Rw7G004960

Glutamate receptor

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
Physical Location & Seq
Forward (+)
4167344 .. 4174814
7471 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G004960.1

Sequence Viewer

Length: 1593 bp
ATGAAGACTCCCATCAGCTCTGTTTGCTCTCTCTTCTTGTTTTTTTTATTCTGCACTAGTGATAGTACCTTGGCTATGTATCCTGTTAATTATAGTGTGGGTGTGGTTCTTAACTTTGACACTGGGTTTGGAAAGATGGGGCTAAGCTGCGCATCGACATGGCCCTGTCGGACTGGTATGCTTAATTCACATCCGAATTACAATACGAGGCTTCTTCTGCACCAAAGGAACTCCCCCTCTGATGTTGTTCTTTCAGCTGCTGCAGCTCTTGACCTGATAAAGAATGTTGAAGTGCAAGCCATCGTAGGCCCTGCATCATCAATGCAGGCCAACTTCATGATCAATCTAGGAGACAAAGCACGTGTCCCCATAATCTCATTTTCAGCAACAAGCCCTTCTCTAACTTCAACTCGGAGCCCGTATTTCTTTCGAGCTGCACAAAATGACTCGTCTCAGGTGAAAGCCATAAAAGATATCATTCAAGCCTTTGGTTGGAGACAAGTAGTCCCCATGTACGTCGAGAATGAGTTTGGAGAAGGAGTAATCCCTCACCTCTCCGACGCTCTACAAGAGATTGATGTTCGAATCCCTTATCGGAGTGTTATTTCCCCAACTGCCACCGATGACCAAATTGAAGCTGAGCTTTACAAGTTGGTGACAATGCAAACAAGGGTCTTCATAGTCCACATGTTACCTTCATTAGGTTCTCGAATTTTTGAGAAAGCAAAAGAGATTGGGATGATGGATAAAGGTTATGTTTGGATAGTGACAAATGGAATTTCTAACCCCATTTCACGTCTACTAGTCACTTTTCGTTTTCCTCGTGCTATCCAATTGTTCTTTAAATTGGACTGCCATCTGTTCTGCATCATGTTTGGTTTGTTTAATTCATCTTTTGTCACGGAAAACATGCAAGGGGTGTTGGATTTAAAAACCCATGTCCCAAATCAGAAAAAGCTTGAGGCTTTCAGAGTAAGATGGAAAAAGAAATTTCAACAAGACAATCCAACTGCCATTAATGTGAATTTGGATGTGCTTGGATTGTGGGCTTATGATGCTGCCAAGGCACTAGCCATAGCAGTGGAGAAGGTTGGGAATACTAAAACCTTCACCTACCAAAAGATGAATGTTTCTGGTAGCTCCAATGATTTAGAGAGATTCGGTATCTCTCTGATTGGTCCTCAACTTGTCCAAGAGTTGCTAGGTACAAGTTTCCGAGGGCTTTCAGGGGACTTTAGTCTTATTGTGAATGTGATTGGAACTGGAGAAAATGTGGTTGCATTTTGGACACCTGAAAACGGACTAGTGAGAAACTTGCATTCCACAAAGAGCGTAAGCAGATCTTCTGCTTCTAATGCTAGTCTTGGATCGATTATATGGCCCGGAGACACCTCCTCTGCTCCAAAAGGTTGGCAGATTCCTACTAATGGGAAAAAGTTGAAGATTCTAGTTCCACTTAAAGATGGCACTAACAAAACCAAGGTCATTGGTGGATACTGCTTAGAAGTCTTTGAAGTTCCTGAAGGTGAAACTGCTGGTAGTTACAATGATTTGGTCAACCAAGTGTTTTTAGGGGTACAGATTTTATTCTGA

Protein Analysis

530

Amino Acids

58.44

Weight (kDa)

8.89

Isoelectric Point (pI)

26.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peripla_BP_6 PF13458 34 - 248 2.7e-11 Periplasmic binding protein
ANF_receptor PF01094 62 - 414 2.2e-74 Receptor family ligand binding region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 151
AccI GTMKAC 1 cut(s) 799
AclWI GGATC 1 cut(s) 1375
AcsI RAATTY 4 cut(s) 711, 777, 989, 1024
AcuI CTGAAG 1 cut(s) 1542
AcvI CACGTG 1 cut(s) 362
AfaI GTAC 4 cut(s) 67, 515, 1207, 1578
AfiI CCNNNNNNNGG 4 cut(s) 492, 701, 1298, 1427
AflIII ACRYGT 2 cut(s) 361, 687
AgsI TTSAA 7 cut(s) 290, 408, 482, 635, 995, 1441, 1514
AhdI GACNNNNNGTC 1 cut(s) 503
AhlI ACTAGT 3 cut(s) 56, 802, 1303
AjiI CACGTC 1 cut(s) 797
AluBI AGCT 9 cut(s) 18, 147, 257, 266, 434, 638, 643, 958, 1140
AluI AGCT 9 cut(s) 18, 147, 257, 266, 434, 638, 643, 958, 1140
Alw26I GTCTC 4 cut(s) 345, 456, 490, 1380
AlwI GGATC 1 cut(s) 1375
AlwNI CAGNNNCTG 1 cut(s) 260
AoxI GGCC 4 cut(s) 161, 307, 327, 1379
ApeKI GCWGC 6 cut(s) 147, 257, 260, 263, 434, 1058
ApoI RAATTY 4 cut(s) 711, 777, 989, 1024
ArsI GACNNNNNNTTYG 6 cut(s) 110, 142, 348, 380, 1467, 1499
AseI ATTAAT 1 cut(s) 1017
AspLEI GCGC 1 cut(s) 152
AspS9I GGNCC 4 cut(s) 162, 308, 1178, 1380
AsuC2I CCSGG 1 cut(s) 1383
AsuHPI GGTGA 5 cut(s) 469, 542, 667, 1102, 1538
AsuII TTCGAA 1 cut(s) 583
AvaII GGWCC 1 cut(s) 1178
BanII GRGCYC 1 cut(s) 419
BauI CACGAG 1 cut(s) 822
BbrPI CACGTG 1 cut(s) 362
BbsI GAAGAC 2 cut(s) 11, 667
BbvI GCAGC 6 cut(s) 134, 244, 247, 275, 421, 1045
BccI CCATC 7 cut(s) 20, 130, 308, 736, 864, 972, 1457
BciVI GTATCC 2 cut(s) 90, 1487
BclI TGATCA 1 cut(s) 339
BcnI CCSGG 1 cut(s) 1383
BcoDI GTCTC 4 cut(s) 345, 456, 490, 1380
BcuI ACTAGT 3 cut(s) 56, 802, 1303
BfaI CTAG 8 cut(s) 57, 347, 803, 1070, 1202, 1304, 1359, 1448
BfmI CTRYAG 1 cut(s) 261
BfuI GTATCC 2 cut(s) 90, 1487
BglII AGATCT 1 cut(s) 1340
BisI GCNGC 6 cut(s) 148, 258, 261, 264, 435, 1059
BlpI GCTNAGC 2 cut(s) 143, 639
BlsI GCNGC 6 cut(s) 149, 259, 262, 265, 436, 1060
Bme1390I CCNGG 1 cut(s) 1383
Bme18I GGWCC 1 cut(s) 1178
BmeRI GACNNNNNGTC 1 cut(s) 503
BmgBI CACGTC 1 cut(s) 797
BmgT120I GGNCC 4 cut(s) 162, 308, 1178, 1380
BmiI GGNNCC 1 cut(s) 416
BmrFI CCNGG 1 cut(s) 1383
BmrI ACTGGG 1 cut(s) 132
BmsI GCATC 4 cut(s) 161, 323, 876, 1045
BmuI ACTGGG 1 cut(s) 132
BoxI GACNNNNGTC 1 cut(s) 1236
BpiI GAAGAC 2 cut(s) 11, 667
BpmI CTGGAG 1 cut(s) 1284
Bpu1102I GCTNAGC 2 cut(s) 143, 639
Bpu14I TTCGAA 1 cut(s) 583
BpuEI CTTGAG 1 cut(s) 980
BpuMI CCSGG 1 cut(s) 1383
Bsa29I ATCGAT 1 cut(s) 1370
BsaAI YACGTR 1 cut(s) 362
BsaJI CCNNGG 4 cut(s) 69, 1062, 1216, 1479
BsaXI ACNNNNNCTCC 4 cut(s) 525, 555, 1257, 1287
Bsc4I CCNNNNNNNGG 4 cut(s) 492, 701, 1298, 1427
Bse1I ACTGG 3 cut(s) 127, 178, 1267
BseCI ATCGAT 1 cut(s) 1370
BseDI CCNNGG 4 cut(s) 69, 1062, 1216, 1479
BseGI GGATG 3 cut(s) 190, 744, 1036
BseLI CCNNNNNNNGG 4 cut(s) 492, 701, 1298, 1427
BseMII CTCAG 2 cut(s) 467, 630
BseNI ACTGG 3 cut(s) 127, 178, 1267
BseRI GAGGAG 1 cut(s) 1384
BseXI GCAGC 6 cut(s) 134, 244, 247, 275, 421, 1045
BsgI GTGCAG 3 cut(s) 37, 203, 420
BshFI GGCC 4 cut(s) 163, 309, 329, 1381
BshVI ATCGAT 1 cut(s) 1370
BsiSI CCGG 1 cut(s) 1383
BslFI GGGAC 4 cut(s) 350, 491, 926, 1244
BslI CCNNNNNNNGG 4 cut(s) 492, 701, 1298, 1427
BsmAI GTCTC 4 cut(s) 345, 456, 490, 1380
BsmBI CGTCTC 1 cut(s) 456
BsmFI GGGAC 4 cut(s) 350, 491, 926, 1244
BsmI GAATGC 1 cut(s) 1318
BsnI GGCC 4 cut(s) 163, 309, 329, 1381
Bsp119I TTCGAA 1 cut(s) 583
Bsp1286I GDGCHC 1 cut(s) 419
Bsp143I GATC 3 cut(s) 339, 1340, 1367
Bsp1720I GCTNAGC 2 cut(s) 143, 639
BspANI GGCC 4 cut(s) 163, 309, 329, 1381
BspCNI CTCAG 2 cut(s) 466, 631
BspDI ATCGAT 1 cut(s) 1370
BspHI TCATGA 1 cut(s) 336
BspLI GGNNCC 1 cut(s) 416
BspMAI CTGCAG 1 cut(s) 265
BspPI GGATC 1 cut(s) 1375
BspT104I TTCGAA 1 cut(s) 583
BsrI ACTGG 3 cut(s) 127, 178, 1267
BssECI CCNNGG 4 cut(s) 69, 1062, 1216, 1479
BssMI GATC 3 cut(s) 339, 1340, 1367
BssSI CACGAG 1 cut(s) 822
BssT1I CCWWGG 3 cut(s) 69, 1062, 1479
Bst2BI CACGAG 1 cut(s) 822
Bst6I CTCTTC 1 cut(s) 38
BstBAI YACGTR 1 cut(s) 362
BstBI TTCGAA 1 cut(s) 583
BstC8I GCNNGC 2 cut(s) 297, 327
BstDEI CTNAG 4 cut(s) 143, 453, 639, 1501
BstENI CCTNNNNNAGG 1 cut(s) 699
BstF5I GGATG 3 cut(s) 190, 744, 1036
BstHHI GCGC 1 cut(s) 152
BstKTI GATC 3 cut(s) 342, 1343, 1370
BstMAI GTCTC 4 cut(s) 345, 456, 490, 1380
BstMBI GATC 3 cut(s) 339, 1340, 1367
BstMWI GCNNNNNNNGC 6 cut(s) 24, 217, 263, 1055, 1064, 1355
BstNSI RCATGY 2 cut(s) 691, 913
BstPAI GACNNNNGTC 1 cut(s) 1236
BstSCI CCNGG 1 cut(s) 1381
BstSFI CTRYAG 1 cut(s) 261
BstV1I GCAGC 6 cut(s) 134, 244, 247, 275, 421, 1045
BstV2I GAAGAC 2 cut(s) 11, 667
BstX2I RGATCY 1 cut(s) 1340
BstXI CCANNNNNNTGG 2 cut(s) 1081, 1410
BstYI RGATCY 1 cut(s) 1340
Bsu15I ATCGAT 1 cut(s) 1370
BsuI GTATCC 2 cut(s) 90, 1487
BsuRI GGCC 4 cut(s) 163, 309, 329, 1381
BsuTUI ATCGAT 1 cut(s) 1370
BtrI CACGTC 1 cut(s) 797
BtsCI GGATG 3 cut(s) 190, 744, 1036
BtsI GCAGTG 1 cut(s) 1086
BtsIMutI CAGTG 2 cut(s) 120, 1086
Cac8I GCNNGC 2 cut(s) 297, 327
CaiI CAGNNNCTG 1 cut(s) 260
CciI TCATGA 1 cut(s) 336
CfoI GCGC 1 cut(s) 152
Cfr13I GGNCC 4 cut(s) 162, 308, 1178, 1380
ClaI ATCGAT 1 cut(s) 1370
CseI GACGC 1 cut(s) 569
Csp6I GTAC 4 cut(s) 66, 514, 1206, 1577
CviAII CATG 7 cut(s) 159, 337, 511, 688, 871, 910, 938
CviQI GTAC 4 cut(s) 66, 514, 1206, 1577
DdeI CTNAG 4 cut(s) 143, 453, 639, 1501
DpnI GATC 3 cut(s) 341, 1342, 1369
DpnII GATC 3 cut(s) 339, 1340, 1367
DraI TTTAAA 2 cut(s) 844, 930
DriI GACNNNNNGTC 1 cut(s) 503
Eam1104I CTCTTC 1 cut(s) 38
Eam1105I GACNNNNNGTC 1 cut(s) 503
EarI CTCTTC 1 cut(s) 38
Eco130I CCWWGG 3 cut(s) 69, 1062, 1479
Eco24I GRGCYC 1 cut(s) 419
Eco32I GATATC 1 cut(s) 475
Eco47I GGWCC 1 cut(s) 1178
Eco57I CTGAAG 1 cut(s) 1542
Eco72I CACGTG 1 cut(s) 362
EcoNI CCTNNNNNAGG 1 cut(s) 699
EcoO109I RGGNCCY 1 cut(s) 308
EcoRV GATATC 1 cut(s) 475
EcoT14I CCWWGG 3 cut(s) 69, 1062, 1479
EcoT38I GRGCYC 1 cut(s) 419
ErhI CCWWGG 3 cut(s) 69, 1062, 1479
Esp3I CGTCTC 1 cut(s) 456
FaeI CATG 7 cut(s) 162, 340, 514, 691, 874, 913, 941
FalI AAGNNNNNCTT 4 cut(s) 627, 659, 1327, 1359
FaqI GGGAC 4 cut(s) 350, 491, 926, 1244
FatI CATG 7 cut(s) 158, 336, 510, 687, 870, 909, 937
FbaI TGATCA 1 cut(s) 339
FblI GTMKAC 1 cut(s) 799
Fnu4HI GCNGC 6 cut(s) 148, 258, 261, 264, 435, 1059
FokI GGATG 3 cut(s) 177, 751, 1043
FriOI GRGCYC 1 cut(s) 419
Fsp4HI GCNGC 6 cut(s) 148, 258, 261, 264, 435, 1059
FspBI CTAG 8 cut(s) 57, 347, 803, 1070, 1202, 1304, 1359, 1448
FspI TGCGCA 1 cut(s) 151
GlaI GCGC 1 cut(s) 151
GluI GCNGC 6 cut(s) 148, 258, 261, 264, 435, 1059
GsuI CTGGAG 1 cut(s) 1284
HaeIII GGCC 4 cut(s) 163, 309, 329, 1381
HapII CCGG 1 cut(s) 1383
HgaI GACGC 1 cut(s) 569
HhaI GCGC 1 cut(s) 152
Hin1II CATG 7 cut(s) 162, 340, 514, 691, 874, 913, 941
Hin6I GCGC 1 cut(s) 150
HinP1I GCGC 1 cut(s) 150
HincII GTYRAC 1 cut(s) 1558
HindII GTYRAC 1 cut(s) 1558
HindIII AAGCTT 1 cut(s) 956
HinfI GANTC 6 cut(s) 7, 446, 585, 1158, 1417, 1444
HpaII CCGG 1 cut(s) 1383
HphI GGTGA 5 cut(s) 469, 542, 667, 1102, 1538
Hpy166II GTNNAC 3 cut(s) 685, 800, 1558
Hpy188III TCNNGA 5 cut(s) 269, 337, 520, 708, 1520
Hpy8I GTNNAC 3 cut(s) 685, 800, 1558
Hpy99I CGWCG 2 cut(s) 521, 563
HpyAV CCTTC 6 cut(s) 405, 530, 705, 1081, 1117, 1517
HpyCH4IV ACGT 3 cut(s) 361, 516, 796
HpyF10VI GCNNNNNNNGC 6 cut(s) 24, 217, 263, 1055, 1064, 1355
HpyF3I CTNAG 4 cut(s) 143, 453, 639, 1501
HpySE526I ACGT 3 cut(s) 361, 516, 796
Hsp92II CATG 7 cut(s) 162, 340, 514, 691, 874, 913, 941
HspAI GCGC 1 cut(s) 150
Ksp22I TGATCA 1 cut(s) 339
Kzo9I GATC 3 cut(s) 339, 1340, 1367
LmnI GCTCC 3 cut(s) 414, 1145, 1405
Lsp1109I GCAGC 6 cut(s) 134, 244, 247, 275, 421, 1045
LweI GCATC 4 cut(s) 161, 323, 876, 1045
MaeI CTAG 8 cut(s) 57, 347, 803, 1070, 1202, 1304, 1359, 1448
MaeII ACGT 3 cut(s) 361, 516, 796
MaeIII GTNAC 6 cut(s) 655, 690, 766, 805, 898, 1541
MalI GATC 3 cut(s) 341, 1342, 1369
MboI GATC 3 cut(s) 339, 1340, 1367
MboII GAAGA 6 cut(s) 16, 25, 206, 667, 1335, 1453
MfeI CAATTG 1 cut(s) 833
MflI RGATCY 1 cut(s) 1340
MhlI GDGCHC 1 cut(s) 419
MlyI GAGTC 1 cut(s) 440
MmeI TCCRAC 5 cut(s) 149, 473, 582, 903, 1031
MseI TTAA 8 cut(s) 87, 111, 183, 843, 885, 929, 1017, 1458
MslI CAYNNNNRTG 3 cut(s) 157, 1019, 1079
MspA1I CMGCKG 1 cut(s) 257
MspI CCGG 1 cut(s) 1383
MspR9I CCNGG 1 cut(s) 1383
MunI CAATTG 1 cut(s) 833
Mva1269I GAATGC 1 cut(s) 1318
MwoI GCNNNNNNNGC 6 cut(s) 24, 217, 263, 1055, 1064, 1355
NciI CCSGG 1 cut(s) 1383
NdeII GATC 3 cut(s) 339, 1340, 1367
NlaIII CATG 7 cut(s) 162, 340, 514, 691, 874, 913, 941
NlaIV GGNNCC 1 cut(s) 416
NmuCI GTSAC 4 cut(s) 655, 766, 805, 898
NsbI TGCGCA 1 cut(s) 151
NspI RCATGY 2 cut(s) 691, 913
NspV TTCGAA 1 cut(s) 583
PagI TCATGA 1 cut(s) 336
PciI ACATGT 1 cut(s) 687
PcsI WCGNNNNNNNCGW 1 cut(s) 820
PctI GAATGC 1 cut(s) 1318
PfeI GAWTC 4 cut(s) 585, 1158, 1417, 1444
PkrI GCNGC 6 cut(s) 149, 259, 262, 265, 436, 1060
PleI GAGTC 1 cut(s) 440
PmaCI CACGTG 1 cut(s) 362
PmlI CACGTG 1 cut(s) 362
PpsI GAGTC 1 cut(s) 440
Ppu21I YACGTR 1 cut(s) 362
PscI ACATGT 1 cut(s) 687
PshAI GACNNNNGTC 1 cut(s) 1236
PshBI ATTAAT 1 cut(s) 1017
PspCI CACGTG 1 cut(s) 362
PspN4I GGNNCC 1 cut(s) 416
PspPI GGNCC 4 cut(s) 162, 308, 1178, 1380
PstI CTGCAG 1 cut(s) 265
PstNI CAGNNNCTG 1 cut(s) 260
PsuI RGATCY 1 cut(s) 1340
PvuII CAGCTG 1 cut(s) 257
RsaI GTAC 4 cut(s) 67, 515, 1207, 1578
RsaNI GTAC 4 cut(s) 66, 514, 1206, 1577
RseI CAYNNNNRTG 3 cut(s) 157, 1019, 1079
SaqAI TTAA 8 cut(s) 87, 111, 183, 843, 885, 929, 1017, 1458
SatI GCNGC 6 cut(s) 148, 258, 261, 264, 435, 1059
Sau3AI GATC 3 cut(s) 339, 1340, 1367
Sau96I GGNCC 4 cut(s) 162, 308, 1178, 1380
SchI GAGTC 1 cut(s) 440
ScrFI CCNGG 1 cut(s) 1383
SduI GDGCHC 1 cut(s) 419
SfaNI GCATC 4 cut(s) 161, 323, 876, 1045
SfcI CTRYAG 1 cut(s) 261
SfuI TTCGAA 1 cut(s) 583
SinI GGWCC 1 cut(s) 1178
SmiMI CAYNNNNRTG 3 cut(s) 157, 1019, 1079
SmlI CTYRAG 1 cut(s) 959
SmoI CTYRAG 1 cut(s) 959
SpeI ACTAGT 3 cut(s) 56, 802, 1303
SspMI CTAG 8 cut(s) 57, 347, 803, 1070, 1202, 1304, 1359, 1448
StyD4I CCNGG 1 cut(s) 1381
StyI CCWWGG 3 cut(s) 69, 1062, 1479
TaiI ACGT 3 cut(s) 364, 519, 799
TaqI TCGA 6 cut(s) 155, 430, 519, 583, 709, 1370
TfiI GAWTC 4 cut(s) 585, 1158, 1417, 1444
Tru1I TTAA 8 cut(s) 87, 111, 183, 843, 885, 929, 1017, 1458
Tru9I TTAA 8 cut(s) 87, 111, 183, 843, 885, 929, 1017, 1458
TscAI CASTG 2 cut(s) 127, 1086
TseFI GTSAC 4 cut(s) 655, 766, 805, 898
TseI GCWGC 6 cut(s) 147, 257, 260, 263, 434, 1058
Tsp45I GTSAC 4 cut(s) 655, 766, 805, 898
TspDTI ATGAA 6 cut(s) 17, 325, 667, 687, 879, 1139
TspGWI ACGGA 2 cut(s) 917, 1314
TspRI CASTG 2 cut(s) 127, 1086
VpaK11BI GGWCC 1 cut(s) 1178
VspI ATTAAT 1 cut(s) 1017
XagI CCTNNNNNAGG 1 cut(s) 699
XapI RAATTY 4 cut(s) 711, 777, 989, 1024
XceI RCATGY 2 cut(s) 691, 913
XmiI GTMKAC 1 cut(s) 799
XspI CTAG 8 cut(s) 57, 347, 803, 1070, 1202, 1304, 1359, 1448
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.