Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0007725

Physical Location & Seq

Genomic Coordinates Reverse (-)

29217247 .. 29219299

Gene Structure 2053 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G295200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 933 bp

ATGTCTAGAGCCAATGTAAGAAGGCATGTACTTCTGGAGAACAAAGTTTTGAAAGAGAGAGAGAAGACAAGTAGCCCTAAACACCTCAAGAGAATCTACCCAATTGGGCTTCATAAGAGCACTTCATCTCTATCTCTATCTCTGTCATCATCTTTGTCATTGTCTCTGTCAGAAAACTCCTATGATTCTTCTCTCACTGACTCTAGCACATTGGATCAGAAGATTTCCGCCGCGCTCCGATTCATCGCACCAACTCAAAGAAGAGAATATAATTCCCCAGTGGCTAAAGTTGTCCAGCAGCAAATTAGTCAGGCTCAGGATACTAATGATGAGGAATTGAAGAGGTGCAATTGGATAACAAAGAATAGTGATAAAGTTTATGTAGCGTTTCACGACGAATGCTGGGGAGTTCCAGCATACGATGACAATCAATTGTTTGAGCTGCTTGCATTGTCTGGTATGTTGATGGACCACAACTGGACTGAAATTGTCAAAAGAAGGGAGCTCTTCAGGGAAGCATTTTTCGGATTTGATCCAAACAAAGTTGCCAAAATGGGGGAGAAGGAGATTGCAGAGATAGCCTCCAACAAGGCAATAATGTTGGCAGAGTGCAAAGTGAGGTGCATAATAGACAATGCCAAATGCATATTGAAGATTGTGAGGGAATGTGGCTCTTTTAGCAGCTACATGTGGGGTTCTGTGAACCACAAACCAGTCATCAACAGATTCAGATATCCAAGAAATGTTCCTCTAAGGAGCCCCAAAGCAGAAGCCATGAGCAAGGATTTGATCAAGCGAGGGTTTCGATATGTTGGGCCAGTCATTGTGTATTCCTTCATGCAAGCTGCAGGGTTGACCATTGATCATCTTGTGGATTGTTATAGATACAGTGAATGTGTGAGCCTTGCAGAAAGACCTTGGAGACATATCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03410 map03410

Pfam Domains

Protein Families

Adenine_glyco

Protein Analysis

311

Amino Acids

35.55

Weight (kDa)

9.23

Isoelectric Point (pI)

55.94

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007725)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G13635 AT1G13635
fragaria_vesca	FvH4_4g29150 FvH4_4g29150 FvH4_4g29150
malus_domestica	MD13G1055700.v1.1 MD16G1054800.v1.1
prunus_persica	Prupe.1G295200_v2.0.a1
pyrus_communis	pycom13g04930 pycom16g04770
rosa_chinensis	RchiOBHm_Chr4g0437191
rosa_laevigata	RLG00000006456
rosa_multiflora	Rmu_sc0000591.1_g000005 Rmu_sc0004339.1_g000001
rosa_roxburghii	Rroxscaffold_5G00378330
rosa_rugosa	Rorug04G0298600 Rorug04G0298600 Rorug04G0298700.1 Rorug04G0298800
rosa_samantha	Rh4AG353600 Rh4BG363400 Rh4CG377600 Rh4DG357400
rosa_wichuraiana	Rw4G030980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	233
AciI	CCGC	2 cut(s)	228, 231
AclWI	GGATC	2 cut(s)	222, 527
AcuI	CTGAAG	1 cut(s)	493
AfaI	GTAC	1 cut(s)	30
AfiI	CCNNNNNNNGG	1 cut(s)	555
AflIII	ACRYGT	1 cut(s)	687
AgsI	TTSAA	3 cut(s)	52, 340, 652
AluBI	AGCT	4 cut(s)	442, 505, 684, 845
AluI	AGCT	4 cut(s)	442, 505, 684, 845
Alw21I	GWGCWC	2 cut(s)	122, 507
Alw26I	GTCTC	2 cut(s)	168, 916
AlwI	GGATC	2 cut(s)	222, 527
AoxI	GGCC	1 cut(s)	815
ApeKI	GCWGC	4 cut(s)	298, 442, 681, 845
AspLEI	GCGC	1 cut(s)	235
AspS9I	GGNCC	2 cut(s)	469, 815
AvaII	GGWCC	1 cut(s)	469
BanII	GRGCYC	2 cut(s)	507, 761
BbsI	GAAGAC	1 cut(s)	71
Bbv12I	GWGCWC	2 cut(s)	122, 507
BbvI	GCAGC	4 cut(s)	310, 429, 693, 832
BccI	CCATC	1 cut(s)	460
BciVI	GTATCC	1 cut(s)	313
BclI	TGATCA	2 cut(s)	789, 862
BcoDI	GTCTC	2 cut(s)	168, 916
BfaI	CTAG	2 cut(s)	6, 204
BfmI	CTRYAG	1 cut(s)	846
BfuI	GTATCC	1 cut(s)	313
BisI	GCNGC	5 cut(s)	231, 299, 443, 682, 846
BlsI	GCNGC	5 cut(s)	232, 300, 444, 683, 847
Bme18I	GGWCC	1 cut(s)	469
BmgT120I	GGNCC	2 cut(s)	469, 815
BmiI	GGNNCC	1 cut(s)	758
BmrI	ACTGGG	1 cut(s)	272
BmuI	ACTGGG	1 cut(s)	272
BpiI	GAAGAC	1 cut(s)	71
BplI	GAGNNNNNCTC	2 cut(s)	566, 598
BpmI	CTGGAG	1 cut(s)	56
Bpu10I	CCTNAGC	1 cut(s)	315
BpuEI	CTTGAG	1 cut(s)	71
BsaBI	GATNNNNATC	1 cut(s)	426
BsaJI	CCNNGG	1 cut(s)	917
Bsc4I	CCNNNNNNNGG	1 cut(s)	555
Bse1I	ACTGG	4 cut(s)	278, 482, 713, 818
Bse8I	GATNNNNATC	1 cut(s)	426
BseDI	CCNNGG	1 cut(s)	917
BseJI	GATNNNNATC	1 cut(s)	426
BseLI	CCNNNNNNNGG	1 cut(s)	555
BseMII	CTCAG	1 cut(s)	329
BseNI	ACTGG	4 cut(s)	278, 482, 713, 818
BseXI	GCAGC	4 cut(s)	310, 429, 693, 832
BseYI	CCCAGC	1 cut(s)	402
Bsh1236I	CGCG	1 cut(s)	233
BshFI	GGCC	1 cut(s)	817
BsiHKAI	GWGCWC	2 cut(s)	122, 507
BslI	CCNNNNNNNGG	1 cut(s)	555
BsmAI	GTCTC	2 cut(s)	168, 916
BsmI	GAATGC	1 cut(s)	404
BsnI	GGCC	1 cut(s)	817
Bsp1286I	GDGCHC	3 cut(s)	122, 507, 761
Bsp143I	GATC	4 cut(s)	214, 532, 789, 862
BspACI	CCGC	2 cut(s)	228, 231
BspANI	GGCC	1 cut(s)	817
BspCNI	CTCAG	1 cut(s)	328
BspFNI	CGCG	1 cut(s)	233
BspLI	GGNNCC	1 cut(s)	758
BspMAI	CTGCAG	1 cut(s)	850
BspPI	GGATC	2 cut(s)	222, 527
BspQI	GCTCTTC	1 cut(s)	512
BsrI	ACTGG	4 cut(s)	278, 482, 713, 818
BssECI	CCNNGG	1 cut(s)	917
BssMI	GATC	4 cut(s)	214, 532, 789, 862
BssT1I	CCWWGG	1 cut(s)	917
Bst4CI	ACNGT	1 cut(s)	890
Bst6I	CTCTTC	3 cut(s)	256, 335, 512
BstC8I	GCNNGC	2 cut(s)	447, 843
BstDEI	CTNAG	2 cut(s)	315, 752
BstFNI	CGCG	1 cut(s)	233
BstHHI	GCGC	1 cut(s)	235
BstKTI	GATC	4 cut(s)	217, 535, 792, 865
BstMAI	GTCTC	2 cut(s)	168, 916
BstMBI	GATC	4 cut(s)	214, 532, 789, 862
BstMWI	GCNNNNNNNGC	2 cut(s)	578, 678
BstNSI	RCATGY	2 cut(s)	29, 691
BstSFI	CTRYAG	1 cut(s)	846
BstUI	CGCG	1 cut(s)	233
BstV1I	GCAGC	4 cut(s)	310, 429, 693, 832
BstV2I	GAAGAC	1 cut(s)	71
BsuI	GTATCC	1 cut(s)	313
BsuRI	GGCC	1 cut(s)	817
BtgZI	GCGATG	1 cut(s)	229
BtsIMutI	CAGTG	3 cut(s)	195, 285, 895
Cac8I	GCNNGC	2 cut(s)	447, 843
CfoI	GCGC	1 cut(s)	235
Cfr13I	GGNCC	2 cut(s)	469, 815
Csp6I	GTAC	1 cut(s)	29
CviAII	CATG	4 cut(s)	26, 688, 775, 838
CviQI	GTAC	1 cut(s)	29
DdeI	CTNAG	2 cut(s)	315, 752
DpnI	GATC	4 cut(s)	216, 534, 791, 864
DpnII	GATC	4 cut(s)	214, 532, 789, 862
Eam1104I	CTCTTC	3 cut(s)	256, 335, 512
EarI	CTCTTC	3 cut(s)	256, 335, 512
EciI	GGCGGA	1 cut(s)	217
Ecl136II	GAGCTC	1 cut(s)	505
Eco130I	CCWWGG	1 cut(s)	917
Eco24I	GRGCYC	2 cut(s)	507, 761
Eco32I	GATATC	1 cut(s)	734
Eco47I	GGWCC	1 cut(s)	469
Eco53kI	GAGCTC	1 cut(s)	505
Eco57I	CTGAAG	1 cut(s)	493
EcoICRI	GAGCTC	1 cut(s)	505
EcoRV	GATATC	1 cut(s)	734
EcoT14I	CCWWGG	1 cut(s)	917
EcoT22I	ATGCAT	1 cut(s)	647
EcoT38I	GRGCYC	2 cut(s)	507, 761
ErhI	CCWWGG	1 cut(s)	917
FaeI	CATG	4 cut(s)	29, 691, 778, 841
FatI	CATG	4 cut(s)	25, 687, 774, 837
FbaI	TGATCA	2 cut(s)	789, 862
Fnu4HI	GCNGC	5 cut(s)	231, 299, 443, 682, 846
FriOI	GRGCYC	2 cut(s)	507, 761
Fsp4HI	GCNGC	5 cut(s)	231, 299, 443, 682, 846
FspBI	CTAG	2 cut(s)	6, 204
GlaI	GCGC	1 cut(s)	234
GluI	GCNGC	5 cut(s)	231, 299, 443, 682, 846
GsaI	CCCAGC	1 cut(s)	406
GsuI	CTGGAG	1 cut(s)	56
HaeIII	GGCC	1 cut(s)	817
HhaI	GCGC	1 cut(s)	235
Hin1II	CATG	4 cut(s)	29, 691, 778, 841
Hin6I	GCGC	1 cut(s)	233
HinP1I	GCGC	1 cut(s)	233
HincII	GTYRAC	1 cut(s)	855
HindII	GTYRAC	1 cut(s)	855
HinfI	GANTC	5 cut(s)	93, 185, 200, 240, 726
Hpy166II	GTNNAC	2 cut(s)	703, 855
Hpy188I	TCNGA	5 cut(s)	172, 219, 239, 527, 731
Hpy188III	TCNNGA	5 cut(s)	6, 35, 88, 317, 392
Hpy8I	GTNNAC	2 cut(s)	703, 855
Hpy99I	CGWCG	1 cut(s)	398
HpyAV	CCTTC	4 cut(s)	15, 492, 556, 844
HpyCH4III	ACNGT	1 cut(s)	890
HpyCH4V	TGCA	9 cut(s)	348, 449, 572, 612, 624, 645, 841, 848, 908
HpyF10VI	GCNNNNNNNGC	2 cut(s)	578, 678
HpyF3I	CTNAG	2 cut(s)	315, 752
Hsp92II	CATG	4 cut(s)	29, 691, 778, 841
HspAI	GCGC	1 cut(s)	233
Ksp22I	TGATCA	2 cut(s)	789, 862
Kzo9I	GATC	4 cut(s)	214, 532, 789, 862
LguI	GCTCTTC	1 cut(s)	512
LmnI	GCTCC	3 cut(s)	240, 502, 756
Lsp1109I	GCAGC	4 cut(s)	310, 429, 693, 832
MaeI	CTAG	2 cut(s)	6, 204
MalI	GATC	4 cut(s)	216, 534, 791, 864
MboI	GATC	4 cut(s)	214, 532, 789, 862
MboII	GAAGA	7 cut(s)	76, 180, 232, 273, 352, 499, 664
MfeI	CAATTG	3 cut(s)	102, 349, 431
MhlI	GDGCHC	3 cut(s)	122, 507, 761
MluCI	AATT	7 cut(s)	102, 271, 303, 335, 349, 431, 486
MlyI	GAGTC	1 cut(s)	194
MmeI	TCCRAC	1 cut(s)	609
MnlI	CCTC	8 cut(s)	95, 325, 336, 592, 612, 654, 759, 791
Mph1103I	ATGCAT	1 cut(s)	647
MunI	CAATTG	3 cut(s)	102, 349, 431
Mva1269I	GAATGC	1 cut(s)	404
MvnI	CGCG	1 cut(s)	233
MwoI	GCNNNNNNNGC	2 cut(s)	578, 678
NdeII	GATC	4 cut(s)	214, 532, 789, 862
NlaIII	CATG	4 cut(s)	29, 691, 778, 841
NlaIV	GGNNCC	1 cut(s)	758
NsiI	ATGCAT	1 cut(s)	647
NspI	RCATGY	2 cut(s)	29, 691
PciI	ACATGT	1 cut(s)	687
PciSI	GCTCTTC	1 cut(s)	512
PctI	GAATGC	1 cut(s)	404
PfeI	GAWTC	4 cut(s)	93, 185, 240, 726
PkrI	GCNGC	5 cut(s)	232, 300, 444, 683, 847
PleI	GAGTC	1 cut(s)	194
PpsI	GAGTC	1 cut(s)	194
PscI	ACATGT	1 cut(s)	687
Psp124BI	GAGCTC	1 cut(s)	507
PspFI	CCCAGC	1 cut(s)	402
PspN4I	GGNNCC	1 cut(s)	758
PspPI	GGNCC	2 cut(s)	469, 815
PstI	CTGCAG	1 cut(s)	850
RsaI	GTAC	1 cut(s)	30
RsaNI	GTAC	1 cut(s)	29
SacI	GAGCTC	1 cut(s)	507
SapI	GCTCTTC	1 cut(s)	512
SatI	GCNGC	5 cut(s)	231, 299, 443, 682, 846
Sau3AI	GATC	4 cut(s)	214, 532, 789, 862
Sau96I	GGNCC	2 cut(s)	469, 815
SchI	GAGTC	1 cut(s)	194
SduI	GDGCHC	3 cut(s)	122, 507, 761
SetI	ASST	8 cut(s)	87, 347, 444, 507, 623, 686, 847, 919
SfcI	CTRYAG	1 cut(s)	846
SinI	GGWCC	1 cut(s)	469
SmlI	CTYRAG	1 cut(s)	86
SmoI	CTYRAG	1 cut(s)	86
Sse9I	AATT	7 cut(s)	102, 271, 303, 335, 349, 431, 486
SsiI	CCGC	2 cut(s)	228, 231
SspMI	CTAG	2 cut(s)	6, 204
SstI	GAGCTC	1 cut(s)	507
StyI	CCWWGG	1 cut(s)	917
TaaI	ACNGT	1 cut(s)	890
TaqI	TCGA	1 cut(s)	805
TasI	AATT	7 cut(s)	102, 271, 303, 335, 349, 431, 486
TatI	WGTACW	1 cut(s)	28
TauI	GCSGC	1 cut(s)	233
TfiI	GAWTC	4 cut(s)	93, 185, 240, 726
TscAI	CASTG	3 cut(s)	202, 285, 895
TseI	GCWGC	4 cut(s)	298, 442, 681, 845
TspDTI	ATGAA	4 cut(s)	101, 114, 232, 826
TspRI	CASTG	3 cut(s)	202, 285, 895
VpaK11BI	GGWCC	1 cut(s)	469
XbaI	TCTAGA	1 cut(s)	5
XceI	RCATGY	2 cut(s)	29, 691
XspI	CTAG	2 cut(s)	6, 204
Zsp2I	ATGCAT	1 cut(s)	647

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.