Rmu_sc0004688.1_g000001

Glutamate receptor

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004688.1
Physical Location & Seq
Forward (+)
174 .. 2685
2512 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004688.1_g000001.1.cds

Sequence Viewer

Length: 2076 bp
atgcaaggggtgttgggtttgaagacttatgttccacgtacggaaaagcttgaagattttagaggcagatggcaaaggcgattccaacaagacaatccaactctccttaatcttaaattggatgtctttggactgtgggcttatgatgcttcttgggcactagctatggcgtttgagaaggttgtgactgtgaactatcacttccaaaacatcaacatttctggtagtcactctggtcaaaaaagattggaggtcactcaaagcagtcctaaactcatcaaagaactatcaggtacagtattcagaggactttcaggagtattcagtctcataaatgggcaactacaatcgtcaaattttcaggttgttaatgtgaatgacaatggggaaagaggagttggatattggacaccccaaaatggacttgtaagaaaccttaactcaaaagaccctgcaggcagatattctaattcttgtgccaaacttggaactattatatggcccggagataccacctcagttccaaggggttggaggtttcctggtgatgggagaagactgaaaattctagtcccagtgaagaaaagttttggagaatttgtacatgtatctggttctgatttcagtggatactgcatagatgtctttcaagctgtattaaactcattagcatatggtgtcccttatgcattttatccatttgcaaattctgatggtgagagtgctggtacttacgatgatttggtttatcaagtgtttcttgggaactatgatgctgcagtaggtgatataaccattagagcaaatagatccttatatgttgacttcacattgccatacaacgaatccgggatatcaatggtcctgcccatcaaaaatcacaatgatgctaaaagcacatggatcttcttgaagcctttgacttgggacctttgggtaacaagtggttgttttttcatattcattggttttgtagtctgggtccttgaacatcggataaatgaagacttccgagggcctccacattaccaaattggcacaagcttttggttctccttctcaaccatggtctttgcacaccgggagcgagtagtgagcaacctggctaggtttgtcatgatcatatggtgctttgttgttctcatactgactcagagttatactgccagttttagtaccattttaacagttcaacaactccgaccaatcattactgatgtaaacctgctcatgaaaaatggggacaatgttggctaccatgcagattcgtttgtatatgggattttgaaagaattaggatttcaagagggaaaacttaagaagtatgaaagcatagaaaagttggatgaacttcttcaaaagggaaatgaaaaagatggcatttccgctgcttttgatgaaaccccatacatgaaactttttgctgcaacttattgctccaaatataccttggttgagccaacattcaaatcagaaggttttgcctttgtcttcccaaaaggttcagtttttgcacgtgatgtttcacgggcgataactagtttgcaggagcaagatgatatgaaggctatcgcagagaagtggttcgagaaactagctagttgttcaaacaccaagcctgcaggctcttctaacagccttactctcggcgttgacagcttttggggcctttacatcattgccggagttgcttcatcattagctctcctcatattttcagctatgttcttgtatgagcacatgcacaccttgacgagctttgatccagaaacctcattttggtcaagaatttgtctcctatggagagtatatgaccaaagagaccctgcttcgcatacatgtactcatcacaagagacaactgcaacattctggtgttgatataataggtgctgttgaagcctcaccaaacagcaactctcccccaaggccatccagctcaagcaacatggaatcccaccttgttgttgaagagctggggactcttcctactgagattgagcatcgcagcggtcgagcaactccagaggttgaatgtgcaatcaacttaactcccccaagtgaagcgaggcattag

Protein Analysis

691

Amino Acids

77.58

Weight (kDa)

6.51

Isoelectric Point (pI)

36.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1233
AciI CCGC 2 cut(s) 1386, 2010
AclWI GGATC 3 cut(s) 804, 911, 1757
AcsI RAATTY 5 cut(s) 355, 564, 596, 706, 1788
AcvI CACGTG 1 cut(s) 1517
AfaI GTAC 6 cut(s) 40, 295, 603, 730, 1177, 1843
AfiI CCNNNNNNNGG 3 cut(s) 419, 548, 1779
AflII CTTAAG 1 cut(s) 1316
AflIII ACRYGT 2 cut(s) 604, 1838
AhlI ACTAGT 1 cut(s) 1538
AjnI CCWGG 2 cut(s) 541, 1101
AjuI GAANNNNNNNTTGG 2 cut(s) 381, 413
Alw21I GWGCWC 1 cut(s) 1740
Alw26I GTCTC 4 cut(s) 332, 1799, 1815, 1849
AlwI GGATC 3 cut(s) 804, 911, 1757
AoxI GGCC 4 cut(s) 500, 1016, 1666, 1928
ApeKI GCWGC 4 cut(s) 776, 1388, 1424, 2007
ApoI RAATTY 5 cut(s) 355, 564, 596, 706, 1788
Asp700I GAANNNNTTC 2 cut(s) 1353, 1583
AspS9I GGNCC 6 cut(s) 501, 862, 928, 982, 1016, 1666
AsuC2I CCSGG 3 cut(s) 504, 850, 1082
AsuHPI GGTGA 4 cut(s) 557, 728, 797, 1896
AvaII GGWCC 3 cut(s) 862, 928, 982
BaeGI GKGCMC 1 cut(s) 160
BbrPI CACGTG 1 cut(s) 1517
BbsI GAAGAC 4 cut(s) 29, 562, 1011, 1483
Bbv12I GWGCWC 1 cut(s) 1740
BbvI GCAGC 4 cut(s) 763, 1375, 1411, 2019
BccI CCATC 6 cut(s) 63, 542, 707, 878, 1370, 1939
BciT130I CCWGG 2 cut(s) 543, 1103
BciVI GTATCC 1 cut(s) 623
BclI TGATCA 1 cut(s) 1119
BcnI CCSGG 3 cut(s) 504, 850, 1082
BcoDI GTCTC 4 cut(s) 332, 1799, 1815, 1849
BcuI ACTAGT 1 cut(s) 1538
BfaI CTAG 6 cut(s) 161, 569, 1107, 1539, 1595, 1599
BfmI CTRYAG 3 cut(s) 453, 777, 1620
BfrI CTTAAG 1 cut(s) 1316
BfuAI ACCTGC 1 cut(s) 1233
BfuI GTATCC 1 cut(s) 623
BisI GCNGC 4 cut(s) 777, 1389, 1425, 2008
BlsI GCNGC 4 cut(s) 778, 1390, 1426, 2009
Bme1390I CCNGG 5 cut(s) 504, 543, 850, 1082, 1103
Bme18I GGWCC 3 cut(s) 862, 928, 982
BmgT120I GGNCC 6 cut(s) 501, 862, 928, 982, 1016, 1666
BmiI GGNNCC 3 cut(s) 929, 983, 1667
BmrFI CCNGG 5 cut(s) 504, 543, 850, 1082, 1103
BmrI ACTGGG 1 cut(s) 569
BmsI GCATC 4 cut(s) 136, 763, 877, 2011
BmuI ACTGGG 1 cut(s) 569
BpiI GAAGAC 4 cut(s) 29, 562, 1011, 1483
BpmI CTGGAG 1 cut(s) 2007
BpuEI CTTGAG 1 cut(s) 1924
BpuMI CCSGG 3 cut(s) 504, 850, 1082
BsaAI YACGTR 2 cut(s) 38, 1517
BsaI GGTCTC 1 cut(s) 1815
BsaJI CCNNGG 5 cut(s) 524, 1012, 1065, 1449, 1925
BsaXI ACNNNNNCTCC 2 cut(s) 585, 615
Bsc4I CCNNNNNNNGG 3 cut(s) 419, 548, 1779
Bse1I ACTGG 2 cut(s) 575, 1167
Bse3DI GCAATG 2 cut(s) 830, 1677
BseBI CCWGG 2 cut(s) 543, 1103
BseDI CCNNGG 5 cut(s) 524, 1012, 1065, 1449, 1925
BseGI GGATG 3 cut(s) 127, 1351, 1931
BseLI CCNNNNNNNGG 3 cut(s) 419, 548, 1779
BseMI GCAATG 2 cut(s) 830, 1677
BseMII CTCAG 3 cut(s) 531, 1166, 1983
BseNI ACTGG 2 cut(s) 575, 1167
BseRI GAGGAG 2 cut(s) 408, 1697
BseSI GKGCMC 1 cut(s) 160
BseXI GCAGC 4 cut(s) 763, 1375, 1411, 2019
BseYI CCCAGC 1 cut(s) 1975
Bsh1285I CGRYCG 1 cut(s) 2014
BshFI GGCC 4 cut(s) 502, 1018, 1668, 1930
BsiEI CGRYCG 1 cut(s) 2014
BsiHKAI GWGCWC 1 cut(s) 1740
BsiSI CCGG 4 cut(s) 504, 849, 1081, 1683
BsiWI CGTACG 1 cut(s) 38
BslFI GGGAC 5 cut(s) 557, 665, 941, 1256, 1993
BslI CCNNNNNNNGG 3 cut(s) 419, 548, 1779
BsmAI GTCTC 4 cut(s) 332, 1799, 1815, 1849
BsmFI GGGAC 5 cut(s) 557, 665, 941, 1256, 1993
BsnI GGCC 4 cut(s) 502, 1018, 1668, 1930
Bso31I GGTCTC 1 cut(s) 1815
Bsp1286I GDGCHC 2 cut(s) 160, 1740
Bsp1407I TGTACA 1 cut(s) 601
Bsp143I GATC 4 cut(s) 809, 903, 1119, 1762
Bsp19I CCATGG 1 cut(s) 1065
BspACI CCGC 2 cut(s) 1386, 2010
BspANI GGCC 4 cut(s) 502, 1018, 1668, 1930
BspCNI CTCAG 3 cut(s) 530, 1165, 1984
BspHI TCATGA 2 cut(s) 1116, 1230
BspLI GGNNCC 3 cut(s) 929, 983, 1667
BspMAI CTGCAG 3 cut(s) 457, 781, 1624
BspMI ACCTGC 1 cut(s) 1233
BspPI GGATC 3 cut(s) 804, 911, 1757
BspQI GCTCTTC 2 cut(s) 1633, 1965
BspTI CTTAAG 1 cut(s) 1316
BspTNI GGTCTC 1 cut(s) 1815
BsrDI GCAATG 2 cut(s) 830, 1677
BsrGI TGTACA 1 cut(s) 601
BsrI ACTGG 2 cut(s) 575, 1167
BssECI CCNNGG 5 cut(s) 524, 1012, 1065, 1449, 1925
BssMI GATC 4 cut(s) 809, 903, 1119, 1762
BssT1I CCWWGG 4 cut(s) 524, 1065, 1449, 1925
Bst2UI CCWGG 2 cut(s) 543, 1103
Bst4CI ACNGT 4 cut(s) 135, 190, 298, 1189
Bst6I CTCTTC 3 cut(s) 1633, 1965, 1989
BstAFI CTTAAG 1 cut(s) 1316
BstAUI TGTACA 1 cut(s) 601
BstBAI YACGTR 2 cut(s) 38, 1517
BstC8I GCNNGC 3 cut(s) 457, 1620, 1624
BstDEI CTNAG 3 cut(s) 517, 1152, 1992
BstDSI CCRYGG 1 cut(s) 1065
BstF5I GGATG 3 cut(s) 127, 1351, 1931
BstKTI GATC 4 cut(s) 812, 906, 1122, 1765
BstMAI GTCTC 4 cut(s) 332, 1799, 1815, 1849
BstMBI GATC 4 cut(s) 809, 903, 1119, 1762
BstMCI CGRYCG 1 cut(s) 2014
BstMWI GCNNNNNNNGC 6 cut(s) 146, 155, 1656, 1665, 1688, 1898
BstNI CCWGG 2 cut(s) 543, 1103
BstNSI RCATGY 3 cut(s) 608, 1744, 1842
BstSCI CCNGG 5 cut(s) 502, 541, 848, 1080, 1101
BstSFI CTRYAG 3 cut(s) 453, 777, 1620
BstSLI GKGCMC 1 cut(s) 160
BstV1I GCAGC 4 cut(s) 763, 1375, 1411, 2019
BstV2I GAAGAC 4 cut(s) 29, 562, 1011, 1483
BstX2I RGATCY 2 cut(s) 809, 903
BstXI CCANNNNNNTGG 1 cut(s) 531
BstYI RGATCY 2 cut(s) 809, 903
BsuI GTATCC 1 cut(s) 623
BsuRI GGCC 4 cut(s) 502, 1018, 1668, 1930
BtgI CCRYGG 1 cut(s) 1065
BtgZI GCGATG 1 cut(s) 1988
BtsCI GGATG 3 cut(s) 127, 1351, 1931
BtsIMutI CAGTG 2 cut(s) 582, 631
BveI ACCTGC 1 cut(s) 1233
Cac8I GCNNGC 3 cut(s) 457, 1620, 1624
CciI TCATGA 2 cut(s) 1116, 1230
Cfr13I GGNCC 6 cut(s) 501, 862, 928, 982, 1016, 1666
Csp6I GTAC 6 cut(s) 39, 294, 602, 729, 1176, 1842
CviQI GTAC 6 cut(s) 39, 294, 602, 729, 1176, 1842
DdeI CTNAG 3 cut(s) 517, 1152, 1992
DpnI GATC 4 cut(s) 811, 905, 1121, 1764
DpnII GATC 4 cut(s) 809, 903, 1119, 1762
Eam1104I CTCTTC 3 cut(s) 1633, 1965, 1989
EarI CTCTTC 3 cut(s) 1633, 1965, 1989
Eco130I CCWWGG 4 cut(s) 524, 1065, 1449, 1925
Eco31I GGTCTC 1 cut(s) 1815
Eco32I GATATC 1 cut(s) 855
Eco47I GGWCC 3 cut(s) 862, 928, 982
Eco72I CACGTG 1 cut(s) 1517
EcoO109I RGGNCCY 4 cut(s) 928, 982, 1016, 1666
EcoRII CCWGG 2 cut(s) 541, 1101
EcoRV GATATC 1 cut(s) 855
EcoT14I CCWWGG 4 cut(s) 524, 1065, 1449, 1925
EcoT22I ATGCAT 1 cut(s) 691
ErhI CCWWGG 4 cut(s) 524, 1065, 1449, 1925
FalI AAGNNNNNCTT 2 cut(s) 744, 776
FaqI GGGAC 5 cut(s) 557, 665, 941, 1256, 1993
FauNDI CATATG 2 cut(s) 673, 1124
FbaI TGATCA 1 cut(s) 1119
Fnu4HI GCNGC 4 cut(s) 777, 1389, 1425, 2008
FokI GGATG 3 cut(s) 134, 1358, 1918
Fsp4HI GCNGC 4 cut(s) 777, 1389, 1425, 2008
FspBI CTAG 6 cut(s) 161, 569, 1107, 1539, 1595, 1599
GluI GCNGC 4 cut(s) 777, 1389, 1425, 2008
GsaI CCCAGC 1 cut(s) 1979
GsuI CTGGAG 1 cut(s) 2007
HaeIII GGCC 4 cut(s) 502, 1018, 1668, 1930
HapII CCGG 4 cut(s) 504, 849, 1081, 1683
HincII GTYRAC 2 cut(s) 823, 1654
HindII GTYRAC 2 cut(s) 823, 1654
HindIII AAGCTT 2 cut(s) 47, 1042
HinfI GANTC 6 cut(s) 81, 845, 1150, 1265, 1952, 1981
HpaII CCGG 4 cut(s) 504, 849, 1081, 1683
HphI GGTGA 4 cut(s) 557, 728, 797, 1896
Hpy166II GTNNAC 4 cut(s) 193, 823, 1222, 1654
Hpy188I TCNGA 8 cut(s) 305, 619, 712, 996, 1013, 1155, 1202, 1474
Hpy188III TCNNGA 9 cut(s) 315, 910, 1117, 1231, 1304, 1588, 1766, 1785, 2024
Hpy8I GTNNAC 4 cut(s) 193, 823, 1222, 1654
HpyAV CCTTC 4 cut(s) 172, 1066, 1469, 1558
HpyCH4III ACNGT 4 cut(s) 135, 190, 298, 1189
HpyCH4IV ACGT 2 cut(s) 37, 1516
HpyF10VI GCNNNNNNNGC 6 cut(s) 146, 155, 1656, 1665, 1688, 1898
HpyF3I CTNAG 3 cut(s) 517, 1152, 1992
HpySE526I ACGT 2 cut(s) 37, 1516
Ksp22I TGATCA 1 cut(s) 1119
Kzo9I GATC 4 cut(s) 809, 903, 1119, 1762
LguI GCTCTTC 2 cut(s) 1633, 1965
LmnI GCTCC 3 cut(s) 1084, 1442, 1549
Lsp1109I GCAGC 4 cut(s) 763, 1375, 1411, 2019
LweI GCATC 4 cut(s) 136, 763, 877, 2011
MaeI CTAG 6 cut(s) 161, 569, 1107, 1539, 1595, 1599
MaeII ACGT 2 cut(s) 37, 1516
MaeIII GTNAC 4 cut(s) 184, 227, 253, 937
MalI GATC 4 cut(s) 811, 905, 1121, 1764
MboI GATC 4 cut(s) 809, 903, 1119, 1762
MflI RGATCY 2 cut(s) 809, 903
MhlI GDGCHC 2 cut(s) 160, 1740
MluCI AATT 9 cut(s) 116, 355, 469, 564, 596, 706, 1032, 1292, 1788
MlyI GAGTC 2 cut(s) 1144, 1975
MmeI TCCRAC 6 cut(s) 109, 122, 379, 512, 1225, 1323
Mph1103I ATGCAT 1 cut(s) 691
MroXI GAANNNNTTC 2 cut(s) 1353, 1583
MseI TTAA 8 cut(s) 108, 114, 369, 438, 659, 1184, 1317, 2048
MslI CAYNNNNRTG 2 cut(s) 885, 1872
MspA1I CMGCKG 2 cut(s) 1388, 2010
MspCI CTTAAG 1 cut(s) 1316
MspI CCGG 4 cut(s) 504, 849, 1081, 1683
MspR9I CCNGG 5 cut(s) 504, 543, 850, 1082, 1103
MvaI CCWGG 2 cut(s) 543, 1103
MwoI GCNNNNNNNGC 6 cut(s) 146, 155, 1656, 1665, 1688, 1898
NciI CCSGG 3 cut(s) 504, 850, 1082
NcoI CCATGG 1 cut(s) 1065
NdeI CATATG 2 cut(s) 673, 1124
NdeII GATC 4 cut(s) 809, 903, 1119, 1762
NlaIV GGNNCC 3 cut(s) 929, 983, 1667
NmeAIII GCCGAG 1 cut(s) 1626
NmuCI GTSAC 3 cut(s) 184, 227, 253
NsiI ATGCAT 1 cut(s) 691
NspI RCATGY 3 cut(s) 608, 1744, 1842
PagI TCATGA 2 cut(s) 1116, 1230
PciI ACATGT 2 cut(s) 604, 1838
PciSI GCTCTTC 2 cut(s) 1633, 1965
PcsI WCGNNNNNNNCGW 1 cut(s) 2011
PdmI GAANNNNTTC 2 cut(s) 1353, 1583
PfeI GAWTC 4 cut(s) 81, 845, 1265, 1952
Pfl23II CGTACG 1 cut(s) 38
PfoI TCCNGGA 1 cut(s) 848
PkrI GCNGC 4 cut(s) 778, 1390, 1426, 2009
PleI GAGTC 2 cut(s) 1144, 1975
PmaCI CACGTG 1 cut(s) 1517
PmlI CACGTG 1 cut(s) 1517
PpsI GAGTC 2 cut(s) 1144, 1975
Ppu21I YACGTR 2 cut(s) 38, 1517
PpuMI RGGWCCY 2 cut(s) 928, 982
PscI ACATGT 2 cut(s) 604, 1838
Psp5II RGGWCCY 2 cut(s) 928, 982
Psp6I CCWGG 2 cut(s) 541, 1101
PspCI CACGTG 1 cut(s) 1517
PspFI CCCAGC 1 cut(s) 1975
PspGI CCWGG 2 cut(s) 541, 1101
PspLI CGTACG 1 cut(s) 38
PspN4I GGNNCC 3 cut(s) 929, 983, 1667
PspPI GGNCC 6 cut(s) 501, 862, 928, 982, 1016, 1666
PspPPI RGGWCCY 2 cut(s) 928, 982
PstI CTGCAG 3 cut(s) 457, 781, 1624
PsuI RGATCY 2 cut(s) 809, 903
RsaI GTAC 6 cut(s) 40, 295, 603, 730, 1177, 1843
RsaNI GTAC 6 cut(s) 39, 294, 602, 729, 1176, 1842
RseI CAYNNNNRTG 2 cut(s) 885, 1872
SapI GCTCTTC 2 cut(s) 1633, 1965
SaqAI TTAA 8 cut(s) 108, 114, 369, 438, 659, 1184, 1317, 2048
SatI GCNGC 4 cut(s) 777, 1389, 1425, 2008
Sau3AI GATC 4 cut(s) 809, 903, 1119, 1762
Sau96I GGNCC 6 cut(s) 501, 862, 928, 982, 1016, 1666
SbfI CCTGCAGG 2 cut(s) 457, 1624
SchI GAGTC 2 cut(s) 1144, 1975
ScrFI CCNGG 5 cut(s) 504, 543, 850, 1082, 1103
SdaI CCTGCAGG 2 cut(s) 457, 1624
SduI GDGCHC 2 cut(s) 160, 1740
SfaNI GCATC 4 cut(s) 136, 763, 877, 2011
SfcI CTRYAG 3 cut(s) 453, 777, 1620
SinI GGWCC 3 cut(s) 862, 928, 982
SmiMI CAYNNNNRTG 2 cut(s) 885, 1872
SmlI CTYRAG 2 cut(s) 1316, 1939
SmoI CTYRAG 2 cut(s) 1316, 1939
SpeI ACTAGT 1 cut(s) 1538
Sse8387I CCTGCAGG 2 cut(s) 457, 1624
Sse9I AATT 9 cut(s) 116, 355, 469, 564, 596, 706, 1032, 1292, 1788
SsiI CCGC 2 cut(s) 1386, 2010
SspMI CTAG 6 cut(s) 161, 569, 1107, 1539, 1595, 1599
StyD4I CCNGG 5 cut(s) 502, 541, 848, 1080, 1101
StyI CCWWGG 4 cut(s) 524, 1065, 1449, 1925
TaaI ACNGT 4 cut(s) 135, 190, 298, 1189
TaiI ACGT 2 cut(s) 40, 1519
TaqI TCGA 2 cut(s) 1587, 2014
TasI AATT 9 cut(s) 116, 355, 469, 564, 596, 706, 1032, 1292, 1788
TatI WGTACW 2 cut(s) 601, 1841
TfiI GAWTC 4 cut(s) 81, 845, 1265, 1952
Tru1I TTAA 8 cut(s) 108, 114, 369, 438, 659, 1184, 1317, 2048
Tru9I TTAA 8 cut(s) 108, 114, 369, 438, 659, 1184, 1317, 2048
TscAI CASTG 2 cut(s) 582, 631
TseFI GTSAC 3 cut(s) 184, 227, 253
TseI GCWGC 4 cut(s) 776, 1388, 1424, 2007
Tsp45I GTSAC 3 cut(s) 184, 227, 253
TspGWI ACGGA 1 cut(s) 56
TspRI CASTG 2 cut(s) 582, 631
Vha464I CTTAAG 1 cut(s) 1316
VpaK11BI GGWCC 3 cut(s) 862, 928, 982
XapI RAATTY 5 cut(s) 355, 564, 596, 706, 1788
XceI RCATGY 3 cut(s) 608, 1744, 1842
XcmI CCANNNNNNNNNTGG 1 cut(s) 1447
XmnI GAANNNNTTC 2 cut(s) 1353, 1583
XspI CTAG 6 cut(s) 161, 569, 1107, 1539, 1595, 1599
Zsp2I ATGCAT 1 cut(s) 691
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.