RchiOBHm_Chr6g0269781

Glutamate receptor

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Forward (+)
27240371 .. 27245958
5588 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ24200

Sequence Viewer

Length: 2751 bp
ATGAAGAACCATACAAATATCAATACCATCCTTGTTCCTTTTATGTTTTTCTTCGTTCTGTTTTCATGGATTTTCATGGCCTTGAGTGCACAGAACACAACTATTCGAGTGAATGTGGGTGTAATTCTTGACTTTGATTCAGGGAGTGGAAAAAGTGGGAACGTTTATTGGAGTTGTATGAAGCTGGCCCTCTCAGACTTCTATGCATCCAATCCTCACTACAGGACTAGGTTGGTTTTGCTCCCAAGAAACTCCAAAGGAACTGTTGTTGGTGCAGCCGCAGCAGCTGTAGATCTGATAAACAATAAAGATGTCCAAGCAATCATAGGGCCCGGAACATCAATGGAGGCAGACTTTGTTATAAATGTGGGAACCGAAGCTAAAGTGCCCATTTTAACCTTTTCTGCATCAAGTCCTTGTCTTACTTCACTAGGGAGCTCCTTCTTTTTCCGACTTACACAAAATGACTTGATCCAAGTGAAAGCCATAAGTGGTATCGTTCAGAACTTTGGATGGAGACAAGTTGTTCCCATCTACGAAGACAATTCTTACGGAGAGGGAATCATACCTTTTCTAATTGATGCCTTGCAAGAATGTGATGCTCATGTTCCCTACAGAAGTGTAGTTTCTGAATCAGCCACTGATGATCAAATTGAAAAAGAGCTTTACAAGTTAATGACGATGCAAACTAGAGTCTTCGTTGTTCATATGATGAATCTTGATCTGTGCTCTAAGTTATTTTCCAAGGCAAAAAGTATTGGAATGATGAGTACAGATTATGTTTGGATCATGACTGGTGGGATATCTAATCGTATAAACTCGATGAGTTATTCAGACCGAAATTCCATGGAAGGTGTATTAGGCATACAAACAGACATTCGAAGAACACCAAAGCTTAAGGAATTTGAAAGGCGGTGGAAAATGAAATTCCAACAAGACAATCCAAACATAACTTTGGATGTTTATGGATTTCAAGCTCATGATGCTATCTTTGCACTAGCTATGGCAGTCGAACAATTTGGAAATACAAGCATCGAATATCAAAATGCGAGCGATTCCTTAAAGGCAACAGATCTTGATGCTCTTAAGGTATCTCAGTATGGTCCAGAACTTGCTAAAGCCCTATCTCGTACTAGATTTGAAGGCATTGCTGGAGAGTTCAATGTCGTAGAAGGGGAGCTTCAGTCGACAACTTATAAGATAATTAATATAATTGGTGGTAATGTAAAGAGAATTGCATTGTGTACTCCACAGAAAGGAATGGTTTCAGCAAACACAAGCAAAGTCTTTACTAATTCCAAGTGCATTTTTGAACCCATTAAATGGCCAGGTGATTCTTTCTCTGTTCCTAAAGGATGGGAGATCCCAACTAACAGAAAGAAGTTGAGAGTAGGAGTTCCAGTCAAGGATAGTTTGACTGAGTTTGTTAAGATCACGAAAGATCCTAACACTAAAACAACGGCTGTCACAGGGTTCTGTATCGATGTCTTCAATGCTGCATTGGAATTATTACCGTATGCTCTTCCTTATGAGTTCATTCCTTATGAAAATTCTAATGGCTCGATGGCTGGGACTTACGATGATTTGGTCTATCAAGTATTTCTTGATAAATTTGATGCTGTTGTTGGAGATACAACAATTAGAGCGAACAGATCCTTGTATGTTGACTTTACAATGCCATACAGTGAATCTGATGTAGGAATGGTTGTGCCAATCAGCGACAGCAAAAGCAAAAATGCATGGATTTTCATGCAGCCTTTGACATGGGGCCTTTGGTTGACAACTTTGTGTTTCTTCATCTTTATTGCTTTTGTTGTCTGGGTGTTGGAACATCGAATTAACAAAGATTTTCGGGGTCCTCCTTCACATCAAGTTGGAACAAGCTTCTGGTTTTCTTTTTCAACCATGGTTTTTTCACATAGGGAGAAAGTGGTTAGCAACTCAGCTAGATTTGTGATTACTGTATGGGTATTTGTTATGCTCATAGTGACACAAAGCTACACAGCTAATTTATCATCACTATTAACAGTCCAACAACCCCAGCCCACTGTTACCGAGTTAAATGATCTTTTAAGGAATGGCGATAATGTCGGCTACAGCAAGAATTCTTTTGTTCGTGAGGTCTTGATTGAAAAGGGTTTTAAAAACAGGGTCAAAGAAATTAAATTGATGGAAGATGGTGACAAAGAACTCACAAAAGGTACTGCAAAGGGTGGTATTGCTGCTTTTGTTGGTGATACCCCAGCCTTGGAGTTTTTTCTTGCAAAGTACTGCTCCAAATACATCATGGTTGGACCTATCTCCAAAACTAATGGGTTTGCCTTCGTGTTCCCTAAAGGTTCACCTCTTGTAGCTGATATGTCAAGCGCAATCCTAAATGTGACCGAAGGGAAGAAGATTATGAAGATTGAAGCCAATTGGATTAAGAAAGAAAGCAATTGTCAAGGCTCAAGTTCCAGCAATATCTCTGGCCCCAACAGTCTTGGCCTTAATAGCTTCTGGGGACTATTCCTCGTTGCTGGGATCGTTTCTGTATTCTCTCTTATCATTTTTTTCACTTCCTTCATTTACAAGCACAAGCATGTCTTGATGTCCCCTGATTCAACAGCTTCTACATGGAGAAGGATTCGTGCCATATTTGAAACTTTTGATGACAGAGATGCCAGCTATTATAGTTCTACAAGTAGTCAACATTTGAAAAAGTTCAGTGGGGTTGGCGATCATGGACCAAATGCATCGATCACTGGCTAG

Protein Analysis

916

Amino Acids

102.02

Weight (kDa)

8.51

Isoelectric Point (pI)

30.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peripla_BP_6 PF13458 37 - 360 1.3e-19 Periplasmic binding protein
ANF_receptor PF01094 59 - 406 3.7e-74 Receptor family ligand binding region
Lig_chan-Glu_bd PF10613 481 - 570 5.3e-08 Ligated ion channel L-glutamate- and glycine-binding site
SBP_bac_3 PF00497 488 - 809 1.5e-06 Bacterial extracellular solute-binding proteins, family 3
Lig_chan PF00060 589 - 842 7.1e-40 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 362, 1197
AccB7I CCANNNNNTGG 1 cut(s) 1323
AccI GTMKAC 1 cut(s) 1187
AciI CCGC 2 cut(s) 279, 913
AclI AACGTT 1 cut(s) 162
AclWI GGATC 6 cut(s) 466, 794, 1357, 1436, 1647, 2531
AcoI YGGCCR 1 cut(s) 1325
AcsI RAATTY 6 cut(s) 841, 902, 926, 1549, 1610, 2104
AcuI CTGAAG 1 cut(s) 1166
AfaI GTAC 5 cut(s) 772, 1132, 1246, 2203, 2270
AfiI CCNNNNNNNGG 3 cut(s) 1256, 1323, 2248
AflII CTTAAG 2 cut(s) 896, 1085
AjnI CCWGG 1 cut(s) 1327
Alw21I GWGCWC 3 cut(s) 91, 440, 731
Alw26I GTCTC 1 cut(s) 511
Alw44I GTGCAC 1 cut(s) 87
AlwI GGATC 6 cut(s) 466, 794, 1357, 1436, 1647, 2531
AlwNI CAGNNNCTG 2 cut(s) 287, 641
AoxI GGCC 7 cut(s) 78, 186, 329, 1325, 1768, 2470, 2485
ApaI GGGCCC 1 cut(s) 333
ApaLI GTGCAC 1 cut(s) 87
ApeKI GCWGC 6 cut(s) 275, 281, 284, 1496, 1753, 2222
ApoI RAATTY 6 cut(s) 841, 902, 926, 1549, 1610, 2104
AseI ATTAAT 1 cut(s) 1206
Asp700I GAANNNNTTC 2 cut(s) 1264, 2702
AspLEI GCGC 1 cut(s) 2369
AspS9I GGNCC 9 cut(s) 187, 329, 330, 1103, 1768, 1856, 2294, 2471, 2726
AsuC2I CCSGG 1 cut(s) 333
AsuHPI GGTGA 4 cut(s) 1343, 2192, 2246, 2334
AsuII TTCGAA 1 cut(s) 880
AvaII GGWCC 4 cut(s) 1103, 1856, 2294, 2726
BaeGI GKGCMC 3 cut(s) 91, 333, 390
BalI TGGCCA 1 cut(s) 1327
BanII GRGCYC 2 cut(s) 333, 440
BbsI GAAGAC 3 cut(s) 546, 688, 1480
Bbv12I GWGCWC 3 cut(s) 91, 440, 731
BbvI GCAGC 6 cut(s) 287, 293, 296, 1483, 1765, 2209
BccI CCATC 7 cut(s) 35, 507, 539, 1350, 1558, 2164, 2171
BceAI ACGGC 1 cut(s) 1476
BciT130I CCWGG 1 cut(s) 1329
BclI TGATCA 1 cut(s) 646
BcnI CCSGG 1 cut(s) 333
BcoDI GTCTC 1 cut(s) 511
BfaI CTAG 7 cut(s) 228, 431, 690, 998, 1134, 1947, 2749
BfmI CTRYAG 4 cut(s) 220, 288, 613, 2095
BfrI CTTAAG 2 cut(s) 896, 1085
BglII AGATCT 2 cut(s) 292, 1072
BisI GCNGC 7 cut(s) 276, 279, 282, 285, 1497, 1754, 2223
BlsI GCNGC 7 cut(s) 277, 280, 283, 286, 1498, 1755, 2224
BmcAI AGTACT 1 cut(s) 2270
Bme1390I CCNGG 2 cut(s) 333, 1329
Bme18I GGWCC 4 cut(s) 1103, 1856, 2294, 2726
BmgT120I GGNCC 9 cut(s) 187, 329, 330, 1103, 1768, 1856, 2294, 2471, 2726
BmiI GGNNCC 5 cut(s) 331, 373, 1769, 1857, 2473
BmrFI CCNGG 2 cut(s) 333, 1329
BpiI GAAGAC 3 cut(s) 546, 688, 1480
BpmI CTGGAG 1 cut(s) 1173
Bpu14I TTCGAA 1 cut(s) 880
BpuEI CTTGAG 2 cut(s) 103, 2434
BpuMI CCSGG 1 cut(s) 333
Bsa29I ATCGAT 2 cut(s) 1482, 2738
BsaJI CCNNGG 4 cut(s) 744, 846, 1905, 2247
BsaXI ACNNNNNCTCC 4 cut(s) 1169, 1199, 1386, 1416
Bsc4I CCNNNNNNNGG 3 cut(s) 1256, 1323, 2248
Bse1I ACTGG 3 cut(s) 799, 1400, 2749
Bse3DI GCAATG 1 cut(s) 1146
BseBI CCWGG 1 cut(s) 1329
BseCI ATCGAT 2 cut(s) 1482, 2738
BseDI CCNNGG 4 cut(s) 744, 846, 1905, 2247
BseGI GGATG 5 cut(s) 27, 206, 518, 964, 1361
BseLI CCNNNNNNNGG 3 cut(s) 1256, 1323, 2248
BseMI GCAATG 1 cut(s) 1146
BseMII CTCAG 4 cut(s) 207, 1109, 1410, 1956
BseNI ACTGG 3 cut(s) 799, 1400, 2749
BseSI GKGCMC 3 cut(s) 91, 333, 390
BseXI GCAGC 6 cut(s) 287, 293, 296, 1483, 1765, 2209
BseYI CCCAGC 4 cut(s) 1568, 2040, 2242, 2519
BsgI GTGCAG 1 cut(s) 294
BshFI GGCC 7 cut(s) 80, 188, 331, 1327, 1770, 2472, 2487
BshVI ATCGAT 2 cut(s) 1482, 2738
BsiHKAI GWGCWC 3 cut(s) 91, 440, 731
BsiSI CCGG 1 cut(s) 333
BslFI GGGAC 3 cut(s) 1585, 2517, 2578
BslI CCNNNNNNNGG 3 cut(s) 1256, 1323, 2248
BsmAI GTCTC 1 cut(s) 511
BsmFI GGGAC 3 cut(s) 1585, 2517, 2578
BsnI GGCC 7 cut(s) 80, 188, 331, 1327, 1770, 2472, 2487
Bsp119I TTCGAA 1 cut(s) 880
Bsp120I GGGCCC 1 cut(s) 329
Bsp1286I GDGCHC 5 cut(s) 91, 333, 390, 440, 731
Bsp19I CCATGG 2 cut(s) 846, 1905
BspACI CCGC 2 cut(s) 279, 913
BspANI GGCC 7 cut(s) 80, 188, 331, 1327, 1770, 2472, 2487
BspCNI CTCAG 4 cut(s) 206, 1108, 1411, 1955
BspDI ATCGAT 2 cut(s) 1482, 2738
BspHI TCATGA 2 cut(s) 789, 979
BspLI GGNNCC 5 cut(s) 331, 373, 1769, 1857, 2473
BspPI GGATC 6 cut(s) 466, 794, 1357, 1436, 1647, 2531
BspQI GCTCTTC 1 cut(s) 1527
BspT104I TTCGAA 1 cut(s) 880
BspTI CTTAAG 2 cut(s) 896, 1085
BsrDI GCAATG 1 cut(s) 1146
BsrI ACTGG 3 cut(s) 799, 1400, 2749
BssECI CCNNGG 4 cut(s) 744, 846, 1905, 2247
BssT1I CCWWGG 4 cut(s) 744, 846, 1905, 2247
Bst2UI CCWGG 1 cut(s) 1329
Bst4CI ACNGT 7 cut(s) 265, 1515, 1685, 1963, 2029, 2050, 2480
Bst6I CTCTTC 1 cut(s) 1527
BstAFI CTTAAG 2 cut(s) 896, 1085
BstBI TTCGAA 1 cut(s) 880
BstC8I GCNNGC 3 cut(s) 186, 1051, 2665
BstDEI CTNAG 5 cut(s) 193, 732, 1095, 1419, 1942
BstDSI CCRYGG 2 cut(s) 846, 1905
BstF5I GGATG 5 cut(s) 27, 206, 518, 964, 1361
BstHHI GCGC 1 cut(s) 2369
BstMAI GTCTC 1 cut(s) 511
BstMWI GCNNNNNNNGC 6 cut(s) 86, 281, 284, 983, 992, 2493
BstNI CCWGG 1 cut(s) 1329
BstNSI RCATGY 1 cut(s) 2585
BstSCI CCNGG 2 cut(s) 331, 1327
BstSFI CTRYAG 4 cut(s) 220, 288, 613, 2095
BstSLI GKGCMC 3 cut(s) 91, 333, 390
BstV1I GCAGC 6 cut(s) 287, 293, 296, 1483, 1765, 2209
BstV2I GAAGAC 3 cut(s) 546, 688, 1480
BstX2I RGATCY 5 cut(s) 292, 1072, 1362, 1441, 1652
BstYI RGATCY 5 cut(s) 292, 1072, 1362, 1441, 1652
Bsu15I ATCGAT 2 cut(s) 1482, 2738
BsuRI GGCC 7 cut(s) 80, 188, 331, 1327, 1770, 2472, 2487
BsuTUI ATCGAT 2 cut(s) 1482, 2738
BtgI CCRYGG 2 cut(s) 846, 1905
BtsCI GGATG 5 cut(s) 27, 206, 518, 964, 1361
BtsIMutI CAGTG 5 cut(s) 639, 1690, 2046, 2713, 2742
Cac8I GCNNGC 3 cut(s) 186, 1051, 2665
CaiI CAGNNNCTG 2 cut(s) 287, 641
CciI TCATGA 2 cut(s) 789, 979
CfoI GCGC 1 cut(s) 2369
Cfr13I GGNCC 9 cut(s) 187, 329, 330, 1103, 1768, 1856, 2294, 2471, 2726
ClaI ATCGAT 2 cut(s) 1482, 2738
Csp6I GTAC 5 cut(s) 771, 1131, 1245, 2202, 2269
CviQI GTAC 5 cut(s) 771, 1131, 1245, 2202, 2269
DdeI CTNAG 5 cut(s) 193, 732, 1095, 1419, 1942
DraI TTTAAA 1 cut(s) 2143
EaeI YGGCCR 1 cut(s) 1325
Eam1104I CTCTTC 1 cut(s) 1527
EarI CTCTTC 1 cut(s) 1527
Ecl136II GAGCTC 1 cut(s) 438
Eco130I CCWWGG 4 cut(s) 744, 846, 1905, 2247
Eco24I GRGCYC 2 cut(s) 333, 440
Eco32I GATATC 1 cut(s) 804
Eco47I GGWCC 4 cut(s) 1103, 1856, 2294, 2726
Eco53kI GAGCTC 1 cut(s) 438
Eco57I CTGAAG 1 cut(s) 1166
EcoICRI GAGCTC 1 cut(s) 438
EcoO109I RGGNCCY 3 cut(s) 329, 1768, 1856
EcoRI GAATTC 1 cut(s) 2104
EcoRII CCWGG 1 cut(s) 1327
EcoRV GATATC 1 cut(s) 804
EcoT14I CCWWGG 4 cut(s) 744, 846, 1905, 2247
EcoT22I ATGCAT 3 cut(s) 208, 1741, 2737
EcoT38I GRGCYC 2 cut(s) 333, 440
ErhI CCWWGG 4 cut(s) 744, 846, 1905, 2247
FalI AAGNNNNNCTT 6 cut(s) 1164, 1196, 1587, 1619, 2570, 2602
FaqI GGGAC 3 cut(s) 1585, 2517, 2578
FauNDI CATATG 1 cut(s) 708
FbaI TGATCA 1 cut(s) 646
FblI GTMKAC 1 cut(s) 1187
Fnu4HI GCNGC 7 cut(s) 276, 279, 282, 285, 1497, 1754, 2223
FokI GGATG 5 cut(s) 14, 193, 525, 971, 1368
FriOI GRGCYC 2 cut(s) 333, 440
Fsp4HI GCNGC 7 cut(s) 276, 279, 282, 285, 1497, 1754, 2223
FspBI CTAG 7 cut(s) 228, 431, 690, 998, 1134, 1947, 2749
GlaI GCGC 1 cut(s) 2368
GluI GCNGC 7 cut(s) 276, 279, 282, 285, 1497, 1754, 2223
GsaI CCCAGC 4 cut(s) 1572, 2044, 2246, 2523
GsuI CTGGAG 1 cut(s) 1173
HaeIII GGCC 7 cut(s) 80, 188, 331, 1327, 1770, 2472, 2487
HapII CCGG 1 cut(s) 333
HhaI GCGC 1 cut(s) 2369
Hin6I GCGC 1 cut(s) 2367
HinP1I GCGC 1 cut(s) 2367
HincII GTYRAC 4 cut(s) 1188, 1666, 1779, 2690
HindII GTYRAC 4 cut(s) 1188, 1666, 1779, 2690
HindIII AAGCTT 2 cut(s) 893, 1882
HpaII CCGG 1 cut(s) 333
HphI GGTGA 4 cut(s) 1343, 2192, 2246, 2334
Hpy166II GTNNAC 7 cut(s) 89, 1188, 1245, 1666, 1779, 2342, 2690
Hpy188I TCNGA 7 cut(s) 196, 297, 452, 504, 631, 835, 1693
Hpy8I GTNNAC 7 cut(s) 89, 1188, 1245, 1666, 1779, 2342, 2690
HpyAV CCTTC 9 cut(s) 451, 845, 1136, 1166, 1872, 2332, 2381, 2572, 2616
HpyCH4III ACNGT 7 cut(s) 265, 1515, 1685, 1963, 2029, 2050, 2480
HpyCH4IV ACGT 1 cut(s) 162
HpyF10VI GCNNNNNNNGC 6 cut(s) 86, 281, 284, 983, 992, 2493
HpyF3I CTNAG 5 cut(s) 193, 732, 1095, 1419, 1942
HpySE526I ACGT 1 cut(s) 162
HspAI GCGC 1 cut(s) 2367
Ksp22I TGATCA 1 cut(s) 646
LguI GCTCTTC 1 cut(s) 1527
LmnI GCTCC 5 cut(s) 246, 435, 443, 1177, 2279
Lsp1109I GCAGC 6 cut(s) 287, 293, 296, 1483, 1765, 2209
MaeI CTAG 7 cut(s) 228, 431, 690, 998, 1134, 1947, 2749
MaeII ACGT 1 cut(s) 162
MaeIII GTNAC 5 cut(s) 1465, 1987, 2050, 2180, 2380
MfeI CAATTG 2 cut(s) 2416, 2437
MflI RGATCY 5 cut(s) 292, 1072, 1362, 1441, 1652
MhlI GDGCHC 5 cut(s) 91, 333, 390, 440, 731
MlsI TGGCCA 1 cut(s) 1327
MluNI TGGCCA 1 cut(s) 1327
MlyI GAGTC 1 cut(s) 702
MmeI TCCRAC 7 cut(s) 475, 955, 1606, 1806, 1855, 2056, 2272
MnlI CCTC 8 cut(s) 200, 225, 340, 550, 1869, 2113, 2355, 2522
Mox20I TGGCCA 1 cut(s) 1327
Mph1103I ATGCAT 3 cut(s) 208, 1741, 2737
MroXI GAANNNNTTC 2 cut(s) 1264, 2702
MscI TGGCCA 1 cut(s) 1327
MslI CAYNNNNRTG 1 cut(s) 2580
Msp20I TGGCCA 1 cut(s) 1327
MspA1I CMGCKG 1 cut(s) 287
MspCI CTTAAG 2 cut(s) 896, 1085
MspI CCGG 1 cut(s) 333
MspR9I CCNGG 2 cut(s) 333, 1329
MunI CAATTG 2 cut(s) 2416, 2437
MvaI CCWGG 1 cut(s) 1329
MwoI GCNNNNNNNGC 6 cut(s) 86, 281, 284, 983, 992, 2493
NciI CCSGG 1 cut(s) 333
NcoI CCATGG 2 cut(s) 846, 1905
NdeI CATATG 1 cut(s) 708
NlaIV GGNNCC 5 cut(s) 331, 373, 1769, 1857, 2473
NmuCI GTSAC 4 cut(s) 1465, 1987, 2180, 2380
NsiI ATGCAT 3 cut(s) 208, 1741, 2737
NspI RCATGY 1 cut(s) 2585
NspV TTCGAA 1 cut(s) 880
PagI TCATGA 2 cut(s) 789, 979
PciSI GCTCTTC 1 cut(s) 1527
PdmI GAANNNNTTC 2 cut(s) 1264, 2702
PfeI GAWTC 9 cut(s) 137, 561, 632, 715, 1055, 1334, 1688, 2600, 2626
PflMI CCANNNNNTGG 1 cut(s) 1323
PkrI GCNGC 7 cut(s) 277, 280, 283, 286, 1498, 1755, 2224
PleI GAGTC 1 cut(s) 701
PpsI GAGTC 1 cut(s) 701
PpuMI RGGWCCY 1 cut(s) 1856
PshBI ATTAAT 1 cut(s) 1206
PsiI TTATAA 2 cut(s) 362, 1197
Psp124BI GAGCTC 1 cut(s) 440
Psp1406I AACGTT 1 cut(s) 162
Psp5II RGGWCCY 1 cut(s) 1856
Psp6I CCWGG 1 cut(s) 1327
PspFI CCCAGC 4 cut(s) 1568, 2040, 2242, 2519
PspGI CCWGG 1 cut(s) 1327
PspN4I GGNNCC 5 cut(s) 331, 373, 1769, 1857, 2473
PspOMI GGGCCC 1 cut(s) 329
PspPI GGNCC 9 cut(s) 187, 329, 330, 1103, 1768, 1856, 2294, 2471, 2726
PspPPI RGGWCCY 1 cut(s) 1856
PstNI CAGNNNCTG 2 cut(s) 287, 641
PsuI RGATCY 5 cut(s) 292, 1072, 1362, 1441, 1652
PvuII CAGCTG 1 cut(s) 287
RsaI GTAC 5 cut(s) 772, 1132, 1246, 2203, 2270
RsaNI GTAC 5 cut(s) 771, 1131, 1245, 2202, 2269
RseI CAYNNNNRTG 1 cut(s) 2580
SacI GAGCTC 1 cut(s) 440
SalI GTCGAC 1 cut(s) 1186
SapI GCTCTTC 1 cut(s) 1527
SatI GCNGC 7 cut(s) 276, 279, 282, 285, 1497, 1754, 2223
Sau96I GGNCC 9 cut(s) 187, 329, 330, 1103, 1768, 1856, 2294, 2471, 2726
ScaI AGTACT 1 cut(s) 2270
SchI GAGTC 1 cut(s) 702
ScrFI CCNGG 2 cut(s) 333, 1329
SduI GDGCHC 5 cut(s) 91, 333, 390, 440, 731
SfcI CTRYAG 4 cut(s) 220, 288, 613, 2095
SfuI TTCGAA 1 cut(s) 880
SinI GGWCC 4 cut(s) 1103, 1856, 2294, 2726
SmiMI CAYNNNNRTG 1 cut(s) 2580
SmlI CTYRAG 4 cut(s) 82, 896, 1085, 2449
SmoI CTYRAG 4 cut(s) 82, 896, 1085, 2449
SsiI CCGC 2 cut(s) 279, 913
SspMI CTAG 7 cut(s) 228, 431, 690, 998, 1134, 1947, 2749
SstI GAGCTC 1 cut(s) 440
StyD4I CCNGG 2 cut(s) 331, 1327
StyI CCWWGG 4 cut(s) 744, 846, 1905, 2247
TaaI ACNGT 7 cut(s) 265, 1515, 1685, 1963, 2029, 2050, 2480
TaiI ACGT 1 cut(s) 165
TaqII GACCGA 2 cut(s) 852, 2399
TatI WGTACW 3 cut(s) 770, 1244, 2268
TauI GCSGC 1 cut(s) 281
TfiI GAWTC 9 cut(s) 137, 561, 632, 715, 1055, 1334, 1688, 2600, 2626
TscAI CASTG 5 cut(s) 646, 1690, 2053, 2713, 2749
TseFI GTSAC 4 cut(s) 1465, 1987, 2180, 2380
TseI GCWGC 6 cut(s) 275, 281, 284, 1496, 1753, 2222
Tsp45I GTSAC 4 cut(s) 1465, 1987, 2180, 2380
TspGWI ACGGA 1 cut(s) 567
TspRI CASTG 5 cut(s) 646, 1690, 2053, 2713, 2749
Van91I CCANNNNNTGG 1 cut(s) 1323
Vha464I CTTAAG 2 cut(s) 896, 1085
VneI GTGCAC 1 cut(s) 87
VpaK11BI GGWCC 4 cut(s) 1103, 1856, 2294, 2726
VspI ATTAAT 1 cut(s) 1206
XapI RAATTY 6 cut(s) 841, 902, 926, 1549, 1610, 2104
XceI RCATGY 1 cut(s) 2585
XcmI CCANNNNNNNNNTGG 1 cut(s) 2284
XmiI GTMKAC 1 cut(s) 1187
XmnI GAANNNNTTC 2 cut(s) 1264, 2702
XspI CTAG 7 cut(s) 228, 431, 690, 998, 1134, 1947, 2749
ZrmI AGTACT 1 cut(s) 2270
Zsp2I ATGCAT 3 cut(s) 208, 1741, 2737
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.