Rroxscaffold_7G00198460

Glutamate receptor

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
Physical Location & Seq
Reverse (-)
43927923 .. 43929473
1551 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00198460.1

Sequence Viewer

Length: 1002 bp
ATGGAGGCAAAGTTTGTTGTTAATATTGGAGACCAAGCTCAAGTGCCCCTTTTGACTTTTTCTGCATCAAGTCCTTGTCTTACTTCACTTGGGAGCTCTTTCTTTTTCCGACCTACACAAAATGACTCAATCCAAGTGAAAGCCATAAGTGATATTGTTCTGAACTTTGGATGGAGAAAAGTTGTTCCCATCTATGAAGACACTTCTTATGGGGAGGGAATCATACCATTTTTAATCGATGCCTTGCAAGCAGTTGAAGCTCATGTTCCCTACAGAAGTATAGTTTCTCATTTAGCCACTGATGATCAAATTGAAATTGAGCTTTACAAGTTAATGACGATGCAAACTAGAGTCTTCATTGTTCATATGAATCTTGATATGTGCTCTAAGTTATTTGCCAAGGCAAAAAAGATCGGAATGATGAGTGCAGATTATGTTTGGATCACAACTGGTGGGATATCTAATTGTTTAAATTCGATGAGTTATTCAGACCTAAATTCCATGGAAGGTGTATTAGGTATACAAACAGACATTCGAAGAGCACCAAAGCGTAGAGACTTTAGAAAGCGGTGGGAAATGAAATTCCAACAAGACTATCCAAAATTAACTAAGGTTAAGTTGGATGTTTATGGATATCAAGCTCATGATGCTATCTTTGCACTAGCTATGGCTAGGGCTGTCACTCGGTCGGTTCGAATCGCGTATGGTTACTTTGTCCGCGAAGATGCGGGAGTGGATCCGTACGGTGGGAATTTTGTTCGTCGGATGGAGGAAGAGTTAGGAGGCTTGGTCCGACGTTTTGTTCTTTCGGAGGAGGAGGCACAAGAGATTATTATCCCCGATTATCCAAACCAATGGCAACCTAAGAGGTTTCTTATTGTAGGGCAACTATTGACTACTAAGCCATACAATAAGGAGGCGCTATTGGGTACGTTGACGGCGCGCTCCGGTCGCCGAAGAAATATCATGGGGATAAGTCAAGGGTGTCTCGGTCGCTCTTGA

Protein Analysis

333

Amino Acids

37.77

Weight (kDa)

9.02

Isoelectric Point (pI)

48.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ANF_receptor PF01094 2 - 229 3.8e-48 Receptor family ligand binding region
Peripla_BP_6 PF13458 6 - 208 3.6e-06 Periplasmic binding protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 520
AccII CGCG 3 cut(s) 701, 720, 943
AciI CCGC 3 cut(s) 568, 718, 728
AclWI GGATC 3 cut(s) 449, 731, 744
AcsI RAATTY 4 cut(s) 472, 496, 581, 751
AfaI GTAC 2 cut(s) 743, 931
AfiI CCNNNNNNNGG 1 cut(s) 746
AgsI TTSAA 2 cut(s) 257, 314
AluBI AGCT 6 cut(s) 38, 96, 260, 322, 641, 665
AluI AGCT 6 cut(s) 38, 96, 260, 322, 641, 665
Alw21I GWGCWC 3 cut(s) 98, 386, 544
Alw26I GTCTC 3 cut(s) 24, 549, 992
AlwI GGATC 3 cut(s) 449, 731, 744
ApoI RAATTY 4 cut(s) 472, 496, 581, 751
AspLEI GCGC 3 cut(s) 922, 943, 945
AspS9I GGNCC 1 cut(s) 790
AsuII TTCGAA 2 cut(s) 535, 694
AvaII GGWCC 1 cut(s) 790
BaeGI GKGCMC 1 cut(s) 48
BamHI GGATCC 1 cut(s) 736
BanII GRGCYC 1 cut(s) 98
BbsI GAAGAC 2 cut(s) 204, 346
Bbv12I GWGCWC 3 cut(s) 98, 386, 544
BccI CCATC 3 cut(s) 165, 197, 760
BceAI ACGGC 1 cut(s) 954
BclI TGATCA 1 cut(s) 304
BcoDI GTCTC 3 cut(s) 24, 549, 992
BfaI CTAG 3 cut(s) 348, 662, 672
BfmI CTRYAG 1 cut(s) 271
BfoI RGCGCY 1 cut(s) 923
Bme18I GGWCC 1 cut(s) 790
BmgT120I GGNCC 1 cut(s) 790
BmiI GGNNCC 1 cut(s) 738
BmsI GCATC 5 cut(s) 74, 229, 330, 637, 715
BpiI GAAGAC 2 cut(s) 204, 346
Bpu14I TTCGAA 2 cut(s) 535, 694
BpuEI CTTGAG 1 cut(s) 24
Bsa29I ATCGAT 1 cut(s) 237
BsaBI GATNNNNATC 1 cut(s) 833
BsaI GGTCTC 1 cut(s) 24
BsaJI CCNNGG 2 cut(s) 399, 501
BsaWI WCCGGW 1 cut(s) 947
BsaXI ACNNNNNCTCC 5 cut(s) 26, 761, 774, 791, 804
Bsc4I CCNNNNNNNGG 1 cut(s) 746
Bse1I ACTGG 1 cut(s) 454
Bse8I GATNNNNATC 1 cut(s) 833
BseCI ATCGAT 1 cut(s) 237
BseDI CCNNGG 2 cut(s) 399, 501
BseGI GGATG 3 cut(s) 176, 628, 771
BseJI GATNNNNATC 1 cut(s) 833
BseLI CCNNNNNNNGG 1 cut(s) 746
BseNI ACTGG 1 cut(s) 454
BsePI GCGCGC 1 cut(s) 941
BseRI GAGGAG 2 cut(s) 827, 830
BseSI GKGCMC 1 cut(s) 48
BsgI GTGCAG 1 cut(s) 447
Bsh1236I CGCG 3 cut(s) 701, 720, 943
Bsh1285I CGRYCG 3 cut(s) 689, 952, 994
BshVI ATCGAT 1 cut(s) 237
BsiEI CGRYCG 3 cut(s) 689, 952, 994
BsiHKAI GWGCWC 3 cut(s) 98, 386, 544
BsiSI CCGG 1 cut(s) 948
BsiWI CGTACG 1 cut(s) 741
BslI CCNNNNNNNGG 1 cut(s) 746
BsmAI GTCTC 3 cut(s) 24, 549, 992
Bso31I GGTCTC 1 cut(s) 24
Bsp119I TTCGAA 2 cut(s) 535, 694
Bsp1286I GDGCHC 4 cut(s) 48, 98, 386, 544
Bsp143I GATC 4 cut(s) 304, 411, 441, 736
Bsp19I CCATGG 1 cut(s) 501
BspACI CCGC 3 cut(s) 568, 718, 728
BspDI ATCGAT 1 cut(s) 237
BspFNI CGCG 3 cut(s) 701, 720, 943
BspHI TCATGA 1 cut(s) 643
BspLI GGNNCC 1 cut(s) 738
BspPI GGATC 3 cut(s) 449, 731, 744
BspQI GCTCTTC 1 cut(s) 532
BspT104I TTCGAA 2 cut(s) 535, 694
BspTNI GGTCTC 1 cut(s) 24
BsrI ACTGG 1 cut(s) 454
BssECI CCNNGG 2 cut(s) 399, 501
BssHII GCGCGC 1 cut(s) 941
BssMI GATC 4 cut(s) 304, 411, 441, 736
BssNAI GTATAC 1 cut(s) 521
BssT1I CCWWGG 2 cut(s) 399, 501
Bst1107I GTATAC 1 cut(s) 521
Bst4CI ACNGT 1 cut(s) 746
Bst6I CTCTTC 2 cut(s) 532, 768
BstBI TTCGAA 2 cut(s) 535, 694
BstC8I GCNNGC 2 cut(s) 249, 943
BstDEI CTNAG 4 cut(s) 387, 609, 864, 900
BstDSI CCRYGG 1 cut(s) 501
BstF5I GGATG 3 cut(s) 176, 628, 771
BstFNI CGCG 3 cut(s) 701, 720, 943
BstH2I RGCGCY 1 cut(s) 923
BstHHI GCGC 3 cut(s) 922, 943, 945
BstKTI GATC 4 cut(s) 307, 414, 444, 739
BstMAI GTCTC 3 cut(s) 24, 549, 992
BstMBI GATC 4 cut(s) 304, 411, 441, 736
BstMCI CGRYCG 3 cut(s) 689, 952, 994
BstMWI GCNNNNNNNGC 5 cut(s) 248, 257, 647, 656, 951
BstSFI CTRYAG 1 cut(s) 271
BstSLI GKGCMC 1 cut(s) 48
BstUI CGCG 3 cut(s) 701, 720, 943
BstV2I GAAGAC 2 cut(s) 204, 346
BstX2I RGATCY 1 cut(s) 736
BstXI CCANNNNNNTGG 1 cut(s) 855
BstYI RGATCY 1 cut(s) 736
BstZ17I GTATAC 1 cut(s) 521
Bsu15I ATCGAT 1 cut(s) 237
BsuTUI ATCGAT 1 cut(s) 237
BtgI CCRYGG 1 cut(s) 501
BtsCI GGATG 3 cut(s) 176, 628, 771
BtsIMutI CAGTG 1 cut(s) 297
Cac8I GCNNGC 2 cut(s) 249, 943
CciI TCATGA 1 cut(s) 643
CfoI GCGC 3 cut(s) 922, 943, 945
Cfr13I GGNCC 1 cut(s) 790
ClaI ATCGAT 1 cut(s) 237
Csp6I GTAC 2 cut(s) 742, 930
CviAII CATG 4 cut(s) 263, 502, 644, 967
CviQI GTAC 2 cut(s) 742, 930
DdeI CTNAG 4 cut(s) 387, 609, 864, 900
DpnI GATC 4 cut(s) 306, 413, 443, 738
DpnII GATC 4 cut(s) 304, 411, 441, 736
DraI TTTAAA 1 cut(s) 471
Eam1104I CTCTTC 2 cut(s) 532, 768
EarI CTCTTC 2 cut(s) 532, 768
Ecl136II GAGCTC 1 cut(s) 96
Eco130I CCWWGG 2 cut(s) 399, 501
Eco24I GRGCYC 1 cut(s) 98
Eco31I GGTCTC 1 cut(s) 24
Eco32I GATATC 2 cut(s) 459, 635
Eco47I GGWCC 1 cut(s) 790
Eco53kI GAGCTC 1 cut(s) 96
EcoICRI GAGCTC 1 cut(s) 96
EcoRV GATATC 2 cut(s) 459, 635
EcoT14I CCWWGG 2 cut(s) 399, 501
EcoT38I GRGCYC 1 cut(s) 98
ErhI CCWWGG 2 cut(s) 399, 501
FaeI CATG 4 cut(s) 266, 505, 647, 970
FalI AAGNNNNNCTT 2 cut(s) 33, 65
FatI CATG 4 cut(s) 262, 501, 643, 966
FauI CCCGC 1 cut(s) 721
FauNDI CATATG 1 cut(s) 366
FbaI TGATCA 1 cut(s) 304
FblI GTMKAC 1 cut(s) 520
FokI GGATG 3 cut(s) 183, 635, 778
FriOI GRGCYC 1 cut(s) 98
FspBI CTAG 3 cut(s) 348, 662, 672
GlaI GCGC 3 cut(s) 921, 942, 944
HaeII RGCGCY 1 cut(s) 923
HapII CCGG 1 cut(s) 948
HhaI GCGC 3 cut(s) 922, 943, 945
Hin1II CATG 4 cut(s) 266, 505, 647, 970
Hin6I GCGC 3 cut(s) 920, 941, 943
HinP1I GCGC 3 cut(s) 920, 941, 943
HincII GTYRAC 1 cut(s) 936
HindII GTYRAC 1 cut(s) 936
HinfI GANTC 5 cut(s) 125, 219, 351, 370, 696
HpaII CCGG 1 cut(s) 948
Hpy166II GTNNAC 2 cut(s) 521, 936
Hpy188I TCNGA 7 cut(s) 110, 162, 416, 490, 765, 794, 811
Hpy188III TCNNGA 3 cut(s) 374, 644, 999
Hpy8I GTNNAC 2 cut(s) 521, 936
Hpy99I CGWCG 2 cut(s) 765, 798
HpyAV CCTTC 1 cut(s) 500
HpyCH4III ACNGT 1 cut(s) 746
HpyCH4IV ACGT 2 cut(s) 796, 932
HpyCH4V TGCA 5 cut(s) 65, 247, 343, 428, 659
HpyF10VI GCNNNNNNNGC 5 cut(s) 248, 257, 647, 656, 951
HpyF3I CTNAG 4 cut(s) 387, 609, 864, 900
HpySE526I ACGT 2 cut(s) 796, 932
Hsp92II CATG 4 cut(s) 266, 505, 647, 970
HspAI GCGC 3 cut(s) 920, 941, 943
Ksp22I TGATCA 1 cut(s) 304
Kzo9I GATC 4 cut(s) 304, 411, 441, 736
LguI GCTCTTC 1 cut(s) 532
LmnI GCTCC 2 cut(s) 93, 950
LpnPI CCDG 2 cut(s) 435, 961
LweI GCATC 5 cut(s) 74, 229, 330, 637, 715
MaeI CTAG 3 cut(s) 348, 662, 672
MaeII ACGT 2 cut(s) 796, 932
MaeIII GTNAC 2 cut(s) 679, 707
MalI GATC 4 cut(s) 306, 413, 443, 738
MboI GATC 4 cut(s) 304, 411, 441, 736
MboII GAAGA 6 cut(s) 209, 346, 549, 734, 785, 969
MflI RGATCY 1 cut(s) 736
MhlI GDGCHC 4 cut(s) 48, 98, 386, 544
MluCI AATT 8 cut(s) 309, 315, 463, 472, 496, 581, 602, 751
MlyI GAGTC 2 cut(s) 119, 360
MmeI TCCRAC 5 cut(s) 133, 600, 610, 743, 817
MnlI CCTC 8 cut(s) 208, 763, 776, 805, 808, 811, 861, 910
MseI TTAA 6 cut(s) 21, 233, 332, 470, 605, 615
MspI CCGG 1 cut(s) 948
MvnI CGCG 3 cut(s) 701, 720, 943
MwoI GCNNNNNNNGC 5 cut(s) 248, 257, 647, 656, 951
NcoI CCATGG 1 cut(s) 501
NdeI CATATG 1 cut(s) 366
NdeII GATC 4 cut(s) 304, 411, 441, 736
NlaIII CATG 4 cut(s) 266, 505, 647, 970
NlaIV GGNNCC 1 cut(s) 738
NmuCI GTSAC 1 cut(s) 679
NspV TTCGAA 2 cut(s) 535, 694
PagI TCATGA 1 cut(s) 643
PauI GCGCGC 1 cut(s) 941
PciSI GCTCTTC 1 cut(s) 532
PcsI WCGNNNNNNNCGW 1 cut(s) 691
PfeI GAWTC 3 cut(s) 219, 370, 696
Pfl23II CGTACG 1 cut(s) 741
PleI GAGTC 2 cut(s) 119, 359
PpsI GAGTC 2 cut(s) 119, 359
Psp124BI GAGCTC 1 cut(s) 98
PspLI CGTACG 1 cut(s) 741
PspN4I GGNNCC 1 cut(s) 738
PspPI GGNCC 1 cut(s) 790
PsuI RGATCY 1 cut(s) 736
PteI GCGCGC 1 cut(s) 941
RsaI GTAC 2 cut(s) 743, 931
RsaNI GTAC 2 cut(s) 742, 930
SacI GAGCTC 1 cut(s) 98
SapI GCTCTTC 1 cut(s) 532
SaqAI TTAA 6 cut(s) 21, 233, 332, 470, 605, 615
Sau3AI GATC 4 cut(s) 304, 411, 441, 736
Sau96I GGNCC 1 cut(s) 790
SchI GAGTC 2 cut(s) 119, 360
SduI GDGCHC 4 cut(s) 48, 98, 386, 544
SfaNI GCATC 5 cut(s) 74, 229, 330, 637, 715
SfcI CTRYAG 1 cut(s) 271
SfuI TTCGAA 2 cut(s) 535, 694
SinI GGWCC 1 cut(s) 790
SmlI CTYRAG 1 cut(s) 39
SmoI CTYRAG 1 cut(s) 39
Sse9I AATT 8 cut(s) 309, 315, 463, 472, 496, 581, 602, 751
SsiI CCGC 3 cut(s) 568, 718, 728
SspI AATATT 1 cut(s) 25
SspMI CTAG 3 cut(s) 348, 662, 672
SstI GAGCTC 1 cut(s) 98
StyI CCWWGG 2 cut(s) 399, 501
TaaI ACNGT 1 cut(s) 746
TaiI ACGT 2 cut(s) 799, 935
TaqI TCGA 4 cut(s) 237, 476, 535, 694
TaqII GACCGA 2 cut(s) 675, 980
TasI AATT 8 cut(s) 309, 315, 463, 472, 496, 581, 602, 751
TfiI GAWTC 3 cut(s) 219, 370, 696
Tru1I TTAA 6 cut(s) 21, 233, 332, 470, 605, 615
Tru9I TTAA 6 cut(s) 21, 233, 332, 470, 605, 615
TscAI CASTG 1 cut(s) 304
TseFI GTSAC 1 cut(s) 679
Tsp45I GTSAC 1 cut(s) 679
TspDTI ATGAA 5 cut(s) 210, 346, 353, 383, 593
TspGWI ACGGA 1 cut(s) 729
TspRI CASTG 1 cut(s) 304
VpaK11BI GGWCC 1 cut(s) 790
XapI RAATTY 4 cut(s) 472, 496, 581, 751
XmiI GTMKAC 1 cut(s) 520
XspI CTAG 3 cut(s) 348, 662, 672
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.