pycom16g06360

Methyltransferase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
Physical Location & Seq
Forward (+)
4085714 .. 4089073
3360 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom16g06360.4

Sequence Viewer

Length: 1518 bp
ATGACATTCCCAAGGGAAGATATGAATTATCGAGAGAGGCATTGCCCTCCTGAGGAAGAAAAGTTACATTGCCTTATTCCAGCACCAAAGGGGTATGTAACTCCATTCCCCTGGCCAAAGAGCCGTGACTATGTACCATATGCCAATGCACCATATAAGAGCTTGACGGTTGAGAAGGCTGTTCAGAACTGGATCGAATATGAGGGTAATGTTTTTCGATTCCCTGGTGGGGGAACGCAGTTTCCTCAAGGGGCTGATAAATATATTGATCAGCTTGCTGCTGTGATACCAATAAAGAATGGGACAGTAAGAACTGCACTGGACACTGGTTGTGGGGTTGCCAGTTGGGGTGCATACTTGTTGAGTAGAAATGTTCTTGCCATGTCGTTTGCGCCAAGAGATTCCCATGAGGCACAAGTCCAATTTGCTCTTGAGAGGGGTGTACCTGCAGTTATTGGTGTTCTGGGTACAATAAAGCTGCCCTATCCATCCAGAGCCTTTGACATGGCTCATTGTTCTCGTTGCTTAATTCCATGGGGAATAAATGATGGAAAATATCTCAAGGAAGTTGACCGAGTTCTTAGGCCTGGGGGTTATTGGGTGCTTTCGGGTCCTCCAATCAATTGGAAGAATAATTACCAAGCATGGCAGCGTCCCAAGGAGGATCTTCAGGAGGAACAGAGACAGATTGAAGAAGCTGCTAAACTTCTTTGCTGGGAGAAGAAGTCTGAGAAGGGTGAAACTGCCATTTGGCAGAAGAGGGTAGATTCTGATTCATGTGGAGACAGACAAGATGATTCCCGTGCTAACTTTTGTAAAGCTGATGAAGCAGATAGCGTCTGGTATAAGAAAATGGAGGGATGCATAACTCCATACCCTAAAGTTTCCAGTGGGGAGTTGAAGCCGTTTCCAAAAAGGCTTTATGCTGTTCCCCCCAGGATTTCTAGTGGGTCTGTTCCTGGAGTTTCTGTTGAGGACTACGAGGAGGATAACAACAAATGGAAGAAGCACGTGAATGCTTATAAACGAATCAATAAACTAATAGACACAGGAAGGTATCGCAACATTATGGATATGAATGCTGGTTTGGGTGGTTTTGCTGCAGCAATTGAATCTCCAAAATTGTGGGTCATGAATGTGGTGCCCACAATAGCTGAGAAAAATACACTGGGTGTTGTTTATGAGCGAGGATTGATTGGAATCTACCATGATTGGTGTGAAGGTTTCTCTACTTACCCAAGGACATATGACCTCATTCATGCCCATGGTGTTTTCAGTTTGTACAATGGAAAATGCAACTGGGAAGACATTCTTCTAGAGATGGATCGGATCTTGCGGCCAGAAGGTGCCGTCATATTCCGTGATGAAGTCGATGTATTAGTTAAGGTGAAGAAGATAGTTGGAGGAATGAGATGGGATACTAAAATGGTGGACCATGAGGATGGTCCCCTTGTACCAGAGAAGGTATTGGTTGCTGTCAAGCAGTACTGGGTTGGAAACTCCACCTCCGCGCAATGA

Protein Analysis

506

Amino Acids

57.31

Weight (kDa)

7.51

Isoelectric Point (pI)

38.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1023
Acc36I ACCTGC 1 cut(s) 454
AccB1I GGYRCC 2 cut(s) 1141, 1346
AccII CGCG 1 cut(s) 1511
AciI CCGC 2 cut(s) 1336, 1509
AclWI GGATC 4 cut(s) 200, 672, 1332, 1337
AcoI YGGCCR 2 cut(s) 113, 1337
AcuI CTGAAG 1 cut(s) 653
AcvI CACGTG 1 cut(s) 1012
AdeI CACNNNGTG 1 cut(s) 1172
AfaI GTAC 6 cut(s) 135, 444, 469, 1283, 1455, 1487
AfiI CCNNNNNNNGG 3 cut(s) 52, 229, 230
AgsI TTSAA 3 cut(s) 692, 901, 1112
AjnI CCWGG 5 cut(s) 110, 223, 586, 935, 958
AjuI GAANNNNNNNTTGG 2 cut(s) 1070, 1102
AloI GAACNNNNNNTCC 2 cut(s) 226, 258
AluBI AGCT 6 cut(s) 162, 274, 478, 698, 821, 1154
AluI AGCT 6 cut(s) 162, 274, 478, 698, 821, 1154
Alw26I GTCTC 2 cut(s) 676, 777
AlwI GGATC 4 cut(s) 200, 672, 1332, 1337
AoxI GGCC 3 cut(s) 113, 584, 1337
ApeKI GCWGC 6 cut(s) 278, 478, 649, 698, 1100, 1103
Asp700I GAANNNNTTC 1 cut(s) 1308
AspLEI GCGC 2 cut(s) 394, 1513
AspS9I GGNCC 3 cut(s) 611, 1432, 1445
AsuHPI GGTGA 2 cut(s) 749, 1399
AvaII GGWCC 3 cut(s) 611, 1432, 1445
AxyI CCTNAGG 1 cut(s) 51
BaeGI GKGCMC 1 cut(s) 1146
BalI TGGCCA 1 cut(s) 115
BanI GGYRCC 2 cut(s) 1141, 1346
BarI GAAGNNNNNNTAC 4 cut(s) 48, 80, 620, 652
BbrPI CACGTG 1 cut(s) 1012
BbsI GAAGAC 1 cut(s) 1311
BbvI GCAGC 6 cut(s) 265, 465, 661, 685, 1087, 1115
BccI CCATC 5 cut(s) 496, 542, 1315, 1407, 1436
BceAI ACGGC 3 cut(s) 108, 889, 1334
BciT130I CCWGG 5 cut(s) 112, 225, 588, 937, 960
BciVI GTATCC 1 cut(s) 1411
BclI TGATCA 1 cut(s) 268
BcoDI GTCTC 2 cut(s) 676, 777
BfaI CTAG 2 cut(s) 945, 1316
BfmI CTRYAG 2 cut(s) 447, 1101
BfuAI ACCTGC 1 cut(s) 454
BfuI GTATCC 1 cut(s) 1411
BisI GCNGC 7 cut(s) 279, 479, 650, 699, 1101, 1104, 1337
BlsI GCNGC 7 cut(s) 280, 480, 651, 700, 1102, 1105, 1338
BmcAI AGTACT 1 cut(s) 1487
Bme1390I CCNGG 5 cut(s) 112, 225, 588, 937, 960
Bme18I GGWCC 3 cut(s) 611, 1432, 1445
BmgT120I GGNCC 3 cut(s) 611, 1432, 1445
BmiI GGNNCC 4 cut(s) 612, 1143, 1348, 1447
BmrFI CCNGG 5 cut(s) 112, 225, 588, 937, 960
BmrI ACTGGG 3 cut(s) 1178, 1309, 1498
BmsI GCATC 1 cut(s) 851
BmuI ACTGGG 3 cut(s) 1178, 1309, 1498
BpiI GAAGAC 1 cut(s) 1311
BpmI CTGGAG 1 cut(s) 981
BpuEI CTTGAG 3 cut(s) 231, 452, 545
BsaAI YACGTR 1 cut(s) 1012
BsaBI GATNNNNATC 1 cut(s) 1199
BsaJI CCNNGG 9 cut(s) 11, 110, 223, 533, 587, 657, 935, 1238, 1264
BsaXI ACNNNNNCTCC 5 cut(s) 710, 740, 954, 984, 1490
Bsc4I CCNNNNNNNGG 3 cut(s) 52, 229, 230
Bse1I ACTGG 8 cut(s) 194, 324, 331, 342, 888, 1173, 1304, 1493
Bse21I CCTNAGG 1 cut(s) 51
Bse3DI GCAATG 2 cut(s) 40, 67
Bse8I GATNNNNATC 1 cut(s) 1199
BseBI CCWGG 5 cut(s) 112, 225, 588, 937, 960
BseDI CCNNGG 9 cut(s) 11, 110, 223, 533, 587, 657, 935, 1238, 1264
BseGI GGATG 3 cut(s) 488, 866, 1447
BseJI GATNNNNATC 1 cut(s) 1199
BseLI CCNNNNNNNGG 3 cut(s) 52, 229, 230
BseMI GCAATG 2 cut(s) 40, 67
BseMII CTCAG 3 cut(s) 42, 720, 1146
BseNI ACTGG 8 cut(s) 194, 324, 331, 342, 888, 1173, 1304, 1493
BseRI GAGGAG 1 cut(s) 998
BseSI GKGCMC 1 cut(s) 1146
BseXI GCAGC 6 cut(s) 265, 465, 661, 685, 1087, 1115
BseYI CCCAGC 1 cut(s) 714
BsgI GTGCAG 1 cut(s) 300
Bsh1236I CGCG 1 cut(s) 1511
BshFI GGCC 3 cut(s) 115, 586, 1339
BshNI GGYRCC 2 cut(s) 1141, 1346
BslFI GGGAC 3 cut(s) 316, 639, 1431
BslI CCNNNNNNNGG 3 cut(s) 52, 229, 230
BsmAI GTCTC 2 cut(s) 676, 777
BsmFI GGGAC 3 cut(s) 316, 639, 1431
BsmI GAATGC 2 cut(s) 1021, 1084
BsnI GGCC 3 cut(s) 115, 586, 1339
Bsp1286I GDGCHC 1 cut(s) 1146
Bsp1407I TGTACA 1 cut(s) 1281
Bsp143I GATC 5 cut(s) 192, 268, 664, 1324, 1329
Bsp19I CCATGG 2 cut(s) 533, 1264
BspACI CCGC 2 cut(s) 1336, 1509
BspANI GGCC 3 cut(s) 115, 586, 1339
BspCNI CTCAG 3 cut(s) 43, 721, 1147
BspFNI CGCG 1 cut(s) 1511
BspHI TCATGA 1 cut(s) 1131
BspLI GGNNCC 4 cut(s) 612, 1143, 1348, 1447
BspMAI CTGCAG 2 cut(s) 451, 1105
BspMI ACCTGC 1 cut(s) 454
BspPI GGATC 4 cut(s) 200, 672, 1332, 1337
BspT107I GGYRCC 2 cut(s) 1141, 1346
BsrDI GCAATG 2 cut(s) 40, 67
BsrGI TGTACA 1 cut(s) 1281
BsrI ACTGG 8 cut(s) 194, 324, 331, 342, 888, 1173, 1304, 1493
BssECI CCNNGG 9 cut(s) 11, 110, 223, 533, 587, 657, 935, 1238, 1264
BssMI GATC 5 cut(s) 192, 268, 664, 1324, 1329
BssT1I CCWWGG 5 cut(s) 11, 533, 657, 1238, 1264
Bst2UI CCWGG 5 cut(s) 112, 225, 588, 937, 960
Bst4CI ACNGT 2 cut(s) 169, 307
Bst6I CTCTTC 1 cut(s) 752
BstAUI TGTACA 1 cut(s) 1281
BstBAI YACGTR 1 cut(s) 1012
BstC8I GCNNGC 1 cut(s) 276
BstDEI CTNAG 4 cut(s) 51, 581, 729, 1155
BstDSI CCRYGG 2 cut(s) 533, 1264
BstF5I GGATG 3 cut(s) 488, 866, 1447
BstFNI CGCG 1 cut(s) 1511
BstHHI GCGC 2 cut(s) 394, 1513
BstKTI GATC 5 cut(s) 195, 271, 667, 1327, 1332
BstMAI GTCTC 2 cut(s) 676, 777
BstMBI GATC 5 cut(s) 192, 268, 664, 1324, 1329
BstMWI GCNNNNNNNGC 1 cut(s) 827
BstNI CCWGG 5 cut(s) 112, 225, 588, 937, 960
BstSCI CCNGG 5 cut(s) 110, 223, 586, 935, 958
BstSFI CTRYAG 2 cut(s) 447, 1101
BstSLI GKGCMC 1 cut(s) 1146
BstUI CGCG 1 cut(s) 1511
BstV1I GCAGC 6 cut(s) 265, 465, 661, 685, 1087, 1115
BstV2I GAAGAC 1 cut(s) 1311
BstX2I RGATCY 2 cut(s) 664, 1329
BstXI CCANNNNNNTGG 4 cut(s) 111, 624, 1125, 1442
BstYI RGATCY 2 cut(s) 664, 1329
Bsu36I CCTNAGG 1 cut(s) 51
BsuI GTATCC 1 cut(s) 1411
BsuRI GGCC 3 cut(s) 115, 586, 1339
BtgI CCRYGG 2 cut(s) 533, 1264
BtsCI GGATG 3 cut(s) 488, 866, 1447
BtsIMutI CAGTG 4 cut(s) 317, 324, 895, 1166
BveI ACCTGC 1 cut(s) 454
Cac8I GCNNGC 1 cut(s) 276
CciI TCATGA 1 cut(s) 1131
CfoI GCGC 2 cut(s) 394, 1513
Cfr13I GGNCC 3 cut(s) 611, 1432, 1445
CseI GACGC 2 cut(s) 641, 826
Csp6I GTAC 6 cut(s) 134, 443, 468, 1282, 1454, 1486
CviQI GTAC 6 cut(s) 134, 443, 468, 1282, 1454, 1486
DdeI CTNAG 4 cut(s) 51, 581, 729, 1155
DpnI GATC 5 cut(s) 194, 270, 666, 1326, 1331
DpnII GATC 5 cut(s) 192, 268, 664, 1324, 1329
DraIII CACNNNGTG 1 cut(s) 1172
EaeI YGGCCR 2 cut(s) 113, 1337
Eam1104I CTCTTC 1 cut(s) 752
EarI CTCTTC 1 cut(s) 752
Eco130I CCWWGG 5 cut(s) 11, 533, 657, 1238, 1264
Eco147I AGGCCT 1 cut(s) 586
Eco47I GGWCC 3 cut(s) 611, 1432, 1445
Eco57I CTGAAG 1 cut(s) 653
Eco72I CACGTG 1 cut(s) 1012
Eco81I CCTNAGG 1 cut(s) 51
EcoO109I RGGNCCY 1 cut(s) 611
EcoRII CCWGG 5 cut(s) 110, 223, 586, 935, 958
EcoT14I CCWWGG 5 cut(s) 11, 533, 657, 1238, 1264
EcoT22I ATGCAT 1 cut(s) 866
ErhI CCWWGG 5 cut(s) 11, 533, 657, 1238, 1264
FalI AAGNNNNNCTT 2 cut(s) 1296, 1328
FaqI GGGAC 3 cut(s) 316, 639, 1431
FauNDI CATATG 2 cut(s) 139, 1246
FbaI TGATCA 1 cut(s) 268
Fnu4HI GCNGC 7 cut(s) 279, 479, 650, 699, 1101, 1104, 1337
FokI GGATG 3 cut(s) 475, 873, 1454
Fsp4HI GCNGC 7 cut(s) 279, 479, 650, 699, 1101, 1104, 1337
FspBI CTAG 2 cut(s) 945, 1316
GlaI GCGC 2 cut(s) 393, 1512
GluI GCNGC 7 cut(s) 279, 479, 650, 699, 1101, 1104, 1337
GsaI CCCAGC 1 cut(s) 718
GsuI CTGGAG 1 cut(s) 981
HaeIII GGCC 3 cut(s) 115, 586, 1339
HgaI GACGC 2 cut(s) 641, 826
HhaI GCGC 2 cut(s) 394, 1513
Hin6I GCGC 2 cut(s) 392, 1511
HinP1I GCGC 2 cut(s) 392, 1511
HincII GTYRAC 1 cut(s) 571
HindII GTYRAC 1 cut(s) 571
HinfI GANTC 8 cut(s) 219, 401, 767, 773, 797, 1029, 1112, 1200
HphI GGTGA 2 cut(s) 749, 1399
Hpy166II GTNNAC 3 cut(s) 443, 571, 1432
Hpy188I TCNGA 4 cut(s) 186, 730, 772, 1329
Hpy188III TCNNGA 7 cut(s) 32, 50, 431, 492, 671, 1132, 1316
Hpy8I GTNNAC 3 cut(s) 443, 571, 1432
HpyAV CCTTC 6 cut(s) 169, 727, 1047, 1214, 1337, 1456
HpyCH4III ACNGT 2 cut(s) 169, 307
HpyCH4IV ACGT 1 cut(s) 1011
HpyCH4V TGCA 7 cut(s) 149, 317, 353, 449, 864, 1103, 1296
HpyF10VI GCNNNNNNNGC 1 cut(s) 827
HpyF3I CTNAG 4 cut(s) 51, 581, 729, 1155
HpySE526I ACGT 1 cut(s) 1011
HspAI GCGC 2 cut(s) 392, 1511
Ksp22I TGATCA 1 cut(s) 268
Kzo9I GATC 5 cut(s) 192, 268, 664, 1324, 1329
Lsp1109I GCAGC 6 cut(s) 265, 465, 661, 685, 1087, 1115
LweI GCATC 1 cut(s) 851
MaeI CTAG 2 cut(s) 945, 1316
MaeII ACGT 1 cut(s) 1011
MaeIII GTNAC 3 cut(s) 63, 97, 125
MalI GATC 5 cut(s) 194, 270, 666, 1326, 1331
MboI GATC 5 cut(s) 192, 268, 664, 1324, 1329
MfeI CAATTG 2 cut(s) 622, 1107
MflI RGATCY 2 cut(s) 664, 1329
MhlI GDGCHC 1 cut(s) 1146
MlsI TGGCCA 1 cut(s) 115
MluCI AATT 7 cut(s) 25, 422, 528, 622, 634, 1107, 1121
MluNI TGGCCA 1 cut(s) 115
MmeI TCCRAC 2 cut(s) 1381, 1474
Mox20I TGGCCA 1 cut(s) 115
Mph1103I ATGCAT 1 cut(s) 866
MroXI GAANNNNTTC 1 cut(s) 1308
MscI TGGCCA 1 cut(s) 115
MseI TTAA 2 cut(s) 527, 1383
MslI CAYNNNNRTG 4 cut(s) 1014, 1136, 1263, 1440
Msp20I TGGCCA 1 cut(s) 115
MspR9I CCNGG 5 cut(s) 112, 225, 588, 937, 960
MunI CAATTG 2 cut(s) 622, 1107
Mva1269I GAATGC 2 cut(s) 1021, 1084
MvaI CCWGG 5 cut(s) 112, 225, 588, 937, 960
MvnI CGCG 1 cut(s) 1511
MwoI GCNNNNNNNGC 1 cut(s) 827
NcoI CCATGG 2 cut(s) 533, 1264
NdeI CATATG 2 cut(s) 139, 1246
NdeII GATC 5 cut(s) 192, 268, 664, 1324, 1329
NlaIV GGNNCC 4 cut(s) 612, 1143, 1348, 1447
NmuCI GTSAC 1 cut(s) 125
NsiI ATGCAT 1 cut(s) 866
PagI TCATGA 1 cut(s) 1131
PceI AGGCCT 1 cut(s) 586
PctI GAATGC 2 cut(s) 1021, 1084
PdmI GAANNNNTTC 1 cut(s) 1308
PfeI GAWTC 8 cut(s) 219, 401, 767, 773, 797, 1029, 1112, 1200
PfoI TCCNGGA 1 cut(s) 958
PkrI GCNGC 7 cut(s) 280, 480, 651, 700, 1102, 1105, 1338
PmaCI CACGTG 1 cut(s) 1012
PmlI CACGTG 1 cut(s) 1012
Ppu21I YACGTR 1 cut(s) 1012
PpuMI RGGWCCY 1 cut(s) 611
PsiI TTATAA 1 cut(s) 1023
Psp5II RGGWCCY 1 cut(s) 611
Psp6I CCWGG 5 cut(s) 110, 223, 586, 935, 958
PspCI CACGTG 1 cut(s) 1012
PspFI CCCAGC 1 cut(s) 714
PspGI CCWGG 5 cut(s) 110, 223, 586, 935, 958
PspN4I GGNNCC 4 cut(s) 612, 1143, 1348, 1447
PspPI GGNCC 3 cut(s) 611, 1432, 1445
PspPPI RGGWCCY 1 cut(s) 611
PstI CTGCAG 2 cut(s) 451, 1105
PsuI RGATCY 2 cut(s) 664, 1329
RsaI GTAC 6 cut(s) 135, 444, 469, 1283, 1455, 1487
RsaNI GTAC 6 cut(s) 134, 443, 468, 1282, 1454, 1486
RseI CAYNNNNRTG 4 cut(s) 1014, 1136, 1263, 1440
SaqAI TTAA 2 cut(s) 527, 1383
SatI GCNGC 7 cut(s) 279, 479, 650, 699, 1101, 1104, 1337
Sau3AI GATC 5 cut(s) 192, 268, 664, 1324, 1329
Sau96I GGNCC 3 cut(s) 611, 1432, 1445
ScaI AGTACT 1 cut(s) 1487
ScrFI CCNGG 5 cut(s) 112, 225, 588, 937, 960
SduI GDGCHC 1 cut(s) 1146
SfaNI GCATC 1 cut(s) 851
SfcI CTRYAG 2 cut(s) 447, 1101
SinI GGWCC 3 cut(s) 611, 1432, 1445
SmiMI CAYNNNNRTG 4 cut(s) 1014, 1136, 1263, 1440
SmlI CTYRAG 3 cut(s) 246, 431, 560
SmoI CTYRAG 3 cut(s) 246, 431, 560
Sse9I AATT 7 cut(s) 25, 422, 528, 622, 634, 1107, 1121
SseBI AGGCCT 1 cut(s) 586
SsiI CCGC 2 cut(s) 1336, 1509
SspMI CTAG 2 cut(s) 945, 1316
StuI AGGCCT 1 cut(s) 586
StyD4I CCNGG 5 cut(s) 110, 223, 586, 935, 958
StyI CCWWGG 5 cut(s) 11, 533, 657, 1238, 1264
TaaI ACNGT 2 cut(s) 169, 307
TaiI ACGT 1 cut(s) 1014
TaqI TCGA 4 cut(s) 31, 195, 217, 1371
TaqII GACCGA 1 cut(s) 588
TasI AATT 7 cut(s) 25, 422, 528, 622, 634, 1107, 1121
TatI WGTACW 2 cut(s) 1281, 1485
TauI GCSGC 1 cut(s) 1339
TfiI GAWTC 8 cut(s) 219, 401, 767, 773, 797, 1029, 1112, 1200
Tru1I TTAA 2 cut(s) 527, 1383
Tru9I TTAA 2 cut(s) 527, 1383
TscAI CASTG 4 cut(s) 324, 331, 895, 1173
TseFI GTSAC 1 cut(s) 125
TseI GCWGC 6 cut(s) 278, 478, 649, 698, 1100, 1103
Tsp45I GTSAC 1 cut(s) 125
TspDTI ATGAA 7 cut(s) 38, 765, 840, 1091, 1148, 1247, 1380
TspGWI ACGGA 1 cut(s) 1349
TspRI CASTG 4 cut(s) 324, 331, 895, 1173
VpaK11BI GGWCC 3 cut(s) 611, 1432, 1445
XbaI TCTAGA 1 cut(s) 1315
XmnI GAANNNNTTC 1 cut(s) 1308
XspI CTAG 2 cut(s) 945, 1316
ZrmI AGTACT 1 cut(s) 1487
Zsp2I ATGCAT 1 cut(s) 866
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.