Rorug06G0332600

Splicing factor, suppressor of white-apricot homolog

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Forward (+)
48536537 .. 48541672
5136 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0332600.1

Sequence Viewer

Length: 2292 bp
ATGGCGGATCTTCTAGAAATCTTGACGTCAGCAGGTATTAACCTGGCGACAGCATTGGGGTTCCTTGTGGCGTTTGCTTTGCTGCGGCTTCAGCCCATCAACGACAGAGTCTACTTCCCGAAATGGTACCGAAAAGGGATCAGAGGGAGCCCGACGAGCTCCGGGACCTTTGCCAAGAGGTTTGTCAACTTGGATGCCATGACCTACATCAAGTTTCTGAATTGGATGCCTGCAGCACTGAGGATGCCGGAGCCTGAGCTCATTGATCACGCCGGGCTAGACTCTGCTGCCTACATTCGGATTTATGTACTTGGCTTGAAGATATTCTTCCCCATAACTGTTCTTTCACTTGCGGTTTTGATTCCTCTCAATTACACGAACGACACGCTGGAAAAATTCAAGGAAGTAGAATACAGCGACATTGATAAAATCTCGATATCCAATGTCCCTAATGCATCTCTTAAGTTCATTGGACATCTCATATTGTCTTATGTCTTCTCAATTTGGACGTGCTTTGTTTTATACCACGAGTACAAGACAGTGGCTACTAAAAGGCTTCAATTTTTAGCATCTCAAAAACGCCGTCCAGATCAATTTTCGGTTCTTGTGAGGAATGTACCGCCAGATCCTGATGAATCAGTCAGTGAGCATATCGAACACTTCTTTTGCGTAAACCATCCCAATGACTATCTTACACATCAAGTTGTATATAATACAAATAAACTTGCAAAGTTGGTTGCACGGAAGAAGAGTTTGAAAAATAGGTTTGTGTACTACCAAAATAAGTATGAGAGAAATCCAGATAAATCAAGGCCTACTACAAAGACAGGTTTCTTGGGCCTGTTGGGAGACAAAGTGGACGCAATTGATTACTACACAACTGAGATTGAAAAGTTGAGCGAAGAAGAGAAAAAAGAAAGAGAAAGAGTTGCGAGTGATCCTGAAGCCATAATGCCAGCAGCATTTGTTTCATTCAAATCGCGATGGGGAGCAGCTGTATGTGCTCAAACTCAGCAATCAAGTAATGCTACCATCTGGTTGACAGAATGGGCTCCTGAGCCACGTGACATCTATTGGAGAAATCTTTCAATTCCATACGTTGAGCTCAATGTGCGGAAACTGCTCATGGCTGTTGCTTTCTTTGTTCTCATTTCCTTTTTTATGATTCCAATAGCATTGGTCCAAACTCTAGCCAACATTGACAATCTTAAGAAGGCCCTTCCTTTCTTGGAGCCAATAATAGAGAAGCAGCAAGTTAAGTCTGTCATCCAAGGATTTCTTCCAGGAATTGCATTGAAGATATTCCTTGCTATACTTCCTATGATTCTAATGCTCATGTCAAAAATAGAGGGTTATACATCACTCTCATCTCTGGATAGGAGATCTGCTGCGAAGTATTATTTATTCATCCTTATCAACATGTTTCTGGGAAATATTGTTGCAGGAACAGCATTTGAGCAGCTTGAGGAATTTACTAGCCAGGCCTCATCAGAATATTTAAAAACTATTGGGAGGACCATGCCAATGAAAGGCACATTCTTCATCACTTATATAATGGTTGATGGTTGGAGTGGAATTGCTGCAGAAATCATCAGATTGGTTCCGCTAGCTCTATACCACTTCAAAAACACATTTTTGGTTAAGACAGAAGAAGATAGGGAGGAAGCAATGAATCCTGGTTCCTTGGCATTTGCTACAAATGAACCTAGAATACAGTTCTATATGTTGCTGGGGCTTGTATATTCTGTTGTCACTCCTTTACTTCTTCCATTTATTCTTATCTTCTTTGCTTTTGCCTACGTGGTTTTCCGTCACCAGATTATTAATGTCTATGATCAGAAATATGAGAGTGGTGCAGCCTTCTGGCCGCGTGTGCATATGCGTGTAATTATTGGCCTAATCGTATCCCAAGTCCTTGTAATTGGACTATTTAGCACATTAGATGTGCAGTATTCAACATATATTCTCATTCCACAACCTATTTTGACATTCTGGTTCTATAGAGTCTGCAAGGGTCGTTTCGAACCAGCATTCGTGACATTTCCTTTACAGGATGCAATGGTAAAGGATACAGTTGAACGAGCTACTGAACCAACCTTGAATTTGTTGGCCTATCTTAGGGATGCTTATGTACATCCTGACTTCAAGGGAGGGGAGATGTACAAACCCGAAGCCATTGACGAAGAAGAGAGAAATCCTCTTGTTCCTACAAAGAGAACATCTCAAATGGCATCTCAAACTGGTAGTAAACACGAGTCTGAAGGCTCTGAAGGACCTTTTTTGAAATCTTAG

Protein Analysis

763

Amino Acids

87.21

Weight (kDa)

8.58

Isoelectric Point (pI)

40.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RSN1_TM PF13967 7 - 177 4.5e-38 Late exocytosis, associated with Golgi transport
PHM7_cyt PF14703 198 - 361 7.8e-49 Cytosolic domain of 10TM putative phosphate transporter
RSN1_7TM PF02714 372 - 644 1.1e-84 Calcium-dependent channel, 7TM region, putative phosphate
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 29
Acc36I ACCTGC 1 cut(s) 23
Acc65I GGTACC 1 cut(s) 126
AccB1I GGYRCC 1 cut(s) 126
AccI GTMKAC 1 cut(s) 111
AccII CGCG 2 cut(s) 982, 1870
AciI CCGC 7 cut(s) 5, 85, 353, 620, 1114, 1604, 1868
AclWI GGATC 4 cut(s) 15, 146, 620, 932
AcoI YGGCCR 1 cut(s) 1865
AcsI RAATTY 3 cut(s) 395, 1469, 2101
AcuI CTGAAG 4 cut(s) 74, 963, 2280, 2289
AcvI CACGTG 1 cut(s) 1064
AcyI GRCGYC 1 cut(s) 26
AfaI GTAC 7 cut(s) 128, 309, 533, 618, 773, 2133, 2162
AfiI CCNNNNNNNGG 3 cut(s) 297, 1529, 2118
AflII CTTAAG 2 cut(s) 461, 1208
AflIII ACRYGT 1 cut(s) 1419
AjiI CACGTC 1 cut(s) 510
AjnI CCWGG 4 cut(s) 42, 1282, 1479, 1675
AjuI GAANNNNNNNTTGG 2 cut(s) 1263, 1295
AluBI AGCT 7 cut(s) 159, 259, 995, 1105, 1462, 1610, 2084
AluI AGCT 7 cut(s) 159, 259, 995, 1105, 1462, 1610, 2084
Alw21I GWGCWC 4 cut(s) 161, 261, 1006, 1107
Alw26I GTCTC 1 cut(s) 843
AlwI GGATC 4 cut(s) 15, 146, 620, 932
AlwNI CAGNNNCTG 1 cut(s) 629
AoxI GGCC 7 cut(s) 812, 838, 1215, 1482, 1865, 1894, 2109
ApoI RAATTY 3 cut(s) 395, 1469, 2101
ArsI GACNNNNNNTTYG 2 cut(s) 568, 600
AseI ATTAAT 1 cut(s) 1824
Asp700I GAANNNNTTC 3 cut(s) 323, 1084, 1301
Asp718I GGTACC 1 cut(s) 126
AspS9I GGNCC 6 cut(s) 165, 838, 1180, 1216, 1515, 2273
AsuC2I CCSGG 2 cut(s) 163, 274
AsuHPI GGTGA 1 cut(s) 1805
AsuII TTCGAA 1 cut(s) 2022
AsuNHI GCTAGC 1 cut(s) 1606
AvaII GGWCC 4 cut(s) 165, 1180, 1515, 2273
BanI GGYRCC 1 cut(s) 126
BanII GRGCYC 5 cut(s) 152, 161, 261, 1054, 1107
BauI CACGAG 2 cut(s) 527, 2252
BbrPI CACGTG 1 cut(s) 1064
BbsI GAAGAC 1 cut(s) 487
Bbv12I GWGCWC 4 cut(s) 161, 261, 1006, 1107
BccI CCATC 5 cut(s) 104, 684, 978, 1040, 1556
BceAI ACGGC 1 cut(s) 567
BciT130I CCWGG 4 cut(s) 44, 1284, 1481, 1677
BciVI GTATCC 2 cut(s) 1915, 2062
BclI TGATCA 2 cut(s) 265, 1834
BcnI CCSGG 2 cut(s) 163, 274
BcoDI GTCTC 1 cut(s) 843
BfaI CTAG 6 cut(s) 14, 278, 1190, 1476, 1607, 1707
BfmI CTRYAG 3 cut(s) 231, 1581, 1999
BfrI CTTAAG 2 cut(s) 461, 1208
BfuAI ACCTGC 1 cut(s) 23
BfuI GTATCC 2 cut(s) 1915, 2062
BglII AGATCT 1 cut(s) 1382
Bme1390I CCNGG 6 cut(s) 44, 163, 274, 1284, 1481, 1677
Bme18I GGWCC 4 cut(s) 165, 1180, 1515, 2273
BmgBI CACGTC 1 cut(s) 510
BmgT120I GGNCC 6 cut(s) 165, 838, 1180, 1216, 1515, 2273
BmiI GGNNCC 9 cut(s) 62, 128, 149, 166, 252, 1053, 1233, 1602, 1681
BmrFI CCNGG 6 cut(s) 44, 163, 274, 1284, 1481, 1677
BmsI GCATC 8 cut(s) 184, 216, 234, 464, 578, 2044, 2113, 2240
BmtI GCTAGC 1 cut(s) 1610
BpiI GAAGAC 1 cut(s) 487
BplI GAGNNNNNCTC 4 cut(s) 2182, 2214, 2206, 2238
Bpu10I CCTNAGC 2 cut(s) 255, 1056
Bpu14I TTCGAA 1 cut(s) 2022
BpuEI CTTGAG 1 cut(s) 1484
BpuMI CCSGG 2 cut(s) 163, 274
BsaAI YACGTR 2 cut(s) 1064, 1801
BsaHI GRCGYC 1 cut(s) 26
BsaJI CCNNGG 2 cut(s) 1270, 1683
BsaXI ACNNNNNCTCC 4 cut(s) 840, 870, 981, 1011
Bsc4I CCNNNNNNNGG 3 cut(s) 297, 1529, 2118
Bse1I ACTGG 1 cut(s) 2245
Bse3DI GCAATG 2 cut(s) 1674, 2064
BseBI CCWGG 4 cut(s) 44, 1284, 1481, 1677
BseDI CCNNGG 2 cut(s) 1270, 1683
BseGI GGATG 9 cut(s) 199, 231, 249, 676, 1266, 1407, 2059, 2128, 2134
BseLI CCNNNNNNNGG 3 cut(s) 297, 1529, 2118
BseMI GCAATG 2 cut(s) 1674, 2064
BseMII CTCAG 5 cut(s) 230, 246, 873, 1025, 1047
BseNI ACTGG 1 cut(s) 2245
BseYI CCCAGC 1 cut(s) 1729
BsgI GTGCAG 2 cut(s) 1875, 1967
Bsh1236I CGCG 2 cut(s) 982, 1870
BshFI GGCC 7 cut(s) 814, 840, 1217, 1484, 1867, 1896, 2111
BshNI GGYRCC 1 cut(s) 126
BsiHKAI GWGCWC 4 cut(s) 161, 261, 1006, 1107
BsiSI CCGG 3 cut(s) 162, 248, 273
BslFI GGGAC 2 cut(s) 178, 431
BslI CCNNNNNNNGG 3 cut(s) 297, 1529, 2118
BsmAI GTCTC 1 cut(s) 843
BsmFI GGGAC 2 cut(s) 178, 431
BsmI GAATGC 1 cut(s) 2030
BsnI GGCC 7 cut(s) 814, 840, 1217, 1484, 1867, 1896, 2111
Bsp119I TTCGAA 1 cut(s) 2022
Bsp1286I GDGCHC 6 cut(s) 152, 161, 261, 1006, 1054, 1107
Bsp1407I TGTACA 2 cut(s) 2131, 2160
Bsp143I GATC 8 cut(s) 7, 138, 265, 589, 625, 937, 1382, 1834
Bsp68I TCGCGA 1 cut(s) 982
BspACI CCGC 7 cut(s) 5, 85, 353, 620, 1114, 1604, 1868
BspANI GGCC 7 cut(s) 814, 840, 1217, 1484, 1867, 1896, 2111
BspCNI CTCAG 5 cut(s) 231, 247, 874, 1024, 1048
BspFNI CGCG 2 cut(s) 982, 1870
BspLI GGNNCC 9 cut(s) 62, 128, 149, 166, 252, 1053, 1233, 1602, 1681
BspMAI CTGCAG 2 cut(s) 235, 1585
BspMI ACCTGC 1 cut(s) 23
BspOI GCTAGC 1 cut(s) 1610
BspPI GGATC 4 cut(s) 15, 146, 620, 932
BspT104I TTCGAA 1 cut(s) 2022
BspT107I GGYRCC 1 cut(s) 126
BspTI CTTAAG 2 cut(s) 461, 1208
BsrDI GCAATG 2 cut(s) 1674, 2064
BsrGI TGTACA 2 cut(s) 2131, 2160
BsrI ACTGG 1 cut(s) 2245
BssECI CCNNGG 2 cut(s) 1270, 1683
BssMI GATC 8 cut(s) 7, 138, 265, 589, 625, 937, 1382, 1834
BssNI GRCGYC 1 cut(s) 26
BssSI CACGAG 2 cut(s) 527, 2252
BssT1I CCWWGG 2 cut(s) 1270, 1683
Bst2BI CACGAG 2 cut(s) 527, 2252
Bst2UI CCWGG 4 cut(s) 44, 1284, 1481, 1677
Bst4CI ACNGT 4 cut(s) 340, 541, 1716, 2074
Bst6I CTCTTC 3 cut(s) 743, 900, 2181
BstACI GRCGYC 1 cut(s) 26
BstAFI CTTAAG 2 cut(s) 461, 1208
BstAUI TGTACA 2 cut(s) 2131, 2160
BstBAI YACGTR 2 cut(s) 1064, 1801
BstBI TTCGAA 1 cut(s) 2022
BstC8I GCNNGC 3 cut(s) 231, 957, 1608
BstDEI CTNAG 7 cut(s) 239, 255, 882, 1011, 1056, 2117, 2289
BstENI CCTNNNNNAGG 1 cut(s) 2116
BstF5I GGATG 9 cut(s) 199, 231, 249, 676, 1266, 1407, 2059, 2128, 2134
BstFNI CGCG 2 cut(s) 982, 1870
BstKTI GATC 8 cut(s) 10, 141, 268, 592, 628, 940, 1385, 1837
BstMAI GTCTC 1 cut(s) 843
BstMBI GATC 8 cut(s) 7, 138, 265, 589, 625, 937, 1382, 1834
BstMWI GCNNNNNNNGC 7 cut(s) 91, 156, 1001, 1111, 1120, 1448, 1873
BstNI CCWGG 4 cut(s) 44, 1284, 1481, 1677
BstNSI RCATGY 1 cut(s) 1423
BstSCI CCNGG 6 cut(s) 42, 161, 272, 1282, 1479, 1675
BstSFI CTRYAG 3 cut(s) 231, 1581, 1999
BstUI CGCG 2 cut(s) 982, 1870
BstV2I GAAGAC 1 cut(s) 487
BstX2I RGATCY 3 cut(s) 7, 625, 1382
BstYI RGATCY 3 cut(s) 7, 625, 1382
BsuI GTATCC 2 cut(s) 1915, 2062
BsuRI GGCC 7 cut(s) 814, 840, 1217, 1484, 1867, 1896, 2111
BtgZI GCGATG 1 cut(s) 997
BtrI CACGTC 1 cut(s) 510
BtsCI GGATG 9 cut(s) 199, 231, 249, 676, 1266, 1407, 2059, 2128, 2134
BtsIMutI CAGTG 3 cut(s) 236, 546, 649
BtuMI TCGCGA 1 cut(s) 982
BveI ACCTGC 1 cut(s) 23
Cac8I GCNNGC 3 cut(s) 231, 957, 1608
CaiI CAGNNNCTG 1 cut(s) 629
Cfr13I GGNCC 6 cut(s) 165, 838, 1180, 1216, 1515, 2273
CseI GACGC 1 cut(s) 869
Csp6I GTAC 7 cut(s) 127, 308, 532, 617, 772, 2132, 2161
CviAII CATG 5 cut(s) 199, 1126, 1336, 1420, 1519
CviQI GTAC 7 cut(s) 127, 308, 532, 617, 772, 2132, 2161
DdeI CTNAG 7 cut(s) 239, 255, 882, 1011, 1056, 2117, 2289
DpnI GATC 8 cut(s) 9, 140, 267, 591, 627, 939, 1384, 1836
DpnII GATC 8 cut(s) 7, 138, 265, 589, 625, 937, 1382, 1834
DraI TTTAAA 1 cut(s) 1500
EaeI YGGCCR 1 cut(s) 1865
Eam1104I CTCTTC 3 cut(s) 743, 900, 2181
EarI CTCTTC 3 cut(s) 743, 900, 2181
EciI GGCGGA 1 cut(s) 20
Ecl136II GAGCTC 3 cut(s) 159, 259, 1105
Eco130I CCWWGG 2 cut(s) 1270, 1683
Eco147I AGGCCT 2 cut(s) 814, 1484
Eco24I GRGCYC 5 cut(s) 152, 161, 261, 1054, 1107
Eco32I GATATC 1 cut(s) 438
Eco47I GGWCC 4 cut(s) 165, 1180, 1515, 2273
Eco53kI GAGCTC 3 cut(s) 159, 259, 1105
Eco57I CTGAAG 4 cut(s) 74, 963, 2280, 2289
Eco72I CACGTG 1 cut(s) 1064
EcoICRI GAGCTC 3 cut(s) 159, 259, 1105
EcoNI CCTNNNNNAGG 1 cut(s) 2116
EcoO109I RGGNCCY 3 cut(s) 165, 1216, 2273
EcoRII CCWGG 4 cut(s) 42, 1282, 1479, 1675
EcoRV GATATC 1 cut(s) 438
EcoT14I CCWWGG 2 cut(s) 1270, 1683
EcoT22I ATGCAT 1 cut(s) 457
EcoT38I GRGCYC 5 cut(s) 152, 161, 261, 1054, 1107
ErhI CCWWGG 2 cut(s) 1270, 1683
FaeI CATG 5 cut(s) 202, 1129, 1339, 1423, 1522
FalI AAGNNNNNCTT 4 cut(s) 311, 343, 1263, 1295
FaqI GGGAC 2 cut(s) 178, 431
FatI CATG 5 cut(s) 198, 1125, 1335, 1419, 1518
FauNDI CATATG 1 cut(s) 1878
FbaI TGATCA 2 cut(s) 265, 1834
FblI GTMKAC 1 cut(s) 111
FokI GGATG 9 cut(s) 206, 238, 256, 663, 1253, 1394, 2066, 2121, 2135
FriOI GRGCYC 5 cut(s) 152, 161, 261, 1054, 1107
FspBI CTAG 6 cut(s) 14, 278, 1190, 1476, 1607, 1707
GsaI CCCAGC 1 cut(s) 1733
HaeIII GGCC 7 cut(s) 814, 840, 1217, 1484, 1867, 1896, 2111
HapII CCGG 3 cut(s) 162, 248, 273
HgaI GACGC 1 cut(s) 869
Hin1I GRCGYC 1 cut(s) 26
Hin1II CATG 5 cut(s) 202, 1129, 1339, 1423, 1522
HincII GTYRAC 2 cut(s) 187, 1041
HindII GTYRAC 2 cut(s) 187, 1041
HinfI GANTC 9 cut(s) 108, 281, 361, 635, 1165, 1324, 1672, 2004, 2255
HpaII CCGG 3 cut(s) 162, 248, 273
HphI GGTGA 1 cut(s) 1805
Hpy166II GTNNAC 7 cut(s) 112, 187, 673, 772, 859, 1041, 2249
Hpy188I TCNGA 8 cut(s) 143, 219, 300, 1492, 1595, 1839, 2260, 2269
Hpy8I GTNNAC 7 cut(s) 112, 187, 673, 772, 859, 1041, 2249
Hpy99I CGWCG 1 cut(s) 157
HpyAV CCTTC 5 cut(s) 1207, 1229, 1870, 2255, 2264
HpyCH4III ACNGT 4 cut(s) 340, 541, 1716, 2074
HpyCH4IV ACGT 5 cut(s) 26, 509, 1063, 1098, 1800
HpyF10VI GCNNNNNNNGC 7 cut(s) 91, 156, 1001, 1111, 1120, 1448, 1873
HpyF3I CTNAG 7 cut(s) 239, 255, 882, 1011, 1056, 2117, 2289
HpySE526I ACGT 5 cut(s) 26, 509, 1063, 1098, 1800
Hsp92I GRCGYC 1 cut(s) 26
Hsp92II CATG 5 cut(s) 202, 1129, 1339, 1423, 1522
KpnI GGTACC 1 cut(s) 130
Ksp22I TGATCA 2 cut(s) 265, 1834
Kzo9I GATC 8 cut(s) 7, 138, 265, 589, 625, 937, 1382, 1834
LmnI GCTCC 6 cut(s) 147, 164, 250, 989, 1057, 1231
LweI GCATC 8 cut(s) 184, 216, 234, 464, 578, 2044, 2113, 2240
MaeI CTAG 6 cut(s) 14, 278, 1190, 1476, 1607, 1707
MaeII ACGT 5 cut(s) 26, 509, 1063, 1098, 1800
MaeIII GTNAC 4 cut(s) 1064, 1750, 1811, 2035
MalI GATC 8 cut(s) 9, 140, 267, 591, 627, 939, 1384, 1836
MboI GATC 8 cut(s) 7, 138, 265, 589, 625, 937, 1382, 1834
MfeI CAATTG 1 cut(s) 864
MflI RGATCY 3 cut(s) 7, 625, 1382
MhlI GDGCHC 6 cut(s) 152, 161, 261, 1006, 1054, 1107
MlyI GAGTC 4 cut(s) 117, 275, 2013, 2264
MmeI TCCRAC 1 cut(s) 1547
Mph1103I ATGCAT 1 cut(s) 457
MroXI GAANNNNTTC 3 cut(s) 323, 1084, 1301
MseI TTAA 7 cut(s) 39, 462, 1209, 1257, 1499, 1641, 1824
MslI CAYNNNNRTG 3 cut(s) 681, 1523, 1881
MspA1I CMGCKG 1 cut(s) 995
MspCI CTTAAG 2 cut(s) 461, 1208
MspI CCGG 3 cut(s) 162, 248, 273
MspR9I CCNGG 6 cut(s) 44, 163, 274, 1284, 1481, 1677
MunI CAATTG 1 cut(s) 864
Mva1269I GAATGC 1 cut(s) 2030
MvaI CCWGG 4 cut(s) 44, 1284, 1481, 1677
MvnI CGCG 2 cut(s) 982, 1870
MwoI GCNNNNNNNGC 7 cut(s) 91, 156, 1001, 1111, 1120, 1448, 1873
NciI CCSGG 2 cut(s) 163, 274
NdeI CATATG 1 cut(s) 1878
NdeII GATC 8 cut(s) 7, 138, 265, 589, 625, 937, 1382, 1834
NheI GCTAGC 1 cut(s) 1606
NlaIII CATG 5 cut(s) 202, 1129, 1339, 1423, 1522
NlaIV GGNNCC 9 cut(s) 62, 128, 149, 166, 252, 1053, 1233, 1602, 1681
NmuCI GTSAC 4 cut(s) 1064, 1750, 1811, 2035
NruI TCGCGA 1 cut(s) 982
NsiI ATGCAT 1 cut(s) 457
NspI RCATGY 1 cut(s) 1423
NspV TTCGAA 1 cut(s) 2022
PceI AGGCCT 2 cut(s) 814, 1484
PciI ACATGT 1 cut(s) 1419
PctI GAATGC 1 cut(s) 2030
PdmI GAANNNNTTC 3 cut(s) 323, 1084, 1301
PfeI GAWTC 5 cut(s) 361, 635, 1165, 1324, 1672
PflFI GACNNNGTC 1 cut(s) 107
PfoI TCCNGGA 2 cut(s) 161, 1282
PleI GAGTC 4 cut(s) 116, 275, 2012, 2263
PmaCI CACGTG 1 cut(s) 1064
PmlI CACGTG 1 cut(s) 1064
PpsI GAGTC 4 cut(s) 116, 275, 2012, 2263
Ppu21I YACGTR 2 cut(s) 1064, 1801
PpuMI RGGWCCY 2 cut(s) 165, 2273
PscI ACATGT 1 cut(s) 1419
PshBI ATTAAT 1 cut(s) 1824
Psp124BI GAGCTC 3 cut(s) 161, 261, 1107
Psp5II RGGWCCY 2 cut(s) 165, 2273
Psp6I CCWGG 4 cut(s) 42, 1282, 1479, 1675
PspCI CACGTG 1 cut(s) 1064
PspFI CCCAGC 1 cut(s) 1729
PspGI CCWGG 4 cut(s) 42, 1282, 1479, 1675
PspN4I GGNNCC 9 cut(s) 62, 128, 149, 166, 252, 1053, 1233, 1602, 1681
PspPI GGNCC 6 cut(s) 165, 838, 1180, 1216, 1515, 2273
PspPPI RGGWCCY 2 cut(s) 165, 2273
PsrI GAACNNNNNNTAC 2 cut(s) 1695, 1727
PstI CTGCAG 2 cut(s) 235, 1585
PstNI CAGNNNCTG 1 cut(s) 629
PsuI RGATCY 3 cut(s) 7, 625, 1382
PsyI GACNNNGTC 1 cut(s) 107
PvuII CAGCTG 1 cut(s) 995
RruI TCGCGA 1 cut(s) 982
RsaI GTAC 7 cut(s) 128, 309, 533, 618, 773, 2133, 2162
RsaNI GTAC 7 cut(s) 127, 308, 532, 617, 772, 2132, 2161
RseI CAYNNNNRTG 3 cut(s) 681, 1523, 1881
SacI GAGCTC 3 cut(s) 161, 261, 1107
SaqAI TTAA 7 cut(s) 39, 462, 1209, 1257, 1499, 1641, 1824
Sau3AI GATC 8 cut(s) 7, 138, 265, 589, 625, 937, 1382, 1834
Sau96I GGNCC 6 cut(s) 165, 838, 1180, 1216, 1515, 2273
SchI GAGTC 4 cut(s) 117, 275, 2013, 2264
ScrFI CCNGG 6 cut(s) 44, 163, 274, 1284, 1481, 1677
SduI GDGCHC 6 cut(s) 152, 161, 261, 1006, 1054, 1107
SfaNI GCATC 8 cut(s) 184, 216, 234, 464, 578, 2044, 2113, 2240
SfcI CTRYAG 3 cut(s) 231, 1581, 1999
SfuI TTCGAA 1 cut(s) 2022
SinI GGWCC 4 cut(s) 165, 1180, 1515, 2273
SmiMI CAYNNNNRTG 3 cut(s) 681, 1523, 1881
SmlI CTYRAG 3 cut(s) 461, 1208, 1463
SmoI CTYRAG 3 cut(s) 461, 1208, 1463
SseBI AGGCCT 2 cut(s) 814, 1484
SsiI CCGC 7 cut(s) 5, 85, 353, 620, 1114, 1604, 1868
SspI AATATT 2 cut(s) 1435, 1496
SspMI CTAG 6 cut(s) 14, 278, 1190, 1476, 1607, 1707
SstI GAGCTC 3 cut(s) 161, 261, 1107
StuI AGGCCT 2 cut(s) 814, 1484
StyD4I CCNGG 6 cut(s) 42, 161, 272, 1282, 1479, 1675
StyI CCWWGG 2 cut(s) 1270, 1683
TaaI ACNGT 4 cut(s) 340, 541, 1716, 2074
TaiI ACGT 5 cut(s) 29, 512, 1066, 1101, 1803
TaqI TCGA 3 cut(s) 434, 654, 2022
TatI WGTACW 5 cut(s) 307, 531, 771, 2131, 2160
TauI GCSGC 2 cut(s) 88, 1870
TfiI GAWTC 5 cut(s) 361, 635, 1165, 1324, 1672
Tru1I TTAA 7 cut(s) 39, 462, 1209, 1257, 1499, 1641, 1824
Tru9I TTAA 7 cut(s) 39, 462, 1209, 1257, 1499, 1641, 1824
TscAI CASTG 3 cut(s) 243, 546, 649
TseFI GTSAC 4 cut(s) 1064, 1750, 1811, 2035
Tsp45I GTSAC 4 cut(s) 1064, 1750, 1811, 2035
TspDTI ATGAA 8 cut(s) 457, 648, 960, 1396, 1531, 1541, 1685, 1716
TspGWI ACGGA 2 cut(s) 757, 1799
TspRI CASTG 3 cut(s) 243, 546, 649
Tth111I GACNNNGTC 1 cut(s) 107
Vha464I CTTAAG 2 cut(s) 461, 1208
VpaK11BI GGWCC 4 cut(s) 165, 1180, 1515, 2273
VspI ATTAAT 1 cut(s) 1824
XagI CCTNNNNNAGG 1 cut(s) 2116
XapI RAATTY 3 cut(s) 395, 1469, 2101
XbaI TCTAGA 1 cut(s) 13
XceI RCATGY 1 cut(s) 1423
XmiI GTMKAC 1 cut(s) 111
XmnI GAANNNNTTC 3 cut(s) 323, 1084, 1301
XspI CTAG 6 cut(s) 14, 278, 1190, 1476, 1607, 1707
ZraI GACGTC 1 cut(s) 27
Zsp2I ATGCAT 1 cut(s) 457
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.