Rh5CG306000

Glutamate receptor

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
Physical Location & Seq
Reverse (-)
33762021 .. 33772483
10463 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG306000.1

Sequence Viewer

Length: 1764 bp
ATGGCAGCTGAAAACACATCAACAATCACAGTAAACGTGGGAGTTGTTGTAGACCTTGATGAAGTGAGTGGGAAGATGTATTTGAGTTGCATAGAAATGGCGCTCTCAGACTTCTATGCTTCCCATGCTCAATACAAGACCAGGGTCGTTTTGAACACCAGTAACTCCCACGAAGATGTCGTTGGTGCAGCTGATGCAGCTTTGGATCTGATAACGAATGTAGAAGTGAAAGCAATCCTAGGACCAATGACATCAATGCAAGCAACTTTTGTTGTTAAACTTGGAGAAAAAGCTCATGTGCCAATCATATCATTTTCTGCAACAAGCCCTTCTCTTACTTCACTTCAGAGCTCCTATTTTTTCCAATTTGCACAAAATGACTCAACCCAAGTGAAAGCCATAAGTGGTATTGTTCAAAACTTTGGATGGAGGCGAGTTGTCCCCATTTACGTAGACAATATGTACGGGGAAGGAATCATGCCCTTTCTAATTGATGCCTTGCTCGAGGTTGATGCTCATGTCCCATATCGAAGTGTAATTTCACAATCAGCCACCGATGATCAAGTTGAGATAGAACTTTACAAGTTAATGACAATGCAGACTAGAGTCTTTATAGTGCATATGATGCCTAAACTTGCATCCCAGTTATTTGCCAAGGCGAAAGAGATTGGAATGATGAACAAGGGTTTTGTATGGATCACGACCAATGGGATTGGAGATCGTTTAAAGGCAATGGGATCTGTTATGAATTCGATGCAAGGAGTATTAAGTGTGGAAACTGATGTTTCAGACACATTGAAGCTTAGAGAATTTAAAACAAGGTGGAAAAGACAATTCCAACAAGATTATCCAGAAATCATTGATGTTGAGCTTGATGCCTTTGGATATCGGGCTTATGATGCAGCTTTTGCAATAGCCATGGCAGTTGAAAAAGTTGGGAATGCAGGCTTTGGATTTCAAAAGGGAAATGCTTCATCTTTCAAATCTACAGATCTTGGAACTCTAAAGGTCTCTCAATATGGCTCAAACCTTTCTAATGCCTTATCTCTTACCAGTTTCAGAGGCATAGTTGGTGATTTTAGTCTTGTTGATAGGCAACTTCAACTGTCAACTTTTATGATTGTTAATGTGAATGGTAATGGAGTAAGAGCAGTTGGTTATTGGACACCGGAAAATGGAAGGTTAATGAAGCAGTTGAATTCAACAAACAGTTGTAATGTTTCAGGTTTCAAGTGTGATGCTCTTGGACCCATTATATGGCCGGGAGAGTCATCCTCCGTTCCCAAAGGATGGGAGATCCCAGAAAATGGTACGAGGTTAAGATTTGGAGTTCCAGTGAAGGATGGTTTTACAGAGTTTGTTAAAGTAACAACAGATTTGGGAACTAATACCACTGATGTCACCGGGTTCAGTATTGATGTGTTTAAAGCTGTAGTGGAACTGTTACCATATGCACTTCCTTATGAGTTGATTCCCTATGCATATCCTAATGGCACCAGCGCTGGCACATATAATGATTTAATCTATCGAGTATACCTTGGGAATTTTGACGGTGTGGTTGGAGATGCAACAATTAGAGCAAACAGAACATTGTATGTGGATTTTGCAATGCCATATACGGAGTCTGGTGTAGTGATGGTTGTGCCAATCATAGACAGCAGAACCAAAAATGCATGGGTTTTTTTTGCAGCCTTTAACATGGAACCTTTGGATGACTACTTTGGGTTTTTTCATCTTTATTGGTTTTGTGATTTGGGTGCTTGA

Protein Analysis

587

Amino Acids

64.76

Weight (kDa)

5.03

Isoelectric Point (pI)

23.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peripla_BP_6 PF13458 11 - 313 3.6e-21 Periplasmic binding protein
ANF_receptor PF01094 30 - 380 7.4e-74 Receptor family ligand binding region
Lig_chan-Glu_bd PF10613 459 - 548 2.5e-06 Ligated ion channel L-glutamate- and glycine-binding site
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1493
AccB7I CCANNNNNTGG 3 cut(s) 1257, 1290, 1307
AccI GTMKAC 3 cut(s) 51, 453, 1533
AclWI GGATC 4 cut(s) 213, 704, 745, 1291
AcoI YGGCCR 1 cut(s) 1259
AcsI RAATTY 4 cut(s) 748, 809, 1198, 1543
AcuI CTGAAG 1 cut(s) 329
AfaI GTAC 2 cut(s) 464, 1312
AfeI AGCGCT 1 cut(s) 1501
AfiI CCNNNNNNNGG 4 cut(s) 1175, 1257, 1290, 1307
AjnI CCWGG 1 cut(s) 140
AjuI GAANNNNNNNTTGG 2 cut(s) 165, 197
AluBI AGCT 9 cut(s) 8, 191, 200, 293, 351, 802, 871, 905, 1430
AluI AGCT 9 cut(s) 8, 191, 200, 293, 351, 802, 871, 905, 1430
Alw21I GWGCWC 1 cut(s) 353
Alw26I GTCTC 1 cut(s) 1015
AlwI GGATC 4 cut(s) 213, 704, 745, 1291
Ama87I CYCGRG 1 cut(s) 503
Aor51HI AGCGCT 1 cut(s) 1501
AoxI GGCC 1 cut(s) 1259
ApeKI GCWGC 5 cut(s) 5, 188, 197, 902, 1688
ApoI RAATTY 4 cut(s) 748, 809, 1198, 1543
Asp700I GAANNNNTTC 1 cut(s) 970
AspA2I CCTAGG 1 cut(s) 238
AspLEI GCGC 2 cut(s) 103, 1502
AspS9I GGNCC 2 cut(s) 242, 1247
AsuC2I CCSGG 2 cut(s) 1263, 1405
AsuHPI GGTGA 2 cut(s) 1085, 1393
AvaI CYCGRG 1 cut(s) 503
AvaII GGWCC 2 cut(s) 242, 1247
AvrII CCTAGG 1 cut(s) 238
BanI GGYRCC 1 cut(s) 1493
BanII GRGCYC 1 cut(s) 353
Bbv12I GWGCWC 1 cut(s) 353
BbvI GCAGC 5 cut(s) 17, 200, 209, 914, 1700
BccI CCATC 4 cut(s) 420, 1284, 1337, 1630
BcgI CGANNNNNNTGC 2 cut(s) 494, 528
BciT130I CCWGG 1 cut(s) 142
BclI TGATCA 1 cut(s) 559
BcnI CCSGG 2 cut(s) 1263, 1405
BcoDI GTCTC 1 cut(s) 1015
BfaI CTAG 2 cut(s) 239, 603
BfmI CTRYAG 2 cut(s) 987, 1431
BfoI RGCGCY 2 cut(s) 104, 1503
BglII AGATCT 1 cut(s) 991
BisI GCNGC 5 cut(s) 6, 189, 198, 903, 1689
BlnI CCTAGG 1 cut(s) 238
BlsI GCNGC 5 cut(s) 7, 190, 199, 904, 1690
Bme1390I CCNGG 3 cut(s) 142, 1263, 1405
Bme18I GGWCC 2 cut(s) 242, 1247
BmeT110I CYCGRG 1 cut(s) 503
BmgT120I GGNCC 2 cut(s) 242, 1247
BmiI GGNNCC 3 cut(s) 1249, 1495, 1704
BmrFI CCNGG 3 cut(s) 142, 1263, 1405
BmrI ACTGGG 1 cut(s) 637
BmuI ACTGGG 1 cut(s) 637
BoxI GACNNNNGTC 2 cut(s) 143, 605
BplI GAGNNNNNCTC 2 cut(s) 1259, 1291
BpuMI CCSGG 2 cut(s) 1263, 1405
BsaAI YACGTR 1 cut(s) 451
BsaI GGTCTC 1 cut(s) 1015
BsaJI CCNNGG 5 cut(s) 141, 238, 654, 918, 1537
BsaWI WCCGGW 1 cut(s) 1168
BsaXI ACNNNNNCTCC 4 cut(s) 33, 63, 1320, 1350
Bsc4I CCNNNNNNNGG 4 cut(s) 1175, 1257, 1290, 1307
Bse1I ACTGG 4 cut(s) 159, 643, 1053, 1334
Bse3DI GCAATG 2 cut(s) 738, 1614
BseBI CCWGG 1 cut(s) 142
BseDI CCNNGG 5 cut(s) 141, 238, 654, 918, 1537
BseGI GGATG 6 cut(s) 431, 638, 1271, 1295, 1348, 1717
BseLI CCNNNNNNNGG 4 cut(s) 1175, 1257, 1290, 1307
BseMI GCAATG 2 cut(s) 738, 1614
BseMII CTCAG 1 cut(s) 120
BseNI ACTGG 4 cut(s) 159, 643, 1053, 1334
BseXI GCAGC 5 cut(s) 17, 200, 209, 914, 1700
BsgI GTGCAG 1 cut(s) 207
BshFI GGCC 1 cut(s) 1261
BshNI GGYRCC 1 cut(s) 1493
BsiHKAI GWGCWC 1 cut(s) 353
BsiHKCI CYCGRG 1 cut(s) 503
BsiSI CCGG 3 cut(s) 1169, 1262, 1404
BslFI GGGAC 2 cut(s) 425, 506
BslI CCNNNNNNNGG 4 cut(s) 1175, 1257, 1290, 1307
BsmAI GTCTC 1 cut(s) 1015
BsmFI GGGAC 2 cut(s) 425, 506
BsmI GAATGC 1 cut(s) 946
BsnI GGCC 1 cut(s) 1261
Bso31I GGTCTC 1 cut(s) 1015
BsoBI CYCGRG 1 cut(s) 503
Bsp1286I GDGCHC 1 cut(s) 353
Bsp143I GATC 7 cut(s) 205, 559, 696, 718, 737, 991, 1296
Bsp19I CCATGG 1 cut(s) 918
BspANI GGCC 1 cut(s) 1261
BspCNI CTCAG 1 cut(s) 119
BspLI GGNNCC 3 cut(s) 1249, 1495, 1704
BspPI GGATC 4 cut(s) 213, 704, 745, 1291
BspT107I GGYRCC 1 cut(s) 1493
BspTNI GGTCTC 1 cut(s) 1015
BsrDI GCAATG 2 cut(s) 738, 1614
BsrI ACTGG 4 cut(s) 159, 643, 1053, 1334
BssECI CCNNGG 5 cut(s) 141, 238, 654, 918, 1537
BssMI GATC 7 cut(s) 205, 559, 696, 718, 737, 991, 1296
BssNAI GTATAC 1 cut(s) 1534
BssT1I CCWWGG 4 cut(s) 238, 654, 918, 1537
Bst1107I GTATAC 1 cut(s) 1534
Bst2UI CCWGG 1 cut(s) 142
Bst4CI ACNGT 5 cut(s) 31, 1107, 1211, 1443, 1553
BstAPI GCANNNNNTGC 3 cut(s) 194, 625, 908
BstBAI YACGTR 1 cut(s) 451
BstC8I GCNNGC 3 cut(s) 261, 946, 1504
BstDEI CTNAG 2 cut(s) 106, 803
BstDSI CCRYGG 1 cut(s) 918
BstF5I GGATG 6 cut(s) 431, 638, 1271, 1295, 1348, 1717
BstH2I RGCGCY 2 cut(s) 104, 1503
BstHHI GCGC 2 cut(s) 103, 1502
BstKTI GATC 7 cut(s) 208, 562, 699, 721, 740, 994, 1299
BstMAI GTCTC 1 cut(s) 1015
BstMBI GATC 7 cut(s) 205, 559, 696, 718, 737, 991, 1296
BstMWI GCNNNNNNNGC 6 cut(s) 125, 194, 197, 625, 899, 908
BstNI CCWGG 1 cut(s) 142
BstPAI GACNNNNGTC 2 cut(s) 143, 605
BstSCI CCNGG 3 cut(s) 140, 1261, 1403
BstSFI CTRYAG 2 cut(s) 987, 1431
BstSNI TACGTA 1 cut(s) 451
BstV1I GCAGC 5 cut(s) 17, 200, 209, 914, 1700
BstX2I RGATCY 4 cut(s) 205, 737, 991, 1296
BstYI RGATCY 4 cut(s) 205, 737, 991, 1296
BstZ17I GTATAC 1 cut(s) 1534
BsuRI GGCC 1 cut(s) 1261
BtgI CCRYGG 1 cut(s) 918
BtsCI GGATG 6 cut(s) 431, 638, 1271, 1295, 1348, 1717
BtsIMutI CAGTG 2 cut(s) 1341, 1392
Cac8I GCNNGC 3 cut(s) 261, 946, 1504
CfoI GCGC 2 cut(s) 103, 1502
Cfr13I GGNCC 2 cut(s) 242, 1247
Csp6I GTAC 2 cut(s) 463, 1311
CviAII CATG 7 cut(s) 125, 296, 478, 518, 919, 1674, 1699
CviQI GTAC 2 cut(s) 463, 1311
DdeI CTNAG 2 cut(s) 106, 803
DpnI GATC 7 cut(s) 207, 561, 698, 720, 739, 993, 1298
DpnII GATC 7 cut(s) 205, 559, 696, 718, 737, 991, 1296
DraI TTTAAA 3 cut(s) 726, 814, 1426
EaeI YGGCCR 1 cut(s) 1259
Ecl136II GAGCTC 1 cut(s) 351
Eco105I TACGTA 1 cut(s) 451
Eco130I CCWWGG 4 cut(s) 238, 654, 918, 1537
Eco24I GRGCYC 1 cut(s) 353
Eco31I GGTCTC 1 cut(s) 1015
Eco32I GATATC 1 cut(s) 887
Eco47I GGWCC 2 cut(s) 242, 1247
Eco47III AGCGCT 1 cut(s) 1501
Eco53kI GAGCTC 1 cut(s) 351
Eco57I CTGAAG 1 cut(s) 329
Eco88I CYCGRG 1 cut(s) 503
EcoICRI GAGCTC 1 cut(s) 351
EcoRI GAATTC 2 cut(s) 748, 1198
EcoRII CCWGG 1 cut(s) 140
EcoRV GATATC 1 cut(s) 887
EcoT14I CCWWGG 4 cut(s) 238, 654, 918, 1537
EcoT22I ATGCAT 2 cut(s) 1483, 1675
EcoT38I GRGCYC 1 cut(s) 353
ErhI CCWWGG 4 cut(s) 238, 654, 918, 1537
FaeI CATG 7 cut(s) 128, 299, 481, 521, 922, 1677, 1702
FaqI GGGAC 2 cut(s) 425, 506
FatI CATG 7 cut(s) 124, 295, 477, 517, 918, 1673, 1698
FauNDI CATATG 2 cut(s) 621, 1450
FbaI TGATCA 1 cut(s) 559
FblI GTMKAC 3 cut(s) 51, 453, 1533
Fnu4HI GCNGC 5 cut(s) 6, 189, 198, 903, 1689
FokI GGATG 6 cut(s) 438, 625, 1258, 1302, 1355, 1724
FriOI GRGCYC 1 cut(s) 353
Fsp4HI GCNGC 5 cut(s) 6, 189, 198, 903, 1689
FspBI CTAG 2 cut(s) 239, 603
GlaI GCGC 2 cut(s) 102, 1501
GluI GCNGC 5 cut(s) 6, 189, 198, 903, 1689
HaeII RGCGCY 2 cut(s) 104, 1503
HaeIII GGCC 1 cut(s) 1261
HapII CCGG 3 cut(s) 1169, 1262, 1404
HhaI GCGC 2 cut(s) 103, 1502
Hin1II CATG 7 cut(s) 128, 299, 481, 521, 922, 1677, 1702
Hin6I GCGC 2 cut(s) 101, 1500
HinP1I GCGC 2 cut(s) 101, 1500
HincII GTYRAC 1 cut(s) 1110
HindII GTYRAC 1 cut(s) 1110
HindIII AAGCTT 1 cut(s) 800
HinfI GANTC 6 cut(s) 380, 474, 606, 1268, 1471, 1622
HpaII CCGG 3 cut(s) 1169, 1262, 1404
HphI GGTGA 2 cut(s) 1085, 1393
Hpy166II GTNNAC 5 cut(s) 34, 52, 454, 1110, 1534
Hpy188I TCNGA 5 cut(s) 109, 210, 348, 790, 1061
Hpy188III TCNNGA 2 cut(s) 700, 851
Hpy8I GTNNAC 5 cut(s) 34, 52, 454, 1110, 1534
HpyAV CCTTC 4 cut(s) 339, 464, 1173, 1333
HpyCH4III ACNGT 5 cut(s) 31, 1107, 1211, 1443, 1553
HpyCH4IV ACGT 2 cut(s) 36, 450
HpyF10VI GCNNNNNNNGC 6 cut(s) 125, 194, 197, 625, 899, 908
HpyF3I CTNAG 2 cut(s) 106, 803
HpySE526I ACGT 2 cut(s) 36, 450
Hsp92II CATG 7 cut(s) 128, 299, 481, 521, 922, 1677, 1702
HspAI GCGC 2 cut(s) 101, 1500
Ksp22I TGATCA 1 cut(s) 559
Kzo9I GATC 7 cut(s) 205, 559, 696, 718, 737, 991, 1296
LmnI GCTCC 1 cut(s) 356
Lsp1109I GCAGC 5 cut(s) 17, 200, 209, 914, 1700
MaeI CTAG 2 cut(s) 239, 603
MaeII ACGT 2 cut(s) 36, 450
MaeIII GTNAC 4 cut(s) 161, 1366, 1399, 1443
MalI GATC 7 cut(s) 207, 561, 698, 720, 739, 993, 1298
MboI GATC 7 cut(s) 205, 559, 696, 718, 737, 991, 1296
MboII GAAGA 2 cut(s) 85, 185
MflI RGATCY 4 cut(s) 205, 737, 991, 1296
MhlI GDGCHC 1 cut(s) 353
MluCI AATT 9 cut(s) 365, 489, 537, 748, 809, 833, 1198, 1543, 1572
MlyI GAGTC 4 cut(s) 374, 615, 1277, 1631
MmeI TCCRAC 2 cut(s) 862, 1540
MnlI CCTC 5 cut(s) 423, 499, 1055, 1285, 1308
Mph1103I ATGCAT 2 cut(s) 1483, 1675
MroXI GAANNNNTTC 1 cut(s) 970
MslI CAYNNNNRTG 2 cut(s) 95, 174
MspA1I CMGCKG 2 cut(s) 8, 191
MspI CCGG 3 cut(s) 1169, 1262, 1404
MspR9I CCNGG 3 cut(s) 142, 1263, 1405
Mva1269I GAATGC 1 cut(s) 946
MvaI CCWGG 1 cut(s) 142
MwoI GCNNNNNNNGC 6 cut(s) 125, 194, 197, 625, 899, 908
NciI CCSGG 2 cut(s) 1263, 1405
NcoI CCATGG 1 cut(s) 918
NdeI CATATG 2 cut(s) 621, 1450
NdeII GATC 7 cut(s) 205, 559, 696, 718, 737, 991, 1296
NlaIII CATG 7 cut(s) 128, 299, 481, 521, 922, 1677, 1702
NlaIV GGNNCC 3 cut(s) 1249, 1495, 1704
NmuCI GTSAC 1 cut(s) 1399
NsiI ATGCAT 2 cut(s) 1483, 1675
PaeR7I CTCGAG 1 cut(s) 503
PcsI WCGNNNNNNNCGW 1 cut(s) 177
PctI GAATGC 1 cut(s) 946
PdmI GAANNNNTTC 1 cut(s) 970
PfeI GAWTC 2 cut(s) 474, 1471
PflMI CCANNNNNTGG 3 cut(s) 1257, 1290, 1307
PkrI GCNGC 5 cut(s) 7, 190, 199, 904, 1690
PleI GAGTC 4 cut(s) 374, 614, 1276, 1630
PpsI GAGTC 4 cut(s) 374, 614, 1276, 1630
Ppu21I YACGTR 1 cut(s) 451
PshAI GACNNNNGTC 2 cut(s) 143, 605
Psp124BI GAGCTC 1 cut(s) 353
Psp6I CCWGG 1 cut(s) 140
PspGI CCWGG 1 cut(s) 140
PspN4I GGNNCC 3 cut(s) 1249, 1495, 1704
PspPI GGNCC 2 cut(s) 242, 1247
PspXI VCTCGAGB 1 cut(s) 503
PsuI RGATCY 4 cut(s) 205, 737, 991, 1296
PvuII CAGCTG 2 cut(s) 8, 191
RsaI GTAC 2 cut(s) 464, 1312
RsaNI GTAC 2 cut(s) 463, 1311
RseI CAYNNNNRTG 2 cut(s) 95, 174
SacI GAGCTC 1 cut(s) 353
SatI GCNGC 5 cut(s) 6, 189, 198, 903, 1689
Sau3AI GATC 7 cut(s) 205, 559, 696, 718, 737, 991, 1296
Sau96I GGNCC 2 cut(s) 242, 1247
SchI GAGTC 4 cut(s) 374, 615, 1277, 1631
ScrFI CCNGG 3 cut(s) 142, 1263, 1405
SduI GDGCHC 1 cut(s) 353
SfcI CTRYAG 2 cut(s) 987, 1431
Sfr274I CTCGAG 1 cut(s) 503
SinI GGWCC 2 cut(s) 242, 1247
SlaI CTCGAG 1 cut(s) 503
SmiMI CAYNNNNRTG 2 cut(s) 95, 174
SmlI CTYRAG 1 cut(s) 503
SmoI CTYRAG 1 cut(s) 503
SnaBI TACGTA 1 cut(s) 451
Sse9I AATT 9 cut(s) 365, 489, 537, 748, 809, 833, 1198, 1543, 1572
SspMI CTAG 2 cut(s) 239, 603
SstI GAGCTC 1 cut(s) 353
StyD4I CCNGG 3 cut(s) 140, 1261, 1403
StyI CCWWGG 4 cut(s) 238, 654, 918, 1537
TaaI ACNGT 5 cut(s) 31, 1107, 1211, 1443, 1553
TaiI ACGT 2 cut(s) 39, 453
TaqI TCGA 4 cut(s) 504, 529, 752, 1528
TasI AATT 9 cut(s) 365, 489, 537, 748, 809, 833, 1198, 1543, 1572
TfiI GAWTC 2 cut(s) 474, 1471
TscAI CASTG 2 cut(s) 1341, 1399
TseFI GTSAC 1 cut(s) 1399
TseI GCWGC 5 cut(s) 5, 188, 197, 902, 1688
Tsp45I GTSAC 1 cut(s) 1399
TspDTI ATGAA 6 cut(s) 75, 692, 761, 963, 1202, 1721
TspGWI ACGGA 2 cut(s) 1267, 1634
TspRI CASTG 2 cut(s) 1341, 1399
Van91I CCANNNNNTGG 3 cut(s) 1257, 1290, 1307
VpaK11BI GGWCC 2 cut(s) 242, 1247
XapI RAATTY 4 cut(s) 748, 809, 1198, 1543
XhoI CTCGAG 1 cut(s) 503
XmaJI CCTAGG 1 cut(s) 238
XmiI GTMKAC 3 cut(s) 51, 453, 1533
XmnI GAANNNNTTC 1 cut(s) 970
XspI CTAG 2 cut(s) 239, 603
Zsp2I ATGCAT 2 cut(s) 1483, 1675
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.