RchiOBHm_Chr1g0345171

Glutamate receptor

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Reverse (-)
37560676 .. 37564130
3455 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ57152

Sequence Viewer

Length: 2961 bp
ATGATCAATAAAAAGTACACTTCCAACCTTTATACGTACTCTCTTTTTATCCTTATCTTCGTTTTGTCATCATGGTTTTCCCCTGCCATGGCACAAAACCAAACCATCCCGGTGAATGTAGGAGTTATTCTTCATGACCTTAATTCACAGGTGGGGAAGATTTTGTTGAGCTGCATTAATATGGCCCTTTCAGACTTCTATGCTTCTCATACTTACTATAACACTAGATTGGTTTTGAACACTAGAGAGTCCAAACGAAATGTTGTCAGTGCAGCTTCTGCAGATCTGATAGAGAATGCACATGTGCAAGCAATCTTAGGACCAGTGACATCAATGGAAGAGAGCTTTGTTATAAGTCTTGGGGAGCAAGCTGAGGTGCCCATTGTATCATTCTCTGCAACAAGCCCTTCTCTTACTTCACTGCGAAGCTCCTACTTTTTTCAGTTTGCACAAAATGACTCGGCCCAAGTAAAAGCATTAAGTGCAGTTGTAAAAGGTTTTGGATGGAGGCAAGTGGTGCTCATATACGTAGACAATGAGTTTGGGGAAGGAGTCGTACCATGTTTAACTGATGCCTTGGAGGAGGTTGATGCCCGTGTACCATACCGGAGCATCGTTTCCCCATCAGCCACAGATAGCCAAATAGTTGAAGAGCTTTACAAGCTAATGACGATGCAAACAAGGGTCTTCATCGTCCACATGACAGCTGATTTGTCATCCAGGCTATTTGCCAAGGCAAAAGAGATTGGAATGATGAGTGAAGGCTATGTTTGGCTCACAACTAACAGCATACCTAATAGTTTGAAGTTTCTGAATTCTTCAGCTATAAATTCCATGCAAGGTGTATTAGGTGTGCAAACTTACATTCCAGCGACTGTAGAGTTTGAAGAATTCAAGCTTCGGTGGAAACAACAATTCCGCAAAGACAATCCAACCATCATTGGTGCTGAGTTGAATATTTTTGCATTGTGGGCTTACGATGCTGCGTTTGCATTGGCCATGGCAATTGAAGAAGTTAGGACTACAAGCTTTGGTTTCCAAAGGAACAATGCTTCCATCAACTCATCAACAGATCTTGAAAGTTTTGAGGTCTCTCAATATGGTCCAAAACTTTGCCAAGCACTGTCACTTACTAGATTTGAAGGCATAGCTGGAAATTTCAGCCTTGTTGATGGGCAGCGTCAAACATCAACTTTTCAGATAGTCAATATAAATGGTCGTGGAGCTAGAACAGTTGGATTTTGGACCTTGAAAAATGGAATCATGAGAAAATTGGGTTCACCATCATCAGTAAACTCGAGCATAAGTTCAACTTCTAAAGGCGATCTTGGACCAATTATATGGCCCGGAGATTCAATCTCTGTTCCCAAAGGATGGGTAAACCCAGCAAACGGCAAGAAGTTGAGAATAGGAGTTCCCGTAAAGGAAGGTTTCACTGAGTTCGTTTCTGTGACAAAAGATCCAAGCACTAACACAACATATGTCACAGGGTTCAGTATTGACGTCTTTAAGGCTGCAGTGGACATATTACCTTATGCTCTTTCTTACGAGTTGATTCCCTTTGCAAATCCTGATGGCAAAATGGCTGGCACTTACAATGATTTGTGCTATCAAGTATATCTTGGGAAGTTTGATGCTGTGGTGGGAGATGAAACAATTAGAGGAAATAGATCATTGTATGTAGATTTTACCATGCCATACACAGAATCTGGTGTTGTGATGGTTGTGCCACTCAAAGACATCAGGAGAAAAAGTGCGTGGGTTTTCTTAAAGCCTTTGACATGGGATCTTTGGCTGACAACCTCTTGTTTCTTTGTCCTTATTGGTTTCGTGGTTTGGGTTCTTGAACACCGAATCAATGCAGATTTTCGTGGCCCTCCCTCATATCAAGTTGGCACGAGCATCTGGTTTTCTTTCTCGACCATGGTTTTTTCACACAGGGAGAGAGTAGTTAGCAACTTGGCTAGATTTGTGATGATTATATGGGTATTTGTTATGCTCATATTGACACAAAGTTACACGGCTAATCTTGCGTCACTATTAACAGTCCAAAAACTTTACCCTGTTGTTACTGATCTAAAGCATTACTTAAGGAATGGGGATACCGTTGGCTACCAAAACAATACATATATTTATGATATCTTAAGAGAAATAGGCTTTGATGAGTCCAAGCTTAAGGCATATAAATCTGTTGAAGAATGTGATGCTCTTCTTTCGAAAGGCAGTGAAAATGGTGGTATTGCAGCTGCTATTGATGAAACCCCCAACATGAAGCTTTTTCTTGCAAAATATTGTTCCAAATATACTATGGTTGGACCAATTTTTAAAACTGATGGCTTTGCCTTTGTCTTTCCAAAAGGTTCTCCTCTTCTTCATGATGTTTCGCAAGCAATCCTAAACGTGACCGAAGGGGATGTTATACTGAACATTGAAAACAAATGGTTCAATAAAGAAGGCAGTTGTCAAGATAACTCCAACCCAGGGGTTTCTAGTAACAGGCTTGGCCTTGAAACCTTTTGGGGCCTATTCCTCATTGCCGGGGTGGCTTCAGTACTCGCCCTCATCATATTTCTAGCTTCCTTCCTTTACGAGCATAGGCACGTTTTGATTCTCACTGATCCAGGAGCCTCTACACGAGGAAAATTTCGAACTATGTTAGAAATTTTTAATGAAAAAGATTTTAGTTCTCATACATTTAAAACCACTCAACGAGATAGAGTCGCTAATGTGGGAGATGCAGTTAATGCCATACTAAACAACTGCTTGGAAATTCCATTGGGAGACAGTTCTGACAGCGCAGATCCAAGTTCACAGTTCATTGGAGAGCAACAAAATAGTACTACGACACCATCTACTGGTCAAGAGCCTGCAGAGGTGAATCCAGCTACTGAGGTTGATATAACAAATGATGGCGAAATGGAAGGCACTCCTGAACGAGCTCAACATTTCTCCGATTGTTAA

Protein Analysis

986

Amino Acids

109.28

Weight (kDa)

5.43

Isoelectric Point (pI)

32.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peripla_BP_6 PF13458 49 - 341 3.2e-17 Periplasmic binding protein
ANF_receptor PF01094 57 - 406 4.1e-77 Receptor family ligand binding region
SBP_bac_3 PF00497 494 - 816 3.4e-07 Bacterial extracellular solute-binding proteins, family 3
Lig_chan PF00060 594 - 849 9.9e-39 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 353
AatII GACGTC 1 cut(s) 1506
AccB1I GGYRCC 1 cut(s) 376
AccB7I CCANNNNNTGG 2 cut(s) 1374, 2855
AccI GTMKAC 1 cut(s) 531
AciI CCGC 1 cut(s) 919
AclWI GGATC 4 cut(s) 1454, 1794, 2612, 2795
AcoI YGGCCR 1 cut(s) 996
AcsI RAATTY 7 cut(s) 814, 829, 890, 1156, 2642, 2661, 2769
AcuI CTGAAG 2 cut(s) 804, 2532
AcyI GRCGYC 1 cut(s) 1503
AfaI GTAC 6 cut(s) 17, 38, 558, 600, 2553, 2839
AfiI CCNNNNNNNGG 5 cut(s) 88, 1374, 1391, 2481, 2855
AflII CTTAAG 3 cut(s) 2089, 2143, 2174
AflIII ACRYGT 1 cut(s) 301
AjnI CCWGG 3 cut(s) 719, 2479, 2620
AloI GAACNNNNNNTCC 2 cut(s) 1037, 1069
Alw21I GWGCWC 2 cut(s) 522, 2941
Alw26I GTCTC 2 cut(s) 1096, 2775
AlwI GGATC 4 cut(s) 1454, 1794, 2612, 2795
AlwNI CAGNNNCTG 4 cut(s) 278, 875, 1709, 2888
Ama87I CYCGRG 1 cut(s) 1297
AoxI GGCC 7 cut(s) 183, 462, 996, 1343, 1873, 2503, 2521
ApeKI GCWGC 7 cut(s) 171, 272, 983, 1177, 1514, 2243, 2246
ApoI RAATTY 7 cut(s) 814, 829, 890, 1156, 2642, 2661, 2769
ArsI GACNNNNNNTTYG 4 cut(s) 524, 556, 694, 726
AseI ATTAAT 1 cut(s) 177
AspLEI GCGC 1 cut(s) 2798
AsuC2I CCSGG 3 cut(s) 110, 1347, 2539
AsuHPI GGTGA 3 cut(s) 124, 1272, 2887
AsuII TTCGAA 2 cut(s) 2216, 2647
AvaI CYCGRG 1 cut(s) 1297
AvaII GGWCC 5 cut(s) 320, 1103, 1245, 1331, 2315
BaeGI GKGCMC 1 cut(s) 381
BalI TGGCCA 1 cut(s) 998
BanI GGYRCC 1 cut(s) 376
BanII GRGCYC 1 cut(s) 2941
BarI GAAGNNNNNNTAC 2 cut(s) 540, 572
BauI CACGAG 2 cut(s) 1897, 2634
BbsI GAAGAC 1 cut(s) 679
Bbv12I GWGCWC 2 cut(s) 522, 2941
BbvCI CCTCAGC 1 cut(s) 372
BbvI GCAGC 7 cut(s) 158, 284, 970, 1189, 1501, 2233, 2255
BceAI ACGGC 2 cut(s) 1408, 2037
BciT130I CCWGG 3 cut(s) 721, 2481, 2622
BciVI GTATCC 1 cut(s) 2095
BclI TGATCA 1 cut(s) 3
BcnI CCSGG 3 cut(s) 110, 1347, 2539
BcoDI GTCTC 2 cut(s) 1096, 2775
BfaI CTAG 7 cut(s) 225, 243, 1134, 1227, 1965, 2490, 2573
BfmI CTRYAG 4 cut(s) 279, 876, 1515, 2868
BfrI CTTAAG 3 cut(s) 2089, 2143, 2174
BfuI GTATCC 1 cut(s) 2095
BglI GCCNNNNNGGC 1 cut(s) 2543
BglII AGATCT 2 cut(s) 283, 1072
BisI GCNGC 7 cut(s) 172, 273, 984, 1178, 1515, 2244, 2247
BlsI GCNGC 7 cut(s) 173, 274, 985, 1179, 1516, 2245, 2248
BmcAI AGTACT 2 cut(s) 2553, 2839
Bme1390I CCNGG 6 cut(s) 110, 721, 1347, 2481, 2539, 2622
Bme18I GGWCC 5 cut(s) 320, 1103, 1245, 1331, 2315
BmeT110I CYCGRG 1 cut(s) 1297
BmiI GGNNCC 3 cut(s) 378, 2522, 2626
BmrFI CCNGG 6 cut(s) 110, 721, 1347, 2481, 2539, 2622
BmsI GCATC 9 cut(s) 562, 580, 621, 663, 970, 1624, 1911, 2194, 2725
BpiI GAAGAC 1 cut(s) 679
Bpu10I CCTNAGC 1 cut(s) 372
Bpu14I TTCGAA 2 cut(s) 2216, 2647
BpuMI CCSGG 3 cut(s) 110, 1347, 2539
BsaAI YACGTR 2 cut(s) 36, 529
BsaHI GRCGYC 1 cut(s) 1503
BsaI GGTCTC 1 cut(s) 1096
BsaJI CCNNGG 8 cut(s) 87, 576, 732, 999, 1923, 2479, 2480, 2538
BsaWI WCCGGW 1 cut(s) 606
BsaXI ACNNNNNCTCC 6 cut(s) 1404, 1434, 1738, 1768, 2724, 2754
Bsc4I CCNNNNNNNGG 5 cut(s) 88, 1374, 1391, 2481, 2855
Bse1I ACTGG 2 cut(s) 323, 2860
Bse3DI GCAATG 1 cut(s) 2532
BseBI CCWGG 3 cut(s) 721, 2481, 2622
BseDI CCNNGG 8 cut(s) 87, 576, 732, 999, 1923, 2479, 2480, 2538
BseGI GGATG 5 cut(s) 105, 509, 716, 1379, 2419
BseLI CCNNNNNNNGG 5 cut(s) 88, 1374, 1391, 2481, 2855
BseMI GCAATG 1 cut(s) 2532
BseMII CTCAG 4 cut(s) 363, 939, 1428, 2880
BseNI ACTGG 2 cut(s) 323, 2860
BseRI GAGGAG 2 cut(s) 596, 2355
BseSI GKGCMC 1 cut(s) 381
BseXI GCAGC 7 cut(s) 158, 284, 970, 1189, 1501, 2233, 2255
BseYI CCCAGC 1 cut(s) 1384
BsgI GTGCAG 2 cut(s) 291, 504
BshFI GGCC 7 cut(s) 185, 464, 998, 1345, 1875, 2505, 2523
BshNI GGYRCC 1 cut(s) 376
BsiHKAI GWGCWC 2 cut(s) 522, 2941
BsiHKCI CYCGRG 1 cut(s) 1297
BsiSI CCGG 4 cut(s) 110, 607, 1347, 2538
BslI CCNNNNNNNGG 5 cut(s) 88, 1374, 1391, 2481, 2855
BsmAI GTCTC 2 cut(s) 1096, 2775
BsmI GAATGC 1 cut(s) 301
BsnI GGCC 7 cut(s) 185, 464, 998, 1345, 1875, 2505, 2523
Bso31I GGTCTC 1 cut(s) 1096
BsoBI CYCGRG 1 cut(s) 1297
Bsp119I TTCGAA 2 cut(s) 2216, 2647
Bsp1286I GDGCHC 3 cut(s) 381, 522, 2941
Bsp19I CCATGG 3 cut(s) 87, 999, 1923
BspACI CCGC 1 cut(s) 919
BspANI GGCC 7 cut(s) 185, 464, 998, 1345, 1875, 2505, 2523
BspCNI CTCAG 4 cut(s) 364, 940, 1429, 2881
BspHI TCATGA 3 cut(s) 133, 1263, 2374
BspLI GGNNCC 3 cut(s) 378, 2522, 2626
BspMAI CTGCAG 3 cut(s) 283, 1519, 2872
BspPI GGATC 4 cut(s) 1454, 1794, 2612, 2795
BspQI GCTCTTC 2 cut(s) 645, 2214
BspT104I TTCGAA 2 cut(s) 2216, 2647
BspT107I GGYRCC 1 cut(s) 376
BspTI CTTAAG 3 cut(s) 2089, 2143, 2174
BspTNI GGTCTC 1 cut(s) 1096
BsrDI GCAATG 1 cut(s) 2532
BsrI ACTGG 2 cut(s) 323, 2860
BssECI CCNNGG 8 cut(s) 87, 576, 732, 999, 1923, 2479, 2480, 2538
BssNI GRCGYC 1 cut(s) 1503
BssSI CACGAG 2 cut(s) 1897, 2634
BssT1I CCWWGG 5 cut(s) 87, 576, 732, 999, 1923
Bst2BI CACGAG 2 cut(s) 1897, 2634
Bst2UI CCWGG 3 cut(s) 721, 2481, 2622
Bst4CI ACNGT 7 cut(s) 877, 1125, 1234, 2047, 2107, 2786, 2814
Bst6I CTCTTC 4 cut(s) 333, 645, 2214, 2373
BstACI GRCGYC 1 cut(s) 1503
BstAFI CTTAAG 3 cut(s) 2089, 2143, 2174
BstAPI GCANNNNNTGC 4 cut(s) 278, 482, 517, 2744
BstBAI YACGTR 2 cut(s) 36, 529
BstBI TTCGAA 2 cut(s) 2216, 2647
BstC8I GCNNGC 5 cut(s) 309, 369, 1588, 2388, 2868
BstDEI CTNAG 5 cut(s) 316, 372, 948, 1437, 2889
BstDSI CCRYGG 3 cut(s) 87, 999, 1923
BstF5I GGATG 5 cut(s) 105, 509, 716, 1379, 2419
BstHHI GCGC 1 cut(s) 2798
BstMAI GTCTC 2 cut(s) 1096, 2775
BstNI CCWGG 3 cut(s) 721, 2481, 2622
BstNSI RCATGY 1 cut(s) 305
BstSCI CCNGG 6 cut(s) 108, 719, 1345, 2479, 2537, 2620
BstSFI CTRYAG 4 cut(s) 279, 876, 1515, 2868
BstSLI GKGCMC 1 cut(s) 381
BstSNI TACGTA 2 cut(s) 36, 529
BstV1I GCAGC 7 cut(s) 158, 284, 970, 1189, 1501, 2233, 2255
BstV2I GAAGAC 1 cut(s) 679
BstX2I RGATCY 5 cut(s) 283, 1072, 1459, 1786, 2800
BstXI CCANNNNNNTGG 1 cut(s) 1341
BstYI RGATCY 5 cut(s) 283, 1072, 1459, 1786, 2800
BsuI GTATCC 1 cut(s) 2095
BsuRI GGCC 7 cut(s) 185, 464, 998, 1345, 1875, 2505, 2523
BtgI CCRYGG 3 cut(s) 87, 999, 1923
BtsCI GGATG 5 cut(s) 105, 509, 716, 1379, 2419
BtsI GCAGTG 3 cut(s) 419, 1524, 2230
BtsIMutI CAGTG 8 cut(s) 274, 330, 419, 1121, 1434, 1524, 2230, 2613
Cac8I GCNNGC 5 cut(s) 309, 369, 1588, 2388, 2868
CaiI CAGNNNCTG 4 cut(s) 278, 875, 1709, 2888
CciI TCATGA 3 cut(s) 133, 1263, 2374
CfoI GCGC 1 cut(s) 2798
CseI GACGC 2 cut(s) 1169, 2022
Csp6I GTAC 6 cut(s) 16, 37, 557, 599, 2552, 2838
CviQI GTAC 6 cut(s) 16, 37, 557, 599, 2552, 2838
DdeI CTNAG 5 cut(s) 316, 372, 948, 1437, 2889
DraI TTTAAA 2 cut(s) 2326, 2698
EaeI YGGCCR 1 cut(s) 996
Eam1104I CTCTTC 4 cut(s) 333, 645, 2214, 2373
EarI CTCTTC 4 cut(s) 333, 645, 2214, 2373
Ecl136II GAGCTC 1 cut(s) 2939
Eco105I TACGTA 2 cut(s) 36, 529
Eco130I CCWWGG 5 cut(s) 87, 576, 732, 999, 1923
Eco24I GRGCYC 1 cut(s) 2941
Eco31I GGTCTC 1 cut(s) 1096
Eco32I GATATC 1 cut(s) 2140
Eco47I GGWCC 5 cut(s) 320, 1103, 1245, 1331, 2315
Eco53kI GAGCTC 1 cut(s) 2939
Eco57I CTGAAG 2 cut(s) 804, 2532
Eco88I CYCGRG 1 cut(s) 1297
EcoICRI GAGCTC 1 cut(s) 2939
EcoO109I RGGNCCY 1 cut(s) 2521
EcoRI GAATTC 2 cut(s) 814, 890
EcoRII CCWGG 3 cut(s) 719, 2479, 2620
EcoRV GATATC 1 cut(s) 2140
EcoT14I CCWWGG 5 cut(s) 87, 576, 732, 999, 1923
EcoT38I GRGCYC 1 cut(s) 2941
ErhI CCWWGG 5 cut(s) 87, 576, 732, 999, 1923
FalI AAGNNNNNCTT 8 cut(s) 1297, 1329, 1311, 1343, 1605, 1637, 2072, 2104
FauNDI CATATG 1 cut(s) 1480
FbaI TGATCA 1 cut(s) 3
FblI GTMKAC 1 cut(s) 531
Fnu4HI GCNGC 7 cut(s) 172, 273, 984, 1178, 1515, 2244, 2247
FokI GGATG 5 cut(s) 92, 516, 703, 1386, 2426
FriOI GRGCYC 1 cut(s) 2941
Fsp4HI GCNGC 7 cut(s) 172, 273, 984, 1178, 1515, 2244, 2247
FspBI CTAG 7 cut(s) 225, 243, 1134, 1227, 1965, 2490, 2573
GlaI GCGC 1 cut(s) 2797
GluI GCNGC 7 cut(s) 172, 273, 984, 1178, 1515, 2244, 2247
GsaI CCCAGC 1 cut(s) 1388
HaeIII GGCC 7 cut(s) 185, 464, 998, 1345, 1875, 2505, 2523
HapII CCGG 4 cut(s) 110, 607, 1347, 2538
HgaI GACGC 2 cut(s) 1169, 2022
HhaI GCGC 1 cut(s) 2798
Hin1I GRCGYC 1 cut(s) 1503
Hin6I GCGC 1 cut(s) 2796
HinP1I GCGC 1 cut(s) 2796
HindIII AAGCTT 4 cut(s) 896, 1027, 2171, 2273
HpaII CCGG 4 cut(s) 110, 607, 1347, 2538
HphI GGTGA 3 cut(s) 124, 1272, 2887
Hpy166II GTNNAC 9 cut(s) 18, 532, 599, 697, 1280, 1294, 1381, 1522, 2810
Hpy188I TCNGA 6 cut(s) 193, 288, 813, 1200, 2791, 2953
Hpy8I GTNNAC 9 cut(s) 18, 532, 599, 697, 1280, 1294, 1381, 1522, 2810
HpyAV CCTTC 9 cut(s) 417, 542, 755, 1136, 1421, 2402, 2447, 2590, 2915
HpyCH4III ACNGT 7 cut(s) 877, 1125, 1234, 2047, 2107, 2786, 2814
HpyCH4IV ACGT 5 cut(s) 35, 528, 1503, 2400, 2601
HpyF3I CTNAG 5 cut(s) 316, 372, 948, 1437, 2889
HpySE526I ACGT 5 cut(s) 35, 528, 1503, 2400, 2601
Hsp92I GRCGYC 1 cut(s) 1503
HspAI GCGC 1 cut(s) 2796
Ksp22I TGATCA 1 cut(s) 3
LguI GCTCTTC 2 cut(s) 645, 2214
LmnI GCTCC 5 cut(s) 364, 434, 609, 1223, 2624
Lsp1109I GCAGC 7 cut(s) 158, 284, 970, 1189, 1501, 2233, 2255
LweI GCATC 9 cut(s) 562, 580, 621, 663, 970, 1624, 1911, 2194, 2725
MaeI CTAG 7 cut(s) 225, 243, 1134, 1227, 1965, 2490, 2573
MaeII ACGT 5 cut(s) 35, 528, 1503, 2400, 2601
MaeIII GTNAC 9 cut(s) 325, 1125, 1450, 1483, 2015, 2034, 2068, 2401, 2492
MfeI CAATTG 1 cut(s) 1005
MflI RGATCY 5 cut(s) 283, 1072, 1459, 1786, 2800
MhlI GDGCHC 3 cut(s) 381, 522, 2941
MlsI TGGCCA 1 cut(s) 998
MluNI TGGCCA 1 cut(s) 998
MlyI GAGTC 5 cut(s) 257, 452, 561, 2174, 2727
MmeI TCCRAC 5 cut(s) 48, 956, 1216, 2293, 2499
Mox20I TGGCCA 1 cut(s) 998
MscI TGGCCA 1 cut(s) 998
MslI CAYNNNNRTG 2 cut(s) 110, 179
Msp20I TGGCCA 1 cut(s) 998
MspA1I CMGCKG 2 cut(s) 707, 2246
MspCI CTTAAG 3 cut(s) 2089, 2143, 2174
MspI CCGG 4 cut(s) 110, 607, 1347, 2538
MspR9I CCNGG 6 cut(s) 110, 721, 1347, 2481, 2539, 2622
MunI CAATTG 1 cut(s) 1005
Mva1269I GAATGC 1 cut(s) 301
MvaI CCWGG 3 cut(s) 721, 2481, 2622
NciI CCSGG 3 cut(s) 110, 1347, 2539
NcoI CCATGG 3 cut(s) 87, 999, 1923
NdeI CATATG 1 cut(s) 1480
NlaIV GGNNCC 3 cut(s) 378, 2522, 2626
NmeAIII GCCGAG 1 cut(s) 440
NmuCI GTSAC 6 cut(s) 325, 1125, 1450, 1483, 2034, 2401
NspI RCATGY 1 cut(s) 305
NspV TTCGAA 2 cut(s) 2216, 2647
PaeR7I CTCGAG 1 cut(s) 1297
PagI TCATGA 3 cut(s) 133, 1263, 2374
PasI CCCWGGG 1 cut(s) 2480
PciI ACATGT 1 cut(s) 301
PciSI GCTCTTC 2 cut(s) 645, 2214
PctI GAATGC 1 cut(s) 301
PfeI GAWTC 7 cut(s) 1260, 1352, 1555, 1706, 1854, 2608, 2878
PflMI CCANNNNNTGG 2 cut(s) 1374, 2855
PfoI TCCNGGA 1 cut(s) 2620
PkrI GCNGC 7 cut(s) 173, 274, 985, 1179, 1516, 2245, 2248
PleI GAGTC 5 cut(s) 256, 452, 560, 2173, 2726
PpsI GAGTC 5 cut(s) 256, 452, 560, 2173, 2726
Ppu21I YACGTR 2 cut(s) 36, 529
PscI ACATGT 1 cut(s) 301
PshBI ATTAAT 1 cut(s) 177
PsiI TTATAA 1 cut(s) 353
Psp124BI GAGCTC 1 cut(s) 2941
Psp6I CCWGG 3 cut(s) 719, 2479, 2620
PspFI CCCAGC 1 cut(s) 1384
PspGI CCWGG 3 cut(s) 719, 2479, 2620
PspN4I GGNNCC 3 cut(s) 378, 2522, 2626
PspXI VCTCGAGB 1 cut(s) 1297
PstI CTGCAG 3 cut(s) 283, 1519, 2872
PstNI CAGNNNCTG 4 cut(s) 278, 875, 1709, 2888
PsuI RGATCY 5 cut(s) 283, 1072, 1459, 1786, 2800
PvuII CAGCTG 2 cut(s) 707, 2246
RsaI GTAC 6 cut(s) 17, 38, 558, 600, 2553, 2839
RsaNI GTAC 6 cut(s) 16, 37, 557, 599, 2552, 2838
RseI CAYNNNNRTG 2 cut(s) 110, 179
SacI GAGCTC 1 cut(s) 2941
SapI GCTCTTC 2 cut(s) 645, 2214
SatI GCNGC 7 cut(s) 172, 273, 984, 1178, 1515, 2244, 2247
ScaI AGTACT 2 cut(s) 2553, 2839
SchI GAGTC 5 cut(s) 257, 452, 561, 2174, 2727
ScrFI CCNGG 6 cut(s) 110, 721, 1347, 2481, 2539, 2622
SduI GDGCHC 3 cut(s) 381, 522, 2941
SfaNI GCATC 9 cut(s) 562, 580, 621, 663, 970, 1624, 1911, 2194, 2725
SfcI CTRYAG 4 cut(s) 279, 876, 1515, 2868
Sfr274I CTCGAG 1 cut(s) 1297
SfuI TTCGAA 2 cut(s) 2216, 2647
SinI GGWCC 5 cut(s) 320, 1103, 1245, 1331, 2315
SlaI CTCGAG 1 cut(s) 1297
SmiMI CAYNNNNRTG 2 cut(s) 110, 179
SmlI CTYRAG 4 cut(s) 1297, 2089, 2143, 2174
SmoI CTYRAG 4 cut(s) 1297, 2089, 2143, 2174
SnaBI TACGTA 2 cut(s) 36, 529
SsiI CCGC 1 cut(s) 919
SspI AATATT 2 cut(s) 958, 2291
SspMI CTAG 7 cut(s) 225, 243, 1134, 1227, 1965, 2490, 2573
SstI GAGCTC 1 cut(s) 2941
StyD4I CCNGG 6 cut(s) 108, 719, 1345, 2479, 2537, 2620
StyI CCWWGG 5 cut(s) 87, 576, 732, 999, 1923
TaaI ACNGT 7 cut(s) 877, 1125, 1234, 2047, 2107, 2786, 2814
TaiI ACGT 5 cut(s) 38, 531, 1506, 2403, 2604
TaqI TCGA 4 cut(s) 1298, 1919, 2216, 2647
TaqII GACCGA 1 cut(s) 2420
TatI WGTACW 3 cut(s) 15, 2551, 2837
TfiI GAWTC 7 cut(s) 1260, 1352, 1555, 1706, 1854, 2608, 2878
TscAI CASTG 8 cut(s) 274, 330, 426, 1128, 1441, 1524, 2230, 2620
TseFI GTSAC 6 cut(s) 325, 1125, 1450, 1483, 2034, 2401
TseI GCWGC 7 cut(s) 171, 272, 983, 1177, 1514, 2243, 2246
Tsp45I GTSAC 6 cut(s) 325, 1125, 1450, 1483, 2034, 2401
TspDTI ATGAA 8 cut(s) 122, 679, 1665, 2271, 2285, 2363, 2685, 2806
TspRI CASTG 8 cut(s) 274, 330, 426, 1128, 1441, 1524, 2230, 2620
Van91I CCANNNNNTGG 2 cut(s) 1374, 2855
Vha464I CTTAAG 3 cut(s) 2089, 2143, 2174
VpaK11BI GGWCC 5 cut(s) 320, 1103, 1245, 1331, 2315
VspI ATTAAT 1 cut(s) 177
XapI RAATTY 7 cut(s) 814, 829, 890, 1156, 2642, 2661, 2769
XceI RCATGY 1 cut(s) 305
XcmI CCANNNNNNNNNTGG 1 cut(s) 2305
XhoI CTCGAG 1 cut(s) 1297
XmiI GTMKAC 1 cut(s) 531
XspI CTAG 7 cut(s) 225, 243, 1134, 1227, 1965, 2490, 2573
ZraI GACGTC 1 cut(s) 1504
ZrmI AGTACT 2 cut(s) 2553, 2839
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.