Prupe.1G353100_v2.0.a1

Alpha/beta hydrolase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0015325
Physical Location & Seq
Reverse (-)
32843164 .. 32845553
2390 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G353100.1

Sequence Viewer

Length: 1233 bp
ATGGATCTGACGGGAAGGGCTGCCCATCCACTTTCGCTTGGGCTGCCGCCTGTCCATTTGCAATTCTTGGAGGAGCAATCGCGGCCAAGCAAGCACAAAGGGGTAGGGATAAGGAGCTTGCTTCGATATGGTGGAGGAAAGCGTCTTAATAATCGAACTATTCTTCCTTTCTTCAAGAATAGTGTCATCCCAACAACTTGTTGTGCAGCAAAGGCAACTACATCTACAGGTGCTGCTGCTGGCGATATGTTGGAAGTGGATTTGAGAGAGATTAAGGACAAATGCAAAAAGTGGAATTGGAAGGGTAGATACGCCATCAATTACTTTGTTTCTCACTCTTCTTCTGATCCACACTCATCAAATCCAAATCGTCCCCCTATACTTCTTGTTCATGGTTTCGGTGCCTCCATTCCTCACTGGCGCAGAAATATTAGGACGTTGGCTCAGATTTATACCGTTTATGCTATTGACCTCATCGGGTTTGGTGCCTCAGAGAAGCCAGTAGGCTTTTCATATACCATGGAAAAATGGGCTGAGTTAATCTTGGATTTTTTGGATGAAATTGTTCAAGAGCCGACTGTGTTGATAGGGAACTCTGTTGGGAGCCTTGCTTGTGTCATTGCTGCTGCCTCAGCCTCAGGTGCTGAGGCAGAATCTAATAATAAAGCACGCGTTCGAGGGTTGGTGCTTTTAAATTGTGCGGGTGGTATGAACAATAAAGCAATTACTGATGACTGGAGGATCAAGCTTTTCTTACCTTTGCTTTGGTTGATTGATTTTCTGTTGAAGCAACGAGGAATTGCTTCCGCCATTTTTGAGCGTGTCAAACAGAGAGATAATATAAGGAATATCTTATTGTCTGTTTACGGGAATAAGGAATCTGTTGATGAAGAATTAGTAGAGATAATCATGGAACCCACCTGCGACCCCGGGGCGCTTGATGCTTTTGTTTCTATCGTGACTGGCCCCCCAGGACCAAGCCCGGTGCAGTTGATGCCAACAATAATTTCCTCCTCCCTACCACTTCTAGTTTTATGGGGGGATGAAGACCCCTTCACTCCACTTGATGGACCTATCGGCAAATACTTCACCTCCCTACCTTCTCAACTACCCTACGTCACCCTCTTTGTTTTACAAGGGGTTGGGCATTGTCCCCACGATGACAGGCCTGACTTAGTACACCAGAAACTTCTTCCCTGGTTGGATCACTTTTCTACTGTAACTCACACTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_1 Abhydrolase_6

Protein Analysis

411

Amino Acids

45.13

Weight (kDa)

7.18

Isoelectric Point (pI)

41.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015325)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G38520 AT5G38520
fragaria_vesca FvH4_2g37190
malus_domestica MD08G1001000.v1.1
prunus_persica Prupe.1G353100_v2.0.a1
pyrus_communis pycom08g00040
rosa_chinensis RchiOBHm_Chr6g0304501
rosa_laevigata RLG00000010971
rosa_multiflora Rmu_sc0023263.1_g000001 Rmu_ssc0000218.1_g000058
rosa_roxburghii Rroxscaffold_7G00163690
rosa_rugosa Rorug06G0332600
rosa_samantha Rh6AG445100 Rh6CG457900 Rh6DG444700
rosa_wichuraiana Rw6G038640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 929
Acc36I ACCTGC 1 cut(s) 929
AccB1I GGYRCC 2 cut(s) 401, 485
AccB7I CCANNNNNTGG 1 cut(s) 1067
AccII CGCG 2 cut(s) 82, 672
AciI CCGC 4 cut(s) 47, 82, 701, 807
AclWI GGATC 4 cut(s) 12, 341, 749, 1212
AcoI YGGCCR 1 cut(s) 83
AfaI GTAC 1 cut(s) 1179
AfiI CCNNNNNNNGG 1 cut(s) 1067
AflIII ACRYGT 1 cut(s) 670
AgsI TTSAA 3 cut(s) 175, 569, 787
AjnI CCWGG 2 cut(s) 970, 1196
AjuI GAANNNNNNNTTGG 2 cut(s) 991, 1023
AloI GAACNNNNNNTCC 2 cut(s) 148, 180
AluBI AGCT 2 cut(s) 117, 748
AluI AGCT 2 cut(s) 117, 748
AlwI GGATC 4 cut(s) 12, 341, 749, 1212
AlwNI CAGNNNCTG 2 cut(s) 233, 644
Ama87I CYCGRG 1 cut(s) 929
AoxI GGCC 3 cut(s) 83, 964, 1166
ApeKI GCWGC 7 cut(s) 20, 43, 206, 233, 236, 623, 626
Asp700I GAANNNNTTC 2 cut(s) 564, 802
AspLEI GCGC 2 cut(s) 423, 937
AspS9I GGNCC 3 cut(s) 965, 974, 1070
AsuC2I CCSGG 3 cut(s) 930, 931, 983
AsuHPI GGTGA 2 cut(s) 1081, 1111
AvaI CYCGRG 1 cut(s) 929
AvaII GGWCC 2 cut(s) 974, 1070
AxyI CCTNAGG 1 cut(s) 637
BanI GGYRCC 2 cut(s) 401, 485
BarI GAAGNNNNNNTAC 2 cut(s) 293, 325
BbsI GAAGAC 1 cut(s) 1053
BbvCI CCTCAGC 2 cut(s) 631, 645
BbvI GCAGC 7 cut(s) 7, 30, 218, 220, 223, 610, 613
BccI CCATC 3 cut(s) 33, 323, 1061
BciT130I CCWGG 2 cut(s) 972, 1198
BcnI CCSGG 3 cut(s) 930, 931, 983
BfaI CTAG 1 cut(s) 1028
BfmI CTRYAG 1 cut(s) 225
BfoI RGCGCY 1 cut(s) 938
BfuAI ACCTGC 1 cut(s) 929
BisI GCNGC 9 cut(s) 21, 44, 47, 83, 207, 234, 237, 624, 627
BlsI GCNGC 9 cut(s) 22, 45, 48, 84, 208, 235, 238, 625, 628
Bme1390I CCNGG 5 cut(s) 930, 931, 972, 983, 1198
Bme18I GGWCC 2 cut(s) 974, 1070
BmeT110I CYCGRG 1 cut(s) 929
BmgT120I GGNCC 3 cut(s) 965, 974, 1070
BmiI GGNNCC 5 cut(s) 403, 487, 605, 915, 967
BmrFI CCNGG 5 cut(s) 930, 931, 972, 983, 1198
BmsI GCATC 2 cut(s) 931, 984
BpiI GAAGAC 1 cut(s) 1053
BpmI CTGGAG 1 cut(s) 757
Bpu10I CCTNAGC 2 cut(s) 631, 645
BpuMI CCSGG 3 cut(s) 930, 931, 983
BsaJI CCNNGG 6 cut(s) 519, 928, 929, 930, 970, 1196
BsaXI ACNNNNNCTCC 2 cut(s) 1076, 1106
Bsc4I CCNNNNNNNGG 1 cut(s) 1067
Bse1I ACTGG 4 cut(s) 422, 500, 740, 967
Bse21I CCTNAGG 1 cut(s) 637
Bse3DI GCAATG 1 cut(s) 618
BseBI CCWGG 2 cut(s) 972, 1198
BseDI CCNNGG 6 cut(s) 519, 928, 929, 930, 970, 1196
BseGI GGATG 4 cut(s) 25, 186, 562, 1048
BseLI CCNNNNNNNGG 1 cut(s) 1067
BseMI GCAATG 1 cut(s) 618
BseMII CTCAG 6 cut(s) 458, 504, 525, 636, 645, 651
BseNI ACTGG 4 cut(s) 422, 500, 740, 967
BseRI GAGGAG 2 cut(s) 86, 1003
BseXI GCAGC 7 cut(s) 7, 30, 218, 220, 223, 610, 613
BsgI GTGCAG 2 cut(s) 225, 1007
Bsh1236I CGCG 2 cut(s) 82, 672
BshFI GGCC 3 cut(s) 85, 966, 1168
BshNI GGYRCC 2 cut(s) 401, 485
BsiHKCI CYCGRG 1 cut(s) 929
BsiSI CCGG 2 cut(s) 930, 983
BslFI GGGAC 2 cut(s) 357, 1137
BslI CCNNNNNNNGG 1 cut(s) 1067
BsmFI GGGAC 2 cut(s) 357, 1137
BsnI GGCC 3 cut(s) 85, 966, 1168
BsoBI CYCGRG 1 cut(s) 929
Bsp143I GATC 4 cut(s) 4, 346, 741, 1204
Bsp19I CCATGG 1 cut(s) 519
BspACI CCGC 4 cut(s) 47, 82, 701, 807
BspANI GGCC 3 cut(s) 85, 966, 1168
BspCNI CTCAG 6 cut(s) 457, 503, 526, 637, 644, 650
BspFNI CGCG 2 cut(s) 82, 672
BspLI GGNNCC 5 cut(s) 403, 487, 605, 915, 967
BspMI ACCTGC 1 cut(s) 929
BspPI GGATC 4 cut(s) 12, 341, 749, 1212
BspT107I GGYRCC 2 cut(s) 401, 485
BsrDI GCAATG 1 cut(s) 618
BsrI ACTGG 4 cut(s) 422, 500, 740, 967
BssECI CCNNGG 6 cut(s) 519, 928, 929, 930, 970, 1196
BssMI GATC 4 cut(s) 4, 346, 741, 1204
BssT1I CCWWGG 1 cut(s) 519
Bst2UI CCWGG 2 cut(s) 972, 1198
Bst4CI ACNGT 3 cut(s) 457, 580, 1219
Bst6I CTCTTC 1 cut(s) 343
BstAPI GCANNNNNTGC 1 cut(s) 994
BstC8I GCNNGC 4 cut(s) 92, 119, 241, 670
BstDEI CTNAG 7 cut(s) 444, 490, 534, 631, 637, 645, 1174
BstDSI CCRYGG 1 cut(s) 519
BstF5I GGATG 4 cut(s) 25, 186, 562, 1048
BstFNI CGCG 2 cut(s) 82, 672
BstH2I RGCGCY 1 cut(s) 938
BstHHI GCGC 2 cut(s) 423, 937
BstKTI GATC 4 cut(s) 7, 349, 744, 1207
BstMBI GATC 4 cut(s) 4, 346, 741, 1204
BstMWI GCNNNNNNNGC 8 cut(s) 43, 82, 91, 212, 632, 641, 941, 994
BstNI CCWGG 2 cut(s) 972, 1198
BstSCI CCNGG 5 cut(s) 928, 929, 970, 981, 1196
BstSFI CTRYAG 1 cut(s) 225
BstUI CGCG 2 cut(s) 82, 672
BstV1I GCAGC 7 cut(s) 7, 30, 218, 220, 223, 610, 613
BstV2I GAAGAC 1 cut(s) 1053
BstX2I RGATCY 1 cut(s) 4
BstYI RGATCY 1 cut(s) 4
Bsu36I CCTNAGG 1 cut(s) 637
BsuRI GGCC 3 cut(s) 85, 966, 1168
BtgI CCRYGG 1 cut(s) 519
BtsCI GGATG 4 cut(s) 25, 186, 562, 1048
BtsIMutI CAGTG 1 cut(s) 415
BveI ACCTGC 1 cut(s) 929
Cac8I GCNNGC 4 cut(s) 92, 119, 241, 670
CaiI CAGNNNCTG 2 cut(s) 233, 644
CfoI GCGC 2 cut(s) 423, 937
Cfr13I GGNCC 3 cut(s) 965, 974, 1070
Cfr9I CCCGGG 1 cut(s) 929
CseI GACGC 1 cut(s) 131
Csp6I GTAC 1 cut(s) 1178
CviAII CATG 3 cut(s) 392, 520, 910
CviQI GTAC 1 cut(s) 1178
DdeI CTNAG 7 cut(s) 444, 490, 534, 631, 637, 645, 1174
DpnI GATC 4 cut(s) 6, 348, 743, 1206
DpnII GATC 4 cut(s) 4, 346, 741, 1204
DraI TTTAAA 1 cut(s) 693
EaeI YGGCCR 1 cut(s) 83
Eam1104I CTCTTC 1 cut(s) 343
EarI CTCTTC 1 cut(s) 343
EciI GGCGGA 1 cut(s) 796
Eco130I CCWWGG 1 cut(s) 519
Eco147I AGGCCT 1 cut(s) 1168
Eco47I GGWCC 2 cut(s) 974, 1070
Eco81I CCTNAGG 1 cut(s) 637
Eco88I CYCGRG 1 cut(s) 929
EcoRII CCWGG 2 cut(s) 970, 1196
EcoT14I CCWWGG 1 cut(s) 519
ErhI CCWWGG 1 cut(s) 519
FaeI CATG 3 cut(s) 395, 523, 913
FalI AAGNNNNNCTT 2 cut(s) 737, 769
FaqI GGGAC 2 cut(s) 357, 1137
FatI CATG 3 cut(s) 391, 519, 909
FauI CCCGC 1 cut(s) 694
Fnu4HI GCNGC 9 cut(s) 21, 44, 47, 83, 207, 234, 237, 624, 627
FokI GGATG 4 cut(s) 12, 173, 569, 1055
Fsp4HI GCNGC 9 cut(s) 21, 44, 47, 83, 207, 234, 237, 624, 627
FspBI CTAG 1 cut(s) 1028
GlaI GCGC 2 cut(s) 422, 936
GluI GCNGC 9 cut(s) 21, 44, 47, 83, 207, 234, 237, 624, 627
GsuI CTGGAG 1 cut(s) 757
HaeII RGCGCY 1 cut(s) 938
HaeIII GGCC 3 cut(s) 85, 966, 1168
HapII CCGG 2 cut(s) 930, 983
HgaI GACGC 1 cut(s) 131
HhaI GCGC 2 cut(s) 423, 937
Hin1II CATG 3 cut(s) 395, 523, 913
Hin6I GCGC 2 cut(s) 421, 935
HinP1I GCGC 2 cut(s) 421, 935
HindIII AAGCTT 1 cut(s) 746
HinfI GANTC 2 cut(s) 653, 878
HpaII CCGG 2 cut(s) 930, 983
HphI GGTGA 2 cut(s) 1081, 1111
Hpy166II GTNNAC 2 cut(s) 865, 1180
Hpy188I TCNGA 4 cut(s) 9, 346, 447, 493
Hpy188III TCNNGA 3 cut(s) 175, 569, 958
Hpy8I GTNNAC 2 cut(s) 865, 1180
HpyAV CCTTC 4 cut(s) 9, 295, 1063, 1110
HpyCH4III ACNGT 3 cut(s) 457, 580, 1219
HpyCH4IV ACGT 2 cut(s) 437, 1116
HpyCH4V TGCA 4 cut(s) 61, 206, 285, 988
HpyF10VI GCNNNNNNNGC 8 cut(s) 43, 82, 91, 212, 632, 641, 941, 994
HpyF3I CTNAG 7 cut(s) 444, 490, 534, 631, 637, 645, 1174
HpySE526I ACGT 2 cut(s) 437, 1116
Hsp92II CATG 3 cut(s) 395, 523, 913
HspAI GCGC 2 cut(s) 421, 935
Kzo9I GATC 4 cut(s) 4, 346, 741, 1204
LmnI GCTCC 3 cut(s) 73, 114, 603
Lsp1109I GCAGC 7 cut(s) 7, 30, 218, 220, 223, 610, 613
LweI GCATC 2 cut(s) 931, 984
MaeI CTAG 1 cut(s) 1028
MaeII ACGT 2 cut(s) 437, 1116
MaeIII GTNAC 3 cut(s) 958, 1117, 1219
MalI GATC 4 cut(s) 6, 348, 743, 1206
MboI GATC 4 cut(s) 4, 346, 741, 1204
MboII GAAGA 7 cut(s) 155, 163, 330, 333, 902, 1058, 1184
MflI RGATCY 1 cut(s) 4
MluCI AATT 9 cut(s) 62, 295, 319, 561, 694, 723, 798, 893, 1005
MluI ACGCGT 1 cut(s) 670
MmeI TCCRAC 2 cut(s) 231, 1182
MroXI GAANNNNTTC 2 cut(s) 564, 802
MseI TTAA 5 cut(s) 147, 273, 539, 692, 1231
MspI CCGG 2 cut(s) 930, 983
MspR9I CCNGG 5 cut(s) 930, 931, 972, 983, 1198
MvaI CCWGG 2 cut(s) 972, 1198
MvnI CGCG 2 cut(s) 82, 672
MwoI GCNNNNNNNGC 8 cut(s) 43, 82, 91, 212, 632, 641, 941, 994
NciI CCSGG 3 cut(s) 930, 931, 983
NcoI CCATGG 1 cut(s) 519
NdeII GATC 4 cut(s) 4, 346, 741, 1204
NlaIII CATG 3 cut(s) 395, 523, 913
NlaIV GGNNCC 5 cut(s) 403, 487, 605, 915, 967
NmuCI GTSAC 2 cut(s) 958, 1117
PaqCI CACCTGC 1 cut(s) 929
PceI AGGCCT 1 cut(s) 1168
PdmI GAANNNNTTC 2 cut(s) 564, 802
PfeI GAWTC 2 cut(s) 653, 878
PflMI CCANNNNNTGG 1 cut(s) 1067
PkrI GCNGC 9 cut(s) 22, 45, 48, 84, 208, 235, 238, 625, 628
Psp6I CCWGG 2 cut(s) 970, 1196
PspGI CCWGG 2 cut(s) 970, 1196
PspN4I GGNNCC 5 cut(s) 403, 487, 605, 915, 967
PspPI GGNCC 3 cut(s) 965, 974, 1070
PstNI CAGNNNCTG 2 cut(s) 233, 644
PsuI RGATCY 1 cut(s) 4
RsaI GTAC 1 cut(s) 1179
RsaNI GTAC 1 cut(s) 1178
SaqAI TTAA 5 cut(s) 147, 273, 539, 692, 1231
SatI GCNGC 9 cut(s) 21, 44, 47, 83, 207, 234, 237, 624, 627
Sau3AI GATC 4 cut(s) 4, 346, 741, 1204
Sau96I GGNCC 3 cut(s) 965, 974, 1070
ScrFI CCNGG 5 cut(s) 930, 931, 972, 983, 1198
SfaNI GCATC 2 cut(s) 931, 984
SfcI CTRYAG 1 cut(s) 225
SinI GGWCC 2 cut(s) 974, 1070
SmaI CCCGGG 1 cut(s) 931
Sse9I AATT 9 cut(s) 62, 295, 319, 561, 694, 723, 798, 893, 1005
SseBI AGGCCT 1 cut(s) 1168
SsiI CCGC 4 cut(s) 47, 82, 701, 807
SspI AATATT 1 cut(s) 430
SspMI CTAG 1 cut(s) 1028
StuI AGGCCT 1 cut(s) 1168
StyD4I CCNGG 5 cut(s) 928, 929, 970, 981, 1196
StyI CCWWGG 1 cut(s) 519
TaaI ACNGT 3 cut(s) 457, 580, 1219
TaiI ACGT 2 cut(s) 440, 1119
TaqI TCGA 3 cut(s) 124, 154, 676
TasI AATT 9 cut(s) 62, 295, 319, 561, 694, 723, 798, 893, 1005
TatI WGTACW 1 cut(s) 1177
TauI GCSGC 2 cut(s) 49, 85
TfiI GAWTC 2 cut(s) 653, 878
Tru1I TTAA 5 cut(s) 147, 273, 539, 692, 1231
Tru9I TTAA 5 cut(s) 147, 273, 539, 692, 1231
TscAI CASTG 1 cut(s) 422
TseFI GTSAC 2 cut(s) 958, 1117
TseI GCWGC 7 cut(s) 20, 43, 206, 233, 236, 623, 626
Tsp45I GTSAC 2 cut(s) 958, 1117
TspDTI ATGAA 6 cut(s) 380, 501, 573, 725, 903, 1059
TspMI CCCGGG 1 cut(s) 929
TspRI CASTG 1 cut(s) 422
Van91I CCANNNNNTGG 1 cut(s) 1067
VpaK11BI GGWCC 2 cut(s) 974, 1070
XmaI CCCGGG 1 cut(s) 929
XmnI GAANNNNTTC 2 cut(s) 564, 802
XspI CTAG 1 cut(s) 1028
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.