Prupe.1G350900_v2.0.a1

No description available

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
32654999 .. 32658806
3808 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G350900.1

Sequence Viewer

Length: 1383 bp
ATGCCATCTTCATCGCTTCGATCTTCTTCGGAGTCGGAGAGCAGCAGCCAGGAGTACTTGCAAAGGCTCTTAGACTCGGCCCGCCCCTTCCTCCGTGGCGAGCTGGAGGCGATCGACGAGAATTTGCCTTCACTTGTGGGTGTGCTGCGCTCAGTTGGAGCAGGTGAGTGCTGGCACAAGCATGGCACCTTTCTTGAACACCTGGTTGACATATACCGCATTCTCAAGATATGGAAAGCCCAAGATTCTGTCTGCCTTTGCGGCCTCTTTCACTCTGCTTATTCCAATTCCTATGTCAACCTCGCCATTTTTGATCCCTCAACAGGCCGTGAAGTGGTCCGCGGCCATGTTGGGGATGCTGCAGAACGCTTGATTCACTTCTTCTGTATCGTCCCAAGACAGTCTCTAATTCACGATGACCTTTTGTTCCACTACACAGACTCGGAGCTCGTTGAACATCTCAAACAATCTGAGGTATCGCTTGCTGCCCCTGCCACTAATTCTAATTCTAATAATCAGGATCAGATTCAGGAGGATCACTCAGCAGCGCCTTGGAGTTGGAGGAAGAAACTGCAAACTCTTGTTCCTGCTAATGGGATTACAGTGAAGCACATAAAGACCGGGGAAGATGTCTTGGTCTCAAGGAGGGTAGTTGCAGTGTTTCTTATGATGACAATAGCAGATTTCAGTGACCAACTTTTTGGTTTCCAGGACGAGCTGTTTGATAACATAGATGGCCGCCTTGAGTTTAAGGGCAACAACTTTGCAGCTCTGTGGCCTGGCGATGGCAAGCCGGGGCTTTGGATGAATTCCATATCAAGAATGGCTGCAATATACACTCTGATGGTGAGAGAGGAAGCGATTTTTGTTGAAGAGAGGAAAATTACTAGTGCTACTGCAACTGGAGACAAGTTGGACAAATCTAGAGATGAAGATATTGAGCTGGTGGTGCCACCAGTTTTCGACAAGTGCACAAGGGTTCTGGATGCCAAGGAGCAATTAGCTGCAAGGGACTTGTACTGGGAAGCTGTTTGTGGTATGTCGTCGTCGTCTTCTAAGAGAGAGATTGTTGATGATGGTAAAGGAGCTGATGATGAGGAAGCGACGGTGGTTCTGTTGAGGTCGTGTGTTGAGAGAAACCCTTTTATTGGGGAGCCACATGTGGTGTTGGCTCAGGTTTATTTGAGAAAAGCAAAGTTTGAGGAGGCAGAGAGAGAGGCAGAGAGAGGGCTGACTCTGATGTTGGAATGGGGGAGTGCTTGGGACAAGAGGATGTCTTGGGAAGGATGGATTGCTTGGGCAAGAGTGCTGCTCATGAAGGCAAGAGACAGATCATGGCCACAAACTTCCTGGGGCATCCTCAACTTGGGCCTTGTCAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

461

Amino Acids

51.91

Weight (kDa)

5.31

Isoelectric Point (pI)

49.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 152
Acc36I ACCTGC 1 cut(s) 152
AccB1I GGYRCC 2 cut(s) 185, 949
AccII CGCG 1 cut(s) 342
AciI CCGC 6 cut(s) 82, 217, 261, 340, 342, 739
AclWI GGATC 3 cut(s) 308, 528, 543
AcoI YGGCCR 3 cut(s) 343, 736, 1337
AcsI RAATTY 2 cut(s) 121, 808
AfaI GTAC 2 cut(s) 56, 1019
AfiI CCNNNNNNNGG 7 cut(s) 323, 334, 352, 593, 785, 1148, 1366
AflIII ACRYGT 1 cut(s) 1159
AgsI TTSAA 3 cut(s) 197, 455, 872
AhlI ACTAGT 1 cut(s) 887
AjnI CCWGG 5 cut(s) 48, 201, 708, 778, 1349
AluBI AGCT 8 cut(s) 103, 448, 718, 770, 943, 1004, 1028, 1088
AluI AGCT 8 cut(s) 103, 448, 718, 770, 943, 1004, 1028, 1088
Alw21I GWGCWC 2 cut(s) 450, 974
Alw26I GTCTC 4 cut(s) 408, 643, 900, 1320
Alw44I GTGCAC 1 cut(s) 970
AlwI GGATC 3 cut(s) 308, 528, 543
AoxI GGCC 8 cut(s) 78, 262, 325, 343, 736, 776, 1337, 1369
ApaLI GTGCAC 1 cut(s) 970
ApoI RAATTY 2 cut(s) 121, 808
ArsI GACNNNNNNTTYG 4 cut(s) 683, 704, 715, 736
AspLEI GCGC 2 cut(s) 150, 550
AspS9I GGNCC 3 cut(s) 79, 337, 1369
AsuC2I CCSGG 2 cut(s) 622, 795
AsuHPI GGTGA 2 cut(s) 176, 859
AvaII GGWCC 1 cut(s) 337
BaeGI GKGCMC 1 cut(s) 974
BalI TGGCCA 1 cut(s) 1339
BanI GGYRCC 2 cut(s) 185, 949
BanII GRGCYC 1 cut(s) 450
BbsI GAAGAC 1 cut(s) 1044
Bbv12I GWGCWC 2 cut(s) 450, 974
BccI CCATC 6 cut(s) 13, 728, 779, 838, 1070, 1281
BceAI ACGGC 1 cut(s) 312
BciT130I CCWGG 5 cut(s) 50, 203, 710, 780, 1351
BcnI CCSGG 2 cut(s) 622, 795
BcoDI GTCTC 4 cut(s) 408, 643, 900, 1320
BcuI ACTAGT 1 cut(s) 887
BfaI CTAG 2 cut(s) 888, 924
BfmI CTRYAG 1 cut(s) 360
BfoI RGCGCY 1 cut(s) 551
BfuAI ACCTGC 1 cut(s) 152
BglI GCCNNNNNGGC 1 cut(s) 261
BmcAI AGTACT 1 cut(s) 56
Bme1390I CCNGG 7 cut(s) 50, 203, 622, 710, 780, 795, 1351
Bme18I GGWCC 1 cut(s) 337
BmgT120I GGNCC 3 cut(s) 79, 337, 1369
BmiI GGNNCC 3 cut(s) 187, 951, 1155
BmrFI CCNGG 7 cut(s) 50, 203, 622, 710, 780, 795, 1351
BmrI ACTGGG 1 cut(s) 1030
BmsI GCATC 3 cut(s) 346, 976, 1365
BmuI ACTGGG 1 cut(s) 1030
BpiI GAAGAC 1 cut(s) 1044
BplI GAGNNNNNCTC 4 cut(s) 524, 556, 1296, 1328
BpmI CTGGAG 2 cut(s) 125, 924
Bpu10I CCTNAGC 1 cut(s) 1173
BpuEI CTTGAG 3 cut(s) 209, 625, 764
BpuMI CCSGG 2 cut(s) 622, 795
BsaI GGTCTC 1 cut(s) 643
BsaJI CCNNGG 7 cut(s) 94, 340, 551, 621, 794, 990, 1350
Bsc4I CCNNNNNNNGG 7 cut(s) 323, 334, 352, 593, 785, 1148, 1366
Bse1I ACTGG 3 cut(s) 907, 956, 1025
BseBI CCWGG 5 cut(s) 50, 203, 710, 780, 1351
BseDI CCNNGG 7 cut(s) 94, 340, 551, 621, 794, 990, 1350
BseGI GGATG 6 cut(s) 361, 810, 991, 1278, 1292, 1356
BseLI CCNNNNNNNGG 7 cut(s) 323, 334, 352, 593, 785, 1148, 1366
BseMII CTCAG 4 cut(s) 165, 462, 555, 1187
BseNI ACTGG 3 cut(s) 907, 956, 1025
BseRI GAGGAG 1 cut(s) 1217
BseSI GKGCMC 1 cut(s) 974
Bsh1236I CGCG 1 cut(s) 342
Bsh1285I CGRYCG 1 cut(s) 114
BshFI GGCC 8 cut(s) 80, 264, 327, 345, 738, 778, 1339, 1371
BshNI GGYRCC 2 cut(s) 185, 949
BsiEI CGRYCG 1 cut(s) 114
BsiHKAI GWGCWC 2 cut(s) 450, 974
BsiSI CCGG 2 cut(s) 621, 794
BslFI GGGAC 3 cut(s) 377, 1025, 1277
BslI CCNNNNNNNGG 7 cut(s) 323, 334, 352, 593, 785, 1148, 1366
BsmAI GTCTC 4 cut(s) 408, 643, 900, 1320
BsmFI GGGAC 3 cut(s) 377, 1025, 1277
BsmI GAATGC 1 cut(s) 219
BsnI GGCC 8 cut(s) 80, 264, 327, 345, 738, 778, 1339, 1371
Bso31I GGTCTC 1 cut(s) 643
Bsp1286I GDGCHC 2 cut(s) 450, 974
Bsp143I GATC 6 cut(s) 20, 111, 313, 520, 535, 1331
BspACI CCGC 6 cut(s) 82, 217, 261, 340, 342, 739
BspANI GGCC 8 cut(s) 80, 264, 327, 345, 738, 778, 1339, 1371
BspCNI CTCAG 4 cut(s) 164, 463, 554, 1186
BspFNI CGCG 1 cut(s) 342
BspHI TCATGA 1 cut(s) 1314
BspLI GGNNCC 3 cut(s) 187, 951, 1155
BspMAI CTGCAG 1 cut(s) 364
BspMI ACCTGC 1 cut(s) 152
BspPI GGATC 3 cut(s) 308, 528, 543
BspT107I GGYRCC 2 cut(s) 185, 949
BspTNI GGTCTC 1 cut(s) 643
BsrI ACTGG 3 cut(s) 907, 956, 1025
BssECI CCNNGG 7 cut(s) 94, 340, 551, 621, 794, 990, 1350
BssMI GATC 6 cut(s) 20, 111, 313, 520, 535, 1331
BssT1I CCWWGG 2 cut(s) 551, 990
Bst2UI CCWGG 5 cut(s) 50, 203, 710, 780, 1351
Bst4CI ACNGT 3 cut(s) 402, 604, 1108
Bst6I CTCTTC 1 cut(s) 867
BstC8I GCNNGC 5 cut(s) 82, 101, 173, 483, 791
BstDEI CTNAG 6 cut(s) 70, 151, 471, 541, 1056, 1173
BstDSI CCRYGG 2 cut(s) 94, 340
BstF5I GGATG 6 cut(s) 361, 810, 991, 1278, 1292, 1356
BstFNI CGCG 1 cut(s) 342
BstH2I RGCGCY 1 cut(s) 551
BstHHI GCGC 2 cut(s) 150, 550
BstKTI GATC 6 cut(s) 23, 114, 316, 523, 538, 1334
BstMAI GTCTC 4 cut(s) 408, 643, 900, 1320
BstMBI GATC 6 cut(s) 20, 111, 313, 520, 535, 1331
BstMCI CGRYCG 1 cut(s) 114
BstMWI GCNNNNNNNGC 3 cut(s) 261, 491, 949
BstNI CCWGG 5 cut(s) 50, 203, 710, 780, 1351
BstNSI RCATGY 1 cut(s) 1163
BstSCI CCNGG 7 cut(s) 48, 201, 620, 708, 778, 793, 1349
BstSFI CTRYAG 1 cut(s) 360
BstSLI GKGCMC 1 cut(s) 974
BstUI CGCG 1 cut(s) 342
BstV2I GAAGAC 1 cut(s) 1044
BstXI CCANNNNNNTGG 1 cut(s) 701
BsuRI GGCC 8 cut(s) 80, 264, 327, 345, 738, 778, 1339, 1371
BtgI CCRYGG 2 cut(s) 94, 340
BtgZI GCGATG 1 cut(s) 798
BtsCI GGATG 6 cut(s) 361, 810, 991, 1278, 1292, 1356
BtsI GCAGTG 1 cut(s) 663
BtsIMutI CAGTG 3 cut(s) 609, 663, 694
BveI ACCTGC 1 cut(s) 152
Cac8I GCNNGC 5 cut(s) 82, 101, 173, 483, 791
CciI TCATGA 1 cut(s) 1314
CfoI GCGC 2 cut(s) 150, 550
Cfr13I GGNCC 3 cut(s) 79, 337, 1369
Cfr42I CCGCGG 1 cut(s) 343
CsiI ACCWGGT 1 cut(s) 201
Csp6I GTAC 2 cut(s) 55, 1018
CviAII CATG 5 cut(s) 182, 347, 1160, 1315, 1335
CviQI GTAC 2 cut(s) 55, 1018
DdeI CTNAG 6 cut(s) 70, 151, 471, 541, 1056, 1173
DpnI GATC 6 cut(s) 22, 113, 315, 522, 537, 1333
DpnII GATC 6 cut(s) 20, 111, 313, 520, 535, 1331
EaeI YGGCCR 3 cut(s) 343, 736, 1337
Eam1104I CTCTTC 1 cut(s) 867
EarI CTCTTC 1 cut(s) 867
Ecl136II GAGCTC 1 cut(s) 448
Eco130I CCWWGG 2 cut(s) 551, 990
Eco24I GRGCYC 1 cut(s) 450
Eco31I GGTCTC 1 cut(s) 643
Eco47I GGWCC 1 cut(s) 337
Eco53kI GAGCTC 1 cut(s) 448
EcoICRI GAGCTC 1 cut(s) 448
EcoRI GAATTC 1 cut(s) 808
EcoRII CCWGG 5 cut(s) 48, 201, 708, 778, 1349
EcoT14I CCWWGG 2 cut(s) 551, 990
EcoT38I GRGCYC 1 cut(s) 450
ErhI CCWWGG 2 cut(s) 551, 990
FaeI CATG 5 cut(s) 185, 350, 1163, 1318, 1338
FaqI GGGAC 3 cut(s) 377, 1025, 1277
FatI CATG 5 cut(s) 181, 346, 1159, 1314, 1334
FauI CCCGC 1 cut(s) 89
FokI GGATG 6 cut(s) 368, 817, 998, 1285, 1299, 1343
FriOI GRGCYC 1 cut(s) 450
FspBI CTAG 2 cut(s) 888, 924
GlaI GCGC 2 cut(s) 149, 549
GsuI CTGGAG 2 cut(s) 125, 924
HaeII RGCGCY 1 cut(s) 551
HaeIII GGCC 8 cut(s) 80, 264, 327, 345, 738, 778, 1339, 1371
HapII CCGG 2 cut(s) 621, 794
HhaI GCGC 2 cut(s) 150, 550
Hin1II CATG 5 cut(s) 185, 350, 1163, 1318, 1338
Hin6I GCGC 2 cut(s) 148, 548
HinP1I GCGC 2 cut(s) 148, 548
HincII GTYRAC 2 cut(s) 208, 298
HindII GTYRAC 2 cut(s) 208, 298
HinfI GANTC 7 cut(s) 32, 74, 245, 373, 440, 526, 1234
HpaII CCGG 2 cut(s) 621, 794
HphI GGTGA 2 cut(s) 176, 859
Hpy166II GTNNAC 3 cut(s) 208, 298, 972
Hpy188I TCNGA 7 cut(s) 31, 37, 445, 472, 525, 843, 1239
Hpy188III TCNNGA 9 cut(s) 194, 226, 413, 518, 530, 819, 924, 983, 1315
Hpy8I GTNNAC 3 cut(s) 208, 298, 972
Hpy99I CGWCG 4 cut(s) 119, 1048, 1051, 1108
HpyAV CCTTC 4 cut(s) 97, 138, 1277, 1312
HpyCH4III ACNGT 3 cut(s) 402, 604, 1108
HpyCH4V TGCA 9 cut(s) 61, 362, 574, 656, 767, 830, 899, 972, 1007
HpyF10VI GCNNNNNNNGC 3 cut(s) 261, 491, 949
HpyF3I CTNAG 6 cut(s) 70, 151, 471, 541, 1056, 1173
Hsp92II CATG 5 cut(s) 185, 350, 1163, 1318, 1338
HspAI GCGC 2 cut(s) 148, 548
KspI CCGCGG 1 cut(s) 343
Kzo9I GATC 6 cut(s) 20, 111, 313, 520, 535, 1331
LmnI GCTCC 5 cut(s) 158, 445, 994, 1085, 1153
LweI GCATC 3 cut(s) 346, 976, 1365
MabI ACCWGGT 1 cut(s) 201
MaeI CTAG 2 cut(s) 888, 924
MaeIII GTNAC 1 cut(s) 689
MalI GATC 6 cut(s) 22, 113, 315, 522, 537, 1333
MboI GATC 6 cut(s) 20, 111, 313, 520, 535, 1331
MboII GAAGA 8 cut(s) 15, 18, 373, 577, 638, 884, 944, 1044
MhlI GDGCHC 2 cut(s) 450, 974
MlsI TGGCCA 1 cut(s) 1339
MluCI AATT 8 cut(s) 121, 286, 408, 499, 505, 808, 882, 998
MluNI TGGCCA 1 cut(s) 1339
MlyI GAGTC 4 cut(s) 41, 68, 434, 1228
MmeI TCCRAC 5 cut(s) 15, 136, 539, 894, 1224
Mox20I TGGCCA 1 cut(s) 1339
MscI TGGCCA 1 cut(s) 1339
MseI TTAA 1 cut(s) 750
MslI CAYNNNNRTG 2 cut(s) 180, 842
Msp20I TGGCCA 1 cut(s) 1339
MspA1I CMGCKG 1 cut(s) 342
MspI CCGG 2 cut(s) 621, 794
MspR9I CCNGG 7 cut(s) 50, 203, 622, 710, 780, 795, 1351
Mva1269I GAATGC 1 cut(s) 219
MvaI CCWGG 5 cut(s) 50, 203, 710, 780, 1351
MvnI CGCG 1 cut(s) 342
MwoI GCNNNNNNNGC 3 cut(s) 261, 491, 949
NciI CCSGG 2 cut(s) 622, 795
NdeII GATC 6 cut(s) 20, 111, 313, 520, 535, 1331
NlaIII CATG 5 cut(s) 185, 350, 1163, 1318, 1338
NlaIV GGNNCC 3 cut(s) 187, 951, 1155
NmeAIII GCCGAG 1 cut(s) 56
NmuCI GTSAC 1 cut(s) 689
NspI RCATGY 1 cut(s) 1163
PagI TCATGA 1 cut(s) 1314
PaqCI CACCTGC 1 cut(s) 152
PciI ACATGT 1 cut(s) 1159
PctI GAATGC 1 cut(s) 219
PfeI GAWTC 3 cut(s) 245, 373, 526
PfoI TCCNGGA 1 cut(s) 708
Ple19I CGATCG 1 cut(s) 114
PleI GAGTC 4 cut(s) 40, 68, 434, 1228
PpsI GAGTC 4 cut(s) 40, 68, 434, 1228
PscI ACATGT 1 cut(s) 1159
Psp124BI GAGCTC 1 cut(s) 450
Psp6I CCWGG 5 cut(s) 48, 201, 708, 778, 1349
PspGI CCWGG 5 cut(s) 48, 201, 708, 778, 1349
PspN4I GGNNCC 3 cut(s) 187, 951, 1155
PspPI GGNCC 3 cut(s) 79, 337, 1369
PstI CTGCAG 1 cut(s) 364
PvuI CGATCG 1 cut(s) 114
RsaI GTAC 2 cut(s) 56, 1019
RsaNI GTAC 2 cut(s) 55, 1018
RseI CAYNNNNRTG 2 cut(s) 180, 842
SacI GAGCTC 1 cut(s) 450
SacII CCGCGG 1 cut(s) 343
SaqAI TTAA 1 cut(s) 750
Sau3AI GATC 6 cut(s) 20, 111, 313, 520, 535, 1331
Sau96I GGNCC 3 cut(s) 79, 337, 1369
ScaI AGTACT 1 cut(s) 56
SchI GAGTC 4 cut(s) 41, 68, 434, 1228
ScrFI CCNGG 7 cut(s) 50, 203, 622, 710, 780, 795, 1351
SduI GDGCHC 2 cut(s) 450, 974
SexAI ACCWGGT 1 cut(s) 201
SfaNI GCATC 3 cut(s) 346, 976, 1365
SfcI CTRYAG 1 cut(s) 360
Sfr303I CCGCGG 1 cut(s) 343
SgrBI CCGCGG 1 cut(s) 343
SinI GGWCC 1 cut(s) 337
SmiMI CAYNNNNRTG 2 cut(s) 180, 842
SmlI CTYRAG 3 cut(s) 224, 640, 743
SmoI CTYRAG 3 cut(s) 224, 640, 743
SpeI ACTAGT 1 cut(s) 887
Sse9I AATT 8 cut(s) 121, 286, 408, 499, 505, 808, 882, 998
SsiI CCGC 6 cut(s) 82, 217, 261, 340, 342, 739
SspMI CTAG 2 cut(s) 888, 924
SstI GAGCTC 1 cut(s) 450
StyD4I CCNGG 7 cut(s) 48, 201, 620, 708, 778, 793, 1349
StyI CCWWGG 2 cut(s) 551, 990
TaaI ACNGT 3 cut(s) 402, 604, 1108
TaqI TCGA 3 cut(s) 19, 114, 963
TasI AATT 8 cut(s) 121, 286, 408, 499, 505, 808, 882, 998
TatI WGTACW 2 cut(s) 54, 1017
TauI GCSGC 3 cut(s) 264, 345, 741
TfiI GAWTC 3 cut(s) 245, 373, 526
Tru1I TTAA 1 cut(s) 750
Tru9I TTAA 1 cut(s) 750
TscAI CASTG 3 cut(s) 609, 663, 694
TseFI GTSAC 1 cut(s) 689
Tsp45I GTSAC 1 cut(s) 689
TspDTI ATGAA 3 cut(s) 821, 945, 1331
TspGWI ACGGA 1 cut(s) 83
TspRI CASTG 3 cut(s) 609, 663, 694
VneI GTGCAC 1 cut(s) 970
VpaK11BI GGWCC 1 cut(s) 337
XapI RAATTY 2 cut(s) 121, 808
XbaI TCTAGA 1 cut(s) 923
XceI RCATGY 1 cut(s) 1163
XcmI CCANNNNNNNNNTGG 2 cut(s) 820, 1347
XspI CTAG 2 cut(s) 888, 924
ZrmI AGTACT 1 cut(s) 56
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.