Prupe.1G343500_v2.0.a1

Chromosome segregation in meiosis protein 3-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
32214006 .. 32216522
2517 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G343500.1

Sequence Viewer

Length: 906 bp
ATGGACAAGGCACCAGCAACCGGATGCTACAAGTGCGGCCGACCAGGCCACTGGTCACGTGACTGCCCTTCCTCCGCCCCTGCCCCAAATTCCAATTCTAACCCCGATCCTAATCCCAATCCCAATCCCAATCCTAACCCTAACCCTAAGCCTACCAATCCCAATTCCTCTTCTTATTCTTTCAAGAGCGGTACTGGTGTAGGAGGAAGCGGTGCTTCGAAGGCGAAAAAGGTGTCAGTTCCGAAGACTAGGCCGAAGCTGACCCCGCAGCTGCTTCTCTCAGATGATGGCCTCGGCTATGTCCTCCGCCACTTCCCTCGCGCTTTCAAGTACCGTGGCCGCGGAAACGAGGTTAGAGATTTGGGGAACCTAATTGGGCTGTACACCGAATGGCACTCACGTTTGCTCCCATATTACTCATTTGATCAGTTTGTTCATAAGGTCGAACAAGTTGCTTCCACTAGACAAGTAAAGATGTCTCTTAGAGAATTGAGAGAAAGAGTTGCAAGTGGAGGAGACCCGACAAAGTTGCGTGAACCACCAGTCGAACAAGGCAATCCAAATGATCAACAGGAAACCTTGAACCCTGAGGGACCAAGCCATCAGCCGGGAGGTTTGTCTTCAGGGAACCATGATGCTGATGATATGCAGGAAGATATGCTTCACGAAATTTACGAGAAAGCCACTGAAGAACCCTCTGAGCATTTGCATGGTGATATGGTTGCTGCTAGTATATCTGCACCTGGTAGTTTTCTGAAAGAATTAACCAATCAATTTCCGAATAATGAAGCTAGTGAATCCAAGGAAAATCAGATGACAGATGAACAGAGAGCACGAATGGAAGCTAGCAGATTGAAGGCCCTTGAGAAAGCTGCAGCAAGGCGCCGCCAATTGCAAGTGGCTTGA
Functional Annotation

Protein Analysis

302

Amino Acids

33.13

Weight (kDa)

7.76

Isoelectric Point (pI)

39.86

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0010919)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 10, 882
AccBSI CCGCTC 1 cut(s) 189
AccII CGCG 2 cut(s) 321, 342
AciI CCGC 9 cut(s) 36, 75, 189, 210, 266, 307, 340, 342, 886
AclWI GGATC 1 cut(s) 101
AcoI YGGCCR 2 cut(s) 37, 337
AcsI RAATTY 2 cut(s) 88, 669
AcuI CTGAAG 2 cut(s) 606, 708
AcvI CACGTG 1 cut(s) 59
AcyI GRCGYC 1 cut(s) 883
AfaI GTAC 3 cut(s) 193, 332, 383
AfiI CCNNNNNNNGG 2 cut(s) 20, 607
AgsI TTSAA 4 cut(s) 184, 328, 583, 856
AjnI CCWGG 2 cut(s) 43, 742
AjuI GAANNNNNNNTTGG 2 cut(s) 79, 111
AluBI AGCT 5 cut(s) 259, 271, 791, 845, 872
AluI AGCT 5 cut(s) 259, 271, 791, 845, 872
Alw21I GWGCWC 1 cut(s) 835
Alw26I GTCTC 2 cut(s) 483, 510
AlwI GGATC 1 cut(s) 101
AoxI GGCC 6 cut(s) 37, 46, 251, 289, 337, 858
ApeKI GCWGC 5 cut(s) 268, 271, 725, 872, 875
ApoI RAATTY 2 cut(s) 88, 669
ArsI GACNNNNNNTTYG 2 cut(s) 218, 250
AspLEI GCGC 2 cut(s) 323, 885
AspS9I GGNCC 2 cut(s) 593, 859
AsuC2I CCSGG 1 cut(s) 609
AsuHPI GGTGA 1 cut(s) 725
AsuII TTCGAA 1 cut(s) 218
AsuNHI GCTAGC 1 cut(s) 845
AvaII GGWCC 1 cut(s) 593
AxyI CCTNAGG 1 cut(s) 588
BaeI ACNNNNGTAYC 2 cut(s) 183, 216
BanI GGYRCC 2 cut(s) 10, 882
BbrPI CACGTG 1 cut(s) 59
BbsI GAAGAC 2 cut(s) 251, 612
Bbv12I GWGCWC 1 cut(s) 835
BbvI GCAGC 5 cut(s) 258, 280, 712, 859, 887
BccI CCATC 2 cut(s) 281, 609
BcgI CGANNNNNNTGC 4 cut(s) 434, 468, 511, 545
BciT130I CCWGG 2 cut(s) 45, 744
BclI TGATCA 2 cut(s) 424, 565
BcnI CCSGG 1 cut(s) 609
BcoDI GTCTC 2 cut(s) 483, 510
BfaI CTAG 5 cut(s) 249, 462, 729, 792, 846
BfmI CTRYAG 1 cut(s) 873
BfoI RGCGCY 1 cut(s) 886
BglI GCCNNNNNGGC 1 cut(s) 45
BisI GCNGC 8 cut(s) 37, 269, 272, 340, 726, 873, 876, 886
BlsI GCNGC 8 cut(s) 38, 270, 273, 341, 727, 874, 877, 887
Bme1390I CCNGG 3 cut(s) 45, 609, 744
Bme18I GGWCC 1 cut(s) 593
BmgT120I GGNCC 2 cut(s) 593, 859
BmiI GGNNCC 5 cut(s) 12, 368, 594, 629, 884
BmrFI CCNGG 3 cut(s) 45, 609, 744
BmsI GCATC 2 cut(s) 14, 625
BmtI GCTAGC 1 cut(s) 849
BpiI GAAGAC 2 cut(s) 251, 612
Bpu10I CCTNAGC 1 cut(s) 147
Bpu14I TTCGAA 1 cut(s) 218
BpuEI CTTGAG 1 cut(s) 884
BpuMI CCSGG 1 cut(s) 609
BsaAI YACGTR 1 cut(s) 59
BsaBI GATNNNNATC 1 cut(s) 111
BsaHI GRCGYC 1 cut(s) 883
BsaI GGTCTC 1 cut(s) 510
BsaJI CCNNGG 4 cut(s) 292, 334, 340, 801
BsaWI WCCGGW 1 cut(s) 20
BsaXI ACNNNNNCTCC 2 cut(s) 390, 420
Bsc4I CCNNNNNNNGG 2 cut(s) 20, 607
Bse1I ACTGG 3 cut(s) 56, 199, 542
Bse21I CCTNAGG 1 cut(s) 588
Bse8I GATNNNNATC 1 cut(s) 111
BseBI CCWGG 2 cut(s) 45, 744
BseDI CCNNGG 4 cut(s) 292, 334, 340, 801
BseGI GGATG 1 cut(s) 29
BseJI GATNNNNATC 1 cut(s) 111
BseLI CCNNNNNNNGG 2 cut(s) 20, 607
BseMII CTCAG 3 cut(s) 294, 579, 690
BseNI ACTGG 3 cut(s) 56, 199, 542
BseRI GAGGAG 1 cut(s) 528
BseX3I CGGCCG 1 cut(s) 37
BseXI GCAGC 5 cut(s) 258, 280, 712, 859, 887
BsgI GTGCAG 1 cut(s) 723
Bsh1236I CGCG 2 cut(s) 321, 342
Bsh1285I CGRYCG 1 cut(s) 40
BshFI GGCC 6 cut(s) 39, 48, 253, 291, 339, 860
BshNI GGYRCC 2 cut(s) 10, 882
BsiEI CGRYCG 1 cut(s) 40
BsiHKAI GWGCWC 1 cut(s) 835
BsiSI CCGG 2 cut(s) 21, 608
BslFI GGGAC 1 cut(s) 606
BslI CCNNNNNNNGG 2 cut(s) 20, 607
BsmAI GTCTC 2 cut(s) 483, 510
BsmFI GGGAC 1 cut(s) 606
BsnI GGCC 6 cut(s) 39, 48, 253, 291, 339, 860
Bso31I GGTCTC 1 cut(s) 510
Bsp119I TTCGAA 1 cut(s) 218
Bsp1286I GDGCHC 1 cut(s) 835
Bsp1407I TGTACA 1 cut(s) 381
Bsp143I GATC 3 cut(s) 106, 424, 565
BspACI CCGC 9 cut(s) 36, 75, 189, 210, 266, 307, 340, 342, 886
BspANI GGCC 6 cut(s) 39, 48, 253, 291, 339, 860
BspCNI CTCAG 3 cut(s) 293, 580, 691
BspFNI CGCG 2 cut(s) 321, 342
BspLI GGNNCC 5 cut(s) 12, 368, 594, 629, 884
BspMAI CTGCAG 1 cut(s) 877
BspOI GCTAGC 1 cut(s) 849
BspPI GGATC 1 cut(s) 101
BspT104I TTCGAA 1 cut(s) 218
BspT107I GGYRCC 2 cut(s) 10, 882
BspTNI GGTCTC 1 cut(s) 510
BsrBI CCGCTC 1 cut(s) 189
BsrGI TGTACA 1 cut(s) 381
BsrI ACTGG 3 cut(s) 56, 199, 542
BssECI CCNNGG 4 cut(s) 292, 334, 340, 801
BssMI GATC 3 cut(s) 106, 424, 565
BssNI GRCGYC 1 cut(s) 883
BssT1I CCWWGG 1 cut(s) 801
Bst2UI CCWGG 2 cut(s) 45, 744
Bst4CI ACNGT 1 cut(s) 335
Bst6I CTCTTC 1 cut(s) 175
BstACI GRCGYC 1 cut(s) 883
BstAUI TGTACA 1 cut(s) 381
BstBAI YACGTR 1 cut(s) 59
BstBI TTCGAA 1 cut(s) 218
BstC8I GCNNGC 1 cut(s) 847
BstDEI CTNAG 5 cut(s) 147, 280, 482, 588, 699
BstDSI CCRYGG 2 cut(s) 334, 340
BstF5I GGATG 1 cut(s) 29
BstFNI CGCG 2 cut(s) 321, 342
BstH2I RGCGCY 1 cut(s) 886
BstHHI GCGC 2 cut(s) 323, 885
BstKTI GATC 3 cut(s) 109, 427, 568
BstMAI GTCTC 2 cut(s) 483, 510
BstMBI GATC 3 cut(s) 106, 424, 565
BstMCI CGRYCG 1 cut(s) 40
BstMWI GCNNNNNNNGC 4 cut(s) 33, 45, 221, 265
BstNI CCWGG 2 cut(s) 45, 744
BstSCI CCNGG 3 cut(s) 43, 607, 742
BstSFI CTRYAG 1 cut(s) 873
BstUI CGCG 2 cut(s) 321, 342
BstV1I GCAGC 5 cut(s) 258, 280, 712, 859, 887
BstV2I GAAGAC 2 cut(s) 251, 612
BstXI CCANNNNNNTGG 1 cut(s) 51
BstZI CGGCCG 1 cut(s) 37
Bsu36I CCTNAGG 1 cut(s) 588
BsuRI GGCC 6 cut(s) 39, 48, 253, 291, 339, 860
BtgI CCRYGG 2 cut(s) 334, 340
BtsCI GGATG 1 cut(s) 29
BtsIMutI CAGTG 2 cut(s) 49, 684
Cac8I GCNNGC 1 cut(s) 847
CfoI GCGC 2 cut(s) 323, 885
Cfr13I GGNCC 2 cut(s) 593, 859
Cfr42I CCGCGG 1 cut(s) 343
CsiI ACCWGGT 1 cut(s) 742
Csp6I GTAC 3 cut(s) 192, 331, 382
CspCI CAANNNNNGTGG 2 cut(s) 316, 351
CviAII CATG 2 cut(s) 632, 710
CviQI GTAC 3 cut(s) 192, 331, 382
DdeI CTNAG 5 cut(s) 147, 280, 482, 588, 699
DinI GGCGCC 1 cut(s) 884
DpnI GATC 3 cut(s) 108, 426, 567
DpnII GATC 3 cut(s) 106, 424, 565
EaeI YGGCCR 2 cut(s) 37, 337
EagI CGGCCG 1 cut(s) 37
Eam1104I CTCTTC 1 cut(s) 175
EarI CTCTTC 1 cut(s) 175
EciI GGCGGA 2 cut(s) 64, 296
EclXI CGGCCG 1 cut(s) 37
Eco130I CCWWGG 1 cut(s) 801
Eco31I GGTCTC 1 cut(s) 510
Eco47I GGWCC 1 cut(s) 593
Eco52I CGGCCG 1 cut(s) 37
Eco57I CTGAAG 2 cut(s) 606, 708
Eco72I CACGTG 1 cut(s) 59
Eco81I CCTNAGG 1 cut(s) 588
EcoO109I RGGNCCY 1 cut(s) 859
EcoRII CCWGG 2 cut(s) 43, 742
EcoT14I CCWWGG 1 cut(s) 801
EgeI GGCGCC 1 cut(s) 884
EheI GGCGCC 1 cut(s) 884
ErhI CCWWGG 1 cut(s) 801
FaeI CATG 2 cut(s) 635, 713
FaiI YATR 9 cut(s) 300, 412, 438, 633, 647, 659, 711, 719, 734
FalI AAGNNNNNCTT 4 cut(s) 199, 231, 645, 677
FaqI GGGAC 1 cut(s) 606
FatI CATG 2 cut(s) 631, 709
FauI CCCGC 1 cut(s) 273
FbaI TGATCA 2 cut(s) 424, 565
Fnu4HI GCNGC 8 cut(s) 37, 269, 272, 340, 726, 873, 876, 886
FokI GGATG 1 cut(s) 36
Fsp4HI GCNGC 8 cut(s) 37, 269, 272, 340, 726, 873, 876, 886
FspBI CTAG 5 cut(s) 249, 462, 729, 792, 846
GlaI GCGC 2 cut(s) 322, 884
GluI GCNGC 8 cut(s) 37, 269, 272, 340, 726, 873, 876, 886
HaeII RGCGCY 1 cut(s) 886
HaeIII GGCC 6 cut(s) 39, 48, 253, 291, 339, 860
HapII CCGG 2 cut(s) 21, 608
HhaI GCGC 2 cut(s) 323, 885
Hin1I GRCGYC 1 cut(s) 883
Hin1II CATG 2 cut(s) 635, 713
Hin6I GCGC 2 cut(s) 321, 883
HinP1I GCGC 2 cut(s) 321, 883
HinfI GANTC 1 cut(s) 797
HpaII CCGG 2 cut(s) 21, 608
HphI GGTGA 1 cut(s) 725
Hpy166II GTNNAC 2 cut(s) 384, 536
Hpy188I TCNGA 6 cut(s) 243, 283, 700, 756, 780, 813
Hpy188III TCNNGA 2 cut(s) 184, 665
Hpy8I GTNNAC 2 cut(s) 384, 536
HpyAV CCTTC 3 cut(s) 78, 214, 850
HpyCH4III ACNGT 1 cut(s) 335
HpyCH4IV ACGT 2 cut(s) 58, 400
HpyCH4V TGCA 6 cut(s) 506, 649, 709, 740, 875, 895
HpyF10VI GCNNNNNNNGC 4 cut(s) 33, 45, 221, 265
HpyF3I CTNAG 5 cut(s) 147, 280, 482, 588, 699
HpySE526I ACGT 2 cut(s) 58, 400
Hsp92I GRCGYC 1 cut(s) 883
Hsp92II CATG 2 cut(s) 635, 713
HspAI GCGC 2 cut(s) 321, 883
KasI GGCGCC 1 cut(s) 882
Ksp22I TGATCA 2 cut(s) 424, 565
KspI CCGCGG 1 cut(s) 343
Kzo9I GATC 3 cut(s) 106, 424, 565
LmnI GCTCC 1 cut(s) 411
Lsp1109I GCAGC 5 cut(s) 258, 280, 712, 859, 887
LweI GCATC 2 cut(s) 14, 625
MabI ACCWGGT 1 cut(s) 742
MaeI CTAG 5 cut(s) 249, 462, 729, 792, 846
MaeII ACGT 2 cut(s) 58, 400
MaeIII GTNAC 2 cut(s) 54, 59
MalI GATC 3 cut(s) 108, 426, 567
MbiI CCGCTC 1 cut(s) 189
MboI GATC 3 cut(s) 106, 424, 565
MboII GAAGA 5 cut(s) 162, 256, 612, 665, 701
MfeI CAATTG 1 cut(s) 890
MhlI GDGCHC 1 cut(s) 835
MluCI AATT 9 cut(s) 88, 94, 163, 372, 488, 669, 761, 773, 890
Mly113I GGCGCC 1 cut(s) 883
MseI TTAA 1 cut(s) 764
MslI CAYNNNNRTG 1 cut(s) 708
MspA1I CMGCKG 2 cut(s) 271, 342
MspI CCGG 2 cut(s) 21, 608
MspR9I CCNGG 3 cut(s) 45, 609, 744
MunI CAATTG 1 cut(s) 890
MvaI CCWGG 2 cut(s) 45, 744
MvnI CGCG 2 cut(s) 321, 342
MwoI GCNNNNNNNGC 4 cut(s) 33, 45, 221, 265
NarI GGCGCC 1 cut(s) 883
NciI CCSGG 1 cut(s) 609
NdeII GATC 3 cut(s) 106, 424, 565
NheI GCTAGC 1 cut(s) 845
NlaIII CATG 2 cut(s) 635, 713
NlaIV GGNNCC 5 cut(s) 12, 368, 594, 629, 884
NmeAIII GCCGAG 1 cut(s) 273
NmuCI GTSAC 2 cut(s) 54, 59
NspV TTCGAA 1 cut(s) 218
PcsI WCGNNNNNNNCGW 1 cut(s) 672
PfeI GAWTC 1 cut(s) 797
PkrI GCNGC 8 cut(s) 38, 270, 273, 341, 727, 874, 877, 887
PluTI GGCGCC 1 cut(s) 886
PmaCI CACGTG 1 cut(s) 59
PmlI CACGTG 1 cut(s) 59
Ppu21I YACGTR 1 cut(s) 59
Psp6I CCWGG 2 cut(s) 43, 742
PspCI CACGTG 1 cut(s) 59
PspGI CCWGG 2 cut(s) 43, 742
PspN4I GGNNCC 5 cut(s) 12, 368, 594, 629, 884
PspPI GGNCC 2 cut(s) 593, 859
PstI CTGCAG 1 cut(s) 877
PvuII CAGCTG 1 cut(s) 271
RsaI GTAC 3 cut(s) 193, 332, 383
RsaNI GTAC 3 cut(s) 192, 331, 382
RseI CAYNNNNRTG 1 cut(s) 708
SacII CCGCGG 1 cut(s) 343
SaqAI TTAA 1 cut(s) 764
SatI GCNGC 8 cut(s) 37, 269, 272, 340, 726, 873, 876, 886
Sau3AI GATC 3 cut(s) 106, 424, 565
Sau96I GGNCC 2 cut(s) 593, 859
ScrFI CCNGG 3 cut(s) 45, 609, 744
SduI GDGCHC 1 cut(s) 835
SexAI ACCWGGT 1 cut(s) 742
SfaNI GCATC 2 cut(s) 14, 625
SfcI CTRYAG 1 cut(s) 873
SfiI GGCCNNNNNGGCC 1 cut(s) 45
SfoI GGCGCC 1 cut(s) 884
Sfr303I CCGCGG 1 cut(s) 343
SfuI TTCGAA 1 cut(s) 218
SgrBI CCGCGG 1 cut(s) 343
SinI GGWCC 1 cut(s) 593
SmiMI CAYNNNNRTG 1 cut(s) 708
SmlI CTYRAG 1 cut(s) 863
SmoI CTYRAG 1 cut(s) 863
Sse9I AATT 9 cut(s) 88, 94, 163, 372, 488, 669, 761, 773, 890
SsiI CCGC 9 cut(s) 36, 75, 189, 210, 266, 307, 340, 342, 886
SspDI GGCGCC 1 cut(s) 882
SspMI CTAG 5 cut(s) 249, 462, 729, 792, 846
StyD4I CCNGG 3 cut(s) 43, 607, 742
StyI CCWWGG 1 cut(s) 801
TaaI ACNGT 1 cut(s) 335
TaiI ACGT 2 cut(s) 61, 403
TaqI TCGA 3 cut(s) 218, 444, 546
TasI AATT 9 cut(s) 88, 94, 163, 372, 488, 669, 761, 773, 890
TatI WGTACW 1 cut(s) 381
TauI GCSGC 3 cut(s) 39, 342, 888
TfiI GAWTC 1 cut(s) 797
Tru1I TTAA 1 cut(s) 764
Tru9I TTAA 1 cut(s) 764
TscAI CASTG 2 cut(s) 56, 691
TseFI GTSAC 2 cut(s) 54, 59
TseI GCWGC 5 cut(s) 268, 271, 725, 872, 875
Tsp45I GTSAC 2 cut(s) 54, 59
TspDTI ATGAA 3 cut(s) 425, 801, 837
TspRI CASTG 2 cut(s) 56, 691
VpaK11BI GGWCC 1 cut(s) 593
XapI RAATTY 2 cut(s) 88, 669
XspI CTAG 5 cut(s) 249, 462, 729, 792, 846
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.