RLG00000013840

Glutamate receptor

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Reverse (-)
42667677 .. 42672367
4691 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000013840

Sequence Viewer

Length: 2784 bp
ATGAAGAAGAAGATGAGTACATCAACCTTCGTCTTTTCTTCCTTAATCTTCTTCTCCCTATCGTCAAGTATTTTGTTGGTGATGGGACAGAAGACGAGTGTCTCAGTGAATGTTGGTGTGATTCTTGATGACCTTGAGTCTGTAAGTTCAAAAGTTAGGCTGAGCTGCATCGAATCGGCCATCTCAGACTTTTATAGCTCTCGTGGTAACACTCAAACGAGGCTGGTTCTGAGCATTAGGGATTCCAGAGGTGATGTTGTCGATGCCGCTGCTGCAGCTTTGGACCTAATAAAGAATGTTCAAGTGCAAGCAATCTTGGGACCGAAATCATCAATGCAAACCAACTTTGTAATTGATCTTGGAGAAAAAGCACGAGTTCCCATAATCTCATTTTCAGCAACAAGTGCTTCCCTCACTTCCCTTCCAAGTACATATTTTTTCCGAGCTACACAGATTGATTCCTCTCAAGTCAAAGCCGTAGGGGCAATTATCAAAGCTTTTGGATGGAGAGAAGCTGTGCCAATCTATATTGACAATGAATACGGCAACGGAGTATTACCATACTTGATCGACGCCTTGCAGATTGTTGAAGCTCGTGTCCCTTATCGAAGTGCCATTTCCGGGTCAGCAACGGATGATCAAATTGAAAAGGAGCTTTTCAAGTTGATGACAATGCAAACTAGAGTCTTCATTGTGCACATGCCCGGACCTCTAGGCTCTCGGCTTTTTGCTAAGGCACAAAAGCTAGGGATGATGAATGAAGGCTATGTATGGATCATGACAGATGGTTTGAGCAATATTTTAAGTTCAACAAATGCATCAGTCATCAGTTCGATGCAGGGCGCACTAGGGGTGAGGACCTATGTGCCGAAAACAAAAGAACTTGTCGCTTTTAGAGATCGATGGAAGAAGCAGTTCCACCAACAAAATCCTACCATCATTGATGTTGAACTAGATGTGTTTGCACTTTGGGCATATGATGCTGCTTATGCATTAGCCATGGCGGTTGAAGAACTTGGGACTACAAGCTTTGTCTTCCAAACCACCATGTCTTCCACAAACTCATCATCTGATCTAGAGACTTTGGGGGTATCGCAAAATGGTTATCAGCTTAGCCGATCCTTGGCAAAGACAAAATTTAGAGGTCTTGCTGGAAATTTCAGTTTTGATAATGGACAGTTACAATCTTCCATCTTTGAAATATTGAATGTGATTGGTGATGGAGCAAGAGCAATTGGGTTTTGGACACCTGAAAATGGACTGGTGAGAAATCTGATCATTAATTCGACAAACACGTCTGTACCAACTTTAGGCTTCGTCATATGGCCCGGAGAGCATGGCTCCATTCCTAAGGGATGGGAGATCCCAACAAATGGAAAAAAGTTAAGAGTTGGAGTTCCAGTGAAATATGGTTTTACAGAGTTTGTTAAGGTGGTACATGATATTAGCACTAATACAACACCAGATGTTATTACTGGATTCTGTATCGACGTCTTTAATGCTGCAATGGAAGGATTACCATATGCCGTTACTTATGACTTCATTCCCTTTGCATATTCAAATGGCAGTTCTGCGGGCACTTATGATGATTTAGTCTATCAGGTTTTCCTTGGGGTATGGGAGAGAGTGGTTAGCAACTTGTCTAGGTTTGTGGTGATAGTATGGGTATTTGTGGTGCTCATACTGACTCAAAGTTACACAGCGAGTCTGACTTCAATGCTGACTGTGCAAAAGCTTGAGCCAACTTATACAAATATAAGCCATCTGATAAGCAATACAAAGGAGTATGTGGGCTGCCTGGATGGTTCTTTTGTCTGTAACCTTTTACGACAAGGTTTCCATGCTTCCAATATTAGGAAGTATAAATCTGCACAAGAATGTAACCAACTTTTGATAAACGGGAGTCAAAACGGGGGTATTGCTGCAGCCATTGACGAAACTCCAAACATGAAGCTTTTTCTTGCAAATTATTGCTCCAATTATACCATGATTGGTCCCATAATCAAAACTGATGGATTTGCCTTTGTTTTTCCTAAAGGTTCGCCTCTTGTACCAGATGTATCAAGGTCGATTCTGCAATTCACTGAGGGAGACTTGATGAAGGAACTTGAACGCAAATGGTTTGGGAACGAAACATCTTGTTCAGGTAGCAACCCCATGGTGTCTGATTCTAGCAGTCTTAGCCTTGATAGGTTTTGGGGTCTATTTCTGATTGCTGGCGTCACTTCGTTATTAGCCCTCATCATATTTGTAGCCTCATTTATATGGAGTTATCAGCACAAAGGAATTAGGGTTATGCTCAAAGTGTTTGACTGTAAAGACCTGAGCTCCCATACTTTTAAGAAGAAGAATTTGGGTGACCAGGTTGAGCGGTCACCAAGCTGCAGCAGCTACTCAATGAGCCCCTCGAATTTTAGCCATTCAAACCGTACAGATATTACAGAGATGGGGGAACAAGCAAAATTGCATGCTGGTCTAGTTGAATTTCCAGCTAGTGTGCTTGATCTTCCAAACTCAGAAATGGCAACAGCTCCTCAAAGTGTCCTCAGCACTCGAAAATTGTGGTTGCAACCATTCCTCATCTTCTTGGTATTAAATCAGACCGGGTTCGTGCGGTACTCTGTGAGGATGACTGGCGGTGGCATGCTGGATTGGGAGACTGCGATTTGGGATCCCAGATCCGACCTTCTTTCCTCATGGCAGCGCGTGCAGGTGGTCCATCTCAGCGGCGCTCTGGCTAGTTCTTGGATGCCTGTCAAGGCGAAGGCTAGGCTTTGGGGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

928

Amino Acids

102.07

Weight (kDa)

8.16

Isoelectric Point (pI)

33.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peripla_BP_6 PF13458 37 - 342 2e-17 Periplasmic binding protein
ANF_receptor PF01094 55 - 406 8e-83 Receptor family ligand binding region
Lig_chan PF00060 538 - 741 3.3e-20 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2701
AasI GACNNNNNNGTC 1 cut(s) 1294
AatII GACGTC 1 cut(s) 1494
Acc36I ACCTGC 1 cut(s) 2701
AccB7I CCANNNNNTGG 1 cut(s) 1373
AccBSI CCGCTC 1 cut(s) 2371
AccII CGCG 1 cut(s) 2706
AciI CCGC 7 cut(s) 267, 1004, 1574, 2371, 2614, 2637, 2727
AclWI GGATC 6 cut(s) 782, 1113, 1357, 2666, 2673, 2679
AcoI YGGCCR 1 cut(s) 177
AcsI RAATTY 5 cut(s) 1136, 1156, 2350, 2410, 2483
AcyI GRCGYC 3 cut(s) 573, 1491, 2220
AfaI GTAC 7 cut(s) 19, 430, 1302, 1437, 2052, 2431, 2618
AfiI CCNNNNNNNGG 6 cut(s) 621, 1123, 1256, 1310, 1373, 1854
AflIII ACRYGT 1 cut(s) 1293
AhdI GACNNNNNGTC 1 cut(s) 136
AjiI CACGTC 1 cut(s) 1296
AjnI CCWGG 2 cut(s) 1797, 2361
AjuI GAANNNNNNNTTGG 2 cut(s) 2336, 2368
Alw21I GWGCWC 3 cut(s) 699, 1680, 2330
Alw26I GTCTC 4 cut(s) 106, 1073, 2085, 2651
Alw44I GTGCAC 1 cut(s) 695
AlwI GGATC 6 cut(s) 782, 1113, 1357, 2666, 2673, 2679
AoxI GGCC 2 cut(s) 177, 1325
ApaLI GTGCAC 1 cut(s) 695
ApoI RAATTY 5 cut(s) 1136, 1156, 2350, 2410, 2483
ArsI GACNNNNNNTTYG 2 cut(s) 772, 804
AseI ATTAAT 1 cut(s) 1281
Asp700I GAANNNNTTC 1 cut(s) 914
AspLEI GCGC 3 cut(s) 845, 2706, 2732
AspS9I GGNCC 7 cut(s) 283, 320, 707, 858, 1326, 1994, 2716
AsuC2I CCSGG 4 cut(s) 622, 705, 1329, 2605
AsuHPI GGTGA 8 cut(s) 91, 263, 865, 1229, 1276, 1666, 2367, 2369
AvaII GGWCC 6 cut(s) 283, 320, 707, 858, 1994, 2716
AxyI CCTNAGG 1 cut(s) 1350
BaeGI GKGCMC 2 cut(s) 699, 1580
BaeI ACNNNNGTAYC 2 cut(s) 1284, 1317
BamHI GGATCC 1 cut(s) 2671
BanII GRGCYC 2 cut(s) 2330, 2405
BauI CACGAG 3 cut(s) 201, 372, 594
BbsI GAAGAC 4 cut(s) 98, 679, 1027, 1044
Bbv12I GWGCWC 3 cut(s) 699, 1680, 2330
BbvCI CCTCAGC 1 cut(s) 2546
BceAI ACGGC 3 cut(s) 461, 559, 1511
BcgI CGANNNNNNTGC 2 cut(s) 251, 285
BciT130I CCWGG 2 cut(s) 1799, 2363
BclI TGATCA 2 cut(s) 637, 1275
BcnI CCSGG 4 cut(s) 622, 705, 1329, 2605
BcoDI GTCTC 4 cut(s) 106, 1073, 2085, 2651
BfmI CTRYAG 3 cut(s) 273, 1923, 2383
BfoI RGCGCY 1 cut(s) 2733
BfuAI ACCTGC 1 cut(s) 2701
BglI GCCNNNNNGGC 1 cut(s) 482
BlpI GCTNAGC 2 cut(s) 161, 1112
Bme1390I CCNGG 6 cut(s) 622, 705, 1329, 1799, 2363, 2605
Bme18I GGWCC 6 cut(s) 283, 320, 707, 858, 1994, 2716
BmeRI GACNNNNNGTC 1 cut(s) 136
BmgBI CACGTC 1 cut(s) 1296
BmgT120I GGNCC 7 cut(s) 283, 320, 707, 858, 1326, 1994, 2716
BmiI GGNNCC 4 cut(s) 321, 1342, 1996, 2673
BmrFI CCNGG 6 cut(s) 622, 705, 1329, 1799, 2363, 2605
BmsI GCATC 6 cut(s) 177, 253, 825, 827, 970, 2739
BoxI GACNNNNGTC 1 cut(s) 98
BpiI GAAGAC 4 cut(s) 98, 679, 1027, 1044
BplI GAGNNNNNCTC 2 cut(s) 1325, 1357
Bpu10I CCTNAGC 3 cut(s) 732, 2324, 2546
Bpu1102I GCTNAGC 2 cut(s) 161, 1112
BpuEI CTTGAG 3 cut(s) 155, 450, 1757
BpuMI CCSGG 4 cut(s) 622, 705, 1329, 2605
Bsa29I ATCGAT 1 cut(s) 901
BsaHI GRCGYC 3 cut(s) 573, 1491, 2220
BsaJI CCNNGG 4 cut(s) 999, 1122, 1609, 2157
BsaXI ACNNNNNCTCC 4 cut(s) 1386, 1416, 2312, 2342
Bsc4I CCNNNNNNNGG 6 cut(s) 621, 1123, 1256, 1310, 1373, 1854
Bse1I ACTGG 4 cut(s) 1266, 1400, 1480, 2638
Bse21I CCTNAGG 1 cut(s) 1350
Bse3DI GCAATG 1 cut(s) 1512
BseBI CCWGG 2 cut(s) 1799, 2363
BseCI ATCGAT 1 cut(s) 901
BseDI CCNNGG 4 cut(s) 999, 1122, 1609, 2157
BseGI GGATG 7 cut(s) 509, 640, 756, 1361, 1807, 2634, 2754
BseLI CCNNNNNNNGG 6 cut(s) 621, 1123, 1256, 1310, 1373, 1854
BseMI GCAATG 1 cut(s) 1512
BseMII CTCAG 9 cut(s) 117, 152, 198, 221, 2076, 2315, 2529, 2560, 2737
BseNI ACTGG 4 cut(s) 1266, 1400, 1480, 2638
BseRI GAGGAG 1 cut(s) 2523
BseSI GKGCMC 2 cut(s) 699, 1580
BsgI GTGCAG 2 cut(s) 1854, 2729
Bsh1236I CGCG 1 cut(s) 2706
BshFI GGCC 2 cut(s) 179, 1327
BshVI ATCGAT 1 cut(s) 901
BsiHKAI GWGCWC 3 cut(s) 699, 1680, 2330
BsiSI CCGG 4 cut(s) 621, 705, 1329, 2604
BslFI GGGAC 5 cut(s) 99, 333, 584, 1033, 1980
BslI CCNNNNNNNGG 6 cut(s) 621, 1123, 1256, 1310, 1373, 1854
BsmAI GTCTC 4 cut(s) 106, 1073, 2085, 2651
BsmFI GGGAC 5 cut(s) 99, 333, 584, 1033, 1980
BsnI GGCC 2 cut(s) 179, 1327
Bsp1286I GDGCHC 5 cut(s) 699, 1580, 1680, 2330, 2405
Bsp1720I GCTNAGC 2 cut(s) 161, 1112
Bsp19I CCATGG 2 cut(s) 999, 2157
BspACI CCGC 7 cut(s) 267, 1004, 1574, 2371, 2614, 2637, 2727
BspANI GGCC 2 cut(s) 179, 1327
BspCNI CTCAG 9 cut(s) 116, 153, 197, 222, 2077, 2316, 2528, 2559, 2736
BspDI ATCGAT 1 cut(s) 901
BspFNI CGCG 1 cut(s) 2706
BspHI TCATGA 1 cut(s) 777
BspLI GGNNCC 4 cut(s) 321, 1342, 1996, 2673
BspMAI CTGCAG 3 cut(s) 277, 1927, 2387
BspMI ACCTGC 1 cut(s) 2701
BspPI GGATC 6 cut(s) 782, 1113, 1357, 2666, 2673, 2679
BsrBI CCGCTC 1 cut(s) 2371
BsrDI GCAATG 1 cut(s) 1512
BsrI ACTGG 4 cut(s) 1266, 1400, 1480, 2638
BssECI CCNNGG 4 cut(s) 999, 1122, 1609, 2157
BssNI GRCGYC 3 cut(s) 573, 1491, 2220
BssSI CACGAG 3 cut(s) 201, 372, 594
BssT1I CCWWGG 4 cut(s) 999, 1122, 1609, 2157
Bst2BI CACGAG 3 cut(s) 201, 372, 594
Bst2UI CCWGG 2 cut(s) 1799, 2363
Bst4CI ACNGT 4 cut(s) 1179, 1726, 2315, 2429
BstACI GRCGYC 3 cut(s) 573, 1491, 2220
BstAPI GCANNNNNTGC 3 cut(s) 404, 980, 2707
BstC8I GCNNGC 6 cut(s) 309, 1576, 2218, 2469, 2645, 2708
BstDSI CCRYGG 2 cut(s) 999, 2157
BstEII GGTNACC 2 cut(s) 2357, 2373
BstF5I GGATG 7 cut(s) 509, 640, 756, 1361, 1807, 2634, 2754
BstFNI CGCG 1 cut(s) 2706
BstH2I RGCGCY 1 cut(s) 2733
BstHHI GCGC 3 cut(s) 845, 2706, 2732
BstMAI GTCTC 4 cut(s) 106, 1073, 2085, 2651
BstNI CCWGG 2 cut(s) 1799, 2363
BstNSI RCATGY 3 cut(s) 703, 2471, 2647
BstPAI GACNNNNGTC 1 cut(s) 98
BstPI GGTNACC 2 cut(s) 2357, 2373
BstSCI CCNGG 6 cut(s) 620, 703, 1327, 1797, 2361, 2603
BstSFI CTRYAG 3 cut(s) 273, 1923, 2383
BstSLI GKGCMC 2 cut(s) 699, 1580
BstUI CGCG 1 cut(s) 2706
BstV2I GAAGAC 4 cut(s) 98, 679, 1027, 1044
BstX2I RGATCY 3 cut(s) 1362, 2671, 2678
BstYI RGATCY 3 cut(s) 1362, 2671, 2678
Bsu15I ATCGAT 1 cut(s) 901
Bsu36I CCTNAGG 1 cut(s) 1350
BsuRI GGCC 2 cut(s) 179, 1327
BsuTUI ATCGAT 1 cut(s) 901
BtgI CCRYGG 2 cut(s) 999, 2157
BtrI CACGTC 1 cut(s) 1296
BtsCI GGATG 7 cut(s) 509, 640, 756, 1361, 1807, 2634, 2754
BtsIMutI CAGTG 3 cut(s) 111, 1407, 2082
BveI ACCTGC 1 cut(s) 2701
Cac8I GCNNGC 6 cut(s) 309, 1576, 2218, 2469, 2645, 2708
CciI TCATGA 1 cut(s) 777
CfoI GCGC 3 cut(s) 845, 2706, 2732
Cfr13I GGNCC 7 cut(s) 283, 320, 707, 858, 1326, 1994, 2716
ClaI ATCGAT 1 cut(s) 901
CseI GACGC 2 cut(s) 581, 2209
CsiI ACCWGGT 1 cut(s) 2361
Csp6I GTAC 7 cut(s) 18, 429, 1301, 1436, 2051, 2430, 2617
CviQI GTAC 7 cut(s) 18, 429, 1301, 1436, 2051, 2430, 2617
DrdI GACNNNNNNGTC 1 cut(s) 1294
DriI GACNNNNNGTC 1 cut(s) 136
DseDI GACNNNNNNGTC 1 cut(s) 1294
EaeI YGGCCR 1 cut(s) 177
Eam1105I GACNNNNNGTC 1 cut(s) 136
Ecl136II GAGCTC 1 cut(s) 2328
Eco130I CCWWGG 4 cut(s) 999, 1122, 1609, 2157
Eco24I GRGCYC 2 cut(s) 2330, 2405
Eco47I GGWCC 6 cut(s) 283, 320, 707, 858, 1994, 2716
Eco53kI GAGCTC 1 cut(s) 2328
Eco81I CCTNAGG 1 cut(s) 1350
Eco91I GGTNACC 2 cut(s) 2357, 2373
EcoICRI GAGCTC 1 cut(s) 2328
EcoO109I RGGNCCY 1 cut(s) 858
EcoO65I GGTNACC 2 cut(s) 2357, 2373
EcoRII CCWGG 2 cut(s) 1797, 2361
EcoT14I CCWWGG 4 cut(s) 999, 1122, 1609, 2157
EcoT22I ATGCAT 2 cut(s) 820, 994
EcoT38I GRGCYC 2 cut(s) 2330, 2405
ErhI CCWWGG 4 cut(s) 999, 1122, 1609, 2157
FaqI GGGAC 5 cut(s) 99, 333, 584, 1033, 1980
FauI CCCGC 1 cut(s) 1567
FauNDI CATATG 3 cut(s) 976, 1322, 1522
FbaI TGATCA 2 cut(s) 637, 1275
FokI GGATG 7 cut(s) 516, 647, 763, 1368, 1814, 2641, 2761
FriOI GRGCYC 2 cut(s) 2330, 2405
GlaI GCGC 3 cut(s) 844, 2705, 2731
HaeII RGCGCY 1 cut(s) 2733
HaeIII GGCC 2 cut(s) 179, 1327
HapII CCGG 4 cut(s) 621, 705, 1329, 2604
HgaI GACGC 2 cut(s) 581, 2209
HhaI GCGC 3 cut(s) 845, 2706, 2732
Hin1I GRCGYC 3 cut(s) 573, 1491, 2220
Hin6I GCGC 3 cut(s) 843, 2704, 2730
HinP1I GCGC 3 cut(s) 843, 2704, 2730
HindIII AAGCTT 4 cut(s) 495, 1027, 1733, 1952
HpaII CCGG 4 cut(s) 621, 705, 1329, 2604
HphI GGTGA 8 cut(s) 91, 263, 865, 1229, 1276, 1666, 2367, 2369
Hpy166II GTNNAC 1 cut(s) 697
Hpy188III TCNNGA 4 cut(s) 125, 246, 778, 1076
Hpy8I GTNNAC 1 cut(s) 697
Hpy99I CGWCG 2 cut(s) 575, 1493
HpyAV CCTTC 7 cut(s) 37, 431, 755, 1505, 2095, 2696, 2758
HpyCH4III ACNGT 4 cut(s) 1179, 1726, 2315, 2429
HpyCH4IV ACGT 2 cut(s) 1295, 1491
HpySE526I ACGT 2 cut(s) 1295, 1491
Hsp92I GRCGYC 3 cut(s) 573, 1491, 2220
HspAI GCGC 3 cut(s) 843, 2704, 2730
Ksp22I TGATCA 2 cut(s) 637, 1275
LmnI GCTCC 6 cut(s) 652, 1223, 1346, 1979, 2333, 2536
LweI GCATC 6 cut(s) 177, 253, 825, 827, 970, 2739
MabI ACCWGGT 1 cut(s) 2361
MaeII ACGT 2 cut(s) 1295, 1491
MaeIII GTNAC 9 cut(s) 206, 1179, 1528, 1694, 1817, 1880, 2221, 2357, 2373
MbiI CCGCTC 1 cut(s) 2371
MfeI CAATTG 1 cut(s) 1233
MflI RGATCY 3 cut(s) 1362, 2671, 2678
MhlI GDGCHC 5 cut(s) 699, 1580, 1680, 2330, 2405
MlyI GAGTC 5 cut(s) 146, 693, 1681, 1714, 1912
MmeI TCCRAC 2 cut(s) 1372, 2706
Mph1103I ATGCAT 2 cut(s) 820, 994
MroXI GAANNNNTTC 1 cut(s) 914
MseI TTAA 8 cut(s) 44, 803, 1281, 1385, 1428, 1497, 2340, 2594
MslI CAYNNNNRTG 2 cut(s) 1876, 2263
MspA1I CMGCKG 2 cut(s) 269, 2727
MspI CCGG 4 cut(s) 621, 705, 1329, 2604
MspR9I CCNGG 6 cut(s) 622, 705, 1329, 1799, 2363, 2605
MunI CAATTG 1 cut(s) 1233
MvaI CCWGG 2 cut(s) 1799, 2363
MvnI CGCG 1 cut(s) 2706
NciI CCSGG 4 cut(s) 622, 705, 1329, 2605
NcoI CCATGG 2 cut(s) 999, 2157
NdeI CATATG 3 cut(s) 976, 1322, 1522
NlaIV GGNNCC 4 cut(s) 321, 1342, 1996, 2673
NmeAIII GCCGAG 1 cut(s) 700
NmuCI GTSAC 3 cut(s) 2221, 2357, 2373
NsiI ATGCAT 2 cut(s) 820, 994
NspI RCATGY 3 cut(s) 703, 2471, 2647
PaeI GCATGC 2 cut(s) 2471, 2647
PagI TCATGA 1 cut(s) 777
PaqCI CACCTGC 1 cut(s) 2701
PcsI WCGNNNNNNNCGW 1 cut(s) 1292
PdmI GAANNNNTTC 1 cut(s) 914
PfeI GAWTC 7 cut(s) 121, 173, 242, 458, 1479, 2071, 2168
PflMI CCANNNNNTGG 1 cut(s) 1373
PleI GAGTC 5 cut(s) 145, 692, 1681, 1713, 1911
PpsI GAGTC 5 cut(s) 145, 692, 1681, 1713, 1911
PpuMI RGGWCCY 1 cut(s) 858
PshAI GACNNNNGTC 1 cut(s) 98
PshBI ATTAAT 1 cut(s) 1281
Psp124BI GAGCTC 1 cut(s) 2330
Psp5II RGGWCCY 1 cut(s) 858
Psp6I CCWGG 2 cut(s) 1797, 2361
PspEI GGTNACC 2 cut(s) 2357, 2373
PspGI CCWGG 2 cut(s) 1797, 2361
PspN4I GGNNCC 4 cut(s) 321, 1342, 1996, 2673
PspPI GGNCC 7 cut(s) 283, 320, 707, 858, 1326, 1994, 2716
PspPPI RGGWCCY 1 cut(s) 858
PstI CTGCAG 3 cut(s) 277, 1927, 2387
PsuI RGATCY 3 cut(s) 1362, 2671, 2678
RsaI GTAC 7 cut(s) 19, 430, 1302, 1437, 2052, 2431, 2618
RsaNI GTAC 7 cut(s) 18, 429, 1301, 1436, 2051, 2430, 2617
RseI CAYNNNNRTG 2 cut(s) 1876, 2263
SacI GAGCTC 1 cut(s) 2330
SaqAI TTAA 8 cut(s) 44, 803, 1281, 1385, 1428, 1497, 2340, 2594
Sau96I GGNCC 7 cut(s) 283, 320, 707, 858, 1326, 1994, 2716
SchI GAGTC 5 cut(s) 146, 693, 1681, 1714, 1912
ScrFI CCNGG 6 cut(s) 622, 705, 1329, 1799, 2363, 2605
SduI GDGCHC 5 cut(s) 699, 1580, 1680, 2330, 2405
SexAI ACCWGGT 1 cut(s) 2361
SfaNI GCATC 6 cut(s) 177, 253, 825, 827, 970, 2739
SfcI CTRYAG 3 cut(s) 273, 1923, 2383
SinI GGWCC 6 cut(s) 283, 320, 707, 858, 1994, 2716
SmiMI CAYNNNNRTG 2 cut(s) 1876, 2263
SmlI CTYRAG 3 cut(s) 134, 465, 1736
SmoI CTYRAG 3 cut(s) 134, 465, 1736
SphI GCATGC 2 cut(s) 2471, 2647
SsiI CCGC 7 cut(s) 267, 1004, 1574, 2371, 2614, 2637, 2727
SspI AATATT 3 cut(s) 799, 1203, 1852
SstI GAGCTC 1 cut(s) 2330
StyD4I CCNGG 6 cut(s) 620, 703, 1327, 1797, 2361, 2603
StyI CCWWGG 4 cut(s) 999, 1122, 1609, 2157
TaaI ACNGT 4 cut(s) 1179, 1726, 2315, 2429
TaiI ACGT 2 cut(s) 1298, 1494
TaqII GACCGA 1 cut(s) 337
TatI WGTACW 2 cut(s) 17, 428
TauI GCSGC 2 cut(s) 269, 2730
TfiI GAWTC 7 cut(s) 121, 173, 242, 458, 1479, 2071, 2168
Tru1I TTAA 8 cut(s) 44, 803, 1281, 1385, 1428, 1497, 2340, 2594
Tru9I TTAA 8 cut(s) 44, 803, 1281, 1385, 1428, 1497, 2340, 2594
TscAI CASTG 3 cut(s) 111, 1407, 2089
TseFI GTSAC 3 cut(s) 2221, 2357, 2373
Tsp45I GTSAC 3 cut(s) 2221, 2357, 2373
TspDTI ATGAA 8 cut(s) 17, 552, 679, 770, 774, 1531, 1964, 2114
TspGWI ACGGA 2 cut(s) 564, 647
TspRI CASTG 3 cut(s) 111, 1407, 2089
Van91I CCANNNNNTGG 1 cut(s) 1373
VneI GTGCAC 1 cut(s) 695
VpaK11BI GGWCC 6 cut(s) 283, 320, 707, 858, 1994, 2716
VspI ATTAAT 1 cut(s) 1281
XapI RAATTY 5 cut(s) 1136, 1156, 2350, 2410, 2483
XbaI TCTAGA 1 cut(s) 1075
XceI RCATGY 3 cut(s) 703, 2471, 2647
XmnI GAANNNNTTC 1 cut(s) 914
ZraI GACGTC 1 cut(s) 1492
Zsp2I ATGCAT 2 cut(s) 820, 994
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.