Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000893.1

Orthogroup ID

OG0000051

Physical Location & Seq

Genomic Coordinates Forward (+)

6771 .. 10989

Gene Structure 4219 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000893.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2766 bp

atgttaggaaatgaaaccatccccgtcaatgtgggggttgttcttgatgatcttcattcaatggaggggaaggcttggttgagctgtatcaaaatggccctttcagatttctatgcttctcattctcactacaagactaggctggttttgaacgttagggactccaatcaaaacgttgtaggggcagctgctgcagaagtgcaagcaatattagggccagtgacatcaatgcaggcaaactttgttatcaacctgggagaccaagctcatgtccctattatatcattttcggcaacaagcccttctctcacttctctccggagctcctactttttccgatttacacaaaatgattcatcccaagtgaacgccataagtgctattgtaaaaggttttggatggagacaagttgtgcttgtctatatagacaatgattttggggagggagtcatgtcacatataactgatgctctacaagaggttgatgcttttgtcccctaccggagtgccatttccccatcagccacagataatcaaattcttgaagaactgtacaagttgatgaccatgcaaactagagtcttcatagtccacatgacttctgatctatcttctaggctgtttgccaaagctaaagagcttggaatgatgagcgaaggatatgcttggctaaccactaatgagataccaaacagtttaaagtcgatgaaatcttcagtaattcattcgatgcgtggtttactgggtgtacaaacttacgttccaataacaagtgagctcgatgaattcaacaaaaggtggaaacaacaatttcaaaaagagaatccagccatcattgatgctgattatgaagtttttggattatgggcttatgatgctacagttgcactagccatggcagttgaagacgttgggattacaaactctggcttcaaaaactcaaatgcttccttcaactcaacagatcttgatacgcttaaggtatctcaatatggtccaaaacttgctcaatcattgtcaagtactagattcaacggcatagctggagacgttagcctcattgatggtcagcttcaatcatctacttttaagatagtcaatataaatggggatgtagcaagaggagttggattttggacattacaaagtggaatcaagaaaacattgggtcaatcctccgcaaactgttcaacattgaattgcaatcttggcccaattatatggccgggagattccttctctgttcccaagggatgggagattccgacaaatggcaagaagttgagaataggagttccaatgaaggatggttttactgagtttgttaaggtaaccaaagatccaagtaccaacagaacagatatcactgggtttagtatcgacgtgtttaaggctgcggtggaattgctaccatatgctcttccttatgagttgattccatttgcaaagcctgatggcaccagtgcaggcacttacaatgatttagtctatcaggtgtttcttgagacatttgatgctgtggtgggggatacaacaatccgagcaaataggtccttgtatgtggacttttcaatgccgtatacggaatctggtattgtgatggttgtgccaatagtagacactagaagtaaaaatgcatgggctttcttgaaacctttgacatgggacctttggctcacgatttcttgtttcttggtctttattggttttgtggtgtgggttcttgaacatcgaattaatgacgattttcgtggccctcccctacatcaggtcggcaccagcatctggttctctttctccacaatggtttttgcacagagggagaaagtggttagtaacttggccagattcgtgatgataatatgggtatttgtaatgctaatcctgacacaaagttacacagctagtttagcatcactattaactgtccaacaactccaccctattgtcaccgatataaaggatctgttaaggaacggggataccgtcggatacgcagagaatacatacgtttacaatgtcttgagagaagtaggttttgatgattcgaaagttaaggagtttaaatctgcagaagatttggatgctcttctttcgaaaggaagtgcaaatggtgggattgctgctgcaattgatgaaacacccaacatgaaggtttttcttggaaaatattgttccaaatatacaatgattggacccatctttaaaacggatgggtttgcctttgtctttccaaaacgctctccgcttataccagatatttcgcatgcagttctatgtgtgaccgaaggagagaagatacttgactttgaaaataaatggttcaagaaagatagtaactgtgaagacttgagtgccccaaaagtgtctagctatagtcttggccttgagagcttttggggcctattcctcgttgccggagtggcttcaataattgctcttgtcattttttttgcttcattcacatacaggcatagacacatcttggtgcaccctgattcaagagcatcgacatggggaaggattcgggtcatgttcaaaattttcaatgaaaaagacctcgactgtcatacattcaaaagtagtccaccacatgattcagttaaggcaacaccaaacaacttcccagaaagtccacttagctataatacaaaccagactgataggaatcttgtgttctttggagagcaacaaactccatcaacgggtcaagcgtctcctgaagtaaattttgaagagctttcttttgcgtttccagaagcctaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0007154 GO:0007165 GO:0008066 GO:0008150 GO:0008324 GO:0009719 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0043200 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046873 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

921

Amino Acids

102.18

Weight (kDa)

5.56

Isoelectric Point (pI)

30.24

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000051)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca	FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica	MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica	Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis	pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis	RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata	RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora	Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii	Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa	Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha	Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana	Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	1457, 1775
AccB7I	CCANNNNNTGG	2 cut(s)	1254, 1785
AccI	GTMKAC	2 cut(s)	1580, 1617
AccIII	TCCGGA	1 cut(s)	318
AciI	CCGC	3 cut(s)	1179, 1397, 2246
AclI	AACGTT	2 cut(s)	153, 174
AclWI	GGATC	2 cut(s)	1334, 1971
AcoI	YGGCCR	2 cut(s)	1223, 1842
AcsI	RAATTY	4 cut(s)	537, 785, 2541, 2728
AcuI	CTGAAG	2 cut(s)	699, 2742
AfaI	GTAC	4 cut(s)	554, 750, 1024, 1348
AfiI	CCNNNNNNNGG	5 cut(s)	1254, 1271, 1768, 1785, 2705
AflII	CTTAAG	1 cut(s)	977
AflIII	ACRYGT	1 cut(s)	1383
AjiI	CACGTC	1 cut(s)	1384
AjnI	CCWGG	1 cut(s)	252
Alw21I	GWGCWC	3 cut(s)	326, 780, 2493
Alw26I	GTCTC	5 cut(s)	252, 397, 1041, 1499, 2721
Alw44I	GTGCAC	1 cut(s)	2489
AlwI	GGATC	2 cut(s)	1334, 1971
AlwNI	CAGNNNCTG	2 cut(s)	191, 1785
Aor13HI	TCCGGA	1 cut(s)	318
AoxI	GGCC	8 cut(s)	96, 215, 1210, 1223, 1753, 1842, 2383, 2401
ApaLI	GTGCAC	1 cut(s)	2489
ApeKI	GCWGC	6 cut(s)	185, 188, 191, 1394, 2123, 2126
ApoI	RAATTY	4 cut(s)	537, 785, 2541, 2728
ArsI	GACNNNNNNTTYG	2 cut(s)	419, 451
AseI	ATTAAT	1 cut(s)	1737
AspS9I	GGNCC	9 cut(s)	97, 215, 995, 1211, 1551, 1666, 1754, 2195, 2401
AsuC2I	CCSGG	1 cut(s)	1227
AsuHPI	GGTGA	1 cut(s)	1942
AsuII	TTCGAA	2 cut(s)	2048, 2096
AvaII	GGWCC	4 cut(s)	995, 1551, 1666, 2195
BaeGI	GKGCMC	2 cut(s)	2359, 2493
BalI	TGGCCA	1 cut(s)	1844
BanI	GGYRCC	2 cut(s)	1457, 1775
BanII	GRGCYC	2 cut(s)	326, 780
BbsI	GAAGAC	3 cut(s)	574, 912, 2352
Bbv12I	GWGCWC	3 cut(s)	326, 780, 2493
BbvI	GCAGC	6 cut(s)	175, 178, 197, 1381, 2110, 2113
BceAI	ACGGC	2 cut(s)	1051, 1561
BcgI	CGANNNNNNTGC	2 cut(s)	644, 678
BciT130I	CCWGG	1 cut(s)	254
BciVI	GTATCC	3 cut(s)	1522, 1975, 1985
BcnI	CCSGG	1 cut(s)	1227
BcoDI	GTCTC	5 cut(s)	252, 397, 1041, 1499, 2721
BfaI	CTAG	8 cut(s)	138, 576, 615, 890, 1026, 1623, 1905, 2370
BfmI	CTRYAG	4 cut(s)	192, 879, 2070, 2374
BfrI	CTTAAG	1 cut(s)	977
BfuI	GTATCC	3 cut(s)	1522, 1975, 1985
BglI	GCCNNNNNGGC	1 cut(s)	2423
BglII	AGATCT	1 cut(s)	964
BisI	GCNGC	6 cut(s)	186, 189, 192, 1395, 2124, 2127
BlsI	GCNGC	6 cut(s)	187, 190, 193, 1396, 2125, 2128
BmcAI	AGTACT	1 cut(s)	1024
Bme1390I	CCNGG	2 cut(s)	254, 1227
Bme18I	GGWCC	4 cut(s)	995, 1551, 1666, 2195
BmgBI	CACGTC	1 cut(s)	1384
BmgT120I	GGNCC	9 cut(s)	97, 215, 995, 1211, 1551, 1666, 1754, 2195, 2401
BmiI	GGNNCC	5 cut(s)	1459, 1667, 1777, 2197, 2402
BmrFI	CCNGG	2 cut(s)	254, 1227
BmrI	ACTGGG	2 cut(s)	752, 1377
BmuI	ACTGGG	2 cut(s)	752, 1377
BpiI	GAAGAC	3 cut(s)	574, 912, 2352
BpmI	CTGGAG	1 cut(s)	1065
Bpu14I	TTCGAA	2 cut(s)	2048, 2096
BpuEI	CTTGAG	4 cut(s)	1523, 2044, 2371, 2408
BpuMI	CCSGG	1 cut(s)	1227
BsaBI	GATNNNNATC	1 cut(s)	2667
BsaI	GGTCTC	1 cut(s)	252
BsaJI	CCNNGG	3 cut(s)	253, 894, 1248
BsaWI	WCCGGW	2 cut(s)	318, 501
Bsc4I	CCNNNNNNNGG	5 cut(s)	1254, 1271, 1768, 1785, 2705
Bse1I	ACTGG	4 cut(s)	218, 747, 1372, 1461
Bse8I	GATNNNNATC	1 cut(s)	2667
BseAI	TCCGGA	1 cut(s)	318
BseBI	CCWGG	1 cut(s)	254
BseDI	CCNNGG	3 cut(s)	253, 894, 1248
BseGI	GGATG	8 cut(s)	18, 356, 404, 1117, 1259, 1312, 2089, 2218
BseJI	GATNNNNATC	1 cut(s)	2667
BseLI	CCNNNNNNNGG	5 cut(s)	1254, 1271, 1768, 1785, 2705
BseMII	CTCAG	1 cut(s)	1308
BseNI	ACTGG	4 cut(s)	218, 747, 1372, 1461
BseRI	GAGGAG	1 cut(s)	1137
BseSI	GKGCMC	2 cut(s)	2359, 2493
BseXI	GCAGC	6 cut(s)	175, 178, 197, 1381, 2110, 2113
BsgI	GTGCAG	1 cut(s)	1485
BshFI	GGCC	8 cut(s)	98, 217, 1212, 1225, 1755, 1844, 2385, 2403
BshNI	GGYRCC	2 cut(s)	1457, 1775
BsiHKAI	GWGCWC	3 cut(s)	326, 780, 2493
BsiSI	CCGG	4 cut(s)	319, 502, 1226, 2418
BslFI	GGGAC	4 cut(s)	173, 257, 479, 1679
BslI	CCNNNNNNNGG	5 cut(s)	1254, 1271, 1768, 1785, 2705
BsmAI	GTCTC	5 cut(s)	252, 397, 1041, 1499, 2721
BsmBI	CGTCTC	2 cut(s)	1041, 2721
BsmFI	GGGAC	4 cut(s)	173, 257, 479, 1679
BsnI	GGCC	8 cut(s)	98, 217, 1212, 1225, 1755, 1844, 2385, 2403
Bso31I	GGTCTC	1 cut(s)	252
Bsp119I	TTCGAA	2 cut(s)	2048, 2096
Bsp1286I	GDGCHC	4 cut(s)	326, 780, 2359, 2493
Bsp13I	TCCGGA	1 cut(s)	318
Bsp1407I	TGTACA	2 cut(s)	552, 748
Bsp143I	GATC	5 cut(s)	49, 604, 964, 1339, 1963
Bsp19I	CCATGG	1 cut(s)	894
BspACI	CCGC	3 cut(s)	1179, 1397, 2246
BspANI	GGCC	8 cut(s)	98, 217, 1212, 1225, 1755, 1844, 2385, 2403
BspCNI	CTCAG	1 cut(s)	1309
BspEI	TCCGGA	1 cut(s)	318
BspLI	GGNNCC	5 cut(s)	1459, 1667, 1777, 2197, 2402
BspMAI	CTGCAG	2 cut(s)	196, 2074
BspPI	GGATC	2 cut(s)	1334, 1971
BspQI	GCTCTTC	3 cut(s)	1425, 2094, 2730
BspT104I	TTCGAA	2 cut(s)	2048, 2096
BspT107I	GGYRCC	2 cut(s)	1457, 1775
BspTI	CTTAAG	1 cut(s)	977
BspTNI	GGTCTC	1 cut(s)	252
BsrGI	TGTACA	2 cut(s)	552, 748
BsrI	ACTGG	4 cut(s)	218, 747, 1372, 1461
BssECI	CCNNGG	3 cut(s)	253, 894, 1248
BssMI	GATC	5 cut(s)	49, 604, 964, 1339, 1963
BssNAI	GTATAC	1 cut(s)	1581
BssT1I	CCWWGG	2 cut(s)	894, 1248
Bst1107I	GTATAC	1 cut(s)	1581
Bst2UI	CCWGG	1 cut(s)	254
Bst4CI	ACNGT	8 cut(s)	552, 695, 883, 1187, 1927, 1987, 2342, 2567
Bst6I	CTCTTC	3 cut(s)	1425, 2094, 2730
BstAFI	CTTAAG	1 cut(s)	977
BstAPI	GCANNNNNTGC	1 cut(s)	191
BstAUI	TGTACA	2 cut(s)	552, 748
BstBI	TTCGAA	2 cut(s)	2048, 2096
BstC8I	GCNNGC	4 cut(s)	204, 234, 1468, 2268
BstDEI	CTNAG	2 cut(s)	1317, 2639
BstDSI	CCRYGG	1 cut(s)	894
BstEII	GGTNACC	1 cut(s)	1330
BstENI	CCTNNNNNAGG	1 cut(s)	1766
BstF5I	GGATG	8 cut(s)	18, 356, 404, 1117, 1259, 1312, 2089, 2218
BstKTI	GATC	5 cut(s)	52, 607, 967, 1342, 1966
BstMAI	GTCTC	5 cut(s)	252, 397, 1041, 1499, 2721
BstMBI	GATC	5 cut(s)	49, 604, 964, 1339, 1963
BstMWI	GCNNNNNNNGC	9 cut(s)	191, 377, 875, 884, 1209, 1910, 2391, 2400, 2423
BstNI	CCWGG	1 cut(s)	254
BstNSI	RCATGY	1 cut(s)	2270
BstPI	GGTNACC	1 cut(s)	1330
BstSCI	CCNGG	2 cut(s)	252, 1225
BstSFI	CTRYAG	4 cut(s)	192, 879, 2070, 2374
BstSLI	GKGCMC	2 cut(s)	2359, 2493
BstV1I	GCAGC	6 cut(s)	175, 178, 197, 1381, 2110, 2113
BstV2I	GAAGAC	3 cut(s)	574, 912, 2352
BstX2I	RGATCY	3 cut(s)	964, 1339, 1963
BstXI	CCANNNNNNTGG	1 cut(s)	1221
BstYI	RGATCY	3 cut(s)	964, 1339, 1963
BstZ17I	GTATAC	1 cut(s)	1581
BsuI	GTATCC	3 cut(s)	1522, 1975, 1985
BsuRI	GGCC	8 cut(s)	98, 217, 1212, 1225, 1755, 1844, 2385, 2403
BtgI	CCRYGG	1 cut(s)	894
BtrI	CACGTC	1 cut(s)	1384
BtsCI	GGATG	8 cut(s)	18, 356, 404, 1117, 1259, 1312, 2089, 2218
BtsIMutI	CAGTG	3 cut(s)	225, 1365, 1468
Cac8I	GCNNGC	4 cut(s)	204, 234, 1468, 2268
CaiI	CAGNNNCTG	2 cut(s)	191, 1785
Cfr13I	GGNCC	9 cut(s)	97, 215, 995, 1211, 1551, 1666, 1754, 2195, 2401
CseI	GACGC	1 cut(s)	2703
Csp6I	GTAC	4 cut(s)	553, 749, 1023, 1347
CviQI	GTAC	4 cut(s)	553, 749, 1023, 1347
DdeI	CTNAG	2 cut(s)	1317, 2639
DpnI	GATC	5 cut(s)	51, 606, 966, 1341, 1965
DpnII	GATC	5 cut(s)	49, 604, 964, 1339, 1963
DraI	TTTAAA	3 cut(s)	699, 2065, 2206
EaeI	YGGCCR	2 cut(s)	1223, 1842
Eam1104I	CTCTTC	3 cut(s)	1425, 2094, 2730
EarI	CTCTTC	3 cut(s)	1425, 2094, 2730
Ecl136II	GAGCTC	2 cut(s)	324, 778
Eco130I	CCWWGG	2 cut(s)	894, 1248
Eco24I	GRGCYC	2 cut(s)	326, 780
Eco31I	GGTCTC	1 cut(s)	252
Eco32I	GATATC	1 cut(s)	1363
Eco47I	GGWCC	4 cut(s)	995, 1551, 1666, 2195
Eco53kI	GAGCTC	2 cut(s)	324, 778
Eco57I	CTGAAG	2 cut(s)	699, 2742
Eco91I	GGTNACC	1 cut(s)	1330
EcoICRI	GAGCTC	2 cut(s)	324, 778
EcoNI	CCTNNNNNAGG	1 cut(s)	1766
EcoO109I	RGGNCCY	3 cut(s)	1551, 1666, 2401
EcoO65I	GGTNACC	1 cut(s)	1330
EcoRI	GAATTC	1 cut(s)	785
EcoRII	CCWGG	1 cut(s)	252
EcoRV	GATATC	1 cut(s)	1363
EcoT14I	CCWWGG	2 cut(s)	894, 1248
EcoT22I	ATGCAT	1 cut(s)	1639
EcoT38I	GRGCYC	2 cut(s)	326, 780
ErhI	CCWWGG	2 cut(s)	894, 1248
Esp3I	CGTCTC	2 cut(s)	1041, 2721
FalI	AAGNNNNNCTT	2 cut(s)	399, 431
FaqI	GGGAC	4 cut(s)	173, 257, 479, 1679
FauNDI	CATATG	1 cut(s)	1414
FblI	GTMKAC	2 cut(s)	1580, 1617
Fnu4HI	GCNGC	6 cut(s)	186, 189, 192, 1395, 2124, 2127
FokI	GGATG	8 cut(s)	5, 343, 411, 1124, 1266, 1319, 2096, 2225
FriOI	GRGCYC	2 cut(s)	326, 780
Fsp4HI	GCNGC	6 cut(s)	186, 189, 192, 1395, 2124, 2127
FspBI	CTAG	8 cut(s)	138, 576, 615, 890, 1026, 1623, 1905, 2370
GluI	GCNGC	6 cut(s)	186, 189, 192, 1395, 2124, 2127
GsuI	CTGGAG	1 cut(s)	1065
HaeIII	GGCC	8 cut(s)	98, 217, 1212, 1225, 1755, 1844, 2385, 2403
HapII	CCGG	4 cut(s)	319, 502, 1226, 2418
HgaI	GACGC	1 cut(s)	2703
HpaII	CCGG	4 cut(s)	319, 502, 1226, 2418
HphI	GGTGA	1 cut(s)	1942
Hpy188I	TCNGA	6 cut(s)	106, 338, 604, 1266, 1541, 1991
Hpy99I	CGWCG	2 cut(s)	1385, 1991
HpyAV	CCTTC	9 cut(s)	64, 312, 650, 961, 1246, 1297, 2146, 2282, 2514
HpyCH4III	ACNGT	8 cut(s)	552, 695, 883, 1187, 1927, 1987, 2342, 2567
HpyCH4IV	ACGT	7 cut(s)	153, 174, 759, 909, 1050, 1383, 2010
HpyF10VI	GCNNNNNNNGC	9 cut(s)	191, 377, 875, 884, 1209, 1910, 2391, 2400, 2423
HpyF3I	CTNAG	2 cut(s)	1317, 2639
HpySE526I	ACGT	7 cut(s)	153, 174, 759, 909, 1050, 1383, 2010
Kpn2I	TCCGGA	1 cut(s)	318
Kzo9I	GATC	5 cut(s)	49, 604, 964, 1339, 1963
LguI	GCTCTTC	3 cut(s)	1425, 2094, 2730
LmnI	GCTCC	2 cut(s)	321, 329
Lsp1109I	GCAGC	6 cut(s)	175, 178, 197, 1381, 2110, 2113
MaeI	CTAG	8 cut(s)	138, 576, 615, 890, 1026, 1623, 1905, 2370
MaeII	ACGT	7 cut(s)	153, 174, 759, 909, 1050, 1383, 2010
MaeIII	GTNAC	8 cut(s)	220, 453, 1330, 1835, 1895, 1948, 2281, 2336
MalI	GATC	5 cut(s)	51, 606, 966, 1341, 1965
MboI	GATC	5 cut(s)	49, 604, 964, 1339, 1963
MfeI	CAATTG	1 cut(s)	2130
MflI	RGATCY	3 cut(s)	964, 1339, 1963
MhlI	GDGCHC	4 cut(s)	326, 780, 2359, 2493
MlsI	TGGCCA	1 cut(s)	1844
MluNI	TGGCCA	1 cut(s)	1844
MlyI	GAGTC	3 cut(s)	155, 456, 588
MmeI	TCCRAC	4 cut(s)	1108, 1289, 1954, 1969
Mox20I	TGGCCA	1 cut(s)	1844
Mph1103I	ATGCAT	1 cut(s)	1639
MroI	TCCGGA	1 cut(s)	318
MscI	TGGCCA	1 cut(s)	1844
MslI	CAYNNNNRTG	2 cut(s)	2486, 2512
Msp20I	TGGCCA	1 cut(s)	1844
MspA1I	CMGCKG	1 cut(s)	188
MspCI	CTTAAG	1 cut(s)	977
MspI	CCGG	4 cut(s)	319, 502, 1226, 2418
MspR9I	CCNGG	2 cut(s)	254, 1227
MunI	CAATTG	1 cut(s)	2130
MvaI	CCWGG	1 cut(s)	254
MwoI	GCNNNNNNNGC	9 cut(s)	191, 377, 875, 884, 1209, 1910, 2391, 2400, 2423
NciI	CCSGG	1 cut(s)	1227
NcoI	CCATGG	1 cut(s)	894
NdeI	CATATG	1 cut(s)	1414
NdeII	GATC	5 cut(s)	49, 604, 964, 1339, 1963
NlaIV	GGNNCC	5 cut(s)	1459, 1667, 1777, 2197, 2402
NmuCI	GTSAC	4 cut(s)	220, 453, 1948, 2281
NsiI	ATGCAT	1 cut(s)	1639
NspI	RCATGY	1 cut(s)	2270
NspV	TTCGAA	2 cut(s)	2048, 2096
PaeI	GCATGC	1 cut(s)	2270
PciSI	GCTCTTC	3 cut(s)	1425, 2094, 2730
PcsI	WCGNNNNNNNCGW	2 cut(s)	1983, 2711
PflMI	CCANNNNNTGG	2 cut(s)	1254, 1785
PkrI	GCNGC	6 cut(s)	187, 190, 193, 1396, 2125, 2128
PleI	GAGTC	3 cut(s)	155, 455, 587
PpsI	GAGTC	3 cut(s)	155, 455, 587
PpuMI	RGGWCCY	2 cut(s)	1551, 1666
PshBI	ATTAAT	1 cut(s)	1737
Psp124BI	GAGCTC	2 cut(s)	326, 780
Psp1406I	AACGTT	2 cut(s)	153, 174
Psp5II	RGGWCCY	2 cut(s)	1551, 1666
Psp6I	CCWGG	1 cut(s)	252
PspEI	GGTNACC	1 cut(s)	1330
PspGI	CCWGG	1 cut(s)	252
PspN4I	GGNNCC	5 cut(s)	1459, 1667, 1777, 2197, 2402
PspPI	GGNCC	9 cut(s)	97, 215, 995, 1211, 1551, 1666, 1754, 2195, 2401
PspPPI	RGGWCCY	2 cut(s)	1551, 1666
PstI	CTGCAG	2 cut(s)	196, 2074
PstNI	CAGNNNCTG	2 cut(s)	191, 1785
PsuI	RGATCY	3 cut(s)	964, 1339, 1963
PvuII	CAGCTG	1 cut(s)	188
RsaI	GTAC	4 cut(s)	554, 750, 1024, 1348
RsaNI	GTAC	4 cut(s)	553, 749, 1023, 1347
RseI	CAYNNNNRTG	2 cut(s)	2486, 2512
SacI	GAGCTC	2 cut(s)	326, 780
SapI	GCTCTTC	3 cut(s)	1425, 2094, 2730
SatI	GCNGC	6 cut(s)	186, 189, 192, 1395, 2124, 2127
Sau3AI	GATC	5 cut(s)	49, 604, 964, 1339, 1963
Sau96I	GGNCC	9 cut(s)	97, 215, 995, 1211, 1551, 1666, 1754, 2195, 2401
ScaI	AGTACT	1 cut(s)	1024
SchI	GAGTC	3 cut(s)	155, 456, 588
ScrFI	CCNGG	2 cut(s)	254, 1227
SduI	GDGCHC	4 cut(s)	326, 780, 2359, 2493
SfcI	CTRYAG	4 cut(s)	192, 879, 2070, 2374
SfuI	TTCGAA	2 cut(s)	2048, 2096
SinI	GGWCC	4 cut(s)	995, 1551, 1666, 2195
SmiMI	CAYNNNNRTG	2 cut(s)	2486, 2512
SmlI	CTYRAG	5 cut(s)	977, 1502, 2023, 2350, 2387
SmoI	CTYRAG	5 cut(s)	977, 1502, 2023, 2350, 2387
SphI	GCATGC	1 cut(s)	2270
SsiI	CCGC	3 cut(s)	1179, 1397, 2246
SspI	AATATT	2 cut(s)	210, 2171
SspMI	CTAG	8 cut(s)	138, 576, 615, 890, 1026, 1623, 1905, 2370
SstI	GAGCTC	2 cut(s)	326, 780
StyD4I	CCNGG	2 cut(s)	252, 1225
StyI	CCWWGG	2 cut(s)	894, 1248
TaaI	ACNGT	8 cut(s)	552, 695, 883, 1187, 1927, 1987, 2342, 2567
TaiI	ACGT	7 cut(s)	156, 177, 762, 912, 1053, 1386, 2013
TaqI	TCGA	9 cut(s)	704, 728, 780, 1380, 1732, 2048, 2096, 2510, 2562
TaqII	GACCGA	1 cut(s)	2300
TatI	WGTACW	3 cut(s)	552, 748, 1022
TscAI	CASTG	3 cut(s)	225, 1372, 1468
TseFI	GTSAC	4 cut(s)	220, 453, 1948, 2281
TseI	GCWGC	6 cut(s)	185, 188, 191, 1394, 2123, 2126
Tsp45I	GTSAC	4 cut(s)	220, 453, 1948, 2281
TspGWI	ACGGA	2 cut(s)	1598, 2225
TspRI	CASTG	3 cut(s)	225, 1372, 1468
Van91I	CCANNNNNTGG	2 cut(s)	1254, 1785
Vha464I	CTTAAG	1 cut(s)	977
VneI	GTGCAC	1 cut(s)	2489
VpaK11BI	GGWCC	4 cut(s)	995, 1551, 1666, 2195
VspI	ATTAAT	1 cut(s)	1737
XagI	CCTNNNNNAGG	1 cut(s)	1766
XapI	RAATTY	4 cut(s)	537, 785, 2541, 2728
XceI	RCATGY	1 cut(s)	2270
XmiI	GTMKAC	2 cut(s)	1580, 1617
XspI	CTAG	8 cut(s)	138, 576, 615, 890, 1026, 1623, 1905, 2370
ZrmI	AGTACT	1 cut(s)	1024
Zsp2I	ATGCAT	1 cut(s)	1639

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.