Rroxscaffold_7G00198530

Glutamate receptor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000051
Physical Location & Seq
Reverse (-)
44081427 .. 44085590
4164 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00198530.1

Sequence Viewer

Length: 1947 bp
ATGGGACAGAAGACGAGTGTCTCAGTGAATGTTGGTGTGATTCTTGATGACCTTGAGTCTCTAAGTTCAAAAGTTAGGCTGAGCTGCATCGAATCGGCCATCTCAGACTTTTATAGCTCTCGTGGAAACACTCAAACGAGGCTGGTTCTGAGCATTAGGGACTCCAGAGGTGATGTTGTCGATGCCGCTGCTGCAGGTTGTGTCAGTAAGATTGATTCCTCTCAAGTCAAAGCCATAGGGGCAATTATCAAAGCTTTTGGATGGAGAGAAGCTGTGCCAATCTATATTGACAATGAATACGGCAACGGAGTATTACCATACCTGATGGACGCCTTGCAGATTGTTGAAGCTCGTGTCCCTTATCGAAGTGCCATTTCCGGGTCAGCAACGGATGATCAAATTGAAAAGGAGCTTTTCAAGTTGATGACAATGCAAACTAGAGTCTTCATTGTGCACATGCCCGGCCCTCTAGGCTCTCGGCTTTTTGCTAAAGCACAAAAGCTAGGGATGATGAATGAAGGCTATGTATGGATCATGACAGATGGATTAGATCGATGGAAAAAGCAGTTCCACCAACAAAATCCAACCATCATTGATGTTGAACTAGATGTGTTTGCTCTTTGGGCATATGATGCTGCTTATGCATTAGCCATGGCCGTTGAAGAACTAGGGACTACAAGCTTTGTCTTCCAAACCACCATTTCTTCCACAAACTCATCATCAGATCTAGAGACTTTGGGGGTATCGCAAAATGGTTATCAGCGTAGCCGATCCTTGGCAAGGACGAAATTTAGAGGTCTTGCTGGAAATTTCAGTTTTGATAATGGACAGTTACAATCTTCCATCTTTGAAATATTGAATGTGATTGGTGCTGGAGCAAGAGCAATTGGGTTTTGGACACCTGAAAATGGACTGGTGGTACATGATAATAGCACTAATACAACACCAGATGTTATTACTGGATACTGTATTGACGTCTTTAATGCTGCAATGGAAGGATTACCATATGCCGTTACTTATGACTTCATTCCCTTTGCATATTCAAATGGCAGTTCTGCGGGAACTTATGATGATTTGGTCCATCAGGTTTTCCTTGGGAATTATGATGCAGTGGCAGCAGATTCAACAATTAGAGCAAACAGGTCTCTGTATGTGGACTTTACATTGCCATATACTGAATCTGGTGTAGTAATGGTAGTGCCAATGAAAGATAAAACCCGGATTAAAAATGCATGGATTTTCTTGAAGCCTTTGACATGGGACTTGTGGCTTGCGAGTTTCTTTTTTTCCTTTGTCTTCATTGGTTTTGTGGTTTGGCTTCTTGAACACCGAGTAAATGAAGATTTCCGTGGGCCTCCCTCACATCAAGTTGGCACTGGCCTCTGGTTCTCTTTCTCAACAATGGTTTTTGCACAGCGGGAGAGAGTCGTTAGCAACTTGTCTAGATGTATCAAGGTCAATTCTGCAATTCACCGAGGAGACTTGATGAAGGAACTTGAACGCAAATGGTTCGGGAACGAAACAGCTTGTTCAGTTAGCAACCCCATGGTGTCTGATTCTAGCAGTCTTAGCCTTGATAGGTTTTGGGGTCTGTTTCTGATTGTTGGCGTCACTTCGTTATTAGCCCTCATCATATTTGTAGCCTCATTTATATGGAGTTATCAGCACAAAGGAATTAGGGTTATGCTCAAAGTGTTTGACTGTAAAGACCTGAGCTCCCATACTTTTAAGAAGAAGAATTTGGGTGATCAGTTTGAGCGGTCACCAAGCTGCAGCAGCTACTCAATAAGCCCCTCGAATTTTAGCCATTCAAACCGTACAGATATTACAGAGATGGGGGAAGAAGCAATATTGCATGCTGGTCAAGTTGAATTTCCAGCTAGTGTGCTTGATCTTCCAAACTCAAAAATTCCAACAGCTCCTCAAAGTATTCAAGAGAACAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

648

Amino Acids

71.93

Weight (kDa)

5.65

Isoelectric Point (pI)

30.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ANF_receptor PF01094 72 - 183 4e-29 Receptor family ligand binding region
ANF_receptor PF01094 186 - 290 2.4e-13 Receptor family ligand binding region
Lig_chan-Glu_bd PF10613 311 - 401 3.4e-07 Ligated ion channel L-glutamate- and glycine-binding site
SBP_bac_3 PF00497 354 - 505 2.9e-06 Bacterial extracellular solute-binding proteins, family 3
Lig_chan PF00060 419 - 485 2.6e-10 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 978
Acc36I ACCTGC 1 cut(s) 185
AccBSI CCGCTC 1 cut(s) 1759
AciI CCGC 4 cut(s) 186, 1058, 1417, 1759
AclWI GGATC 2 cut(s) 539, 765
AcoI YGGCCR 2 cut(s) 96, 654
AcsI RAATTY 6 cut(s) 788, 808, 1738, 1798, 1871, 1908
AcyI GRCGYC 3 cut(s) 330, 975, 1608
AfaI GTAC 2 cut(s) 921, 1819
AfiI CCNNNNNNNGG 4 cut(s) 378, 775, 780, 908
AhdI GACNNNNNGTC 1 cut(s) 55
AjuI GAANNNNNNNTTGG 2 cut(s) 1724, 1756
Alw21I GWGCWC 2 cut(s) 456, 1718
Alw26I GTCTC 5 cut(s) 25, 63, 725, 1149, 1473
Alw44I GTGCAC 1 cut(s) 452
AlwI GGATC 2 cut(s) 539, 765
AoxI GGCC 5 cut(s) 96, 463, 654, 1352, 1378
ApaLI GTGCAC 1 cut(s) 452
ApeKI GCWGC 9 cut(s) 84, 188, 191, 635, 986, 1115, 1770, 1773, 1776
ApoI RAATTY 6 cut(s) 788, 808, 1738, 1798, 1871, 1908
AspS9I GGNCC 3 cut(s) 464, 1078, 1352
AsuC2I CCSGG 3 cut(s) 379, 462, 1219
AsuHPI GGTGA 4 cut(s) 182, 1463, 1755, 1757
AvaII GGWCC 1 cut(s) 1078
BaeGI GKGCMC 1 cut(s) 456
BanII GRGCYC 1 cut(s) 1718
BauI CACGAG 2 cut(s) 120, 351
BbsI GAAGAC 4 cut(s) 17, 436, 679, 1288
Bbv12I GWGCWC 2 cut(s) 456, 1718
BbvI GCAGC 9 cut(s) 71, 175, 178, 622, 973, 1127, 1757, 1785, 1788
BccI CCATC 9 cut(s) 107, 255, 319, 536, 549, 596, 851, 1089, 1828
BceAI ACGGC 3 cut(s) 316, 641, 995
BcgI CGANNNNNNTGC 4 cut(s) 170, 204, 1492, 1526
BciVI GTATCC 1 cut(s) 956
BclI TGATCA 2 cut(s) 394, 1747
BcnI CCSGG 3 cut(s) 379, 462, 1219
BcoDI GTCTC 5 cut(s) 25, 63, 725, 1149, 1473
BfaI CTAG 9 cut(s) 438, 470, 503, 605, 668, 728, 1443, 1560, 1881
BfmI CTRYAG 2 cut(s) 192, 1771
BfuAI ACCTGC 1 cut(s) 185
BfuI GTATCC 1 cut(s) 956
BglI GCCNNNNNGGC 2 cut(s) 239, 471
BglII AGATCT 1 cut(s) 724
BlpI GCTNAGC 1 cut(s) 80
Bme1390I CCNGG 3 cut(s) 379, 462, 1219
Bme18I GGWCC 1 cut(s) 1078
BmeRI GACNNNNNGTC 1 cut(s) 55
BmgT120I GGNCC 3 cut(s) 464, 1078, 1352
BmrFI CCNGG 3 cut(s) 379, 462, 1219
BmsI GCATC 4 cut(s) 96, 172, 622, 1096
BoxI GACNNNNGTC 1 cut(s) 17
BpiI GAAGAC 4 cut(s) 17, 436, 679, 1288
BpmI CTGGAG 2 cut(s) 148, 894
Bpu10I CCTNAGC 1 cut(s) 1712
Bpu1102I GCTNAGC 1 cut(s) 80
BpuEI CTTGAG 2 cut(s) 74, 207
BpuMI CCSGG 3 cut(s) 379, 462, 1219
Bsa29I ATCGAT 1 cut(s) 553
BsaHI GRCGYC 3 cut(s) 330, 975, 1608
BsaI GGTCTC 1 cut(s) 1149
BsaJI CCNNGG 6 cut(s) 651, 774, 1093, 1348, 1474, 1545
BsaXI ACNNNNNCTCC 2 cut(s) 1700, 1730
Bsc4I CCNNNNNNNGG 4 cut(s) 378, 775, 780, 908
Bse1I ACTGG 3 cut(s) 918, 964, 1381
Bse3DI GCAATG 2 cut(s) 996, 1163
BseCI ATCGAT 1 cut(s) 553
BseDI CCNNGG 6 cut(s) 651, 774, 1093, 1348, 1474, 1545
BseGI GGATG 3 cut(s) 266, 397, 513
BseLI CCNNNNNNNGG 4 cut(s) 378, 775, 780, 908
BseMI GCAATG 2 cut(s) 996, 1163
BseMII CTCAG 5 cut(s) 36, 71, 117, 140, 1703
BseNI ACTGG 3 cut(s) 918, 964, 1381
BseRI GAGGAG 2 cut(s) 1491, 1911
BseSI GKGCMC 1 cut(s) 456
BseXI GCAGC 9 cut(s) 71, 175, 178, 622, 973, 1127, 1757, 1785, 1788
BshFI GGCC 5 cut(s) 98, 465, 656, 1354, 1380
BshVI ATCGAT 1 cut(s) 553
BsiHKAI GWGCWC 2 cut(s) 456, 1718
BsiSI CCGG 3 cut(s) 378, 462, 1219
BslFI GGGAC 5 cut(s) 18, 173, 341, 685, 1274
BslI CCNNNNNNNGG 4 cut(s) 378, 775, 780, 908
BsmAI GTCTC 5 cut(s) 25, 63, 725, 1149, 1473
BsmFI GGGAC 5 cut(s) 18, 173, 341, 685, 1274
BsnI GGCC 5 cut(s) 98, 465, 656, 1354, 1380
Bso31I GGTCTC 1 cut(s) 1149
Bsp1286I GDGCHC 2 cut(s) 456, 1718
Bsp143I GATC 7 cut(s) 394, 531, 550, 724, 770, 1747, 1891
Bsp1720I GCTNAGC 1 cut(s) 80
Bsp19I CCATGG 2 cut(s) 651, 1545
BspACI CCGC 4 cut(s) 186, 1058, 1417, 1759
BspANI GGCC 5 cut(s) 98, 465, 656, 1354, 1380
BspCNI CTCAG 5 cut(s) 35, 72, 116, 141, 1704
BspDI ATCGAT 1 cut(s) 553
BspHI TCATGA 1 cut(s) 534
BspMAI CTGCAG 2 cut(s) 196, 1775
BspMI ACCTGC 1 cut(s) 185
BspPI GGATC 2 cut(s) 539, 765
BspTNI GGTCTC 1 cut(s) 1149
BsrBI CCGCTC 1 cut(s) 1759
BsrDI GCAATG 2 cut(s) 996, 1163
BsrI ACTGG 3 cut(s) 918, 964, 1381
BssECI CCNNGG 6 cut(s) 651, 774, 1093, 1348, 1474, 1545
BssMI GATC 7 cut(s) 394, 531, 550, 724, 770, 1747, 1891
BssNI GRCGYC 3 cut(s) 330, 975, 1608
BssSI CACGAG 2 cut(s) 120, 351
BssT1I CCWWGG 4 cut(s) 651, 774, 1093, 1545
Bst2BI CACGAG 2 cut(s) 120, 351
Bst4CI ACNGT 4 cut(s) 831, 968, 1703, 1817
BstACI GRCGYC 3 cut(s) 330, 975, 1608
BstAPI GCANNNNNTGC 1 cut(s) 632
BstC8I GCNNGC 2 cut(s) 1272, 1857
BstDEI CTNAG 7 cut(s) 22, 62, 80, 103, 149, 1568, 1712
BstDSI CCRYGG 3 cut(s) 651, 1348, 1545
BstEII GGTNACC 1 cut(s) 1761
BstENI CCTNNNNNAGG 1 cut(s) 778
BstF5I GGATG 3 cut(s) 266, 397, 513
BstKTI GATC 7 cut(s) 397, 534, 553, 727, 773, 1750, 1894
BstMAI GTCTC 5 cut(s) 25, 63, 725, 1149, 1473
BstMBI GATC 7 cut(s) 394, 531, 550, 724, 770, 1747, 1891
BstMWI GCNNNNNNNGC 9 cut(s) 191, 239, 471, 623, 632, 641, 1115, 1569, 1776
BstNSI RCATGY 2 cut(s) 460, 1859
BstPAI GACNNNNGTC 1 cut(s) 17
BstPI GGTNACC 1 cut(s) 1761
BstSCI CCNGG 3 cut(s) 377, 460, 1217
BstSFI CTRYAG 2 cut(s) 192, 1771
BstSLI GKGCMC 1 cut(s) 456
BstV1I GCAGC 9 cut(s) 71, 175, 178, 622, 973, 1127, 1757, 1785, 1788
BstV2I GAAGAC 4 cut(s) 17, 436, 679, 1288
BstX2I RGATCY 1 cut(s) 724
BstYI RGATCY 1 cut(s) 724
Bsu15I ATCGAT 1 cut(s) 553
BsuI GTATCC 1 cut(s) 956
BsuRI GGCC 5 cut(s) 98, 465, 656, 1354, 1380
BsuTUI ATCGAT 1 cut(s) 553
BtgI CCRYGG 3 cut(s) 651, 1348, 1545
BtsCI GGATG 3 cut(s) 266, 397, 513
BtsI GCAGTG 1 cut(s) 1116
BtsIMutI CAGTG 3 cut(s) 30, 1116, 1374
BveI ACCTGC 1 cut(s) 185
Cac8I GCNNGC 2 cut(s) 1272, 1857
CciI TCATGA 1 cut(s) 534
Cfr13I GGNCC 3 cut(s) 464, 1078, 1352
ClaI ATCGAT 1 cut(s) 553
CseI GACGC 2 cut(s) 338, 1597
Csp6I GTAC 2 cut(s) 920, 1818
CviAII CATG 8 cut(s) 457, 535, 652, 923, 1233, 1257, 1546, 1856
CviQI GTAC 2 cut(s) 920, 1818
DdeI CTNAG 7 cut(s) 22, 62, 80, 103, 149, 1568, 1712
DpnI GATC 7 cut(s) 396, 533, 552, 726, 772, 1749, 1893
DpnII GATC 7 cut(s) 394, 531, 550, 724, 770, 1747, 1891
DriI GACNNNNNGTC 1 cut(s) 55
EaeI YGGCCR 2 cut(s) 96, 654
Eam1105I GACNNNNNGTC 1 cut(s) 55
Ecl136II GAGCTC 1 cut(s) 1716
Eco130I CCWWGG 4 cut(s) 651, 774, 1093, 1545
Eco24I GRGCYC 1 cut(s) 1718
Eco31I GGTCTC 1 cut(s) 1149
Eco47I GGWCC 1 cut(s) 1078
Eco53kI GAGCTC 1 cut(s) 1716
Eco91I GGTNACC 1 cut(s) 1761
EcoICRI GAGCTC 1 cut(s) 1716
EcoNI CCTNNNNNAGG 1 cut(s) 778
EcoO65I GGTNACC 1 cut(s) 1761
EcoT14I CCWWGG 4 cut(s) 651, 774, 1093, 1545
EcoT22I ATGCAT 2 cut(s) 646, 1234
EcoT38I GRGCYC 1 cut(s) 1718
ErhI CCWWGG 4 cut(s) 651, 774, 1093, 1545
FaeI CATG 8 cut(s) 460, 538, 655, 926, 1236, 1260, 1549, 1859
FaqI GGGAC 5 cut(s) 18, 173, 341, 685, 1274
FatI CATG 8 cut(s) 456, 534, 651, 922, 1232, 1256, 1545, 1855
FauI CCCGC 2 cut(s) 1051, 1410
FauNDI CATATG 2 cut(s) 628, 1006
FbaI TGATCA 2 cut(s) 394, 1747
FokI GGATG 3 cut(s) 273, 404, 520
FriOI GRGCYC 1 cut(s) 1718
FspBI CTAG 9 cut(s) 438, 470, 503, 605, 668, 728, 1443, 1560, 1881
GsuI CTGGAG 2 cut(s) 148, 894
HaeIII GGCC 5 cut(s) 98, 465, 656, 1354, 1380
HapII CCGG 3 cut(s) 378, 462, 1219
HgaI GACGC 2 cut(s) 338, 1597
Hin1I GRCGYC 3 cut(s) 330, 975, 1608
Hin1II CATG 8 cut(s) 460, 538, 655, 926, 1236, 1260, 1549, 1859
HindIII AAGCTT 2 cut(s) 252, 679
HpaII CCGG 3 cut(s) 378, 462, 1219
HphI GGTGA 4 cut(s) 182, 1463, 1755, 1757
Hpy166II GTNNAC 2 cut(s) 454, 1156
Hpy188I TCNGA 5 cut(s) 106, 150, 724, 1555, 1599
Hpy188III TCNNGA 9 cut(s) 44, 165, 535, 728, 1243, 1322, 1443, 1513, 1934
Hpy8I GTNNAC 2 cut(s) 454, 1156
HpyAV CCTTC 3 cut(s) 512, 989, 1483
HpyCH4III ACNGT 4 cut(s) 831, 968, 1703, 1817
HpyCH4IV ACGT 1 cut(s) 975
HpyF10VI GCNNNNNNNGC 9 cut(s) 191, 239, 471, 623, 632, 641, 1115, 1569, 1776
HpyF3I CTNAG 7 cut(s) 22, 62, 80, 103, 149, 1568, 1712
HpySE526I ACGT 1 cut(s) 975
Hsp92I GRCGYC 3 cut(s) 330, 975, 1608
Hsp92II CATG 8 cut(s) 460, 538, 655, 926, 1236, 1260, 1549, 1859
Ksp22I TGATCA 2 cut(s) 394, 1747
Kzo9I GATC 7 cut(s) 394, 531, 550, 724, 770, 1747, 1891
LmnI GCTCC 4 cut(s) 409, 875, 1721, 1924
Lsp1109I GCAGC 9 cut(s) 71, 175, 178, 622, 973, 1127, 1757, 1785, 1788
LweI GCATC 4 cut(s) 96, 172, 622, 1096
MaeI CTAG 9 cut(s) 438, 470, 503, 605, 668, 728, 1443, 1560, 1881
MaeII ACGT 1 cut(s) 975
MaeIII GTNAC 4 cut(s) 831, 1012, 1609, 1761
MalI GATC 7 cut(s) 396, 533, 552, 726, 772, 1749, 1893
MbiI CCGCTC 1 cut(s) 1759
MboI GATC 7 cut(s) 394, 531, 550, 724, 770, 1747, 1891
MfeI CAATTG 1 cut(s) 885
MflI RGATCY 1 cut(s) 724
MhlI GDGCHC 2 cut(s) 456, 1718
MlyI GAGTC 4 cut(s) 65, 155, 450, 1434
MmeI TCCRAC 2 cut(s) 608, 1937
Mph1103I ATGCAT 2 cut(s) 646, 1234
MseI TTAA 4 cut(s) 981, 1224, 1728, 1945
MslI CAYNNNNRTG 1 cut(s) 1651
MspA1I CMGCKG 2 cut(s) 188, 1417
MspI CCGG 3 cut(s) 378, 462, 1219
MspR9I CCNGG 3 cut(s) 379, 462, 1219
MunI CAATTG 1 cut(s) 885
MwoI GCNNNNNNNGC 9 cut(s) 191, 239, 471, 623, 632, 641, 1115, 1569, 1776
NciI CCSGG 3 cut(s) 379, 462, 1219
NcoI CCATGG 2 cut(s) 651, 1545
NdeI CATATG 2 cut(s) 628, 1006
NdeII GATC 7 cut(s) 394, 531, 550, 724, 770, 1747, 1891
NlaIII CATG 8 cut(s) 460, 538, 655, 926, 1236, 1260, 1549, 1859
NmeAIII GCCGAG 1 cut(s) 457
NmuCI GTSAC 2 cut(s) 1609, 1761
NsiI ATGCAT 2 cut(s) 646, 1234
NspI RCATGY 2 cut(s) 460, 1859
PaeI GCATGC 1 cut(s) 1859
PagI TCATGA 1 cut(s) 534
PfeI GAWTC 6 cut(s) 40, 92, 215, 1121, 1178, 1556
PleI GAGTC 4 cut(s) 64, 155, 449, 1433
PpsI GAGTC 4 cut(s) 64, 155, 449, 1433
PshAI GACNNNNGTC 1 cut(s) 17
Psp124BI GAGCTC 1 cut(s) 1718
PspEI GGTNACC 1 cut(s) 1761
PspPI GGNCC 3 cut(s) 464, 1078, 1352
PstI CTGCAG 2 cut(s) 196, 1775
PsuI RGATCY 1 cut(s) 724
RsaI GTAC 2 cut(s) 921, 1819
RsaNI GTAC 2 cut(s) 920, 1818
RseI CAYNNNNRTG 1 cut(s) 1651
SacI GAGCTC 1 cut(s) 1718
SaqAI TTAA 4 cut(s) 981, 1224, 1728, 1945
Sau3AI GATC 7 cut(s) 394, 531, 550, 724, 770, 1747, 1891
Sau96I GGNCC 3 cut(s) 464, 1078, 1352
SchI GAGTC 4 cut(s) 65, 155, 450, 1434
ScrFI CCNGG 3 cut(s) 379, 462, 1219
SduI GDGCHC 2 cut(s) 456, 1718
SfaNI GCATC 4 cut(s) 96, 172, 622, 1096
SfcI CTRYAG 2 cut(s) 192, 1771
SinI GGWCC 1 cut(s) 1078
SmiMI CAYNNNNRTG 1 cut(s) 1651
SmlI CTYRAG 2 cut(s) 53, 222
SmoI CTYRAG 2 cut(s) 53, 222
SphI GCATGC 1 cut(s) 1859
SsiI CCGC 4 cut(s) 186, 1058, 1417, 1759
SspI AATATT 2 cut(s) 855, 1851
SspMI CTAG 9 cut(s) 438, 470, 503, 605, 668, 728, 1443, 1560, 1881
SstI GAGCTC 1 cut(s) 1718
StyD4I CCNGG 3 cut(s) 377, 460, 1217
StyI CCWWGG 4 cut(s) 651, 774, 1093, 1545
TaaI ACNGT 4 cut(s) 831, 968, 1703, 1817
TaiI ACGT 1 cut(s) 978
TaqI TCGA 5 cut(s) 90, 180, 364, 553, 1796
TauI GCSGC 1 cut(s) 188
TfiI GAWTC 6 cut(s) 40, 92, 215, 1121, 1178, 1556
Tru1I TTAA 4 cut(s) 981, 1224, 1728, 1945
Tru9I TTAA 4 cut(s) 981, 1224, 1728, 1945
TscAI CASTG 3 cut(s) 30, 1116, 1381
TseFI GTSAC 2 cut(s) 1609, 1761
TseI GCWGC 9 cut(s) 84, 188, 191, 635, 986, 1115, 1770, 1773, 1776
Tsp45I GTSAC 2 cut(s) 1609, 1761
TspDTI ATGAA 9 cut(s) 309, 436, 527, 531, 1015, 1220, 1288, 1353, 1502
TspGWI ACGGA 3 cut(s) 321, 404, 1337
TspRI CASTG 3 cut(s) 30, 1116, 1381
VneI GTGCAC 1 cut(s) 452
VpaK11BI GGWCC 1 cut(s) 1078
XagI CCTNNNNNAGG 1 cut(s) 778
XapI RAATTY 6 cut(s) 788, 808, 1738, 1798, 1871, 1908
XbaI TCTAGA 2 cut(s) 727, 1442
XceI RCATGY 2 cut(s) 460, 1859
XspI CTAG 9 cut(s) 438, 470, 503, 605, 668, 728, 1443, 1560, 1881
ZraI GACGTC 1 cut(s) 976
Zsp2I ATGCAT 2 cut(s) 646, 1234
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.