RLG00000013824

Glutamate receptor

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Reverse (-)
41977334 .. 41980704
3371 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000013824

Sequence Viewer

Length: 2385 bp
ATGGCTCTCGTTGACTTCTATGCGTCTAATGTTCATTACAAGACTAGGGTGGTCTTGAAAGTTAGGGACTCCAAACGAAATGTTGTTCATGCAGCTGCCGCAGCTCTTGATTTGATAAAGAACGAAAAAGTTCGAGCCATCATTGGACCAGTGACGACAATGGAGACGAGCTTCGTTATTAATCTTGGAAACGAAGCTAATGTGCCCATCATATCATTTTCTTCAACAAGCCCTTCTCTTACTTCGATTCGGAGCTCCTACTTTTTCCAATTTGCACAAAATGACTCAATCCAAGTGAAAGTTATAAGTTCCATTGTAAAAGCTTTTGGGTGGAGACAAGTTGTGCCTATCCACATAGACACTGCATACGGCGAGGCAATCATACCATACTTAACTGATGCCTTGGATGAGGTTGGGGCCCGGGTCCCCTACCGTAGTGTCATTTCCCCATCCGCAACAGATGATCAAATTGAAAAAGAGCTTTACAAGTTGATGACAATGCAAACTAGAGTTTTTCTTGTCCACATGACAACCTCACTATGCTCTAGGGTACTTTACAAGGCAAAAGCAATTGGCATGATGAGCGAGGGATATGTTTGGATCATGACCAGTGGGATAACTAATAGATTAAGGATGACGGACGACTTTTCATTCCTCAATTCCATGGACGGAGTATTAGGTGTTCAAACCTATGTCCCAAAAACAAAAGAACTTCATCAAGAGTTCATACCACGGTGGCATCTGCAGTTCCTAAAAGACACTCCAGCTAACAATTTTGCTGCTAACTTGGATGTTTTTGCACTATGGGCTTATGATGCTGCTCATGCACTGGCCATAGCAATTGAAGAAGTGAATTGGAGTACAAGTAACATTGATTTCCAAAAGTCACTTACTGCTCCCAACAACTCGACAGATCTTGAAAGTTTGGCGGTCTCTCAATATGGTCCAAAACTATGCAAAGCACTCTCAACTACTAGATTTAATGGCATTGCTGGAGATTTTAGACTTGTTGATAGGCAACTTCAATCCTCAACTTTTCAGATTGTTAACATAAATGGTGGTGCAACAAGAACAATCGGATTTTGGACACCAGAAAATGGACTACGGAAAAAGTTGGGCTCCTCAGTAAACACAGGAAAAGGTTCAATTTCCAATGGTAATCTGGGACCCATTATATGGCCAGGAGATTCTCTTTCTGTTCCCAAGGGATGGGAGATACCAACAAATGGCAAGAAGTTGAGAATTGCAGTTCCTCAGAAAGTTGGTTTTACTGAGTTCGTTAAGATCACTAAAGATCCAAGCACAAACATAACAGATGTCTCTGGGTTCAGTATTGATGTCTTTGAGGCTGCGCTGGAGATATTGCCATATGCTCTTCCCTATGAATTTATTCCCTTTGCAAAGCCCGATGGCACCACTGCTGGCAATAACAATGATTTTACTTCAATCTCTATATCTTTTTCCTTTTTCCTTTTTAAAGAAAATAACGATTTCAACTGGGCTAGAGTTGTGATGATTATCTGGATCTTTGTTCTACTAGTACTAACAATAAATTACACGGCCAGTCTAACTTCACTATATACCGTCCAGAAATTCCAGCCAACCGTTACTGATATAAAGGATCTATTAAAGAAAGGGGAGAAAGTTGGTCATGTAAGGAATTATGTTCGTGACATGTTGAAGCAAAAAGGTTTTGATGATTCAAAGCTTAAGCGTTTTACAACTGTGGAAGAAATTGATGACGCACTTTCAAAAGGGAGTGCAAATGGTGGAGTGGCTGGTGTTATTGATGAAACTCCCAACCTGAGGCTTTTTCTTGCAAAGTATTGCAACAAATATACCATGGTTGGACCCTTCTTTAGAACTGATGGCTTTGCCTTTGCGTTTCCAAAAGGTTCCCCTTTTCTACAAGATGTTTCACAGGCAGTTCTAAACGTGACCGGGGGAGAGAAGATAATGAAAATTGAAAATAAATGGTTCAAGAAAGAAAGCAGCTGTCAAGACTTGACTAACCCAAACATTAATAGCAATGGTCTTGGTGTTGATAGCTTTTGGGTCTTATTTCTCATTGTGGCGGGGGCTTCAATACTAGCTCTGATAATATTTGTAGTTTCGTTTATTTACAGGCATAAGGTTATCTGGAGTTCAGAAGCCTCTATTTGGTGTAGGATTCAAAAAATGTTAACTATCTTCAATGAAAAAGACCTGAGCTATCATACTTTTAATATCAATGAAAAGGAAGATGAAGTGACTGCCTTACCTAACTCCTCCCCAGAAAGTTCTGTGCACCGGAATTTGAACCAGGGAAATTCAAATTCTGTATTTTCTGGTTCTGGAGAGCAACAAGCAGCAAGGGTCTCCATGAGTAGCTGCTGCAACTCTTGA

Protein Analysis

795

Amino Acids

88.25

Weight (kDa)

8.52

Isoelectric Point (pI)

32.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ANF_receptor PF01094 1 - 353 7.9e-75 Receptor family ligand binding region
Peripla_BP_6 PF13458 15 - 340 8.9e-20 Periplasmic binding protein
Lig_chan PF00060 478 - 694 3.2e-18 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 305
AccB1I GGYRCC 1 cut(s) 1412
AccB7I CCANNNNNTGG 4 cut(s) 1097, 1176, 1209, 1226
AciI CCGC 4 cut(s) 99, 453, 929, 2075
AclWI GGATC 4 cut(s) 608, 1289, 1532, 1629
AcoI YGGCCR 3 cut(s) 831, 1178, 1560
AcsI RAATTY 5 cut(s) 1385, 1592, 2293, 2308, 2314
AfaI GTAC 3 cut(s) 552, 862, 1542
AfiI CCNNNNNNNGG 6 cut(s) 1097, 1176, 1209, 1226, 1806, 2160
AflII CTTAAG 1 cut(s) 1709
AflIII ACRYGT 1 cut(s) 1674
AhlI ACTAGT 1 cut(s) 1537
AjnI CCWGG 2 cut(s) 1180, 2301
Alw21I GWGCWC 2 cut(s) 257, 2289
Alw26I GTCTC 5 cut(s) 158, 328, 937, 1324, 2362
Alw44I GTGCAC 1 cut(s) 2285
AlwI GGATC 4 cut(s) 608, 1289, 1532, 1629
Ama87I CYCGRG 1 cut(s) 420
AoxI GGCC 4 cut(s) 417, 831, 1178, 1560
ApaI GGGCCC 1 cut(s) 421
ApaLI GTGCAC 1 cut(s) 2285
ApoI RAATTY 5 cut(s) 1385, 1592, 2293, 2308, 2314
AseI ATTAAT 2 cut(s) 180, 2022
Asp700I GAANNNNTTC 3 cut(s) 129, 1141, 1389
AspLEI GCGC 1 cut(s) 1354
AspS9I GGNCC 7 cut(s) 146, 417, 418, 424, 944, 1166, 1850
AsuC2I CCSGG 3 cut(s) 421, 422, 1942
AvaI CYCGRG 1 cut(s) 420
AvaII GGWCC 5 cut(s) 146, 424, 944, 1166, 1850
AxyI CCTNAGG 1 cut(s) 1805
BaeGI GKGCMC 3 cut(s) 207, 421, 2289
BalI TGGCCA 2 cut(s) 833, 1180
BanI GGYRCC 1 cut(s) 1412
BanII GRGCYC 3 cut(s) 257, 421, 1121
Bbv12I GWGCWC 2 cut(s) 257, 2289
BccI CCATC 6 cut(s) 146, 215, 457, 1203, 1403, 1862
BceAI ACGGC 2 cut(s) 385, 1575
BciT130I CCWGG 2 cut(s) 1182, 2303
BclI TGATCA 1 cut(s) 463
BcnI CCSGG 3 cut(s) 421, 422, 1942
BcoDI GTCTC 5 cut(s) 158, 328, 937, 1324, 2362
BcuI ACTAGT 1 cut(s) 1537
BfaI CTAG 7 cut(s) 45, 507, 546, 975, 1503, 1538, 2090
BfmI CTRYAG 1 cut(s) 743
BfrI CTTAAG 1 cut(s) 1709
BglII AGATCT 1 cut(s) 913
BmcAI AGTACT 1 cut(s) 1542
Bme1390I CCNGG 5 cut(s) 421, 422, 1182, 1942, 2303
Bme18I GGWCC 5 cut(s) 146, 424, 944, 1166, 1850
BmeT110I CYCGRG 1 cut(s) 420
BmgT120I GGNCC 7 cut(s) 146, 417, 418, 424, 944, 1166, 1850
BmrFI CCNGG 5 cut(s) 421, 422, 1182, 1942, 2303
BmrI ACTGGG 1 cut(s) 1507
BmsI GCATC 3 cut(s) 388, 748, 805
BmuI ACTGGG 1 cut(s) 1507
BpmI CTGGAG 5 cut(s) 747, 1014, 1376, 2161, 2355
Bpu10I CCTNAGC 1 cut(s) 2207
BpuMI CCSGG 3 cut(s) 421, 422, 1942
BsaBI GATNNNNATC 1 cut(s) 1517
BsaI GGTCTC 2 cut(s) 937, 2362
BsaJI CCNNGG 8 cut(s) 402, 420, 663, 731, 1203, 1842, 1941, 2302
BsaWI WCCGGW 1 cut(s) 2289
BsaXI ACNNNNNCTCC 2 cut(s) 850, 880
Bsc4I CCNNNNNNNGG 6 cut(s) 1097, 1176, 1209, 1226, 1806, 2160
Bse1I ACTGG 5 cut(s) 149, 609, 834, 1502, 1563
Bse21I CCTNAGG 1 cut(s) 1805
Bse3DI GCAATG 2 cut(s) 987, 2035
Bse8I GATNNNNATC 1 cut(s) 1517
BseBI CCWGG 2 cut(s) 1182, 2303
BseDI CCNNGG 8 cut(s) 402, 420, 663, 731, 1203, 1842, 1941, 2302
BseGI GGATG 5 cut(s) 412, 449, 639, 796, 1214
BseJI GATNNNNATC 1 cut(s) 1517
BseLI CCNNNNNNNGG 6 cut(s) 1097, 1176, 1209, 1226, 1806, 2160
BseMI GCAATG 2 cut(s) 987, 2035
BseMII CTCAG 5 cut(s) 1137, 1263, 1268, 1796, 2198
BseNI ACTGG 5 cut(s) 149, 609, 834, 1502, 1563
BseRI GAGGAG 2 cut(s) 1111, 2257
BseSI GKGCMC 3 cut(s) 207, 421, 2289
BshFI GGCC 4 cut(s) 419, 833, 1180, 1562
BshNI GGYRCC 1 cut(s) 1412
BsiHKAI GWGCWC 2 cut(s) 257, 2289
BsiHKCI CYCGRG 1 cut(s) 420
BsiSI CCGG 3 cut(s) 421, 1941, 2290
BslFI GGGAC 4 cut(s) 80, 410, 680, 1179
BslI CCNNNNNNNGG 6 cut(s) 1097, 1176, 1209, 1226, 1806, 2160
BsmAI GTCTC 5 cut(s) 158, 328, 937, 1324, 2362
BsmBI CGTCTC 1 cut(s) 158
BsmFI GGGAC 4 cut(s) 80, 410, 680, 1179
BsnI GGCC 4 cut(s) 419, 833, 1180, 1562
Bso31I GGTCTC 2 cut(s) 937, 2362
BsoBI CYCGRG 1 cut(s) 420
Bsp120I GGGCCC 1 cut(s) 417
Bsp1286I GDGCHC 5 cut(s) 207, 257, 421, 1121, 2289
Bsp143I GATC 7 cut(s) 463, 600, 913, 1284, 1294, 1524, 1621
Bsp19I CCATGG 2 cut(s) 663, 1842
BspACI CCGC 4 cut(s) 99, 453, 929, 2075
BspANI GGCC 4 cut(s) 419, 833, 1180, 1562
BspCNI CTCAG 5 cut(s) 1136, 1264, 1267, 1797, 2199
BspHI TCATGA 1 cut(s) 603
BspMAI CTGCAG 1 cut(s) 747
BspPI GGATC 4 cut(s) 608, 1289, 1532, 1629
BspQI GCTCTTC 1 cut(s) 1380
BspT107I GGYRCC 1 cut(s) 1412
BspTI CTTAAG 1 cut(s) 1709
BspTNI GGTCTC 2 cut(s) 937, 2362
BsrDI GCAATG 2 cut(s) 987, 2035
BsrI ACTGG 5 cut(s) 149, 609, 834, 1502, 1563
BssECI CCNNGG 8 cut(s) 402, 420, 663, 731, 1203, 1842, 1941, 2302
BssMI GATC 7 cut(s) 463, 600, 913, 1284, 1294, 1524, 1621
BssT1I CCWWGG 4 cut(s) 402, 663, 1203, 1842
Bst2UI CCWGG 2 cut(s) 1182, 2303
Bst4CI ACNGT 5 cut(s) 434, 735, 1585, 1606, 1726
Bst6I CTCTTC 1 cut(s) 1380
BstAFI CTTAAG 1 cut(s) 1709
BstC8I GCNNGC 1 cut(s) 1423
BstDEI CTNAG 5 cut(s) 1123, 1254, 1272, 1805, 2207
BstDSI CCRYGG 3 cut(s) 663, 731, 1842
BstF5I GGATG 5 cut(s) 412, 449, 639, 796, 1214
BstHHI GCGC 1 cut(s) 1354
BstKTI GATC 7 cut(s) 466, 603, 916, 1287, 1297, 1527, 1624
BstMAI GTCTC 5 cut(s) 158, 328, 937, 1324, 2362
BstMBI GATC 7 cut(s) 463, 600, 913, 1284, 1294, 1524, 1621
BstMWI GCNNNNNNNGC 6 cut(s) 98, 101, 582, 806, 815, 824
BstNI CCWGG 2 cut(s) 1182, 2303
BstNSI RCATGY 1 cut(s) 1678
BstSCI CCNGG 5 cut(s) 419, 420, 1180, 1940, 2301
BstSFI CTRYAG 1 cut(s) 743
BstSLI GKGCMC 3 cut(s) 207, 421, 2289
BstX2I RGATCY 4 cut(s) 913, 1294, 1524, 1621
BstYI RGATCY 4 cut(s) 913, 1294, 1524, 1621
Bsu36I CCTNAGG 1 cut(s) 1805
BsuRI GGCC 4 cut(s) 419, 833, 1180, 1562
BtgI CCRYGG 3 cut(s) 663, 731, 1842
BtsCI GGATG 5 cut(s) 412, 449, 639, 796, 1214
BtsI GCAGTG 2 cut(s) 360, 1416
BtsIMutI CAGTG 5 cut(s) 156, 360, 616, 827, 1416
Cac8I GCNNGC 1 cut(s) 1423
CciI TCATGA 1 cut(s) 603
CfoI GCGC 1 cut(s) 1354
Cfr13I GGNCC 7 cut(s) 146, 417, 418, 424, 944, 1166, 1850
Cfr9I CCCGGG 1 cut(s) 420
CseI GACGC 2 cut(s) 12, 1751
Csp6I GTAC 3 cut(s) 551, 861, 1541
CviQI GTAC 3 cut(s) 551, 861, 1541
DdeI CTNAG 5 cut(s) 1123, 1254, 1272, 1805, 2207
DpnI GATC 7 cut(s) 465, 602, 915, 1286, 1296, 1526, 1623
DpnII GATC 7 cut(s) 463, 600, 913, 1284, 1294, 1524, 1621
DraI TTTAAA 1 cut(s) 1477
EaeI YGGCCR 3 cut(s) 831, 1178, 1560
Eam1104I CTCTTC 1 cut(s) 1380
EarI CTCTTC 1 cut(s) 1380
Ecl136II GAGCTC 1 cut(s) 255
Eco130I CCWWGG 4 cut(s) 402, 663, 1203, 1842
Eco24I GRGCYC 3 cut(s) 257, 421, 1121
Eco31I GGTCTC 2 cut(s) 937, 2362
Eco47I GGWCC 5 cut(s) 146, 424, 944, 1166, 1850
Eco53kI GAGCTC 1 cut(s) 255
Eco81I CCTNAGG 1 cut(s) 1805
Eco88I CYCGRG 1 cut(s) 420
EcoICRI GAGCTC 1 cut(s) 255
EcoO109I RGGNCCY 3 cut(s) 417, 424, 1166
EcoRII CCWGG 2 cut(s) 1180, 2301
EcoT14I CCWWGG 4 cut(s) 402, 663, 1203, 1842
EcoT38I GRGCYC 3 cut(s) 257, 421, 1121
ErhI CCWWGG 4 cut(s) 402, 663, 1203, 1842
Esp3I CGTCTC 1 cut(s) 158
FaqI GGGAC 4 cut(s) 80, 410, 680, 1179
FauI CCCGC 1 cut(s) 2068
FauNDI CATATG 1 cut(s) 1369
FbaI TGATCA 1 cut(s) 463
FokI GGATG 5 cut(s) 419, 436, 646, 803, 1221
FriOI GRGCYC 3 cut(s) 257, 421, 1121
FspBI CTAG 7 cut(s) 45, 507, 546, 975, 1503, 1538, 2090
GlaI GCGC 1 cut(s) 1353
GsuI CTGGAG 5 cut(s) 747, 1014, 1376, 2161, 2355
HaeIII GGCC 4 cut(s) 419, 833, 1180, 1562
HapII CCGG 3 cut(s) 421, 1941, 2290
HgaI GACGC 2 cut(s) 12, 1751
HhaI GCGC 1 cut(s) 1354
Hin6I GCGC 1 cut(s) 1352
HinP1I GCGC 1 cut(s) 1352
HincII GTYRAC 3 cut(s) 13, 1048, 2184
HindII GTYRAC 3 cut(s) 13, 1048, 2184
HindIII AAGCTT 2 cut(s) 321, 1706
HinfI GANTC 6 cut(s) 68, 247, 284, 1187, 1700, 2170
HpaI GTTAAC 2 cut(s) 1048, 2184
HpaII CCGG 3 cut(s) 421, 1941, 2290
Hpy166II GTNNAC 6 cut(s) 13, 523, 1048, 1129, 2184, 2287
Hpy188I TCNGA 6 cut(s) 252, 1041, 1079, 1257, 2097, 2149
Hpy8I GTNNAC 6 cut(s) 13, 523, 1048, 1129, 2184, 2287
HpyAV CCTTC 2 cut(s) 243, 1864
HpyCH4III ACNGT 5 cut(s) 434, 735, 1585, 1606, 1726
HpyCH4IV ACGT 1 cut(s) 1935
HpyF10VI GCNNNNNNNGC 6 cut(s) 98, 101, 582, 806, 815, 824
HpyF3I CTNAG 5 cut(s) 1123, 1254, 1272, 1805, 2207
HpySE526I ACGT 1 cut(s) 1935
HspAI GCGC 1 cut(s) 1352
KflI GGGWCCC 2 cut(s) 424, 1166
Ksp22I TGATCA 1 cut(s) 463
KspAI GTTAAC 2 cut(s) 1048, 2184
Kzo9I GATC 7 cut(s) 463, 600, 913, 1284, 1294, 1524, 1621
LguI GCTCTTC 1 cut(s) 1380
LmnI GCTCC 4 cut(s) 252, 260, 901, 1124
LweI GCATC 3 cut(s) 388, 748, 805
MaeI CTAG 7 cut(s) 45, 507, 546, 975, 1503, 1538, 2090
MaeII ACGT 1 cut(s) 1935
MaeIII GTNAC 7 cut(s) 151, 866, 885, 1606, 1670, 1936, 2248
MalI GATC 7 cut(s) 465, 602, 915, 1286, 1296, 1526, 1623
MboI GATC 7 cut(s) 463, 600, 913, 1284, 1294, 1524, 1621
MboII GAAGA 7 cut(s) 213, 857, 1367, 1742, 1963, 2182, 2252
MfeI CAATTG 2 cut(s) 570, 840
MflI RGATCY 4 cut(s) 913, 1294, 1524, 1621
MhlI GDGCHC 5 cut(s) 207, 257, 421, 1121, 2289
MlsI TGGCCA 2 cut(s) 833, 1180
MluNI TGGCCA 2 cut(s) 833, 1180
MlyI GAGTC 2 cut(s) 62, 278
MmeI TCCRAC 1 cut(s) 1828
Mox20I TGGCCA 2 cut(s) 833, 1180
MroXI GAANNNNTTC 3 cut(s) 129, 1141, 1389
MscI TGGCCA 2 cut(s) 833, 1180
Msp20I TGGCCA 2 cut(s) 833, 1180
MspA1I CMGCKG 2 cut(s) 95, 1995
MspCI CTTAAG 1 cut(s) 1709
MspI CCGG 3 cut(s) 421, 1941, 2290
MspR9I CCNGG 5 cut(s) 421, 422, 1182, 1942, 2303
MunI CAATTG 2 cut(s) 570, 840
MvaI CCWGG 2 cut(s) 1182, 2303
MwoI GCNNNNNNNGC 6 cut(s) 98, 101, 582, 806, 815, 824
NciI CCSGG 3 cut(s) 421, 422, 1942
NcoI CCATGG 2 cut(s) 663, 1842
NdeI CATATG 1 cut(s) 1369
NdeII GATC 7 cut(s) 463, 600, 913, 1284, 1294, 1524, 1621
NmuCI GTSAC 5 cut(s) 151, 885, 1670, 1936, 2248
NspI RCATGY 1 cut(s) 1678
PagI TCATGA 1 cut(s) 603
PciI ACATGT 1 cut(s) 1674
PciSI GCTCTTC 1 cut(s) 1380
PdmI GAANNNNTTC 3 cut(s) 129, 1141, 1389
PfeI GAWTC 4 cut(s) 247, 1187, 1700, 2170
PflMI CCANNNNNTGG 4 cut(s) 1097, 1176, 1209, 1226
PleI GAGTC 2 cut(s) 62, 278
PpsI GAGTC 2 cut(s) 62, 278
PpuMI RGGWCCY 2 cut(s) 424, 1166
PscI ACATGT 1 cut(s) 1674
PshBI ATTAAT 2 cut(s) 180, 2022
PsiI TTATAA 1 cut(s) 305
Psp124BI GAGCTC 1 cut(s) 257
Psp5II RGGWCCY 2 cut(s) 424, 1166
Psp6I CCWGG 2 cut(s) 1180, 2301
PspGI CCWGG 2 cut(s) 1180, 2301
PspOMI GGGCCC 1 cut(s) 417
PspPI GGNCC 7 cut(s) 146, 417, 418, 424, 944, 1166, 1850
PspPPI RGGWCCY 2 cut(s) 424, 1166
PsrI GAACNNNNNNTAC 2 cut(s) 666, 698
PstI CTGCAG 1 cut(s) 747
PsuI RGATCY 4 cut(s) 913, 1294, 1524, 1621
PvuII CAGCTG 2 cut(s) 95, 1995
RsaI GTAC 3 cut(s) 552, 862, 1542
RsaNI GTAC 3 cut(s) 551, 861, 1541
SacI GAGCTC 1 cut(s) 257
SapI GCTCTTC 1 cut(s) 1380
Sau3AI GATC 7 cut(s) 463, 600, 913, 1284, 1294, 1524, 1621
Sau96I GGNCC 7 cut(s) 146, 417, 418, 424, 944, 1166, 1850
ScaI AGTACT 1 cut(s) 1542
SchI GAGTC 2 cut(s) 62, 278
ScrFI CCNGG 5 cut(s) 421, 422, 1182, 1942, 2303
SduI GDGCHC 5 cut(s) 207, 257, 421, 1121, 2289
SfaNI GCATC 3 cut(s) 388, 748, 805
SfcI CTRYAG 1 cut(s) 743
SinI GGWCC 5 cut(s) 146, 424, 944, 1166, 1850
SmaI CCCGGG 1 cut(s) 422
SmlI CTYRAG 1 cut(s) 1709
SmoI CTYRAG 1 cut(s) 1709
SpeI ACTAGT 1 cut(s) 1537
SsiI CCGC 4 cut(s) 99, 453, 929, 2075
SspI AATATT 1 cut(s) 2103
SspMI CTAG 7 cut(s) 45, 507, 546, 975, 1503, 1538, 2090
SstI GAGCTC 1 cut(s) 257
StyD4I CCNGG 5 cut(s) 419, 420, 1180, 1940, 2301
StyI CCWWGG 4 cut(s) 402, 663, 1203, 1842
TaaI ACNGT 5 cut(s) 434, 735, 1585, 1606, 1726
TaiI ACGT 1 cut(s) 1938
TaqI TCGA 3 cut(s) 133, 245, 908
TatI WGTACW 2 cut(s) 860, 1540
TauI GCSGC 1 cut(s) 101
TfiI GAWTC 4 cut(s) 247, 1187, 1700, 2170
TscAI CASTG 5 cut(s) 156, 367, 616, 834, 1423
TseFI GTSAC 5 cut(s) 151, 885, 1670, 1936, 2248
Tsp45I GTSAC 5 cut(s) 151, 885, 1670, 1936, 2248
TspGWI ACGGA 3 cut(s) 653, 684, 1120
TspMI CCCGGG 1 cut(s) 420
TspRI CASTG 5 cut(s) 156, 367, 616, 834, 1423
Van91I CCANNNNNTGG 4 cut(s) 1097, 1176, 1209, 1226
Vha464I CTTAAG 1 cut(s) 1709
VneI GTGCAC 1 cut(s) 2285
VpaK11BI GGWCC 5 cut(s) 146, 424, 944, 1166, 1850
VspI ATTAAT 2 cut(s) 180, 2022
XapI RAATTY 5 cut(s) 1385, 1592, 2293, 2308, 2314
XceI RCATGY 1 cut(s) 1678
XcmI CCANNNNNNNNNTGG 1 cut(s) 1159
XmaI CCCGGG 1 cut(s) 420
XmnI GAANNNNTTC 3 cut(s) 129, 1141, 1389
XspI CTAG 7 cut(s) 45, 507, 546, 975, 1503, 1538, 2090
ZrmI AGTACT 1 cut(s) 1542
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.