Prupe.1G331900_v2.0.a1

Cysteine-rich repeat secretory protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0009865
Physical Location & Seq
Reverse (-)
31429235 .. 31432157
2923 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G331900.1

Sequence Viewer

Length: 894 bp
ATGTCTTTAACTTCTCATCAAACACTTGTGTTTCTTTGGGTTTTCCTTCTCGCTACTGTTTCTTTCCTCGCAACCCCATCCGCCTCTGCGATTAACTCCTTCGTCTTCGGGGGCTGTTCCCAGCAAAAATACCTCCCGGGTTCGCCTTACGAGTCCAAAGTCAACTCGCTCCTCACCTCCCTGGTCAACTCGGCCATGTTCACCACCTACAACAACTTCACCATCCCCGGCTCCTCCTCCCAGGACACAGTCTACGGCCTCTTCCAATGCCGCGGCGACCTCAGCAACAATGACTGCGCCCAATGCGTCGCCCGCTCGGTGAGTCAACTCGGTAACCTATGCCTCAACTCGTGCGGCGGCGCGTTGCAGCTCGAGGGCTGCTTTATCAAGTACGACAATTCGACGTTCTTGGGGGTGGAGGACAAGACCGTGGTGATCAAGAAATGTGGGCAGTCGATTGGGTTTGACTCGGACGTGTTGACCAGGCGCGATGCCGTGCTGGGGTATCTTGGGACCGGAGACGGGACCTACAGGCCGTACAGGGTGAGTGGCTCCGGGAATGTCCAGGGTGTGGCGCAGTGTGTCGGGGACTTGAGTCCGAGCGAGTGCCAGGATTGTCTGTCGGAGGCCATCGCGCAGCTCAAATCAGGCTGTGGGCCCAGCGCGTGGGGGGACATGTTCTTGGCTAAGTGCTACGCGCGCTATTCGCAAGGTGGCTACCACACCAACGGCGGTCATGATTATCACAACGATGATGATGATGATGATGATGATGATGAGCTCGAGAAGACACTTGCAATATTGATTGGAGTCATAGCAGGGGTTGCACTGCTCGTCGTGTTTCTTTCTTACTTCAGAAAGTATTTGTGCGAGGAGGAAAAATGTGGTAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005911 GO:0006950 GO:0006952 GO:0008150 GO:0009506 GO:0009605 GO:0009607 GO:0009617 GO:0030054 GO:0042742 GO:0043207 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0098542
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Stress-antifung

Protein Analysis

298

Amino Acids

31.98

Weight (kDa)

4.66

Isoelectric Point (pI)

34.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0009865)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G01660 AT2G01660 AT2G01660
fragaria_vesca FvH4_4g33800 FvH4_4g33800 FvH4_4g33800
malus_domestica MD04G1025700.v1.1 MD13G1029600.v1.1 MD16G1020400.v1.1
prunus_persica Prupe.1G331900_v2.0.a1
pyrus_communis pycom16g01830
rosa_chinensis RchiOBHm_Chr4g0443311
rosa_laevigata RLG00000005939
rosa_multiflora Rmu_ssc0000122.1_g000006
rosa_roxburghii Rroxscaffold_5G00383890
rosa_rugosa Rorug04G0345500
rosa_samantha Rh4AG400400 Rh4BG412000 Rh4CG427400 Rh4DG407400
rosa_wichuraiana Rw4G034540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 571, 666
AccBSI CCGCTC 1 cut(s) 315
AccI GTMKAC 1 cut(s) 252
AccII CGCG 7 cut(s) 273, 362, 489, 635, 665, 698, 700
AciI CCGC 7 cut(s) 81, 271, 273, 313, 354, 357, 732
AcoI YGGCCR 1 cut(s) 192
AcuI CTGAAG 1 cut(s) 838
AfaI GTAC 2 cut(s) 392, 539
AfiI CCNNNNNNNGG 4 cut(s) 501, 522, 571, 666
AflIII ACRYGT 2 cut(s) 474, 675
AjiI CACGTC 1 cut(s) 475
AjnI CCWGG 5 cut(s) 180, 240, 482, 564, 609
AluBI AGCT 3 cut(s) 370, 640, 781
AluI AGCT 3 cut(s) 370, 640, 781
Alw21I GWGCWC 1 cut(s) 783
Alw26I GTCTC 1 cut(s) 513
Ama87I CYCGRG 3 cut(s) 136, 371, 782
AoxI GGCC 5 cut(s) 192, 256, 533, 627, 656
ApaI GGGCCC 1 cut(s) 660
ApeKI GCWGC 3 cut(s) 367, 378, 637
AspLEI GCGC 8 cut(s) 299, 362, 489, 577, 637, 665, 700, 702
AspS9I GGNCC 4 cut(s) 513, 525, 656, 657
AsuC2I CCSGG 4 cut(s) 137, 138, 228, 556
AsuHPI GGTGA 6 cut(s) 166, 193, 211, 331, 445, 556
AvaI CYCGRG 3 cut(s) 136, 371, 782
AvaII GGWCC 2 cut(s) 513, 525
BaeGI GKGCMC 1 cut(s) 660
BanII GRGCYC 2 cut(s) 660, 783
BauI CACGAG 1 cut(s) 349
BbsI GAAGAC 2 cut(s) 97, 794
Bbv12I GWGCWC 1 cut(s) 783
BbvCI CCTCAGC 1 cut(s) 281
BbvI GCAGC 3 cut(s) 365, 379, 649
BccI CCATC 3 cut(s) 85, 230, 638
BceAI ACGGC 4 cut(s) 271, 479, 520, 745
BciT130I CCWGG 5 cut(s) 182, 242, 484, 566, 611
BclI TGATCA 1 cut(s) 435
BcnI CCSGG 4 cut(s) 137, 138, 228, 556
BcoDI GTCTC 1 cut(s) 513
BfmI CTRYAG 1 cut(s) 529
BisI GCNGC 7 cut(s) 271, 274, 355, 358, 368, 379, 638
BlsI GCNGC 7 cut(s) 272, 275, 356, 359, 369, 380, 639
Bme1390I CCNGG 9 cut(s) 137, 138, 182, 228, 242, 484, 556, 566, 611
Bme18I GGWCC 2 cut(s) 513, 525
BmeT110I CYCGRG 3 cut(s) 136, 371, 782
BmgBI CACGTC 1 cut(s) 475
BmgT120I GGNCC 4 cut(s) 513, 525, 656, 657
BmiI GGNNCC 5 cut(s) 232, 514, 526, 553, 658
BmrFI CCNGG 9 cut(s) 137, 138, 182, 228, 242, 484, 556, 566, 611
BmsI GCATC 1 cut(s) 481
BoxI GACNNNNGTC 1 cut(s) 594
BpiI GAAGAC 2 cut(s) 97, 794
Bpu10I CCTNAGC 1 cut(s) 281
BpuEI CTTGAG 1 cut(s) 613
BpuMI CCSGG 4 cut(s) 137, 138, 228, 556
BsaJI CCNNGG 7 cut(s) 136, 180, 226, 240, 271, 429, 565
BsaWI WCCGGW 1 cut(s) 515
Bsc4I CCNNNNNNNGG 4 cut(s) 501, 522, 571, 666
BseBI CCWGG 5 cut(s) 182, 242, 484, 566, 611
BseDI CCNNGG 7 cut(s) 136, 180, 226, 240, 271, 429, 565
BseGI GGATG 2 cut(s) 77, 222
BseLI CCNNNNNNNGG 4 cut(s) 501, 522, 571, 666
BseMII CTCAG 1 cut(s) 295
BsePI GCGCGC 1 cut(s) 698
BseRI GAGGAG 4 cut(s) 161, 223, 226, 887
BseSI GKGCMC 1 cut(s) 660
BseXI GCAGC 3 cut(s) 365, 379, 649
BseYI CCCAGC 3 cut(s) 120, 499, 659
Bsh1236I CGCG 7 cut(s) 273, 362, 489, 635, 665, 698, 700
BshFI GGCC 5 cut(s) 194, 258, 535, 629, 658
BsiHKAI GWGCWC 1 cut(s) 783
BsiHKCI CYCGRG 3 cut(s) 136, 371, 782
BsiSI CCGG 4 cut(s) 137, 228, 516, 555
BslFI GGGAC 4 cut(s) 526, 538, 602, 686
BslI CCNNNNNNNGG 4 cut(s) 501, 522, 571, 666
BsmAI GTCTC 1 cut(s) 513
BsmBI CGTCTC 1 cut(s) 513
BsmFI GGGAC 4 cut(s) 526, 538, 602, 686
BsnI GGCC 5 cut(s) 194, 258, 535, 629, 658
BsoBI CYCGRG 3 cut(s) 136, 371, 782
Bsp120I GGGCCC 1 cut(s) 656
Bsp1286I GDGCHC 2 cut(s) 660, 783
Bsp143I GATC 1 cut(s) 435
BspACI CCGC 7 cut(s) 81, 271, 273, 313, 354, 357, 732
BspANI GGCC 5 cut(s) 194, 258, 535, 629, 658
BspCNI CTCAG 1 cut(s) 294
BspFNI CGCG 7 cut(s) 273, 362, 489, 635, 665, 698, 700
BspHI TCATGA 1 cut(s) 736
BspLI GGNNCC 5 cut(s) 232, 514, 526, 553, 658
BsrBI CCGCTC 1 cut(s) 315
BssECI CCNNGG 7 cut(s) 136, 180, 226, 240, 271, 429, 565
BssHII GCGCGC 1 cut(s) 698
BssMI GATC 1 cut(s) 435
BssSI CACGAG 1 cut(s) 349
Bst2BI CACGAG 1 cut(s) 349
Bst2UI CCWGG 5 cut(s) 182, 242, 484, 566, 611
Bst4CI ACNGT 3 cut(s) 58, 250, 430
Bst6I CTCTTC 1 cut(s) 266
BstAPI GCANNNNNTGC 1 cut(s) 824
BstC8I GCNNGC 2 cut(s) 313, 700
BstDEI CTNAG 2 cut(s) 281, 687
BstDSI CCRYGG 2 cut(s) 271, 429
BstEII GGTNACC 1 cut(s) 332
BstF5I GGATG 2 cut(s) 77, 222
BstFNI CGCG 7 cut(s) 273, 362, 489, 635, 665, 698, 700
BstHHI GCGC 8 cut(s) 299, 362, 489, 577, 637, 665, 700, 702
BstKTI GATC 1 cut(s) 438
BstMAI GTCTC 1 cut(s) 513
BstMBI GATC 1 cut(s) 435
BstMWI GCNNNNNNNGC 6 cut(s) 282, 303, 312, 699, 706, 824
BstNI CCWGG 5 cut(s) 182, 242, 484, 566, 611
BstNSI RCATGY 1 cut(s) 679
BstPAI GACNNNNGTC 1 cut(s) 594
BstPI GGTNACC 1 cut(s) 332
BstSCI CCNGG 9 cut(s) 135, 136, 180, 226, 240, 482, 554, 564, 609
BstSFI CTRYAG 1 cut(s) 529
BstSLI GKGCMC 1 cut(s) 660
BstUI CGCG 7 cut(s) 273, 362, 489, 635, 665, 698, 700
BstV1I GCAGC 3 cut(s) 365, 379, 649
BstV2I GAAGAC 2 cut(s) 97, 794
BsuRI GGCC 5 cut(s) 194, 258, 535, 629, 658
BtgI CCRYGG 2 cut(s) 271, 429
BtgZI GCGATG 2 cut(s) 504, 616
BtrI CACGTC 1 cut(s) 475
BtsCI GGATG 2 cut(s) 77, 222
BtsI GCAGTG 2 cut(s) 584, 827
BtsIMutI CAGTG 2 cut(s) 584, 827
Cac8I GCNNGC 2 cut(s) 313, 700
CciI TCATGA 1 cut(s) 736
CfoI GCGC 8 cut(s) 299, 362, 489, 577, 637, 665, 700, 702
Cfr13I GGNCC 4 cut(s) 513, 525, 656, 657
Cfr42I CCGCGG 1 cut(s) 274
Cfr9I CCCGGG 1 cut(s) 136
CseI GACGC 1 cut(s) 295
Csp6I GTAC 2 cut(s) 391, 538
CspCI CAANNNNNGTGG 2 cut(s) 427, 462
CviAII CATG 3 cut(s) 196, 676, 737
CviQI GTAC 2 cut(s) 391, 538
DdeI CTNAG 2 cut(s) 281, 687
DpnI GATC 1 cut(s) 437
DpnII GATC 1 cut(s) 435
EaeI YGGCCR 1 cut(s) 192
Eam1104I CTCTTC 1 cut(s) 266
EarI CTCTTC 1 cut(s) 266
EciI GGCGGA 1 cut(s) 70
Ecl136II GAGCTC 1 cut(s) 781
Eco24I GRGCYC 2 cut(s) 660, 783
Eco47I GGWCC 2 cut(s) 513, 525
Eco53kI GAGCTC 1 cut(s) 781
Eco57I CTGAAG 1 cut(s) 838
Eco88I CYCGRG 3 cut(s) 136, 371, 782
Eco91I GGTNACC 1 cut(s) 332
EcoICRI GAGCTC 1 cut(s) 781
EcoO109I RGGNCCY 1 cut(s) 525
EcoO65I GGTNACC 1 cut(s) 332
EcoRII CCWGG 5 cut(s) 180, 240, 482, 564, 609
EcoT38I GRGCYC 2 cut(s) 660, 783
Esp3I CGTCTC 1 cut(s) 513
FaeI CATG 3 cut(s) 199, 679, 740
FaiI YATR 5 cut(s) 197, 340, 677, 738, 815
FaqI GGGAC 4 cut(s) 526, 538, 602, 686
FatI CATG 3 cut(s) 195, 675, 736
FauI CCCGC 1 cut(s) 320
FbaI TGATCA 1 cut(s) 435
FblI GTMKAC 1 cut(s) 252
Fnu4HI GCNGC 7 cut(s) 271, 274, 355, 358, 368, 379, 638
FokI GGATG 2 cut(s) 64, 209
FriOI GRGCYC 2 cut(s) 660, 783
Fsp4HI GCNGC 7 cut(s) 271, 274, 355, 358, 368, 379, 638
GlaI GCGC 8 cut(s) 298, 361, 488, 576, 636, 664, 699, 701
GluI GCNGC 7 cut(s) 271, 274, 355, 358, 368, 379, 638
GsaI CCCAGC 3 cut(s) 124, 503, 663
HaeIII GGCC 5 cut(s) 194, 258, 535, 629, 658
HapII CCGG 4 cut(s) 137, 228, 516, 555
HgaI GACGC 1 cut(s) 295
HhaI GCGC 8 cut(s) 299, 362, 489, 577, 637, 665, 700, 702
Hin1II CATG 3 cut(s) 199, 679, 740
Hin6I GCGC 8 cut(s) 297, 360, 487, 575, 635, 663, 698, 700
HinP1I GCGC 8 cut(s) 297, 360, 487, 575, 635, 663, 698, 700
HincII GTYRAC 4 cut(s) 163, 187, 326, 480
HindII GTYRAC 4 cut(s) 163, 187, 326, 480
HinfI GANTC 5 cut(s) 152, 322, 467, 595, 810
HpaII CCGG 4 cut(s) 137, 228, 516, 555
HphI GGTGA 6 cut(s) 166, 193, 211, 331, 445, 556
Hpy166II GTNNAC 6 cut(s) 163, 187, 201, 253, 326, 480
Hpy188I TCNGA 4 cut(s) 472, 600, 625, 857
Hpy188III TCNNGA 3 cut(s) 439, 737, 784
Hpy8I GTNNAC 6 cut(s) 163, 187, 201, 253, 326, 480
Hpy99I CGWCG 3 cut(s) 311, 406, 839
HpyAV CCTTC 2 cut(s) 56, 109
HpyCH4III ACNGT 3 cut(s) 58, 250, 430
HpyCH4IV ACGT 2 cut(s) 404, 474
HpyCH4V TGCA 3 cut(s) 367, 797, 827
HpyF10VI GCNNNNNNNGC 6 cut(s) 282, 303, 312, 699, 706, 824
HpyF3I CTNAG 2 cut(s) 281, 687
HpySE526I ACGT 2 cut(s) 404, 474
Hsp92II CATG 3 cut(s) 199, 679, 740
HspAI GCGC 8 cut(s) 297, 360, 487, 575, 635, 663, 698, 700
Ksp22I TGATCA 1 cut(s) 435
KspI CCGCGG 1 cut(s) 274
Kzo9I GATC 1 cut(s) 435
LmnI GCTCC 3 cut(s) 174, 236, 557
Lsp1109I GCAGC 3 cut(s) 365, 379, 649
LweI GCATC 1 cut(s) 481
MaeII ACGT 2 cut(s) 404, 474
MaeIII GTNAC 1 cut(s) 332
MalI GATC 1 cut(s) 437
MbiI CCGCTC 1 cut(s) 315
MboI GATC 1 cut(s) 435
MboII GAAGA 3 cut(s) 97, 253, 799
MhlI GDGCHC 2 cut(s) 660, 783
MluCI AATT 1 cut(s) 397
MlyI GAGTC 5 cut(s) 161, 331, 461, 604, 819
MmeI TCCRAC 1 cut(s) 603
MseI TTAA 2 cut(s) 8, 93
MslI CAYNNNNRTG 1 cut(s) 750
MspA1I CMGCKG 1 cut(s) 273
MspI CCGG 4 cut(s) 137, 228, 516, 555
MspR9I CCNGG 9 cut(s) 137, 138, 182, 228, 242, 484, 556, 566, 611
MvaI CCWGG 5 cut(s) 182, 242, 484, 566, 611
MvnI CGCG 7 cut(s) 273, 362, 489, 635, 665, 698, 700
MwoI GCNNNNNNNGC 6 cut(s) 282, 303, 312, 699, 706, 824
NciI CCSGG 4 cut(s) 137, 138, 228, 556
NdeII GATC 1 cut(s) 435
NlaIII CATG 3 cut(s) 199, 679, 740
NlaIV GGNNCC 5 cut(s) 232, 514, 526, 553, 658
NmeAIII GCCGAG 1 cut(s) 170
NspI RCATGY 1 cut(s) 679
PaeR7I CTCGAG 2 cut(s) 371, 782
PagI TCATGA 1 cut(s) 736
PauI GCGCGC 1 cut(s) 698
PciI ACATGT 1 cut(s) 675
PflFI GACNNNGTC 1 cut(s) 248
PflMI CCANNNNNTGG 2 cut(s) 571, 666
PfoI TCCNGGA 1 cut(s) 554
PkrI GCNGC 7 cut(s) 272, 275, 356, 359, 369, 380, 639
PleI GAGTC 5 cut(s) 160, 330, 461, 603, 818
PpsI GAGTC 5 cut(s) 160, 330, 461, 603, 818
PpuMI RGGWCCY 1 cut(s) 525
PscI ACATGT 1 cut(s) 675
PshAI GACNNNNGTC 1 cut(s) 594
Psp124BI GAGCTC 1 cut(s) 783
Psp5II RGGWCCY 1 cut(s) 525
Psp6I CCWGG 5 cut(s) 180, 240, 482, 564, 609
PspEI GGTNACC 1 cut(s) 332
PspFI CCCAGC 3 cut(s) 120, 499, 659
PspGI CCWGG 5 cut(s) 180, 240, 482, 564, 609
PspN4I GGNNCC 5 cut(s) 232, 514, 526, 553, 658
PspOMI GGGCCC 1 cut(s) 656
PspPI GGNCC 4 cut(s) 513, 525, 656, 657
PspPPI RGGWCCY 1 cut(s) 525
PspXI VCTCGAGB 1 cut(s) 371
PsyI GACNNNGTC 1 cut(s) 248
PteI GCGCGC 1 cut(s) 698
RsaI GTAC 2 cut(s) 392, 539
RsaNI GTAC 2 cut(s) 391, 538
RseI CAYNNNNRTG 1 cut(s) 750
SacI GAGCTC 1 cut(s) 783
SacII CCGCGG 1 cut(s) 274
SaqAI TTAA 2 cut(s) 8, 93
SatI GCNGC 7 cut(s) 271, 274, 355, 358, 368, 379, 638
Sau3AI GATC 1 cut(s) 435
Sau96I GGNCC 4 cut(s) 513, 525, 656, 657
SchI GAGTC 5 cut(s) 161, 331, 461, 604, 819
ScrFI CCNGG 9 cut(s) 137, 138, 182, 228, 242, 484, 556, 566, 611
SduI GDGCHC 2 cut(s) 660, 783
SfaNI GCATC 1 cut(s) 481
SfcI CTRYAG 1 cut(s) 529
Sfr274I CTCGAG 2 cut(s) 371, 782
Sfr303I CCGCGG 1 cut(s) 274
SgrBI CCGCGG 1 cut(s) 274
SinI GGWCC 2 cut(s) 513, 525
SlaI CTCGAG 2 cut(s) 371, 782
SmaI CCCGGG 1 cut(s) 138
SmiMI CAYNNNNRTG 1 cut(s) 750
SmlI CTYRAG 3 cut(s) 371, 592, 782
SmoI CTYRAG 3 cut(s) 371, 592, 782
Sse9I AATT 1 cut(s) 397
SsiI CCGC 7 cut(s) 81, 271, 273, 313, 354, 357, 732
SspI AATATT 1 cut(s) 801
SstI GAGCTC 1 cut(s) 783
StyD4I CCNGG 9 cut(s) 135, 136, 180, 226, 240, 482, 554, 564, 609
TaaI ACNGT 3 cut(s) 58, 250, 430
TaiI ACGT 2 cut(s) 407, 477
TaqI TCGA 4 cut(s) 372, 401, 455, 783
TasI AATT 1 cut(s) 397
TauI GCSGC 4 cut(s) 273, 276, 357, 360
Tru1I TTAA 2 cut(s) 8, 93
Tru9I TTAA 2 cut(s) 8, 93
TscAI CASTG 2 cut(s) 584, 834
TseI GCWGC 3 cut(s) 367, 378, 637
TspMI CCCGGG 1 cut(s) 136
TspRI CASTG 2 cut(s) 584, 834
Tth111I GACNNNGTC 1 cut(s) 248
Van91I CCANNNNNTGG 2 cut(s) 571, 666
VpaK11BI GGWCC 2 cut(s) 513, 525
XceI RCATGY 1 cut(s) 679
XhoI CTCGAG 2 cut(s) 371, 782
XmaI CCCGGG 1 cut(s) 136
XmiI GTMKAC 1 cut(s) 252
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.