Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0000051

Physical Location & Seq

Genomic Coordinates Forward (+)

9848337 .. 9854636

Gene Structure 6300 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g11331.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2640 bp

ATGGCCCTCTCAGATATTTATGCATCTCATCCATACTTCAAGACGAGGCTAGTACTACAAAAAAGGGACTCCAAACGAACTGTTGTTGGTGCGGCTGCCGCAGCTCTGGATCTGATAAAGAATGCAGAAGTTCTAGCAATATTAGGGCCTGAAACATCAATGCAGGCGAGCTTTATTGTTAGTTTGGGAGACGAAGCTCATGTGCCCATTTTATCATTCTCTGCATCAACACCTTATCTTAGTTCGCTCTGGAGCCCTTACTTTTTCAGAATTACTCAAACCGACTCATACCAAGTGAAAGCCATAAGTGGCATTGTTCAAAATTTTGGATGGAGACAAGTAGTACCAATCTACGTGGACAATATGTATGGGGAGGGAATCATACCTTTTCTCATTGATGCCTTGCAAGAGGTTGATGCTCATGTTCCTTACCGTAGTGTCATTCCCCCATCAGCTACCGATGACCAGATTTTAAAAGAGCTTTACAAATTAATGACAATGCAAACTAGAGTCTTCATTGTGCATATGAAATCGAATCTTTGCTCTAAGCTGTTTGCCAAGGTAAAAGAGATAGGTATGATGAGTAAAGGATATGTTTGGATCCTGACTGATGGGATATCTAATCGTTTAAATTCAATGGATTCTTCAGTCATAACTTCCATGGAAGGTGTGTTAGGTATTCAAACATTCATCCCAAGAACAACAAAACTTGAAGAATTCAAGCTCCGGTGGAAAGGGAAATTCCAACATGACAACCCAACCATTATTGATGTTGAATTGGATGTTTATTCACTTCAGGCTTATGATGCTGCTTTTGCACTAGCCCTGTCAATTGAAAATGTTGGGATCATTGCAAACTCTGAAATCCACAAGGGTGCTTCCTTCAACTCAACTGACCTTGATACTTATAAGGTCTCTCAGAATGGTCCTAAACTTGCTGAAGCATTATCAATTACTAGATTCAGAGGCATAGCTGGAGACTTCAAGCTTGTAGAAGGGCAACTTCAGTCATCAACTTTGACAATTGTCAATGTAAAAGATGAGGGAGAAAAACCAGTTGCATTTTGGACTCCGGGAAATCAAATGGTAGAAACGTTAAGTGACTCAACAAACACATGCTTCCTTTCAACTAATTCCAAGTGCAATATTGGGCCAATTAATTGGCCTGGAAATTCTCTCTCAGTTCCAAGGGGATGGGAGATACCAACAAATAGCAAGAAGTTGAAAATAGGAATTCCTGTTAAGATTGATTTTACTGAATTTGTTAAGATCACGGAAGATCCCAAGACAGGCAGAATGGATGTCACTGGTTTCTGTATTGATGTCTTTAATGCTGCACTGGAAGTATTACCTTATGCTCTTCCTTATGAGTTCATTCCCTTCGCAAACCCCGATGGCACCAGAGCTGGCAATTATAATGATTTGGTTTATCAAGTATATCTTGGGAATTTTGATGCCGTGGTCGGAGATTTAACAATTAGAGCGAATAGGTCCTTGTATGTGGACTTTACAATGCCATACACAGAATCTGGTGTTGTAATGGTGGTGCCAATCATAGACACAACGAGAAAGAATGCTTGGGTTTTCTTGAAGCCTTTGACTTGGGACCTGTGGCTTACAACATTTTGTTTCTTCCTATTTACTGGTTTTGTTGTTTGGGTTCTTGAACATCGTATTAATGAAGACTTTCGTGGTCCTCCGTCACATCAATTTGGGACTAGTGTCTGGTTTTCCTTCTCAACGATGGTTTTCTCACACAAAGAGAATGTGGTTAGCAACTTGGCTAGATTCGTGATGATTATATGGGTATTCGTTGTGCTTATATTGACACAAAGTTACACAGCTAATCTAGCATCATTATTAACAGTACAACAACTTAAGCCAACTGTAGCTGATATCAAGGATCTATTAAGGAAGGGGGATAATGTAGGGTACTCAAAGAATGCTTATGTTTATGGACTCTTGAAAGAAGTAGGTTTCAATGATTCAAATCTTAAAGGTTTTAGAACTATGGAAGAACTTGATTTCGAAGCTCTTTCGAAAGGGAGTGCAAATGGTGGCATTGCTGCTTTTGTTGATGAAACCCCCACTATGAAGCTTTTTATTGCAAAATACTGTTCTAAATATACCATGATTGGACCCATCTTCAAAACTGAAGGGTTCGGCTTTGTGTTTCCAAAGCGTTCCCCTCTTATCCCTGATGTTTCACAAGCAATCCTAAACATGACTGAAGGACAGAAGATGATGGACATTGAATCAAAATGGTTCAAGAAAGAGAGCAATTGTCAAAGCTCCAGCCAACTGGGTTCTAGCAACAGCCTCGGACTTGATAGCTTTTGGGGGTTATTCCTCATTGCTGGAGTGGCTTCAATATTTGCTCTCATCATATTTGTAGCTTCATTTCTTTACGAGAATGGAAACATATTGATGGATCCTGATTCAGAAGCCTTTTTACCGGAAAGGATTGGGGTCTTGTTCAAAATTTTCAATCAGAAAGACCTGAATTCTCGTACATTTAAAGGCAATCAAGCAAGAGTTGACGTAAACGTCTCACCAAATAACAACTGGCCAGAAAGTCCATTTAGCTACAGAAATCACAGTGATGGAAATTCAGAGCATCACACACCGCCTCCAGGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0007154 GO:0007165 GO:0008066 GO:0008150 GO:0008324 GO:0009719 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0043200 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046873 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

880

Amino Acids

98.19

Weight (kDa)

5.86

Isoelectric Point (pI)

24.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ANF_receptor	PF01094	2 - 294	6.1e-65	Receptor family ligand binding region
Peripla_BP_6	PF13458	9 - 228	5.2e-06	Periplasmic binding protein
Lig_chan-Glu_bd	PF10613	373 - 463	4.1e-08	Ligated ion channel L-glutamate- and glycine-binding site
SBP_bac_3	PF00497	382 - 704	1e-07	Bacterial extracellular solute-binding proteins, family 3
Lig_chan	PF00060	481 - 736	9.6e-42	Ligand-gated ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000051)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca	FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica	MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica	Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis	pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis	RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata	RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora	Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii	Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa	Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha	Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana	Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	909, 1416
AasI	GACNNNNNNGTC	1 cut(s)	2546
AccB1I	GGYRCC	2 cut(s)	1397, 1546
AciI	CCGC	3 cut(s)	92, 99, 2627
AclI	AACGTT	1 cut(s)	1094
AclWI	GGATC	8 cut(s)	117, 595, 608, 854, 1274, 1911, 2426, 2439
AcoI	YGGCCR	1 cut(s)	2567
AcuI	CTGAAG	6 cut(s)	630, 779, 960, 989, 2175, 2250
AfaI	GTAC	5 cut(s)	54, 345, 1869, 1934, 2512
AfiI	CCNNNNNNNGG	2 cut(s)	1289, 2633
AflII	CTTAAG	1 cut(s)	1877
AhlI	ACTAGT	1 cut(s)	1718
AjnI	CCWGG	2 cut(s)	1165, 2632
AjuI	GAANNNNNNNTTGG	2 cut(s)	1561, 1593
AleI	CACNNNNGTG	1 cut(s)	873
Alw26I	GTCTC	5 cut(s)	183, 328, 919, 972, 2554
AlwI	GGATC	8 cut(s)	117, 595, 608, 854, 1274, 1911, 2426, 2439
AlwNI	CAGNNNCTG	1 cut(s)	1529
AoxI	GGCC	5 cut(s)	3, 146, 1151, 1163, 2567
ApeKI	GCWGC	5 cut(s)	95, 101, 809, 1334, 2066
AseI	ATTAAT	3 cut(s)	491, 1158, 1677
Asp700I	GAANNNNTTC	1 cut(s)	1686
AspS9I	GGNCC	8 cut(s)	4, 146, 926, 1151, 1491, 1606, 1694, 2138
AsuC2I	CCSGG	1 cut(s)	1074
AsuHPI	GGTGA	1 cut(s)	2544
AsuII	TTCGAA	2 cut(s)	2028, 2039
AvaII	GGWCC	5 cut(s)	926, 1491, 1606, 1694, 2138
BaeGI	GKGCMC	1 cut(s)	207
BalI	TGGCCA	1 cut(s)	2569
BamHI	GGATCC	2 cut(s)	600, 2431
BanI	GGYRCC	2 cut(s)	1397, 1546
BanII	GRGCYC	1 cut(s)	257
BarI	GAAGNNNNNNTAC	2 cut(s)	2436, 2468
BbsI	GAAGAC	2 cut(s)	505, 1689
BbvI	GCAGC	5 cut(s)	82, 113, 796, 1321, 2053
BceAI	ACGGC	1 cut(s)	1442
BcgI	CGANNNNNNTGC	2 cut(s)	2302, 2336
BciT130I	CCWGG	2 cut(s)	1167, 2634
BcnI	CCSGG	1 cut(s)	1074
BcoDI	GTCTC	5 cut(s)	183, 328, 919, 972, 2554
BcuI	ACTAGT	1 cut(s)	1718
BfaI	CTAG	9 cut(s)	50, 134, 507, 821, 957, 1719, 1785, 1850, 2310
BfmI	CTRYAG	2 cut(s)	1887, 2587
BfrI	CTTAAG	1 cut(s)	1877
BisI	GCNGC	7 cut(s)	93, 96, 99, 102, 810, 1335, 2067
BlsI	GCNGC	7 cut(s)	94, 97, 100, 103, 811, 1336, 2068
BmcAI	AGTACT	1 cut(s)	54
Bme1390I	CCNGG	3 cut(s)	1074, 1167, 2634
Bme18I	GGWCC	5 cut(s)	926, 1491, 1606, 1694, 2138
BmgT120I	GGNCC	8 cut(s)	4, 146, 926, 1151, 1491, 1606, 1694, 2138
BmiI	GGNNCC	7 cut(s)	254, 602, 1399, 1548, 1607, 2140, 2433
BmrFI	CCNGG	3 cut(s)	1074, 1167, 2634
BmrI	ACTGGG	1 cut(s)	2312
BmsI	GCATC	8 cut(s)	32, 233, 388, 406, 796, 1444, 1862, 2626
BmuI	ACTGGG	1 cut(s)	2312
BoxI	GACNNNNGTC	2 cut(s)	1025, 1721
BpiI	GAAGAC	2 cut(s)	505, 1689
BpmI	CTGGAG	5 cut(s)	271, 996, 2278, 2379, 2616
Bpu14I	TTCGAA	2 cut(s)	2028, 2039
BpuMI	CCSGG	1 cut(s)	1074
BsaAI	YACGTR	1 cut(s)	355
BsaBI	GATNNNNATC	1 cut(s)	1989
BsaI	GGTCTC	1 cut(s)	919
BsaJI	CCNNGG	5 cut(s)	558, 660, 1187, 1458, 2320
BsaWI	WCCGGW	2 cut(s)	726, 2455
BsaXI	ACNNNNNCTCC	1 cut(s)	2614
Bsc4I	CCNNNNNNNGG	2 cut(s)	1289, 2633
Bse1I	ACTGG	6 cut(s)	1055, 1312, 1344, 1648, 2307, 2570
Bse3DI	GCAATG	3 cut(s)	849, 2061, 2352
Bse8I	GATNNNNATC	1 cut(s)	1989
BseBI	CCWGG	2 cut(s)	1167, 2634
BseDI	CCNNGG	5 cut(s)	558, 660, 1187, 1458, 2320
BseGI	GGATG	6 cut(s)	28, 335, 690, 787, 1199, 1306
BseJI	GATNNNNATC	1 cut(s)	1989
BseLI	CCNNNNNNNGG	2 cut(s)	1289, 2633
BseMI	GCAATG	3 cut(s)	849, 2061, 2352
BseMII	CTCAG	3 cut(s)	24, 932, 1194
BseNI	ACTGG	6 cut(s)	1055, 1312, 1344, 1648, 2307, 2570
BseSI	GKGCMC	1 cut(s)	207
BseXI	GCAGC	5 cut(s)	82, 113, 796, 1321, 2053
BsgI	GTGCAG	1 cut(s)	1320
BshFI	GGCC	5 cut(s)	5, 148, 1153, 1165, 2569
BshNI	GGYRCC	2 cut(s)	1397, 1546
BsiSI	CCGG	3 cut(s)	727, 1073, 2456
BslFI	GGGAC	3 cut(s)	80, 1619, 1729
BslI	CCNNNNNNNGG	2 cut(s)	1289, 2633
BsmAI	GTCTC	5 cut(s)	183, 328, 919, 972, 2554
BsmBI	CGTCTC	2 cut(s)	183, 2554
BsmFI	GGGAC	3 cut(s)	80, 1619, 1729
BsmI	GAATGC	3 cut(s)	127, 1579, 1948
BsnI	GGCC	5 cut(s)	5, 148, 1153, 1165, 2569
Bso31I	GGTCTC	1 cut(s)	919
Bsp119I	TTCGAA	2 cut(s)	2028, 2039
Bsp1286I	GDGCHC	2 cut(s)	207, 257
Bsp143I	GATC	7 cut(s)	109, 600, 846, 1269, 1279, 1903, 2431
Bsp19I	CCATGG	1 cut(s)	660
BspACI	CCGC	3 cut(s)	92, 99, 2627
BspANI	GGCC	5 cut(s)	5, 148, 1153, 1165, 2569
BspCNI	CTCAG	3 cut(s)	23, 931, 1193
BspLI	GGNNCC	7 cut(s)	254, 602, 1399, 1548, 1607, 2140, 2433
BspPI	GGATC	8 cut(s)	117, 595, 608, 854, 1274, 1911, 2426, 2439
BspQI	GCTCTTC	1 cut(s)	1365
BspT104I	TTCGAA	2 cut(s)	2028, 2039
BspT107I	GGYRCC	2 cut(s)	1397, 1546
BspTI	CTTAAG	1 cut(s)	1877
BspTNI	GGTCTC	1 cut(s)	919
BsrDI	GCAATG	3 cut(s)	849, 2061, 2352
BsrI	ACTGG	6 cut(s)	1055, 1312, 1344, 1648, 2307, 2570
BssECI	CCNNGG	5 cut(s)	558, 660, 1187, 1458, 2320
BssMI	GATC	7 cut(s)	109, 600, 846, 1269, 1279, 1903, 2431
BssT1I	CCWWGG	3 cut(s)	558, 660, 1187
Bst2UI	CCWGG	2 cut(s)	1167, 2634
Bst4CI	ACNGT	6 cut(s)	82, 434, 1867, 1888, 2117, 2600
Bst6I	CTCTTC	1 cut(s)	1365
BstAFI	CTTAAG	1 cut(s)	1877
BstBAI	YACGTR	1 cut(s)	355
BstBI	TTCGAA	2 cut(s)	2028, 2039
BstC8I	GCNNGC	3 cut(s)	165, 169, 1408
BstDEI	CTNAG	5 cut(s)	10, 239, 546, 918, 1180
BstDSI	CCRYGG	2 cut(s)	660, 1458
BstF5I	GGATG	6 cut(s)	28, 335, 690, 787, 1199, 1306
BstKTI	GATC	7 cut(s)	112, 603, 849, 1272, 1282, 1906, 2434
BstMAI	GTCTC	5 cut(s)	183, 328, 919, 972, 2554
BstMBI	GATC	7 cut(s)	109, 600, 846, 1269, 1279, 1903, 2431
BstMWI	GCNNNNNNNGC	6 cut(s)	98, 101, 806, 815, 1850, 2363
BstNI	CCWGG	2 cut(s)	1167, 2634
BstNSI	RCATGY	1 cut(s)	1119
BstPAI	GACNNNNGTC	2 cut(s)	1025, 1721
BstSCI	CCNGG	3 cut(s)	1072, 1165, 2632
BstSFI	CTRYAG	2 cut(s)	1887, 2587
BstSLI	GKGCMC	1 cut(s)	207
BstV1I	GCAGC	5 cut(s)	82, 113, 796, 1321, 2053
BstV2I	GAAGAC	2 cut(s)	505, 1689
BstX2I	RGATCY	5 cut(s)	109, 600, 1279, 1903, 2431
BstXI	CCANNNNNNTGG	3 cut(s)	1161, 1194, 2302
BstYI	RGATCY	5 cut(s)	109, 600, 1279, 1903, 2431
BsuRI	GGCC	5 cut(s)	5, 148, 1153, 1165, 2569
BtgI	CCRYGG	2 cut(s)	660, 1458
BtsCI	GGATG	6 cut(s)	28, 335, 690, 787, 1199, 1306
BtsIMutI	CAGTG	3 cut(s)	1305, 1337, 2605
Cac8I	GCNNGC	3 cut(s)	165, 169, 1408
CaiI	CAGNNNCTG	1 cut(s)	1529
Cfr13I	GGNCC	8 cut(s)	4, 146, 926, 1151, 1491, 1606, 1694, 2138
Csp6I	GTAC	5 cut(s)	53, 344, 1868, 1933, 2511
CspCI	CAANNNNNGTGG	2 cut(s)	336, 371
CviAII	CATG	7 cut(s)	200, 422, 661, 749, 1116, 2131, 2224
CviQI	GTAC	5 cut(s)	53, 344, 1868, 1933, 2511
DdeI	CTNAG	5 cut(s)	10, 239, 546, 918, 1180
DpnI	GATC	7 cut(s)	111, 602, 848, 1271, 1281, 1905, 2433
DpnII	GATC	7 cut(s)	109, 600, 846, 1269, 1279, 1903, 2431
DraI	TTTAAA	3 cut(s)	474, 630, 2518
DrdI	GACNNNNNNGTC	1 cut(s)	2546
DseDI	GACNNNNNNGTC	1 cut(s)	2546
EaeI	YGGCCR	1 cut(s)	2567
Eam1104I	CTCTTC	1 cut(s)	1365
EarI	CTCTTC	1 cut(s)	1365
Eco130I	CCWWGG	3 cut(s)	558, 660, 1187
Eco24I	GRGCYC	1 cut(s)	257
Eco31I	GGTCTC	1 cut(s)	919
Eco32I	GATATC	2 cut(s)	618, 1897
Eco47I	GGWCC	5 cut(s)	926, 1491, 1606, 1694, 2138
Eco57I	CTGAAG	6 cut(s)	630, 779, 960, 989, 2175, 2250
EcoO109I	RGGNCCY	3 cut(s)	146, 1491, 1606
EcoRI	GAATTC	3 cut(s)	716, 1233, 2503
EcoRII	CCWGG	2 cut(s)	1165, 2632
EcoRV	GATATC	2 cut(s)	618, 1897
EcoT14I	CCWWGG	3 cut(s)	558, 660, 1187
EcoT22I	ATGCAT	1 cut(s)	25
EcoT38I	GRGCYC	1 cut(s)	257
ErhI	CCWWGG	3 cut(s)	558, 660, 1187
Esp3I	CGTCTC	2 cut(s)	183, 2554
FaeI	CATG	7 cut(s)	203, 425, 664, 752, 1119, 2134, 2227
FalI	AAGNNNNNCTT	4 cut(s)	987, 1019, 1425, 1457
FaqI	GGGAC	3 cut(s)	80, 1619, 1729
FatI	CATG	7 cut(s)	199, 421, 660, 748, 1115, 2130, 2223
FauNDI	CATATG	1 cut(s)	525
Fnu4HI	GCNGC	7 cut(s)	93, 96, 99, 102, 810, 1335, 2067
FokI	GGATG	6 cut(s)	15, 342, 677, 794, 1206, 1313
FriOI	GRGCYC	1 cut(s)	257
Fsp4HI	GCNGC	7 cut(s)	93, 96, 99, 102, 810, 1335, 2067
FspBI	CTAG	9 cut(s)	50, 134, 507, 821, 957, 1719, 1785, 1850, 2310
GluI	GCNGC	7 cut(s)	93, 96, 99, 102, 810, 1335, 2067
GsuI	CTGGAG	5 cut(s)	271, 996, 2278, 2379, 2616
HaeIII	GGCC	5 cut(s)	5, 148, 1153, 1165, 2569
HapII	CCGG	3 cut(s)	727, 1073, 2456
Hin1II	CATG	7 cut(s)	203, 425, 664, 752, 1119, 2134, 2227
HincII	GTYRAC	1 cut(s)	2539
HindII	GTYRAC	1 cut(s)	2539
HindIII	AAGCTT	2 cut(s)	986, 2096
HpaII	CCGG	3 cut(s)	727, 1073, 2456
HphI	GGTGA	1 cut(s)	2544
Hpy166II	GTNNAC	4 cut(s)	358, 1504, 2539, 2545
Hpy8I	GTNNAC	4 cut(s)	358, 1504, 2539, 2545
HpyAV	CCTTC	8 cut(s)	659, 892, 989, 1390, 1744, 1909, 2150, 2225
HpyCH4III	ACNGT	6 cut(s)	82, 434, 1867, 1888, 2117, 2600
HpyCH4IV	ACGT	4 cut(s)	354, 1094, 2541, 2547
HpyF10VI	GCNNNNNNNGC	6 cut(s)	98, 101, 806, 815, 1850, 2363
HpyF3I	CTNAG	5 cut(s)	10, 239, 546, 918, 1180
HpySE526I	ACGT	4 cut(s)	354, 1094, 2541, 2547
Hsp92II	CATG	7 cut(s)	203, 425, 664, 752, 1119, 2134, 2227
Kzo9I	GATC	7 cut(s)	109, 600, 846, 1269, 1279, 1903, 2431
LguI	GCTCTTC	1 cut(s)	1365
LmnI	GCTCC	3 cut(s)	252, 729, 2297
Lsp1109I	GCAGC	5 cut(s)	82, 113, 796, 1321, 2053
LweI	GCATC	8 cut(s)	32, 233, 388, 406, 796, 1444, 1862, 2626
MaeI	CTAG	9 cut(s)	50, 134, 507, 821, 957, 1719, 1785, 1850, 2310
MaeII	ACGT	4 cut(s)	354, 1094, 2541, 2547
MaeIII	GTNAC	4 cut(s)	1100, 1303, 1701, 1835
MalI	GATC	7 cut(s)	111, 602, 848, 1271, 1281, 1905, 2433
MboI	GATC	7 cut(s)	109, 600, 846, 1269, 1279, 1903, 2431
MfeI	CAATTG	3 cut(s)	831, 1023, 2281
MflI	RGATCY	5 cut(s)	109, 600, 1279, 1903, 2431
MhlI	GDGCHC	2 cut(s)	207, 257
MlsI	TGGCCA	1 cut(s)	2569
MluNI	TGGCCA	1 cut(s)	2569
MlyI	GAGTC	6 cut(s)	62, 278, 519, 1063, 1097, 1953
MmeI	TCCRAC	2 cut(s)	769, 1444
Mox20I	TGGCCA	1 cut(s)	2569
Mph1103I	ATGCAT	1 cut(s)	25
MroXI	GAANNNNTTC	1 cut(s)	1686
MscI	TGGCCA	1 cut(s)	2569
MslI	CAYNNNNRTG	3 cut(s)	873, 2426, 2601
Msp20I	TGGCCA	1 cut(s)	2569
MspCI	CTTAAG	1 cut(s)	1877
MspI	CCGG	3 cut(s)	727, 1073, 2456
MspR9I	CCNGG	3 cut(s)	1074, 1167, 2634
MunI	CAATTG	3 cut(s)	831, 1023, 2281
Mva1269I	GAATGC	3 cut(s)	127, 1579, 1948
MvaI	CCWGG	2 cut(s)	1167, 2634
MwoI	GCNNNNNNNGC	6 cut(s)	98, 101, 806, 815, 1850, 2363
NciI	CCSGG	1 cut(s)	1074
NcoI	CCATGG	1 cut(s)	660
NdeI	CATATG	1 cut(s)	525
NdeII	GATC	7 cut(s)	109, 600, 846, 1269, 1279, 1903, 2431
NlaIII	CATG	7 cut(s)	203, 425, 664, 752, 1119, 2134, 2227
NlaIV	GGNNCC	7 cut(s)	254, 602, 1399, 1548, 1607, 2140, 2433
NmuCI	GTSAC	3 cut(s)	1100, 1303, 1701
NsiI	ATGCAT	1 cut(s)	25
NspI	RCATGY	1 cut(s)	1119
NspV	TTCGAA	2 cut(s)	2028, 2039
OliI	CACNNNNGTG	1 cut(s)	873
PciSI	GCTCTTC	1 cut(s)	1365
PcsI	WCGNNNNNNNCGW	1 cut(s)	1389
PctI	GAATGC	3 cut(s)	127, 1579, 1948
PdmI	GAANNNNTTC	1 cut(s)	1686
PfeI	GAWTC	9 cut(s)	378, 535, 641, 960, 1526, 1788, 1985, 2255, 2438
PfoI	TCCNGGA	1 cut(s)	1072
PkrI	GCNGC	7 cut(s)	94, 97, 100, 103, 811, 1336, 2068
PleI	GAGTC	6 cut(s)	62, 278, 518, 1063, 1097, 1953
PpsI	GAGTC	6 cut(s)	62, 278, 518, 1063, 1097, 1953
Ppu21I	YACGTR	1 cut(s)	355
PpuMI	RGGWCCY	2 cut(s)	1491, 1606
PshAI	GACNNNNGTC	2 cut(s)	1025, 1721
PshBI	ATTAAT	3 cut(s)	491, 1158, 1677
PsiI	TTATAA	2 cut(s)	909, 1416
Psp1406I	AACGTT	1 cut(s)	1094
Psp5II	RGGWCCY	2 cut(s)	1491, 1606
Psp6I	CCWGG	2 cut(s)	1165, 2632
PspGI	CCWGG	2 cut(s)	1165, 2632
PspN4I	GGNNCC	7 cut(s)	254, 602, 1399, 1548, 1607, 2140, 2433
PspPI	GGNCC	8 cut(s)	4, 146, 926, 1151, 1491, 1606, 1694, 2138
PspPPI	RGGWCCY	2 cut(s)	1491, 1606
PstNI	CAGNNNCTG	1 cut(s)	1529
PsuI	RGATCY	5 cut(s)	109, 600, 1279, 1903, 2431
RsaI	GTAC	5 cut(s)	54, 345, 1869, 1934, 2512
RsaNI	GTAC	5 cut(s)	53, 344, 1868, 1933, 2511
RseI	CAYNNNNRTG	3 cut(s)	873, 2426, 2601
SapI	GCTCTTC	1 cut(s)	1365
SatI	GCNGC	7 cut(s)	93, 96, 99, 102, 810, 1335, 2067
Sau3AI	GATC	7 cut(s)	109, 600, 846, 1269, 1279, 1903, 2431
Sau96I	GGNCC	8 cut(s)	4, 146, 926, 1151, 1491, 1606, 1694, 2138
ScaI	AGTACT	1 cut(s)	54
SchI	GAGTC	6 cut(s)	62, 278, 519, 1063, 1097, 1953
ScrFI	CCNGG	3 cut(s)	1074, 1167, 2634
SduI	GDGCHC	2 cut(s)	207, 257
SfaNI	GCATC	8 cut(s)	32, 233, 388, 406, 796, 1444, 1862, 2626
SfcI	CTRYAG	2 cut(s)	1887, 2587
SfuI	TTCGAA	2 cut(s)	2028, 2039
SinI	GGWCC	5 cut(s)	926, 1491, 1606, 1694, 2138
SmiMI	CAYNNNNRTG	3 cut(s)	873, 2426, 2601
SmlI	CTYRAG	1 cut(s)	1877
SmoI	CTYRAG	1 cut(s)	1877
SpeI	ACTAGT	1 cut(s)	1718
SsiI	CCGC	3 cut(s)	92, 99, 2627
SspI	AATATT	3 cut(s)	141, 1147, 2373
SspMI	CTAG	9 cut(s)	50, 134, 507, 821, 957, 1719, 1785, 1850, 2310
StyD4I	CCNGG	3 cut(s)	1072, 1165, 2632
StyI	CCWWGG	3 cut(s)	558, 660, 1187
TaaI	ACNGT	6 cut(s)	82, 434, 1867, 1888, 2117, 2600
TaiI	ACGT	4 cut(s)	357, 1097, 2544, 2550
TaqI	TCGA	3 cut(s)	533, 2028, 2039
TatI	WGTACW	2 cut(s)	52, 1867
TauI	GCSGC	2 cut(s)	95, 101
TfiI	GAWTC	9 cut(s)	378, 535, 641, 960, 1526, 1788, 1985, 2255, 2438
TscAI	CASTG	3 cut(s)	1312, 1344, 2605
TseFI	GTSAC	3 cut(s)	1100, 1303, 1701
TseI	GCWGC	5 cut(s)	95, 101, 809, 1334, 2066
Tsp45I	GTSAC	3 cut(s)	1100, 1303, 1701
TspDTI	ATGAA	8 cut(s)	505, 542, 679, 1363, 1695, 2094, 2108, 2388
TspGWI	ACGGA	2 cut(s)	1289, 1689
TspRI	CASTG	3 cut(s)	1312, 1344, 2605
Vha464I	CTTAAG	1 cut(s)	1877
VpaK11BI	GGWCC	5 cut(s)	926, 1491, 1606, 1694, 2138
VspI	ATTAAT	3 cut(s)	491, 1158, 1677
XceI	RCATGY	1 cut(s)	1119
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1062, 2562
XmnI	GAANNNNTTC	1 cut(s)	1686
XspI	CTAG	9 cut(s)	50, 134, 507, 821, 957, 1719, 1785, 1850, 2310
ZrmI	AGTACT	1 cut(s)	54
Zsp2I	ATGCAT	1 cut(s)	25

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.