Rw5G025830

Glutamate receptor

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Reverse (-)
36985692 .. 36990619
4928 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G025830.1

Sequence Viewer

Length: 2835 bp
ATGAGCTCTATGGATCATAAGAAGAGAACTATCCTTCTTCTTTTCTCATGGATTTTCATGGTCGCCACCATGGCAGCTGCAAGCACAACGATAATCCCAGTGAACGTGGGAGTTGTTGTAGACCTTGATGAACCGAGTGGGAAAATGTACTTGAGTTGCATCGAAATGGCGCTTTCGGATTTCTATGCTATCCATGCTGACTACAAGACTAGGCTCGTTTTGAACACCAGGAACTCCAATGGAGATGTGGTTGGAGCAGGTGCCGCAGCTTTAGATCTGATAAAGAATGTAGAAGTGAAAGCCATCCTAGGACCGGTGTCGTCCATGCAGGCAAGTTTCGTTGTTAATCTTGGAGAGAAAGCTCGTGTACCCATCATATCATTTTCTGCAACAAGCCCTTCTCTTACTTCACCAAGGAACTCCTATTTTTTCCGATTTGCACAAAATGACTTGAACCAAGTGAAAGCTATAAGTGGTATTGTTCAGAACTTTGGATGGAGACGAGTTGTGCCCATCTACGTAGACAACATGTATGGGGAAGGAGTCATACCTTTTCTAATTGATGCCTTGCAAGACGTTGATGCTCACATCCCCTACAGAAGTCTAATTCACGAACTAGCCACAGATGATCAGATTGAAAAAGAGCTTTACAAGTTGATGACGATGCAGACTCGAGTCTTTATTGTGCATATGATGCCTAATCTTTCCTCTCGGTTATTTTCCAAGGCAAAAGAGATGGGAATGATGAGTGAGGGTTTTGTTTGGATCACAACTAATAGTATTGGAAATAATTTAAGGTCTATGGCTTCAGTCCTTGATTCGATGCAAGGCCTATTAGGTCTAGAAACTTACATTCCAAGGACATTGAAGCTTAGACAATTCATATCAAGGTGGAAAAAGCAATTCCAACAAGACAATCCAAAAATCATTGATGTTGAACTGGACGCTTTTGGATTGCAGGCATATGATGCTGCTTTTGCAGTAGCCATGGCCGTTGAGAAAGTTGCAAACGCAGGTTTTAAATTCCAAAAGAGGAATGCTTCTTCCTTCAACTCTCATTATGGCTCAAAACTTTCTCATGCATTATCCATCATTAATTTCAAAGGTATGGCTGGAGACTTCAATCTTGTTGATAGGCAACTTCAAGTCTCAACTTTTAAGATTGTTAATGTGAATGGTTATGGACCAAGAACAGTTGGATACTGGACACCAGAAAATGGAAAGGTAGTAAAGCGGTTGAACTCGACAAGGAATAGTACAATATCAACTTCCAAGTGCGATCTTAGACCTATTATATGGCCTGGAGAGTCATTATCAGTTCCTAAAGGATGGGAGATCCCGACAAATGGTACCAAGTTAAGAATAGGAGTTCCTATGAGGGAAGGTTTTCAAGAATTTGTTAAAGTAACTAATACAAGCACTAATACAGTTGACGTCACTGGATTCAGTATTGATGTGTTTAAAGCCGTATTGGAGATCCTACCATATGCACTTCCTTATGATTTTGTTCCCTTTGCAATTGCTGATGGAAGCACATACAATGATTTGGTGTATCAAGTACATGATGGGAAGTTTGATGCTGTGGTTGGAGATTTAACAATTAGAGCAAATAGGTCATTGTATGTGGGCTTTACTATGCCATATTCCGAATCTGGTGTAGTGATGGTTGTGCCAATACAAGACAAGAGGACCAAAAGTGCATGGGTTTTCTTAAAGCCTTTGACATGGGACCTTTGGATGACAACTTTGAGTTTTTTCATCTTTATTGGTTTTGTGATTTGGGTGCTTGAACATCGAATTAATGATGATTTTCGTGGTTCTCCCTCATATCAAGTTGGCACAAGCTTCTGGTTCTCTTTCTCAACCATGGTTTTCTCACAAAGGGAGAAAGTGGTTAGCAACTTGGCAAGATTTGTGATGATTATATGGATATTCGTTGTACTAATAGTGACACAGAGCTATACAGCTAGTCTAGCATCACTATTGACAGTCCAACAACTCCAACCAACTATTACTGATATAGATGATCTTTTGAGGAATAGAGATAATGTGGGCTACATGACGAGTTCTTTTGTTTATGATCTCTTGAGACAAAAAGGTTTTCATGCTTCCATGCTTAAGGATTATGGAGCTATGGAAGAAATAGATGAAGCTCTTTCAAAGGGGAGTGCAAATGGCGGTATTGCTGCTATTGTTCATGAAACCCCCTATATGAAGCTTTTTGTTGCAAAATATTGTTCCAAGTATACCATGATTGGACCTATATTTAAAACGGATGGCTTTGGCTTCATATTTCCGAAAGGTTCTCCTCTTATACCCGATGTTTCACAAGCAATCCTTAATTTGACAGAAGGAGAGAAGATAATGAACATTGAAGACGAATGGATGAAGAAAGAAAACAATTGTAAAGATCCAAGTACCGAGAAATTTTACAGCAATAGTCTTGGCCTTGAGAGCTTTTGGGGCCTCTTTCTCATTGCTGGGGTAGCTTCAGTATTCGCTCTCCTCATATTTGCAACTTCCTTCCTTCACAAGCATAAGCAAGTTTTGATGTCCTCTGATTCAAGAGCTTCCAAGTGGAAAAGGATTAGAACCATGTTCAAGATTTTCAATGAAAAAGAACTTAGCTCTCATACTTTTAAAAGCAGTAGGCATGAAGCTAGGATCGGTGGTGCTCTGGATCATGAAGTGAATGCCTCACCAAATAACAACTGGCCTGAAAAAACACCATCTCACAGTCAAGAATCTCCAGAAATCGTTCCAACTTTGGAGCTTGCTGCTTTCACTAATCAAGAAATGCATGCAACTCCGGAAATAGCTCAAGAAAGAGTTTGA

Protein Analysis

944

Amino Acids

105.97

Weight (kDa)

8.27

Isoelectric Point (pI)

35.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peripla_BP_6 PF13458 33 - 335 2.1e-19 Periplasmic binding protein
ANF_receptor PF01094 53 - 393 4.9e-76 Receptor family ligand binding region
Lig_chan-Glu_bd PF10613 470 - 557 3e-07 Ligated ion channel L-glutamate- and glycine-binding site
SBP_bac_3 PF00497 476 - 797 1.2e-10 Bacterial extracellular solute-binding proteins, family 3
Lig_chan PF00060 575 - 830 1.3e-41 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 248
AatII GACGTC 1 cut(s) 1437
Acc36I ACCTGC 2 cut(s) 248, 1004
Acc65I GGTACC 1 cut(s) 1349
AccB1I GGYRCC 2 cut(s) 260, 1349
AccB7I CCANNNNNTGG 1 cut(s) 1217
AccI GTMKAC 3 cut(s) 120, 522, 2246
AccIII TCCGGA 1 cut(s) 2809
AciI CCGC 3 cut(s) 264, 1234, 2178
AclWI GGATC 7 cut(s) 21, 773, 1330, 1471, 2405, 2672, 2688
AcoI YGGCCR 1 cut(s) 990
AcsI RAATTY 3 cut(s) 1022, 1394, 2426
AcuI CTGAAG 2 cut(s) 792, 2475
AcyI GRCGYC 1 cut(s) 1434
AfaI GTAC 7 cut(s) 149, 369, 1258, 1351, 1560, 1941, 2419
AfiI CCNNNNNNNGG 3 cut(s) 313, 1217, 1346
AflII CTTAAG 1 cut(s) 2117
AflIII ACRYGT 1 cut(s) 528
AgeI ACCGGT 1 cut(s) 313
AjnI CCWGG 2 cut(s) 227, 1300
Alw21I GWGCWC 2 cut(s) 8, 2677
Alw26I GTCTC 4 cut(s) 493, 1110, 1153, 2083
AlwI GGATC 7 cut(s) 21, 773, 1330, 1471, 2405, 2672, 2688
Ama87I CYCGRG 1 cut(s) 672
Aor13HI TCCGGA 1 cut(s) 2809
AoxI GGCC 6 cut(s) 829, 990, 1298, 2446, 2464, 2714
ApeKI GCWGC 6 cut(s) 74, 77, 266, 971, 2186, 2777
ApoI RAATTY 3 cut(s) 1022, 1394, 2426
AseI ATTAAT 2 cut(s) 1095, 1800
AsiGI ACCGGT 1 cut(s) 313
Asp700I GAANNNNTTC 2 cut(s) 1386, 2757
Asp718I GGTACC 1 cut(s) 1349
AspA2I CCTAGG 1 cut(s) 307
AspLEI GCGC 1 cut(s) 172
AspS9I GGNCC 6 cut(s) 311, 1184, 1689, 1729, 2258, 2464
AsuHPI GGTGA 2 cut(s) 402, 2691
AvaI CYCGRG 1 cut(s) 672
AvaII GGWCC 5 cut(s) 311, 1184, 1689, 1729, 2258
AvrII CCTAGG 1 cut(s) 307
BaeGI GKGCMC 1 cut(s) 513
BanI GGYRCC 2 cut(s) 260, 1349
BanII GRGCYC 1 cut(s) 8
BarI GAAGNNNNNNTAC 2 cut(s) 531, 563
BauI CACGAG 1 cut(s) 363
BbsI GAAGAC 1 cut(s) 2382
Bbv12I GWGCWC 2 cut(s) 8, 2677
BbvI GCAGC 6 cut(s) 64, 86, 278, 958, 2173, 2764
BceAI ACGGC 2 cut(s) 977, 1451
BciT130I CCWGG 2 cut(s) 229, 1302
BciVI GTATCC 1 cut(s) 1193
BclI TGATCA 1 cut(s) 628
BcoDI GTCTC 4 cut(s) 493, 1110, 1153, 2083
BfaI CTAG 7 cut(s) 210, 308, 617, 842, 1968, 1973, 2661
BfmI CTRYAG 1 cut(s) 595
BfoI RGCGCY 1 cut(s) 173
BfrI CTTAAG 1 cut(s) 2117
BfuAI ACCTGC 2 cut(s) 248, 1004
BfuI GTATCC 1 cut(s) 1193
BglI GCCNNNNNGGC 1 cut(s) 71
BglII AGATCT 1 cut(s) 274
BisI GCNGC 7 cut(s) 75, 78, 264, 267, 972, 2187, 2778
BlnI CCTAGG 1 cut(s) 307
BlsI GCNGC 7 cut(s) 76, 79, 265, 268, 973, 2188, 2779
Bme1390I CCNGG 2 cut(s) 229, 1302
Bme18I GGWCC 5 cut(s) 311, 1184, 1689, 1729, 2258
BmeT110I CYCGRG 1 cut(s) 672
BmgT120I GGNCC 6 cut(s) 311, 1184, 1689, 1729, 2258, 2464
BmiI GGNNCC 4 cut(s) 262, 1351, 1730, 2465
BmrFI CCNGG 2 cut(s) 229, 1302
BmrI ACTGGG 1 cut(s) 92
BmsI GCATC 9 cut(s) 168, 553, 571, 654, 684, 813, 958, 1567, 1985
BmuI ACTGGG 1 cut(s) 92
BoxI GACNNNNGTC 2 cut(s) 316, 674
BpiI GAAGAC 1 cut(s) 2382
BpmI CTGGAG 3 cut(s) 1134, 1323, 2733
BpuEI CTTGAG 4 cut(s) 172, 2107, 2471, 2805
BsaAI YACGTR 1 cut(s) 520
BsaHI GRCGYC 1 cut(s) 1434
BsaJI CCNNGG 7 cut(s) 69, 307, 413, 723, 857, 987, 1866
BsaWI WCCGGW 2 cut(s) 313, 2809
BsaXI ACNNNNNCTCC 4 cut(s) 102, 132, 234, 264
Bsc4I CCNNNNNNNGG 3 cut(s) 313, 1217, 1346
Bse118I RCCGGY 1 cut(s) 313
Bse1I ACTGG 5 cut(s) 98, 945, 1208, 1444, 2717
Bse3DI GCAATG 1 cut(s) 2475
BseAI TCCGGA 1 cut(s) 2809
BseBI CCWGG 2 cut(s) 229, 1302
BseDI CCNNGG 7 cut(s) 69, 307, 413, 723, 857, 987, 1866
BseGI GGATG 7 cut(s) 303, 500, 588, 1334, 1743, 2281, 2391
BseLI CCNNNNNNNGG 3 cut(s) 313, 1217, 1346
BseMI GCAATG 1 cut(s) 2475
BseNI ACTGG 5 cut(s) 98, 945, 1208, 1444, 2717
BseRI GAGGAG 2 cut(s) 2298, 2495
BseSI GKGCMC 1 cut(s) 513
BseXI GCAGC 6 cut(s) 64, 86, 278, 958, 2173, 2764
BseYI CCCAGC 1 cut(s) 2480
BshFI GGCC 6 cut(s) 831, 992, 1300, 2448, 2466, 2716
BshNI GGYRCC 2 cut(s) 260, 1349
BshTI ACCGGT 1 cut(s) 313
BsiHKAI GWGCWC 2 cut(s) 8, 2677
BsiHKCI CYCGRG 1 cut(s) 672
BsiSI CCGG 2 cut(s) 314, 2810
BslFI GGGAC 1 cut(s) 1742
BslI CCNNNNNNNGG 3 cut(s) 313, 1217, 1346
BsmAI GTCTC 4 cut(s) 493, 1110, 1153, 2083
BsmBI CGTCTC 1 cut(s) 493
BsmFI GGGAC 1 cut(s) 1742
BsmI GAATGC 2 cut(s) 1042, 2698
BsnI GGCC 6 cut(s) 831, 992, 1300, 2448, 2466, 2716
BsoBI CYCGRG 1 cut(s) 672
Bsp1286I GDGCHC 3 cut(s) 8, 513, 2677
Bsp13I TCCGGA 1 cut(s) 2809
Bsp19I CCATGG 3 cut(s) 69, 987, 1866
BspACI CCGC 3 cut(s) 264, 1234, 2178
BspANI GGCC 6 cut(s) 831, 992, 1300, 2448, 2466, 2716
BspEI TCCGGA 1 cut(s) 2809
BspHI TCATGA 2 cut(s) 2197, 2683
BspLI GGNNCC 4 cut(s) 262, 1351, 1730, 2465
BspMI ACCTGC 2 cut(s) 248, 1004
BspPI GGATC 7 cut(s) 21, 773, 1330, 1471, 2405, 2672, 2688
BspT107I GGYRCC 2 cut(s) 260, 1349
BspTI CTTAAG 1 cut(s) 2117
BsrDI GCAATG 1 cut(s) 2475
BsrFI RCCGGY 1 cut(s) 313
BsrI ACTGG 5 cut(s) 98, 945, 1208, 1444, 2717
BssAI RCCGGY 1 cut(s) 313
BssECI CCNNGG 7 cut(s) 69, 307, 413, 723, 857, 987, 1866
BssNAI GTATAC 1 cut(s) 2247
BssNI GRCGYC 1 cut(s) 1434
BssSI CACGAG 1 cut(s) 363
BssT1I CCWWGG 7 cut(s) 69, 307, 413, 723, 857, 987, 1866
Bst1107I GTATAC 1 cut(s) 2247
Bst2BI CACGAG 1 cut(s) 363
Bst2UI CCWGG 2 cut(s) 229, 1302
Bst4CI ACNGT 4 cut(s) 1195, 1429, 1990, 2738
Bst6I CTCTTC 1 cut(s) 17
BstACI GRCGYC 1 cut(s) 1434
BstAFI CTTAAG 1 cut(s) 2117
BstAPI GCANNNNNTGC 2 cut(s) 694, 968
BstBAI YACGTR 1 cut(s) 520
BstC8I GCNNGC 5 cut(s) 82, 330, 960, 2775, 2802
BstDEI CTNAG 3 cut(s) 872, 1283, 2624
BstDSI CCRYGG 3 cut(s) 69, 987, 1866
BstF5I GGATG 7 cut(s) 303, 500, 588, 1334, 1743, 2281, 2391
BstH2I RGCGCY 1 cut(s) 173
BstHHI GCGC 1 cut(s) 172
BstMAI GTCTC 4 cut(s) 493, 1110, 1153, 2083
BstNI CCWGG 2 cut(s) 229, 1302
BstNSI RCATGY 2 cut(s) 532, 2804
BstPAI GACNNNNGTC 2 cut(s) 316, 674
BstSCI CCNGG 2 cut(s) 227, 1300
BstSFI CTRYAG 1 cut(s) 595
BstSLI GKGCMC 1 cut(s) 513
BstSNI TACGTA 1 cut(s) 520
BstV1I GCAGC 6 cut(s) 64, 86, 278, 958, 2173, 2764
BstV2I GAAGAC 1 cut(s) 2382
BstX2I RGATCY 4 cut(s) 274, 1335, 1476, 2410
BstYI RGATCY 4 cut(s) 274, 1335, 1476, 2410
BstZ17I GTATAC 1 cut(s) 2247
BsuI GTATCC 1 cut(s) 1193
BsuRI GGCC 6 cut(s) 831, 992, 1300, 2448, 2466, 2716
BtgI CCRYGG 3 cut(s) 69, 987, 1866
BtsCI GGATG 7 cut(s) 303, 500, 588, 1334, 1743, 2281, 2391
BtsIMutI CAGTG 2 cut(s) 105, 1437
BveI ACCTGC 2 cut(s) 248, 1004
Cac8I GCNNGC 5 cut(s) 82, 330, 960, 2775, 2802
CciI TCATGA 2 cut(s) 2197, 2683
CfoI GCGC 1 cut(s) 172
Cfr10I RCCGGY 1 cut(s) 313
Cfr13I GGNCC 6 cut(s) 311, 1184, 1689, 1729, 2258, 2464
CseI GACGC 1 cut(s) 953
Csp6I GTAC 7 cut(s) 148, 368, 1257, 1350, 1559, 1940, 2418
CspAI ACCGGT 1 cut(s) 313
CviQI GTAC 7 cut(s) 148, 368, 1257, 1350, 1559, 1940, 2418
DdeI CTNAG 3 cut(s) 872, 1283, 2624
DraI TTTAAA 4 cut(s) 1021, 1462, 2269, 2641
EaeI YGGCCR 1 cut(s) 990
Eam1104I CTCTTC 1 cut(s) 17
EarI CTCTTC 1 cut(s) 17
Ecl136II GAGCTC 1 cut(s) 6
Eco105I TACGTA 1 cut(s) 520
Eco130I CCWWGG 7 cut(s) 69, 307, 413, 723, 857, 987, 1866
Eco147I AGGCCT 1 cut(s) 831
Eco24I GRGCYC 1 cut(s) 8
Eco47I GGWCC 5 cut(s) 311, 1184, 1689, 1729, 2258
Eco53kI GAGCTC 1 cut(s) 6
Eco57I CTGAAG 2 cut(s) 792, 2475
Eco88I CYCGRG 1 cut(s) 672
EcoICRI GAGCTC 1 cut(s) 6
EcoO109I RGGNCCY 2 cut(s) 1729, 2464
EcoRII CCWGG 2 cut(s) 227, 1300
EcoT14I CCWWGG 7 cut(s) 69, 307, 413, 723, 857, 987, 1866
EcoT22I ATGCAT 2 cut(s) 1084, 2802
EcoT38I GRGCYC 1 cut(s) 8
ErhI CCWWGG 7 cut(s) 69, 307, 413, 723, 857, 987, 1866
Esp3I CGTCTC 1 cut(s) 493
FalI AAGNNNNNCTT 2 cut(s) 2322, 2354
FaqI GGGAC 1 cut(s) 1742
FauNDI CATATG 3 cut(s) 690, 964, 1486
FbaI TGATCA 1 cut(s) 628
FblI GTMKAC 3 cut(s) 120, 522, 2246
Fnu4HI GCNGC 7 cut(s) 75, 78, 264, 267, 972, 2187, 2778
FokI GGATG 7 cut(s) 290, 507, 575, 1341, 1750, 2288, 2398
FriOI GRGCYC 1 cut(s) 8
Fsp4HI GCNGC 7 cut(s) 75, 78, 264, 267, 972, 2187, 2778
FspBI CTAG 7 cut(s) 210, 308, 617, 842, 1968, 1973, 2661
GlaI GCGC 1 cut(s) 171
GluI GCNGC 7 cut(s) 75, 78, 264, 267, 972, 2187, 2778
GsaI CCCAGC 1 cut(s) 2484
GsuI CTGGAG 3 cut(s) 1134, 1323, 2733
HaeII RGCGCY 1 cut(s) 173
HaeIII GGCC 6 cut(s) 831, 992, 1300, 2448, 2466, 2716
HapII CCGG 2 cut(s) 314, 2810
HgaI GACGC 1 cut(s) 953
HhaI GCGC 1 cut(s) 172
Hin1I GRCGYC 1 cut(s) 1434
Hin6I GCGC 1 cut(s) 170
HinP1I GCGC 1 cut(s) 170
HincII GTYRAC 1 cut(s) 1432
HindII GTYRAC 1 cut(s) 1432
HindIII AAGCTT 3 cut(s) 869, 1843, 2216
HinfI GANTC 9 cut(s) 543, 670, 675, 818, 1307, 1443, 1649, 2561, 2744
HpaII CCGG 2 cut(s) 314, 2810
HphI GGTGA 2 cut(s) 402, 2691
Hpy166II GTNNAC 6 cut(s) 103, 121, 368, 523, 1432, 2247
Hpy188I TCNGA 8 cut(s) 178, 279, 434, 486, 633, 1648, 2298, 2560
Hpy8I GTNNAC 6 cut(s) 103, 121, 368, 523, 1432, 2247
HpyAV CCTTC 8 cut(s) 44, 408, 533, 1057, 1376, 2345, 2533, 2537
HpyCH4III ACNGT 4 cut(s) 1195, 1429, 1990, 2738
HpyCH4IV ACGT 4 cut(s) 105, 519, 576, 1434
HpyF3I CTNAG 3 cut(s) 872, 1283, 2624
HpySE526I ACGT 4 cut(s) 105, 519, 576, 1434
Hsp92I GRCGYC 1 cut(s) 1434
HspAI GCGC 1 cut(s) 170
Kpn2I TCCGGA 1 cut(s) 2809
KpnI GGTACC 1 cut(s) 1353
Ksp22I TGATCA 1 cut(s) 628
LmnI GCTCC 3 cut(s) 254, 2129, 2770
Lsp1109I GCAGC 6 cut(s) 64, 86, 278, 958, 2173, 2764
LweI GCATC 9 cut(s) 168, 553, 571, 654, 684, 813, 958, 1567, 1985
MaeI CTAG 7 cut(s) 210, 308, 617, 842, 1968, 1973, 2661
MaeII ACGT 4 cut(s) 105, 519, 576, 1434
MaeIII GTNAC 3 cut(s) 1405, 1435, 1948
MboII GAAGA 7 cut(s) 29, 34, 1035, 2150, 2371, 2387, 2401
MfeI CAATTG 2 cut(s) 1518, 2401
MflI RGATCY 4 cut(s) 274, 1335, 1476, 2410
MhlI GDGCHC 3 cut(s) 8, 513, 2677
MlyI GAGTC 4 cut(s) 552, 664, 684, 1316
MmeI TCCRAC 7 cut(s) 232, 931, 1177, 1567, 2017, 2026, 2786
Mph1103I ATGCAT 2 cut(s) 1084, 2802
MroI TCCGGA 1 cut(s) 2809
MroXI GAANNNNTTC 2 cut(s) 1386, 2757
MslI CAYNNNNRTG 1 cut(s) 164
MspA1I CMGCKG 1 cut(s) 77
MspCI CTTAAG 1 cut(s) 2117
MspI CCGG 2 cut(s) 314, 2810
MspR9I CCNGG 2 cut(s) 229, 1302
MunI CAATTG 2 cut(s) 1518, 2401
Mva1269I GAATGC 2 cut(s) 1042, 2698
MvaI CCWGG 2 cut(s) 229, 1302
NcoI CCATGG 3 cut(s) 69, 987, 1866
NdeI CATATG 3 cut(s) 690, 964, 1486
NlaIV GGNNCC 4 cut(s) 262, 1351, 1730, 2465
NmuCI GTSAC 2 cut(s) 1435, 1948
NsiI ATGCAT 2 cut(s) 1084, 2802
NspI RCATGY 2 cut(s) 532, 2804
PaeI GCATGC 1 cut(s) 2804
PaeR7I CTCGAG 1 cut(s) 672
PagI TCATGA 2 cut(s) 2197, 2683
PaqCI CACCTGC 1 cut(s) 248
PceI AGGCCT 1 cut(s) 831
PciI ACATGT 1 cut(s) 528
PctI GAATGC 2 cut(s) 1042, 2698
PdmI GAANNNNTTC 2 cut(s) 1386, 2757
PfeI GAWTC 5 cut(s) 818, 1443, 1649, 2561, 2744
PflMI CCANNNNNTGG 1 cut(s) 1217
PinAI ACCGGT 1 cut(s) 313
PkrI GCNGC 7 cut(s) 76, 79, 265, 268, 973, 2188, 2779
PleI GAGTC 4 cut(s) 551, 664, 683, 1315
PpsI GAGTC 4 cut(s) 551, 664, 683, 1315
Ppu21I YACGTR 1 cut(s) 520
PpuMI RGGWCCY 1 cut(s) 1729
PscI ACATGT 1 cut(s) 528
PshAI GACNNNNGTC 2 cut(s) 316, 674
PshBI ATTAAT 2 cut(s) 1095, 1800
Psp124BI GAGCTC 1 cut(s) 8
Psp5II RGGWCCY 1 cut(s) 1729
Psp6I CCWGG 2 cut(s) 227, 1300
PspFI CCCAGC 1 cut(s) 2480
PspGI CCWGG 2 cut(s) 227, 1300
PspN4I GGNNCC 4 cut(s) 262, 1351, 1730, 2465
PspPI GGNCC 6 cut(s) 311, 1184, 1689, 1729, 2258, 2464
PspPPI RGGWCCY 1 cut(s) 1729
PspXI VCTCGAGB 1 cut(s) 672
PsuI RGATCY 4 cut(s) 274, 1335, 1476, 2410
PvuII CAGCTG 1 cut(s) 77
RsaI GTAC 7 cut(s) 149, 369, 1258, 1351, 1560, 1941, 2419
RsaNI GTAC 7 cut(s) 148, 368, 1257, 1350, 1559, 1940, 2418
RseI CAYNNNNRTG 1 cut(s) 164
SacI GAGCTC 1 cut(s) 8
SatI GCNGC 7 cut(s) 75, 78, 264, 267, 972, 2187, 2778
Sau96I GGNCC 6 cut(s) 311, 1184, 1689, 1729, 2258, 2464
SchI GAGTC 4 cut(s) 552, 664, 684, 1316
ScrFI CCNGG 2 cut(s) 229, 1302
SduI GDGCHC 3 cut(s) 8, 513, 2677
SfaNI GCATC 9 cut(s) 168, 553, 571, 654, 684, 813, 958, 1567, 1985
SfcI CTRYAG 1 cut(s) 595
Sfr274I CTCGAG 1 cut(s) 672
SinI GGWCC 5 cut(s) 311, 1184, 1689, 1729, 2258
SlaI CTCGAG 1 cut(s) 672
SmiMI CAYNNNNRTG 1 cut(s) 164
SmlI CTYRAG 6 cut(s) 151, 672, 2086, 2117, 2450, 2820
SmoI CTYRAG 6 cut(s) 151, 672, 2086, 2117, 2450, 2820
SnaBI TACGTA 1 cut(s) 520
SphI GCATGC 1 cut(s) 2804
SseBI AGGCCT 1 cut(s) 831
SsiI CCGC 3 cut(s) 264, 1234, 2178
SspI AATATT 1 cut(s) 2234
SspMI CTAG 7 cut(s) 210, 308, 617, 842, 1968, 1973, 2661
SstI GAGCTC 1 cut(s) 8
StuI AGGCCT 1 cut(s) 831
StyD4I CCNGG 2 cut(s) 227, 1300
StyI CCWWGG 7 cut(s) 69, 307, 413, 723, 857, 987, 1866
TaaI ACNGT 4 cut(s) 1195, 1429, 1990, 2738
TaiI ACGT 4 cut(s) 108, 522, 579, 1437
TaqI TCGA 5 cut(s) 162, 673, 821, 1244, 1795
TatI WGTACW 4 cut(s) 147, 1256, 1558, 1939
TauI GCSGC 1 cut(s) 266
TfiI GAWTC 5 cut(s) 818, 1443, 1649, 2561, 2744
TscAI CASTG 2 cut(s) 105, 1444
TseFI GTSAC 2 cut(s) 1435, 1948
TseI GCWGC 6 cut(s) 74, 77, 266, 971, 2186, 2777
Tsp45I GTSAC 2 cut(s) 1435, 1948
TspGWI ACGGA 1 cut(s) 2288
TspRI CASTG 2 cut(s) 105, 1444
Van91I CCANNNNNTGG 1 cut(s) 1217
Vha464I CTTAAG 1 cut(s) 2117
VpaK11BI GGWCC 5 cut(s) 311, 1184, 1689, 1729, 2258
VspI ATTAAT 2 cut(s) 1095, 1800
XapI RAATTY 3 cut(s) 1022, 1394, 2426
XbaI TCTAGA 1 cut(s) 841
XceI RCATGY 2 cut(s) 532, 2804
XcmI CCANNNNNNNNNTGG 2 cut(s) 244, 2709
XhoI CTCGAG 1 cut(s) 672
XmaJI CCTAGG 1 cut(s) 307
XmiI GTMKAC 3 cut(s) 120, 522, 2246
XmnI GAANNNNTTC 2 cut(s) 1386, 2757
XspI CTAG 7 cut(s) 210, 308, 617, 842, 1968, 1973, 2661
ZraI GACGTC 1 cut(s) 1435
Zsp2I ATGCAT 2 cut(s) 1084, 2802
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.