNNTAC	2 cut(s)	753, 785
PstI	CTGCAG	3 cut(s)	167, 760, 1414
PsuI	RGATCY	1 cut(s)	501
PsyI	GACNNNGTC	1 cut(s)	884
RsaI	GTAC	5 cut(s)	45, 729, 753, 1239, 1592
RsaNI	GTAC	5 cut(s)	44, 728, 752, 1238, 1591
RseI	CAYNNNNRTG	4 cut(s)	204, 1323, 1445, 1572
SaqAI	TTAA	2 cut(s)	603, 836
SatI	GCNGC	6 cut(s)	788, 959, 1090, 1093, 1410, 1413
Sau3AI	GATC	6 cut(s)	295, 501, 577, 1259, 1503, 1558
Sau96I	GGNCC	1 cut(s)	920
SchI	GAGTC	6 cut(s)	187, 236, 894, 1100, 1277, 1349
ScrFI	CCNGG	6 cut(s)	421, 534, 897, 967, 1269, 1292
SfcI	CTRYAG	4 cut(s)	163, 756, 1410, 1458
SinI	GGWCC	1 cut(s)	920
SmiMI	CAYNNNNRTG	4 cut(s)	204, 1323, 1445, 1572
SmlI	CTYRAG	2 cut(s)	555, 977
SmoI	CTYRAG	2 cut(s)	555, 977
SseBI	AGGCCT	1 cut(s)	895
SsiI	CCGC	3 cut(s)	28, 537, 1053
SspMI	CTAG	4 cut(s)	33, 651, 1245, 1254
StuI	AGGCCT	1 cut(s)	895
StyD4I	CCNGG	6 cut(s)	419, 532, 895, 965, 1267, 1290
StyI	CCWWGG	2 cut(s)	842, 1547
TaaI	ACNGT	5 cut(s)	462, 478, 549, 616, 824
TaiI	ACGT	2 cut(s)	832, 1377
TaqI	TCGA	1 cut(s)	340
TaqII	GACCGA	1 cut(s)	897
TatI	WGTACW	2 cut(s)	43, 1590
TfiI	GAWTC	7 cut(s)	191, 233, 528, 710, 1082, 1338, 1509
Tru1I	TTAA	2 cut(s)	603, 836
Tru9I	TTAA	2 cut(s)	603, 836
TscAI	CASTG	3 cut(s)	280, 640, 827
TseFI	GTSAC	1 cut(s)	434
TseI	GCWGC	6 cut(s)	787, 958, 1089, 1092, 1409, 1412
Tsp45I	GTSAC	1 cut(s)	434
TspDTI	ATGAA	8 cut(s)	347, 732, 1074, 1149, 1220, 1400, 1457, 1556
TspGWI	ACGGA	1 cut(s)	402
TspRI	CASTG	3 cut(s)	280, 640, 827
Tth111I	GACNNNGTC	1 cut(s)	884
Van91I	CCANNNNNTGG	1 cut(s)	933
VpaK11BI	GGWCC	1 cut(s)	920
XapI	RAATTY	1 cut(s)	1075
XceI	RCATGY	1 cut(s)	1322
XmnI	GAANNNNTTC	1 cut(s)	1227
XspI	CTAG	4 cut(s)	33, 651, 1245, 1254

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.