Rh6DG161800

Glutamate receptor

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
Physical Location & Seq
Forward (+)
24304695 .. 24309488
4794 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG161800.1

Sequence Viewer

Length: 1851 bp
ATGTCCCTCTTTGTCTTGCACCCACTACAGTATTCAACGAAGTCTTCAAAGCTGTTTGCCAAAGCTAAAGAGCTTGGAATGATGAGAGAAGGATATGCTTGGCTAACCACTAATGAGATACCAAACAGTTTAAAGTCGATGAAATCTTCAGTAATCCATTCGATGCGTGGTTTACTGGGTGTACAAACTTACGTTCCAATAACAAGTGAGCTCGATGAATTCAACAAAAGGTGGAAACAACAATTTCAAAAAGAGAATCCAGCCATCGTTGATGCTGATTATGAAGTTTTTGGATTATGGGCTTATGATGCTACAGTTGCACTAGCCATGGCAGTTGAAGACGTTGGGATTACAAACTCTGGCTTCAAAAACTCAAATGCTTCCTTCAACTCAACAGATCTTGATACGCTTAAGGTAACCAAAGATCCAAGTACCAACAGAACAGATATCACTGGGTTTAGTATCGACGTGTTTAAGGCTGCGGTGGAATTGTTACCATATGCTCTTCCTTATGAGTTGATTCCATTTGCAAAGCCTGATGGCACCAGTGCAGGCACTTACAATGATTTAGTCTATCAAGTGTTTCTTGAGACATTTGATGCTGTGGTGGGGGATACAACAATCCGAGCAAATAGGTCCTTGTATGTGGACTTTTCAATGCCGTATACGGAATCTGGTATTGTGATGGTTGTGCCAATAGTAGACACTAGAAGTAAAAATGCATGGGCTTTCTTGAAACCTTTGACATGGGACCTTTGGCTCACGATTTCTTGTTTCTTGGTCTTTATTGGTTTTGTGGTGTGGGTTCTTGAACATCGAATTAATGACGATTTTCGTGGCCCTGCCCTACATCAGGTCGGCACCAGCATCTGGTTCTCTTTCTCCACAATGGTTTTTGCACAGAGGGAGAAAGTGGTTAGTAACTTGGCCAGATTCGTGATGATAATATGGGTATTTGTGATGCTAATCCTCACACAAAGTTACACGGCTAGTTTAGCATCACTATTAACTGTTCAACAACTCCACCCTATTGTCACCGATATAAAGGATCTGTTAAGGAACGGGGATACCGTCGGATATGCAGAGAATACCTACGTTTACAATGTCTTGAGAGAAGTAGGTTTTGATGATTCAAAACTTAAGGAGTTTAAATCTACAGAAGATTTGGATGCTCTTCTTTCGAAAGGAAGTGCAAATGGTGGGATTGCTGCTGCAATTGATGAAACACCCAACATGAAGGTTTTTCTTGGAAAATATTGCTCCAAATATACAATGATTGGACCCATCTTTAAAACGGATGGATTTGCCTTTGTCTTTCCAAAACGCTCCCCGCTTATACCAGATATTTCGCATGCAGTTCTAAGCGTGACCGAAGGAGAGAAGATACTTGACTTTGAAAATAAATGGTTCAAGAAAGATAGTAACTGTGAAGACTTGAGTGCCCCAAAAGTGTCTAGCTATAGTCTTGGCCTTGAGAGCTTTTGGGGCCTATTCCTCGTTGCCGGAGTGGCTTCAATAATTGCTCTTGTCATTTTTTTTGCTTCATTCACATACAGGCATAGACACATCTTGGTGCACCCTGATTCAAGAGCATCGACATGGGGAAGGATTCGGGTCATGTTCAAAATTTTCAATGAAAAAGACCTCGACTGTCATACATTCAAAAGTAGTCCACCACATGATTCAGTTAAGGCGTCACCAAACAACTTCCCAGAAAGTCCACTTAGCTATAATACAAACCAGACTGATAGGAATCTTGTGTTCTTTGGAGAGCAACAAACTCCATCAACGGGTCAAGCGTCTCCTGAAGTAAATTTTGAAGAGCTTTCTTTTGCATTTCCAGAAGCCTAA

Protein Analysis

616

Amino Acids

69.16

Weight (kDa)

5.5

Isoelectric Point (pI)

26.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ANF_receptor PF01094 12 - 138 4.3e-17 Receptor family ligand binding region
Lig_chan-Glu_bd PF10613 144 - 231 7.8e-07 Ligated ion channel L-glutamate- and glycine-binding site
Lig_chan PF00060 249 - 504 5.1e-38 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 542, 860
AccB7I CCANNNNNTGG 1 cut(s) 870
AccI GTMKAC 2 cut(s) 665, 702
AciI CCGC 2 cut(s) 482, 1331
AclWI GGATC 2 cut(s) 419, 1056
AcoI YGGCCR 1 cut(s) 927
AcsI RAATTY 3 cut(s) 218, 1626, 1813
AcuI CTGAAG 2 cut(s) 132, 1827
AcyI GRCGYC 1 cut(s) 1694
AfaI GTAC 2 cut(s) 183, 433
AfiI CCNNNNNNNGG 3 cut(s) 853, 870, 1790
AflII CTTAAG 2 cut(s) 410, 1139
AflIII ACRYGT 1 cut(s) 468
AjiI CACGTC 1 cut(s) 469
AluBI AGCT 8 cut(s) 52, 65, 73, 211, 1458, 1479, 1728, 1825
AluI AGCT 8 cut(s) 52, 65, 73, 211, 1458, 1479, 1728, 1825
Alw21I GWGCWC 2 cut(s) 213, 1578
Alw26I GTCTC 2 cut(s) 584, 1806
Alw44I GTGCAC 1 cut(s) 1574
AlwI GGATC 2 cut(s) 419, 1056
AlwNI CAGNNNCTG 1 cut(s) 870
AoxI GGCC 4 cut(s) 838, 927, 1468, 1486
ApaLI GTGCAC 1 cut(s) 1574
ApeKI GCWGC 3 cut(s) 479, 1208, 1211
ApoI RAATTY 3 cut(s) 218, 1626, 1813
AseI ATTAAT 1 cut(s) 822
AspS9I GGNCC 5 cut(s) 636, 751, 839, 1280, 1486
AsuHPI GGTGA 2 cut(s) 1027, 1689
AsuII TTCGAA 1 cut(s) 1181
AvaII GGWCC 3 cut(s) 636, 751, 1280
BaeGI GKGCMC 2 cut(s) 1444, 1578
BalI TGGCCA 1 cut(s) 929
BanI GGYRCC 2 cut(s) 542, 860
BanII GRGCYC 1 cut(s) 213
BbsI GAAGAC 3 cut(s) 36, 345, 1437
Bbv12I GWGCWC 2 cut(s) 213, 1578
BbvI GCAGC 3 cut(s) 466, 1195, 1198
BccI CCATC 6 cut(s) 272, 533, 679, 1292, 1292, 1792
BceAI ACGGC 2 cut(s) 646, 1002
BciVI GTATCC 2 cut(s) 607, 1060
BcoDI GTCTC 2 cut(s) 584, 1806
BfaI CTAG 4 cut(s) 323, 708, 990, 1455
BfmI CTRYAG 4 cut(s) 26, 312, 1155, 1459
BfrI CTTAAG 2 cut(s) 410, 1139
BfuI GTATCC 2 cut(s) 607, 1060
BglI GCCNNNNNGGC 1 cut(s) 1508
BglII AGATCT 1 cut(s) 397
BisI GCNGC 3 cut(s) 480, 1209, 1212
BlsI GCNGC 3 cut(s) 481, 1210, 1213
Bme18I GGWCC 3 cut(s) 636, 751, 1280
BmgBI CACGTC 1 cut(s) 469
BmgT120I GGNCC 5 cut(s) 636, 751, 839, 1280, 1486
BmiI GGNNCC 5 cut(s) 544, 752, 862, 1282, 1487
BmrI ACTGGG 2 cut(s) 185, 462
BmsI GCATC 9 cut(s) 153, 262, 298, 589, 876, 951, 1007, 1159, 1601
BmuI ACTGGG 2 cut(s) 185, 462
BpiI GAAGAC 3 cut(s) 36, 345, 1437
Bpu14I TTCGAA 1 cut(s) 1181
BpuEI CTTGAG 4 cut(s) 608, 1129, 1456, 1493
BsaBI GATNNNNATC 2 cut(s) 965, 1752
BsaHI GRCGYC 1 cut(s) 1694
BsaJI CCNNGG 1 cut(s) 327
Bsc4I CCNNNNNNNGG 3 cut(s) 853, 870, 1790
Bse1I ACTGG 3 cut(s) 180, 457, 546
Bse8I GATNNNNATC 2 cut(s) 965, 1752
BseDI CCNNGG 1 cut(s) 327
BseGI GGATG 2 cut(s) 1174, 1303
BseJI GATNNNNATC 2 cut(s) 965, 1752
BseLI CCNNNNNNNGG 3 cut(s) 853, 870, 1790
BseNI ACTGG 3 cut(s) 180, 457, 546
BseSI GKGCMC 2 cut(s) 1444, 1578
BseXI GCAGC 3 cut(s) 466, 1195, 1198
BsgI GTGCAG 1 cut(s) 570
BshFI GGCC 4 cut(s) 840, 929, 1470, 1488
BshNI GGYRCC 2 cut(s) 542, 860
BsiHKAI GWGCWC 2 cut(s) 213, 1578
BsiSI CCGG 1 cut(s) 1503
BslFI GGGAC 1 cut(s) 764
BslI CCNNNNNNNGG 3 cut(s) 853, 870, 1790
BsmAI GTCTC 2 cut(s) 584, 1806
BsmBI CGTCTC 1 cut(s) 1806
BsmFI GGGAC 1 cut(s) 764
BsnI GGCC 4 cut(s) 840, 929, 1470, 1488
Bsp119I TTCGAA 1 cut(s) 1181
Bsp1286I GDGCHC 3 cut(s) 213, 1444, 1578
Bsp1407I TGTACA 1 cut(s) 181
Bsp143I GATC 3 cut(s) 397, 424, 1048
Bsp19I CCATGG 1 cut(s) 327
BspACI CCGC 2 cut(s) 482, 1331
BspANI GGCC 4 cut(s) 840, 929, 1470, 1488
BspLI GGNNCC 5 cut(s) 544, 752, 862, 1282, 1487
BspPI GGATC 2 cut(s) 419, 1056
BspQI GCTCTTC 3 cut(s) 510, 1179, 1815
BspT104I TTCGAA 1 cut(s) 1181
BspT107I GGYRCC 2 cut(s) 542, 860
BspTI CTTAAG 2 cut(s) 410, 1139
BsrGI TGTACA 1 cut(s) 181
BsrI ACTGG 3 cut(s) 180, 457, 546
BssECI CCNNGG 1 cut(s) 327
BssMI GATC 3 cut(s) 397, 424, 1048
BssNAI GTATAC 1 cut(s) 666
BssNI GRCGYC 1 cut(s) 1694
BssT1I CCWWGG 1 cut(s) 327
Bst1107I GTATAC 1 cut(s) 666
Bst4CI ACNGT 7 cut(s) 30, 128, 316, 1012, 1072, 1427, 1652
Bst6I CTCTTC 3 cut(s) 510, 1179, 1815
BstACI GRCGYC 1 cut(s) 1694
BstAFI CTTAAG 2 cut(s) 410, 1139
BstAUI TGTACA 1 cut(s) 181
BstBI TTCGAA 1 cut(s) 1181
BstC8I GCNNGC 2 cut(s) 553, 1353
BstDEI CTNAG 2 cut(s) 1361, 1724
BstDSI CCRYGG 1 cut(s) 327
BstEII GGTNACC 1 cut(s) 415
BstENI CCTNNNNNAGG 1 cut(s) 851
BstF5I GGATG 2 cut(s) 1174, 1303
BstKTI GATC 3 cut(s) 400, 427, 1051
BstMAI GTCTC 2 cut(s) 584, 1806
BstMBI GATC 3 cut(s) 397, 424, 1048
BstMWI GCNNNNNNNGC 6 cut(s) 308, 317, 995, 1476, 1485, 1508
BstNSI RCATGY 1 cut(s) 1355
BstPI GGTNACC 1 cut(s) 415
BstSFI CTRYAG 4 cut(s) 26, 312, 1155, 1459
BstSLI GKGCMC 2 cut(s) 1444, 1578
BstV1I GCAGC 3 cut(s) 466, 1195, 1198
BstV2I GAAGAC 3 cut(s) 36, 345, 1437
BstX2I RGATCY 3 cut(s) 397, 424, 1048
BstYI RGATCY 3 cut(s) 397, 424, 1048
BstZ17I GTATAC 1 cut(s) 666
BsuI GTATCC 2 cut(s) 607, 1060
BsuRI GGCC 4 cut(s) 840, 929, 1470, 1488
BtgI CCRYGG 1 cut(s) 327
BtrI CACGTC 1 cut(s) 469
BtsCI GGATG 2 cut(s) 1174, 1303
BtsIMutI CAGTG 2 cut(s) 450, 553
Cac8I GCNNGC 2 cut(s) 553, 1353
CaiI CAGNNNCTG 1 cut(s) 870
Cfr13I GGNCC 5 cut(s) 636, 751, 839, 1280, 1486
CseI GACGC 2 cut(s) 1683, 1788
Csp6I GTAC 2 cut(s) 182, 432
CviAII CATG 8 cut(s) 328, 723, 747, 1234, 1352, 1599, 1618, 1679
CviQI GTAC 2 cut(s) 182, 432
DdeI CTNAG 2 cut(s) 1361, 1724
DpnI GATC 3 cut(s) 399, 426, 1050
DpnII GATC 3 cut(s) 397, 424, 1048
DraI TTTAAA 3 cut(s) 132, 1150, 1291
EaeI YGGCCR 1 cut(s) 927
Eam1104I CTCTTC 3 cut(s) 510, 1179, 1815
EarI CTCTTC 3 cut(s) 510, 1179, 1815
Ecl136II GAGCTC 1 cut(s) 211
Eco130I CCWWGG 1 cut(s) 327
Eco24I GRGCYC 1 cut(s) 213
Eco32I GATATC 1 cut(s) 448
Eco47I GGWCC 3 cut(s) 636, 751, 1280
Eco53kI GAGCTC 1 cut(s) 211
Eco57I CTGAAG 2 cut(s) 132, 1827
Eco91I GGTNACC 1 cut(s) 415
EcoICRI GAGCTC 1 cut(s) 211
EcoNI CCTNNNNNAGG 1 cut(s) 851
EcoO109I RGGNCCY 3 cut(s) 636, 751, 1486
EcoO65I GGTNACC 1 cut(s) 415
EcoRI GAATTC 1 cut(s) 218
EcoRV GATATC 1 cut(s) 448
EcoT14I CCWWGG 1 cut(s) 327
EcoT22I ATGCAT 1 cut(s) 724
EcoT38I GRGCYC 1 cut(s) 213
ErhI CCWWGG 1 cut(s) 327
Esp3I CGTCTC 1 cut(s) 1806
FaeI CATG 8 cut(s) 331, 726, 750, 1237, 1355, 1602, 1621, 1682
FalI AAGNNNNNCTT 2 cut(s) 570, 602
FaqI GGGAC 1 cut(s) 764
FatI CATG 8 cut(s) 327, 722, 746, 1233, 1351, 1598, 1617, 1678
FauI CCCGC 1 cut(s) 1338
FauNDI CATATG 1 cut(s) 499
FblI GTMKAC 2 cut(s) 665, 702
Fnu4HI GCNGC 3 cut(s) 480, 1209, 1212
FokI GGATG 2 cut(s) 1181, 1310
FriOI GRGCYC 1 cut(s) 213
Fsp4HI GCNGC 3 cut(s) 480, 1209, 1212
FspBI CTAG 4 cut(s) 323, 708, 990, 1455
GluI GCNGC 3 cut(s) 480, 1209, 1212
HaeIII GGCC 4 cut(s) 840, 929, 1470, 1488
HapII CCGG 1 cut(s) 1503
HgaI GACGC 2 cut(s) 1683, 1788
Hin1I GRCGYC 1 cut(s) 1694
Hin1II CATG 8 cut(s) 331, 726, 750, 1237, 1355, 1602, 1621, 1682
HinfI GANTC 9 cut(s) 256, 520, 671, 933, 1130, 1583, 1609, 1682, 1753
HpaII CCGG 1 cut(s) 1503
HphI GGTGA 2 cut(s) 1027, 1689
Hpy166II GTNNAC 9 cut(s) 173, 182, 649, 666, 703, 1099, 1576, 1673, 1721
Hpy188I TCNGA 2 cut(s) 626, 1076
Hpy8I GTNNAC 9 cut(s) 173, 182, 649, 666, 703, 1099, 1576, 1673, 1721
Hpy99I CGWCG 2 cut(s) 470, 1076
HpyAV CCTTC 5 cut(s) 83, 394, 1231, 1367, 1599
HpyCH4III ACNGT 7 cut(s) 30, 128, 316, 1012, 1072, 1427, 1652
HpyCH4IV ACGT 4 cut(s) 192, 342, 468, 1095
HpyF10VI GCNNNNNNNGC 6 cut(s) 308, 317, 995, 1476, 1485, 1508
HpyF3I CTNAG 2 cut(s) 1361, 1724
HpySE526I ACGT 4 cut(s) 192, 342, 468, 1095
Hsp92I GRCGYC 1 cut(s) 1694
Hsp92II CATG 8 cut(s) 331, 726, 750, 1237, 1355, 1602, 1621, 1682
Kzo9I GATC 3 cut(s) 397, 424, 1048
LguI GCTCTTC 3 cut(s) 510, 1179, 1815
LmnI GCTCC 2 cut(s) 1265, 1331
Lsp1109I GCAGC 3 cut(s) 466, 1195, 1198
LweI GCATC 9 cut(s) 153, 262, 298, 589, 876, 951, 1007, 1159, 1601
MaeI CTAG 4 cut(s) 323, 708, 990, 1455
MaeII ACGT 4 cut(s) 192, 342, 468, 1095
MaeIII GTNAC 8 cut(s) 415, 492, 920, 980, 1033, 1366, 1421, 1695
MalI GATC 3 cut(s) 399, 426, 1050
MboI GATC 3 cut(s) 397, 424, 1048
MboII GAAGA 9 cut(s) 36, 138, 350, 497, 1166, 1172, 1393, 1442, 1832
MfeI CAATTG 1 cut(s) 1215
MflI RGATCY 3 cut(s) 397, 424, 1048
MhlI GDGCHC 3 cut(s) 213, 1444, 1578
MlsI TGGCCA 1 cut(s) 929
MluCI AATT 8 cut(s) 218, 242, 488, 819, 1215, 1518, 1626, 1813
MluNI TGGCCA 1 cut(s) 929
MmeI TCCRAC 1 cut(s) 1054
MnlI CCTC 5 cut(s) 17, 897, 980, 1505, 1655
Mox20I TGGCCA 1 cut(s) 929
Mph1103I ATGCAT 1 cut(s) 724
MscI TGGCCA 1 cut(s) 929
MslI CAYNNNNRTG 2 cut(s) 1571, 1597
Msp20I TGGCCA 1 cut(s) 929
MspCI CTTAAG 2 cut(s) 410, 1139
MspI CCGG 1 cut(s) 1503
MunI CAATTG 1 cut(s) 1215
MwoI GCNNNNNNNGC 6 cut(s) 308, 317, 995, 1476, 1485, 1508
NcoI CCATGG 1 cut(s) 327
NdeI CATATG 1 cut(s) 499
NdeII GATC 3 cut(s) 397, 424, 1048
NlaIII CATG 8 cut(s) 331, 726, 750, 1237, 1355, 1602, 1621, 1682
NlaIV GGNNCC 5 cut(s) 544, 752, 862, 1282, 1487
NmuCI GTSAC 3 cut(s) 1033, 1366, 1695
NsiI ATGCAT 1 cut(s) 724
NspI RCATGY 1 cut(s) 1355
NspV TTCGAA 1 cut(s) 1181
PaeI GCATGC 1 cut(s) 1355
PciSI GCTCTTC 3 cut(s) 510, 1179, 1815
PcsI WCGNNNNNNNCGW 2 cut(s) 1068, 1796
PfeI GAWTC 9 cut(s) 256, 520, 671, 933, 1130, 1583, 1609, 1682, 1753
PflMI CCANNNNNTGG 1 cut(s) 870
PkrI GCNGC 3 cut(s) 481, 1210, 1213
PpuMI RGGWCCY 2 cut(s) 636, 751
PshBI ATTAAT 1 cut(s) 822
Psp124BI GAGCTC 1 cut(s) 213
Psp5II RGGWCCY 2 cut(s) 636, 751
PspEI GGTNACC 1 cut(s) 415
PspN4I GGNNCC 5 cut(s) 544, 752, 862, 1282, 1487
PspPI GGNCC 5 cut(s) 636, 751, 839, 1280, 1486
PspPPI RGGWCCY 2 cut(s) 636, 751
PstNI CAGNNNCTG 1 cut(s) 870
PsuI RGATCY 3 cut(s) 397, 424, 1048
RsaI GTAC 2 cut(s) 183, 433
RsaNI GTAC 2 cut(s) 182, 432
RseI CAYNNNNRTG 2 cut(s) 1571, 1597
SacI GAGCTC 1 cut(s) 213
SapI GCTCTTC 3 cut(s) 510, 1179, 1815
SatI GCNGC 3 cut(s) 480, 1209, 1212
Sau3AI GATC 3 cut(s) 397, 424, 1048
Sau96I GGNCC 5 cut(s) 636, 751, 839, 1280, 1486
SduI GDGCHC 3 cut(s) 213, 1444, 1578
SfaNI GCATC 9 cut(s) 153, 262, 298, 589, 876, 951, 1007, 1159, 1601
SfcI CTRYAG 4 cut(s) 26, 312, 1155, 1459
SfuI TTCGAA 1 cut(s) 1181
SinI GGWCC 3 cut(s) 636, 751, 1280
SmiMI CAYNNNNRTG 2 cut(s) 1571, 1597
SmlI CTYRAG 6 cut(s) 410, 587, 1108, 1139, 1435, 1472
SmoI CTYRAG 6 cut(s) 410, 587, 1108, 1139, 1435, 1472
SphI GCATGC 1 cut(s) 1355
Sse9I AATT 8 cut(s) 218, 242, 488, 819, 1215, 1518, 1626, 1813
SsiI CCGC 2 cut(s) 482, 1331
SspI AATATT 1 cut(s) 1256
SspMI CTAG 4 cut(s) 323, 708, 990, 1455
SstI GAGCTC 1 cut(s) 213
StyI CCWWGG 1 cut(s) 327
TaaI ACNGT 7 cut(s) 30, 128, 316, 1012, 1072, 1427, 1652
TaiI ACGT 4 cut(s) 195, 345, 471, 1098
TaqI TCGA 8 cut(s) 137, 161, 213, 465, 817, 1181, 1595, 1647
TaqII GACCGA 1 cut(s) 1385
TasI AATT 8 cut(s) 218, 242, 488, 819, 1215, 1518, 1626, 1813
TatI WGTACW 1 cut(s) 181
TfiI GAWTC 9 cut(s) 256, 520, 671, 933, 1130, 1583, 1609, 1682, 1753
TscAI CASTG 2 cut(s) 457, 553
TseFI GTSAC 3 cut(s) 1033, 1366, 1695
TseI GCWGC 3 cut(s) 479, 1208, 1211
Tsp45I GTSAC 3 cut(s) 1033, 1366, 1695
TspDTI ATGAA 7 cut(s) 155, 231, 297, 1236, 1250, 1533, 1650
TspGWI ACGGA 2 cut(s) 683, 1310
TspRI CASTG 2 cut(s) 457, 553
Van91I CCANNNNNTGG 1 cut(s) 870
Vha464I CTTAAG 2 cut(s) 410, 1139
VneI GTGCAC 1 cut(s) 1574
VpaK11BI GGWCC 3 cut(s) 636, 751, 1280
VspI ATTAAT 1 cut(s) 822
XagI CCTNNNNNAGG 1 cut(s) 851
XapI RAATTY 3 cut(s) 218, 1626, 1813
XceI RCATGY 1 cut(s) 1355
XcmI CCANNNNNNNNNTGG 1 cut(s) 164
XmiI GTMKAC 2 cut(s) 665, 702
XspI CTAG 4 cut(s) 323, 708, 990, 1455
Zsp2I ATGCAT 1 cut(s) 724
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.