Rh5CG164400

Glutamate receptor

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
Physical Location & Seq
Forward (+)
15308894 .. 15314119
5226 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG164400.1

Sequence Viewer

Length: 2226 bp
ATGGTCGCCGCCATGGGAGCTGAAAGCACAACAACAATCCCAGTGAACGTGGGAGTTGTCGTAGACCTTGATGAACCGAGTGGGAAAATGTATTTGAGTTGCATCGAAATGGCGCTCTCGGATTTCTATGCTTCCCATGCTCACTACAAGACTAGGCTCGTTTTGAACACCAGGAATTCCAATGGTGATGTGGTTGGTGCAGCTGCCGCAGCTTTAGATCTGATAAAGAATGTAGAAGTGAAAGCCATCCTAGGGCCGGTGTCGTCGATGCAGGCAAGTTTCGTTGTGAATCTAGGAGAGCAAGCTCATGTACCCATCATATCATTTTCTGCAACAAGCCCTTCTCTTACTTCACTTCAGAGTTCCTATTTTTTTCGGTTTGCACAAAATGACTTGAACCAAGTAAAAGCTATAAGTAGTATTGTTCAAAACTTTGGATGGAGACGAGTTGTGCCCATTTACGTAGACAATATGTACGGGGAAGGAGTCATACCTTTTCTAATTGATGCCTTGCAAGAGGTGGATGCTCATATCCCCCACAGAAGTTTAATTCATGAATTAGCCACTGATGACCAAATTGAAAAAGAGCTTTACAAGTTGATGACGATGCAGACTCGAGTCTTCATTGTGCATATGATGCCTAATCTTTCATCTCGGCTATTTGCTAAGGCAAAGGAGATGGGAATGATGAGTGAGGGTTATGTTTGGATCACAACTAATGGTATTGGAAATAATTTACGATCTATGGCTTCCGTCCTTGATTTGATGCAAGGCTTGTTAGGTGTAGAAAGTTATATTCCAAGGACATTGAAGCTTAGACAATTCATATCAAGGTGGAAAAGGAAATTCCAACAAGACAATCCAAAAATCATTGATGTTCAATTAGATTTTTTTGGATTGCGGGCATATGATGCTGCTTTTGCAGTAGCCATGGCATTTGAGAAAGTTGCCAATGTAAGTTTCAAATTCCAAAAGAGGAATGCTTCTTCCTTCAACTCAACAGATCTTGATACTTTTGAGGTCTCTCATTATGGTTCAAAACTTTCTCATGCATTATCCATTATTAATTTCAAAGGTATGGCTGGAAACTTCAATCTTGTTGATAGGCAACTTAATGTATCAACTTTTAAGATTGTTAATGTGAATGGGGATGCACCAAGAACAGTTGGATATTGGACACCAGAAAATGGAAAGGTAGTAAAGCGGTTGAATTCGACAAGAAGTAGAATATCAACTTCCATGTGCGATCTTCGACCTATTATATGGCCTGGAGAGTCATTATCGGTTCCTAAAGGGTGGGAGATCCCGACAAACGGTACGAAGTTAAGAATAGGAGTTCCTGTGAAGGAAGGTTTTCTAGAGTTTCTTAAAGTAACCAGATATCCAAGCACTAATACAGTGGATGTCACTGGGTTCGTTATTGACGTGTTTAAGGCCGTATTGGAGATCTTACCATATGCACTTCCTTATGAATTTATTCCCTTTGCAAAGGCTAATGGAAGCAGCGCTGGCACATACAATGATTTGGTGTATCAAGTATATATTGGGAATTTTGATGCTGTGCTTGGAGATGTAACGATTAGAGCAAATAGGTCATTGTATGTTGGCTTTACTATGCCATATACCGCAGTTGATGTAGTGATGGTTGTGCCAATACAAGACAAGAGGACCAAAAGTGCATGGGTTTTCTTGAAGCCTTTGACATGGGACCTTTGGATGACAACTTTATGTTTTTTCATCTTTATTGGTTTTGTTATTTGGGTGCTTGAACATCGAACAAATGACGATTTTCGTGGCTCTCCCTCCCATCAAATTGGCACAAGCTTCTGGTTCTCTTTCTCAACCATGGTTTTCTCACAAAGGGAGAGAGTGGTTAATAACTTGGCAAGATTTGTGATGATTATCTGGATATTCGTTGTGCTAATAGTGACACAGAGCTATACAGCTAGTCTAGCATCACTATTGACAGTCCAACAACTCCAACCAACTATTACCGATATAAATGATCTTTTGAGGAATTCAGAAAATGTGGGCTATTTGGCGAGTTCTTATATTTATGGTCTCCTGAGACAAAAAGGTTTTCATGATTCCAAGCTTAAAGAATATGGAGATATGGAAGAAATAGATAAAGCTCTTTCAAAGGGGAGTGCAAACGGTGGTATTGCTGCTATTGTTCATGAAACCCCCTATATGAAGCTTTTTGTTGCAAAATATTGTTCCAAGTAA

Protein Analysis

741

Amino Acids

83.03

Weight (kDa)

8.76

Isoelectric Point (pI)

30.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peripla_BP_6 PF13458 14 - 317 3.7e-20 Periplasmic binding protein
ANF_receptor PF01094 34 - 384 1.7e-78 Receptor family ligand binding region
Lig_chan PF00060 568 - 674 1.5e-34 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1187
AccI GTMKAC 2 cut(s) 63, 465
AciI CCGC 5 cut(s) 9, 207, 901, 1204, 1626
AclWI GGATC 2 cut(s) 716, 1297
AcsI RAATTY 7 cut(s) 175, 845, 965, 1210, 1472, 1549, 2017
AcuI CTGAAG 1 cut(s) 341
AfaI GTAC 3 cut(s) 312, 476, 1318
AfeI AGCGCT 1 cut(s) 1507
AfiI CCNNNNNNNGG 4 cut(s) 252, 256, 1187, 1313
AflIII ACRYGT 1 cut(s) 1425
AjiI CACGTC 1 cut(s) 1426
AjnI CCWGG 2 cut(s) 170, 1267
AjuI GAANNNNNNNTTGG 2 cut(s) 944, 976
Alw26I GTCTC 4 cut(s) 436, 1027, 2062, 2066
AlwI GGATC 2 cut(s) 716, 1297
Ama87I CYCGRG 1 cut(s) 615
Aor51HI AGCGCT 1 cut(s) 1507
AoxI GGCC 3 cut(s) 254, 1265, 1434
ApeKI GCWGC 6 cut(s) 200, 203, 209, 914, 1503, 2165
ApoI RAATTY 7 cut(s) 175, 845, 965, 1210, 1472, 1549, 2017
AseI ATTAAT 1 cut(s) 1065
Asp700I GAANNNNTTC 2 cut(s) 1353, 1476
AspA2I CCTAGG 1 cut(s) 250
AspLEI GCGC 2 cut(s) 115, 1508
AspS9I GGNCC 3 cut(s) 254, 1668, 1708
AsuHPI GGTGA 1 cut(s) 197
AvaI CYCGRG 1 cut(s) 615
AvaII GGWCC 2 cut(s) 1668, 1708
AvrII CCTAGG 1 cut(s) 250
BaeGI GKGCMC 1 cut(s) 456
BarI GAAGNNNNNNTAC 2 cut(s) 474, 506
BbsI GAAGAC 1 cut(s) 613
BbvI GCAGC 6 cut(s) 190, 212, 221, 901, 1515, 2152
BccI CCATC 6 cut(s) 254, 323, 432, 673, 1636, 1815
BceAI ACGGC 1 cut(s) 1421
BciT130I CCWGG 2 cut(s) 172, 1269
BcoDI GTCTC 4 cut(s) 436, 1027, 2062, 2066
BfaI CTAG 6 cut(s) 153, 251, 293, 1358, 1947, 1952
BfoI RGCGCY 2 cut(s) 116, 1509
BglII AGATCT 3 cut(s) 217, 1003, 1446
BisI GCNGC 8 cut(s) 9, 201, 204, 207, 210, 915, 1504, 2166
BlnI CCTAGG 1 cut(s) 250
BlsI GCNGC 8 cut(s) 10, 202, 205, 208, 211, 916, 1505, 2167
Bme1390I CCNGG 2 cut(s) 172, 1269
Bme18I GGWCC 2 cut(s) 1668, 1708
BmeT110I CYCGRG 1 cut(s) 615
BmgBI CACGTC 1 cut(s) 1426
BmgT120I GGNCC 3 cut(s) 254, 1668, 1708
BmiI GGNNCC 2 cut(s) 1287, 1709
BmrFI CCNGG 2 cut(s) 172, 1269
BmrI ACTGGG 2 cut(s) 35, 1419
BmuI ACTGGG 2 cut(s) 35, 1419
BoxI GACNNNNGTC 1 cut(s) 617
BpiI GAAGAC 1 cut(s) 613
BpmI CTGGAG 1 cut(s) 1290
Bpu10I CCTNAGC 1 cut(s) 666
BsaAI YACGTR 1 cut(s) 463
BsaBI GATNNNNATC 1 cut(s) 1901
BsaI GGTCTC 2 cut(s) 1027, 2066
BsaJI CCNNGG 5 cut(s) 12, 250, 800, 930, 1845
BsaXI ACNNNNNCTCC 4 cut(s) 45, 75, 1326, 1356
Bsc4I CCNNNNNNNGG 4 cut(s) 252, 256, 1187, 1313
Bse118I RCCGGY 1 cut(s) 256
Bse1I ACTGG 2 cut(s) 41, 1414
Bse8I GATNNNNATC 1 cut(s) 1901
BseBI CCWGG 2 cut(s) 172, 1269
BseDI CCNNGG 5 cut(s) 12, 250, 800, 930, 1845
BseGI GGATG 6 cut(s) 246, 443, 529, 1156, 1408, 1722
BseJI GATNNNNATC 1 cut(s) 1901
BseLI CCNNNNNNNGG 4 cut(s) 252, 256, 1187, 1313
BseMII CTCAG 1 cut(s) 2057
BseNI ACTGG 2 cut(s) 41, 1414
BseSI GKGCMC 1 cut(s) 456
BseXI GCAGC 6 cut(s) 190, 212, 221, 901, 1515, 2152
BsgI GTGCAG 1 cut(s) 219
BshFI GGCC 3 cut(s) 256, 1267, 1436
BsiHKCI CYCGRG 1 cut(s) 615
BsiSI CCGG 1 cut(s) 257
BslFI GGGAC 1 cut(s) 1721
BslI CCNNNNNNNGG 4 cut(s) 252, 256, 1187, 1313
BsmAI GTCTC 4 cut(s) 436, 1027, 2062, 2066
BsmBI CGTCTC 1 cut(s) 436
BsmFI GGGAC 1 cut(s) 1721
BsmI GAATGC 1 cut(s) 985
BsnI GGCC 3 cut(s) 256, 1267, 1436
Bso31I GGTCTC 2 cut(s) 1027, 2066
BsoBI CYCGRG 1 cut(s) 615
Bsp1286I GDGCHC 1 cut(s) 456
Bsp143I GATC 8 cut(s) 217, 708, 740, 1003, 1246, 1302, 1446, 2005
Bsp19I CCATGG 3 cut(s) 12, 930, 1845
BspACI CCGC 5 cut(s) 9, 207, 901, 1204, 1626
BspANI GGCC 3 cut(s) 256, 1267, 1436
BspCNI CTCAG 1 cut(s) 2058
BspHI TCATGA 3 cut(s) 553, 2083, 2176
BspLI GGNNCC 2 cut(s) 1287, 1709
BspPI GGATC 2 cut(s) 716, 1297
BspTNI GGTCTC 2 cut(s) 1027, 2066
BsrFI RCCGGY 1 cut(s) 256
BsrI ACTGG 2 cut(s) 41, 1414
BssAI RCCGGY 1 cut(s) 256
BssECI CCNNGG 5 cut(s) 12, 250, 800, 930, 1845
BssMI GATC 8 cut(s) 217, 708, 740, 1003, 1246, 1302, 1446, 2005
BssT1I CCWWGG 5 cut(s) 12, 250, 800, 930, 1845
Bst2UI CCWGG 2 cut(s) 172, 1269
Bst4CI ACNGT 5 cut(s) 1165, 1316, 1399, 1969, 2156
BstAPI GCANNNNNTGC 2 cut(s) 637, 911
BstBAI YACGTR 1 cut(s) 463
BstC8I GCNNGC 4 cut(s) 273, 303, 903, 1510
BstDEI CTNAG 3 cut(s) 666, 815, 2066
BstDSI CCRYGG 3 cut(s) 12, 930, 1845
BstF5I GGATG 6 cut(s) 246, 443, 529, 1156, 1408, 1722
BstH2I RGCGCY 2 cut(s) 116, 1509
BstHHI GCGC 2 cut(s) 115, 1508
BstKTI GATC 8 cut(s) 220, 711, 743, 1006, 1249, 1305, 1449, 2008
BstMAI GTCTC 4 cut(s) 436, 1027, 2062, 2066
BstMBI GATC 8 cut(s) 217, 708, 740, 1003, 1246, 1302, 1446, 2005
BstMWI GCNNNNNNNGC 9 cut(s) 17, 137, 206, 209, 637, 911, 920, 1509, 1952
BstNI CCWGG 2 cut(s) 172, 1269
BstPAI GACNNNNGTC 1 cut(s) 617
BstSCI CCNGG 2 cut(s) 170, 1267
BstSLI GKGCMC 1 cut(s) 456
BstSNI TACGTA 1 cut(s) 463
BstV1I GCAGC 6 cut(s) 190, 212, 221, 901, 1515, 2152
BstV2I GAAGAC 1 cut(s) 613
BstX2I RGATCY 4 cut(s) 217, 1003, 1302, 1446
BstXI CCANNNNNNTGG 1 cut(s) 1814
BstYI RGATCY 4 cut(s) 217, 1003, 1302, 1446
BsuRI GGCC 3 cut(s) 256, 1267, 1436
BtgI CCRYGG 3 cut(s) 12, 930, 1845
BtrI CACGTC 1 cut(s) 1426
BtsCI GGATG 6 cut(s) 246, 443, 529, 1156, 1408, 1722
BtsIMutI CAGTG 4 cut(s) 48, 564, 1404, 1407
Cac8I GCNNGC 4 cut(s) 273, 303, 903, 1510
CciI TCATGA 3 cut(s) 553, 2083, 2176
CfoI GCGC 2 cut(s) 115, 1508
Cfr10I RCCGGY 1 cut(s) 256
Cfr13I GGNCC 3 cut(s) 254, 1668, 1708
Csp6I GTAC 3 cut(s) 311, 475, 1317
CviQI GTAC 3 cut(s) 311, 475, 1317
DdeI CTNAG 3 cut(s) 666, 815, 2066
DpnI GATC 8 cut(s) 219, 710, 742, 1005, 1248, 1304, 1448, 2007
DpnII GATC 8 cut(s) 217, 708, 740, 1003, 1246, 1302, 1446, 2005
Eco105I TACGTA 1 cut(s) 463
Eco130I CCWWGG 5 cut(s) 12, 250, 800, 930, 1845
Eco31I GGTCTC 2 cut(s) 1027, 2066
Eco32I GATATC 1 cut(s) 1382
Eco47I GGWCC 2 cut(s) 1668, 1708
Eco47III AGCGCT 1 cut(s) 1507
Eco57I CTGAAG 1 cut(s) 341
Eco88I CYCGRG 1 cut(s) 615
EcoO109I RGGNCCY 1 cut(s) 1708
EcoRI GAATTC 3 cut(s) 175, 1210, 2017
EcoRII CCWGG 2 cut(s) 170, 1267
EcoRV GATATC 1 cut(s) 1382
EcoT14I CCWWGG 5 cut(s) 12, 250, 800, 930, 1845
EcoT22I ATGCAT 1 cut(s) 1054
ErhI CCWWGG 5 cut(s) 12, 250, 800, 930, 1845
Esp3I CGTCTC 1 cut(s) 436
FaqI GGGAC 1 cut(s) 1721
FauI CCCGC 1 cut(s) 894
FauNDI CATATG 3 cut(s) 633, 907, 1456
FblI GTMKAC 2 cut(s) 63, 465
Fnu4HI GCNGC 8 cut(s) 9, 201, 204, 207, 210, 915, 1504, 2166
FokI GGATG 6 cut(s) 233, 450, 536, 1163, 1415, 1729
Fsp4HI GCNGC 8 cut(s) 9, 201, 204, 207, 210, 915, 1504, 2166
FspBI CTAG 6 cut(s) 153, 251, 293, 1358, 1947, 1952
GlaI GCGC 2 cut(s) 114, 1507
GluI GCNGC 8 cut(s) 9, 201, 204, 207, 210, 915, 1504, 2166
GsuI CTGGAG 1 cut(s) 1290
HaeII RGCGCY 2 cut(s) 116, 1509
HaeIII GGCC 3 cut(s) 256, 1267, 1436
HapII CCGG 1 cut(s) 257
HhaI GCGC 2 cut(s) 115, 1508
Hin6I GCGC 2 cut(s) 113, 1506
HinP1I GCGC 2 cut(s) 113, 1506
HindIII AAGCTT 4 cut(s) 812, 1822, 2093, 2195
HinfI GANTC 6 cut(s) 289, 486, 613, 618, 1274, 2087
HpaII CCGG 1 cut(s) 257
HphI GGTGA 1 cut(s) 197
Hpy166II GTNNAC 3 cut(s) 46, 64, 466
Hpy188I TCNGA 4 cut(s) 121, 222, 360, 2023
Hpy188III TCNNGA 9 cut(s) 554, 1007, 1306, 1358, 1690, 1906, 2065, 2084, 2177
Hpy8I GTNNAC 3 cut(s) 46, 64, 466
Hpy99I CGWCG 1 cut(s) 268
HpyAV CCTTC 5 cut(s) 351, 476, 1000, 1339, 1343
HpyCH4III ACNGT 5 cut(s) 1165, 1316, 1399, 1969, 2156
HpyCH4IV ACGT 3 cut(s) 48, 462, 1425
HpyF10VI GCNNNNNNNGC 9 cut(s) 17, 137, 206, 209, 637, 911, 920, 1509, 1952
HpyF3I CTNAG 3 cut(s) 666, 815, 2066
HpySE526I ACGT 3 cut(s) 48, 462, 1425
HspAI GCGC 2 cut(s) 113, 1506
Kzo9I GATC 8 cut(s) 217, 708, 740, 1003, 1246, 1302, 1446, 2005
LmnI GCTCC 1 cut(s) 17
Lsp1109I GCAGC 6 cut(s) 190, 212, 221, 901, 1515, 2152
MaeI CTAG 6 cut(s) 153, 251, 293, 1358, 1947, 1952
MaeII ACGT 3 cut(s) 48, 462, 1425
MaeIII GTNAC 4 cut(s) 1372, 1405, 1573, 1927
MalI GATC 8 cut(s) 219, 710, 742, 1005, 1248, 1304, 1448, 2007
MboI GATC 8 cut(s) 217, 708, 740, 1003, 1246, 1302, 1446, 2005
MboII GAAGA 4 cut(s) 613, 978, 1241, 2129
MflI RGATCY 4 cut(s) 217, 1003, 1302, 1446
MhlI GDGCHC 1 cut(s) 456
MlyI GAGTC 4 cut(s) 495, 607, 627, 1283
MmeI TCCRAC 4 cut(s) 874, 1147, 1996, 2005
MnlI CCTC 7 cut(s) 511, 688, 969, 1012, 1659, 1813, 2007
Mph1103I ATGCAT 1 cut(s) 1054
MroXI GAANNNNTTC 2 cut(s) 1353, 1476
MslI CAYNNNNRTG 1 cut(s) 107
MspA1I CMGCKG 1 cut(s) 203
MspI CCGG 1 cut(s) 257
MspR9I CCNGG 2 cut(s) 172, 1269
Mva1269I GAATGC 1 cut(s) 985
MvaI CCWGG 2 cut(s) 172, 1269
MwoI GCNNNNNNNGC 9 cut(s) 17, 137, 206, 209, 637, 911, 920, 1509, 1952
NcoI CCATGG 3 cut(s) 12, 930, 1845
NdeI CATATG 3 cut(s) 633, 907, 1456
NdeII GATC 8 cut(s) 217, 708, 740, 1003, 1246, 1302, 1446, 2005
NlaIV GGNNCC 2 cut(s) 1287, 1709
NmeAIII GCCGAG 1 cut(s) 634
NmuCI GTSAC 2 cut(s) 1405, 1927
NsiI ATGCAT 1 cut(s) 1054
PaeR7I CTCGAG 1 cut(s) 615
PagI TCATGA 3 cut(s) 553, 2083, 2176
PcsI WCGNNNNNNNCGW 1 cut(s) 1422
PctI GAATGC 1 cut(s) 985
PdmI GAANNNNTTC 2 cut(s) 1353, 1476
PfeI GAWTC 2 cut(s) 289, 2087
PflMI CCANNNNNTGG 1 cut(s) 1187
PkrI GCNGC 8 cut(s) 10, 202, 205, 208, 211, 916, 1505, 2167
PleI GAGTC 4 cut(s) 494, 607, 626, 1282
PpsI GAGTC 4 cut(s) 494, 607, 626, 1282
Ppu21I YACGTR 1 cut(s) 463
PpuMI RGGWCCY 1 cut(s) 1708
PshAI GACNNNNGTC 1 cut(s) 617
PshBI ATTAAT 1 cut(s) 1065
Psp5II RGGWCCY 1 cut(s) 1708
Psp6I CCWGG 2 cut(s) 170, 1267
PspGI CCWGG 2 cut(s) 170, 1267
PspN4I GGNNCC 2 cut(s) 1287, 1709
PspPI GGNCC 3 cut(s) 254, 1668, 1708
PspPPI RGGWCCY 1 cut(s) 1708
PspXI VCTCGAGB 1 cut(s) 615
PsuI RGATCY 4 cut(s) 217, 1003, 1302, 1446
PvuII CAGCTG 1 cut(s) 203
RsaI GTAC 3 cut(s) 312, 476, 1318
RsaNI GTAC 3 cut(s) 311, 475, 1317
RseI CAYNNNNRTG 1 cut(s) 107
SatI GCNGC 8 cut(s) 9, 201, 204, 207, 210, 915, 1504, 2166
Sau3AI GATC 8 cut(s) 217, 708, 740, 1003, 1246, 1302, 1446, 2005
Sau96I GGNCC 3 cut(s) 254, 1668, 1708
SchI GAGTC 4 cut(s) 495, 607, 627, 1283
ScrFI CCNGG 2 cut(s) 172, 1269
SduI GDGCHC 1 cut(s) 456
Sfr274I CTCGAG 1 cut(s) 615
SinI GGWCC 2 cut(s) 1668, 1708
SlaI CTCGAG 1 cut(s) 615
SmiMI CAYNNNNRTG 1 cut(s) 107
SmlI CTYRAG 1 cut(s) 615
SmoI CTYRAG 1 cut(s) 615
SnaBI TACGTA 1 cut(s) 463
SsiI CCGC 5 cut(s) 9, 207, 901, 1204, 1626
SspI AATATT 1 cut(s) 2213
SspMI CTAG 6 cut(s) 153, 251, 293, 1358, 1947, 1952
StyD4I CCNGG 2 cut(s) 170, 1267
StyI CCWWGG 5 cut(s) 12, 250, 800, 930, 1845
TaaI ACNGT 5 cut(s) 1165, 1316, 1399, 1969, 2156
TaiI ACGT 3 cut(s) 51, 465, 1428
TaqI TCGA 6 cut(s) 105, 266, 616, 1214, 1252, 1774
TauI GCSGC 2 cut(s) 11, 209
TfiI GAWTC 2 cut(s) 289, 2087
TscAI CASTG 4 cut(s) 48, 571, 1404, 1414
TseFI GTSAC 2 cut(s) 1405, 1927
TseI GCWGC 6 cut(s) 200, 203, 209, 914, 1503, 2165
Tsp45I GTSAC 2 cut(s) 1405, 1927
TspGWI ACGGA 1 cut(s) 742
TspRI CASTG 4 cut(s) 48, 571, 1404, 1414
Van91I CCANNNNNTGG 1 cut(s) 1187
VpaK11BI GGWCC 2 cut(s) 1668, 1708
VspI ATTAAT 1 cut(s) 1065
XapI RAATTY 7 cut(s) 175, 845, 965, 1210, 1472, 1549, 2017
XbaI TCTAGA 1 cut(s) 1357
XcmI CCANNNNNNNNNTGG 1 cut(s) 187
XhoI CTCGAG 1 cut(s) 615
XmaJI CCTAGG 1 cut(s) 250
XmiI GTMKAC 2 cut(s) 63, 465
XmnI GAANNNNTTC 2 cut(s) 1353, 1476
XspI CTAG 6 cut(s) 153, 251, 293, 1358, 1947, 1952
Zsp2I ATGCAT 1 cut(s) 1054
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.