Rroxscaffold_4G00309260

Glutamate receptor

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
Physical Location & Seq
Forward (+)
30992682 .. 30994157
1476 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00309260.1

Sequence Viewer

Length: 1332 bp
ATGTTGCTGAAGAACCCTTCTCATCAACTTAAGGTTGCTCTGTCAATCTTTTTCTTTCTTTCTTCTTCACTTTATTTGGCCACTCCAGAAAACAAAACCATTATTCGAGTTAATGTGGGGATTATTCTTGACGACTATAAACATTCACTGACTGGAAAGATTTGGTTGAGTTCCATAAAAATGGCCCTCACCGACTTCTATGCTTCTCATGCTCTTCACAACACTAAACTGCTCTTGAACATCAGGAACTCAAAAGGCAATGTTGTTCGTGCAGCTAAAGCAGGCACAGCTCAACATCTCATGAAACATGAACAAGTGCAAGCGATTATCGGACCAGTCACGTCAATGGAGACAAACTTCGTTATTAACCTCGGGGGTCAAACCCATGTGCCCATATTATCATTTTCTGCAACAAGCCCTTCTCTTACTTCACTTCGGAGTTCCTACTTTTTCCAATTTGCGCAAAATGACACATCTCAAGTAGAAGCTATTAGTGCTGTTGTTAAGGCTTTTGGATGGAGAGAAGTTGTGCCCATCTACTTAGACACTTCATACGGCGAGGGAATCATCCCGGCTTTAACTAATGCCTTACAAGAGGTAGGTGCCTTTATCCCCTATAGGAGTGCCATTTCTCCATTCGCATCCGATGATCAAATTAAGGAAGAGCTTTACAAATTGACAACAATGCAAACTAGAGTGTTCATTGTCCACATGACCACCAATGATTTAATATGCTCTAAACTGTTTACCAAGGCAAACGAGATTGGAATGATGAAGGAAGGATATGTTTGGTTAACAGCTAACGGGATAGCTAATAGTTTACAGTTGTTAAATTCTTCAGTCATCCATTCCATGCATGGAGTGTTAGGTGTGGAAACTCATGTCCAACAAACCCCAGAGCTTGAAGGCTTGAAGATAAGGTGGAAAAAACAGTTCCAAAAAGACAATCCAACGATCATCTTTGGTGTTGAATTGGATGTTTTTGGTCTGTGGGCTTATGATGCTGCTTTTGCACTGGCTATGGCAATTGAGAAAGTGTATGGACTAACTGCTTCCCACAACAACACAGATTATAAAAGTTTTCATGTCTCTCAATATGGTCCAAAACTTCGCAAAGCCCTGTCAACTACAAGATTTCAAGGCATGGCTGGAGATTTCAGGCTTGTTGATGGACAGCTTCAATCATCAAAGTTTCAAATAATTAATGTAAATGGTGGAGGATCAAGAACAATAGGATTTTGGTCACCGGAATATGGATTATGGAACCGAGTGTACCCAGCAAATTCTAAGCCAAATCTAGGACCTGTTATATGGCCAGGAGATCACTACTAG

Protein Analysis

443

Amino Acids

49.26

Weight (kDa)

9.17

Isoelectric Point (pI)

33.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peripla_BP_6 PF13458 50 - 404 3.5e-17 Periplasmic binding protein
ANF_receptor PF01094 55 - 405 3.2e-74 Receptor family ligand binding region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1074
Acc16I TGCGCA 1 cut(s) 462
AccB1I GGYRCC 1 cut(s) 602
AclWI GGATC 1 cut(s) 1228
AcoI YGGCCR 2 cut(s) 78, 1313
AcsI RAATTY 2 cut(s) 832, 1282
AcuI CTGAAG 2 cut(s) 29, 822
AfaI GTAC 1 cut(s) 1274
AfiI CCNNNNNNNGG 2 cut(s) 1253, 1298
AflII CTTAAG 1 cut(s) 29
AgsI TTSAA 7 cut(s) 238, 905, 913, 971, 1139, 1181, 1196
AjiI CACGTC 1 cut(s) 342
AjnI CCWGG 1 cut(s) 1315
AluBI AGCT 8 cut(s) 275, 290, 488, 667, 800, 812, 901, 1177
AluI AGCT 8 cut(s) 275, 290, 488, 667, 800, 812, 901, 1177
Alw26I GTCTC 2 cut(s) 344, 1093
AlwI GGATC 1 cut(s) 1228
Ama87I CYCGRG 1 cut(s) 371
AoxI GGCC 3 cut(s) 78, 183, 1313
ApeKI GCWGC 2 cut(s) 272, 1004
ApoI RAATTY 2 cut(s) 832, 1282
AseI ATTAAT 1 cut(s) 1203
AspLEI GCGC 1 cut(s) 463
AspS9I GGNCC 4 cut(s) 184, 332, 1100, 1301
AsuC2I CCSGG 1 cut(s) 572
AsuHPI GGTGA 2 cut(s) 181, 1236
AvaI CYCGRG 1 cut(s) 371
AvaII GGWCC 3 cut(s) 332, 1100, 1301
BaeGI GKGCMC 2 cut(s) 393, 534
BalI TGGCCA 2 cut(s) 80, 1315
BanI GGYRCC 1 cut(s) 602
BbvI GCAGC 2 cut(s) 284, 991
BccI CCATC 3 cut(s) 510, 542, 1163
BceAI ACGGC 1 cut(s) 571
BcgI CGANNNNNNTGC 2 cut(s) 182, 216
BciT130I CCWGG 1 cut(s) 1317
BclI TGATCA 1 cut(s) 649
BcnI CCSGG 1 cut(s) 572
BcoDI GTCTC 2 cut(s) 344, 1093
BfaI CTAG 3 cut(s) 693, 1298, 1330
BfmI CTRYAG 1 cut(s) 616
BfrI CTTAAG 1 cut(s) 29
BisI GCNGC 2 cut(s) 273, 1005
BlsI GCNGC 2 cut(s) 274, 1006
Bme1390I CCNGG 2 cut(s) 572, 1317
Bme18I GGWCC 3 cut(s) 332, 1100, 1301
BmeT110I CYCGRG 1 cut(s) 371
BmgBI CACGTC 1 cut(s) 342
BmgT120I GGNCC 4 cut(s) 184, 332, 1100, 1301
BmiI GGNNCC 2 cut(s) 604, 1265
BmrFI CCNGG 2 cut(s) 572, 1317
BmsI GCATC 2 cut(s) 650, 991
BpmI CTGGAG 2 cut(s) 69, 1170
BpuEI CTTGAG 1 cut(s) 462
BpuMI CCSGG 1 cut(s) 572
BsaJI CCNNGG 2 cut(s) 370, 750
BsaWI WCCGGW 1 cut(s) 1246
Bsc4I CCNNNNNNNGG 2 cut(s) 1253, 1298
Bse1I ACTGG 3 cut(s) 157, 335, 1020
Bse3DI GCAATG 1 cut(s) 265
BseBI CCWGG 1 cut(s) 1317
BseDI CCNNGG 2 cut(s) 370, 750
BseGI GGATG 5 cut(s) 521, 567, 641, 843, 982
BseLI CCNNNNNNNGG 2 cut(s) 1253, 1298
BseMI GCAATG 1 cut(s) 265
BseNI ACTGG 3 cut(s) 157, 335, 1020
BseSI GKGCMC 2 cut(s) 393, 534
BseXI GCAGC 2 cut(s) 284, 991
BseYI CCCAGC 1 cut(s) 1276
BsgI GTGCAG 1 cut(s) 291
BshFI GGCC 3 cut(s) 80, 185, 1315
BshNI GGYRCC 1 cut(s) 602
BsiHKCI CYCGRG 1 cut(s) 371
BsiSI CCGG 2 cut(s) 572, 1247
BslI CCNNNNNNNGG 2 cut(s) 1253, 1298
BsmAI GTCTC 2 cut(s) 344, 1093
BsnI GGCC 3 cut(s) 80, 185, 1315
BsoBI CYCGRG 1 cut(s) 371
Bsp1286I GDGCHC 2 cut(s) 393, 534
Bsp143I GATC 4 cut(s) 649, 954, 1220, 1321
BspANI GGCC 3 cut(s) 80, 185, 1315
BspHI TCATGA 1 cut(s) 300
BspLI GGNNCC 2 cut(s) 604, 1265
BspPI GGATC 1 cut(s) 1228
BspQI GCTCTTC 2 cut(s) 219, 657
BspT107I GGYRCC 1 cut(s) 602
BspTI CTTAAG 1 cut(s) 29
BsrDI GCAATG 1 cut(s) 265
BsrI ACTGG 3 cut(s) 157, 335, 1020
BssECI CCNNGG 2 cut(s) 370, 750
BssMI GATC 4 cut(s) 649, 954, 1220, 1321
BssT1I CCWWGG 1 cut(s) 750
Bst2UI CCWGG 1 cut(s) 1317
Bst4CI ACNGT 3 cut(s) 744, 825, 933
Bst6I CTCTTC 2 cut(s) 219, 657
BstAFI CTTAAG 1 cut(s) 29
BstC8I GCNNGC 2 cut(s) 283, 321
BstDEI CTNAG 2 cut(s) 541, 1287
BstEII GGTNACC 1 cut(s) 1242
BstF5I GGATG 5 cut(s) 521, 567, 641, 843, 982
BstHHI GCGC 1 cut(s) 463
BstKTI GATC 4 cut(s) 652, 957, 1223, 1324
BstMAI GTCTC 2 cut(s) 344, 1093
BstMBI GATC 4 cut(s) 649, 954, 1220, 1321
BstMWI GCNNNNNNNGC 6 cut(s) 209, 278, 287, 494, 1001, 1010
BstNI CCWGG 1 cut(s) 1317
BstPI GGTNACC 1 cut(s) 1242
BstSCI CCNGG 2 cut(s) 570, 1315
BstSFI CTRYAG 1 cut(s) 616
BstSLI GKGCMC 2 cut(s) 393, 534
BstV1I GCAGC 2 cut(s) 284, 991
BstXI CCANNNNNNTGG 1 cut(s) 181
BsuRI GGCC 3 cut(s) 80, 185, 1315
BtrI CACGTC 1 cut(s) 342
BtsCI GGATG 5 cut(s) 521, 567, 641, 843, 982
BtsIMutI CAGTG 2 cut(s) 146, 1013
Cac8I GCNNGC 2 cut(s) 283, 321
CciI TCATGA 1 cut(s) 300
CfoI GCGC 1 cut(s) 463
Cfr13I GGNCC 4 cut(s) 184, 332, 1100, 1301
Csp6I GTAC 1 cut(s) 1273
CviQI GTAC 1 cut(s) 1273
DdeI CTNAG 2 cut(s) 541, 1287
DpnI GATC 4 cut(s) 651, 956, 1222, 1323
DpnII GATC 4 cut(s) 649, 954, 1220, 1321
EaeI YGGCCR 2 cut(s) 78, 1313
Eam1104I CTCTTC 2 cut(s) 219, 657
EarI CTCTTC 2 cut(s) 219, 657
Eco130I CCWWGG 1 cut(s) 750
Eco47I GGWCC 3 cut(s) 332, 1100, 1301
Eco57I CTGAAG 2 cut(s) 29, 822
Eco88I CYCGRG 1 cut(s) 371
Eco91I GGTNACC 1 cut(s) 1242
EcoO109I RGGNCCY 1 cut(s) 1301
EcoO65I GGTNACC 1 cut(s) 1242
EcoRII CCWGG 1 cut(s) 1315
EcoT14I CCWWGG 1 cut(s) 750
EcoT22I ATGCAT 1 cut(s) 858
ErhI CCWWGG 1 cut(s) 750
FbaI TGATCA 1 cut(s) 649
Fnu4HI GCNGC 2 cut(s) 273, 1005
FokI GGATG 5 cut(s) 528, 554, 628, 830, 989
Fsp4HI GCNGC 2 cut(s) 273, 1005
FspBI CTAG 3 cut(s) 693, 1298, 1330
FspI TGCGCA 1 cut(s) 462
GlaI GCGC 1 cut(s) 462
GluI GCNGC 2 cut(s) 273, 1005
GsaI CCCAGC 1 cut(s) 1280
GsuI CTGGAG 2 cut(s) 69, 1170
HaeIII GGCC 3 cut(s) 80, 185, 1315
HapII CCGG 2 cut(s) 572, 1247
HhaI GCGC 1 cut(s) 463
Hin6I GCGC 1 cut(s) 461
HinP1I GCGC 1 cut(s) 461
HincII GTYRAC 2 cut(s) 795, 1125
HindII GTYRAC 2 cut(s) 795, 1125
HinfI GANTC 1 cut(s) 564
HpaI GTTAAC 1 cut(s) 795
HpaII CCGG 2 cut(s) 572, 1247
HphI GGTGA 2 cut(s) 181, 1236
Hpy166II GTNNAC 6 cut(s) 709, 747, 795, 821, 1125, 1273
Hpy188I TCNGA 3 cut(s) 332, 438, 646
Hpy188III TCNNGA 6 cut(s) 86, 128, 235, 244, 301, 1224
Hpy8I GTNNAC 6 cut(s) 709, 747, 795, 821, 1125, 1273
HpyAV CCTTC 5 cut(s) 27, 429, 769, 773, 899
HpyCH4III ACNGT 3 cut(s) 744, 825, 933
HpyCH4IV ACGT 1 cut(s) 341
HpyCH4V TGCA 6 cut(s) 272, 319, 410, 688, 856, 1013
HpyF10VI GCNNNNNNNGC 6 cut(s) 209, 278, 287, 494, 1001, 1010
HpyF3I CTNAG 2 cut(s) 541, 1287
HpySE526I ACGT 1 cut(s) 341
HspAI GCGC 1 cut(s) 461
Ksp22I TGATCA 1 cut(s) 649
KspAI GTTAAC 1 cut(s) 795
Kzo9I GATC 4 cut(s) 649, 954, 1220, 1321
LguI GCTCTTC 2 cut(s) 219, 657
Lsp1109I GCAGC 2 cut(s) 284, 991
LweI GCATC 2 cut(s) 650, 991
MaeI CTAG 3 cut(s) 693, 1298, 1330
MaeII ACGT 1 cut(s) 341
MaeIII GTNAC 2 cut(s) 337, 1242
MalI GATC 4 cut(s) 651, 956, 1222, 1323
MboI GATC 4 cut(s) 649, 954, 1220, 1321
MboII GAAGA 7 cut(s) 22, 54, 57, 206, 674, 828, 925
MfeI CAATTG 1 cut(s) 1026
MhlI GDGCHC 2 cut(s) 393, 534
MlsI TGGCCA 2 cut(s) 80, 1315
MluCI AATT 8 cut(s) 455, 654, 674, 832, 971, 1026, 1200, 1282
MluNI TGGCCA 2 cut(s) 80, 1315
MmeI TCCRAC 2 cut(s) 910, 974
MnlI CCTC 5 cut(s) 197, 380, 553, 589, 1211
Mox20I TGGCCA 2 cut(s) 80, 1315
Mph1103I ATGCAT 1 cut(s) 858
MscI TGGCCA 2 cut(s) 80, 1315
MslI CAYNNNNRTG 2 cut(s) 179, 344
Msp20I TGGCCA 2 cut(s) 80, 1315
MspCI CTTAAG 1 cut(s) 29
MspI CCGG 2 cut(s) 572, 1247
MspR9I CCNGG 2 cut(s) 572, 1317
MunI CAATTG 1 cut(s) 1026
MvaI CCWGG 1 cut(s) 1317
MwoI GCNNNNNNNGC 6 cut(s) 209, 278, 287, 494, 1001, 1010
NciI CCSGG 1 cut(s) 572
NdeII GATC 4 cut(s) 649, 954, 1220, 1321
NlaIV GGNNCC 2 cut(s) 604, 1265
NmuCI GTSAC 2 cut(s) 337, 1242
NsbI TGCGCA 1 cut(s) 462
NsiI ATGCAT 1 cut(s) 858
PagI TCATGA 1 cut(s) 300
PciSI GCTCTTC 2 cut(s) 219, 657
PfeI GAWTC 1 cut(s) 564
PkrI GCNGC 2 cut(s) 274, 1006
PpuMI RGGWCCY 1 cut(s) 1301
PshBI ATTAAT 1 cut(s) 1203
PsiI TTATAA 1 cut(s) 1074
Psp5II RGGWCCY 1 cut(s) 1301
Psp6I CCWGG 1 cut(s) 1315
PspEI GGTNACC 1 cut(s) 1242
PspFI CCCAGC 1 cut(s) 1276
PspGI CCWGG 1 cut(s) 1315
PspN4I GGNNCC 2 cut(s) 604, 1265
PspPI GGNCC 4 cut(s) 184, 332, 1100, 1301
PspPPI RGGWCCY 1 cut(s) 1301
PsrI GAACNNNNNNTAC 2 cut(s) 1256, 1288
RsaI GTAC 1 cut(s) 1274
RsaNI GTAC 1 cut(s) 1273
RseI CAYNNNNRTG 2 cut(s) 179, 344
SapI GCTCTTC 2 cut(s) 219, 657
SatI GCNGC 2 cut(s) 273, 1005
Sau3AI GATC 4 cut(s) 649, 954, 1220, 1321
Sau96I GGNCC 4 cut(s) 184, 332, 1100, 1301
ScrFI CCNGG 2 cut(s) 572, 1317
SduI GDGCHC 2 cut(s) 393, 534
SfaNI GCATC 2 cut(s) 650, 991
SfcI CTRYAG 1 cut(s) 616
SinI GGWCC 3 cut(s) 332, 1100, 1301
SmiMI CAYNNNNRTG 2 cut(s) 179, 344
SmlI CTYRAG 2 cut(s) 29, 477
SmoI CTYRAG 2 cut(s) 29, 477
Sse9I AATT 8 cut(s) 455, 654, 674, 832, 971, 1026, 1200, 1282
SspMI CTAG 3 cut(s) 693, 1298, 1330
StyD4I CCNGG 2 cut(s) 570, 1315
StyI CCWWGG 1 cut(s) 750
TaaI ACNGT 3 cut(s) 744, 825, 933
TaiI ACGT 1 cut(s) 344
TaqI TCGA 1 cut(s) 106
TasI AATT 8 cut(s) 455, 654, 674, 832, 971, 1026, 1200, 1282
TfiI GAWTC 1 cut(s) 564
TscAI CASTG 2 cut(s) 153, 1020
TseFI GTSAC 2 cut(s) 337, 1242
TseI GCWGC 2 cut(s) 272, 1004
Tsp45I GTSAC 2 cut(s) 337, 1242
TspDTI ATGAA 6 cut(s) 317, 324, 540, 691, 788, 1073
TspRI CASTG 2 cut(s) 153, 1020
Vha464I CTTAAG 1 cut(s) 29
VpaK11BI GGWCC 3 cut(s) 332, 1100, 1301
VspI ATTAAT 1 cut(s) 1203
XapI RAATTY 2 cut(s) 832, 1282
XcmI CCANNNNNNNNNTGG 1 cut(s) 854
XspI CTAG 3 cut(s) 693, 1298, 1330
Zsp2I ATGCAT 1 cut(s) 858
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.