RLG00000010962

Glutamate receptor

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Reverse (-)
5712888 .. 5716319
3432 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000010962

Sequence Viewer

Length: 2589 bp
ATGATAAACAAAATGTACTCTTCCAACCTTAATAAACTTGCTCTTACCTCTATCTTTGTCTTGTTTCTTTCTTCATGGATTTCCTTGGCCATTCCACAAAACGAAACAAGGATCCCAGTTGACATGGGGGTTGTTCTTGATGACCTTAATTCAGTGAGGGGCAAGATTTGGTTGAGCTGCATCAAAATGGCCCTGTCAGACTTCTATTTTTATCATCCTCACTACAAAACTAGGCTGGTCTTGAACACTAGGGACTCGAAGAAGAATGTTGTCGCTGCAGCTGTCTCAGCTCTAGATCTGATAAAGAATCATGACGTACCAGCCATCATCGGGCCAGTGACAGCGATGGAGACAAGCTTTGTCATTAATCTCGGAGACCAAACTCATGTGCCCATCATATCATTTTCTGCAACAAGTCCTTCTCTTACTTCGCTCCGGAGCTCCTACTTTTTCCAATTTGCACAGAATGACACATCTCAAGTGAAAGCTATAAGTGCAGTTATCCAAAACTTTGGGTGGAGACTAGTTGTGCTCATATACATAGACACTACGTATGGGGAGGCAATCATACCATTTTTAACCGATGCCTTACAAGAAGTGGGTATTGGTGTCTCCTACCGGAGTGTCATTTCCCCCTCTGCAGCCGATGATCAAATTGCAAACGAGCTTTACAAGTTGATGACCATGCAAACTAGAGTCTTCATTGTCCATATGACAACCAATCTATGCTCTAAGCTATTTGCCAAGGCAGAAGAGATTGGAATGATGGTTGAAGGCTATGTTTGGTTAACCACTAATGGGATTACTAATCGTTTAACTTCAATGAATTCTTCAGTCATCCATTCCATGAATGGAGTTATAGGTCTGCAAACTTATGTCCAGAAAACAAGAGAGCTGGAAGAATTCAAGCTCCGGTGGAAACGGCAGTTCCAAAAAGACTATCCACACATCATTGGTGCTGAATTGGATGTTTTCGGATTTTGGGCTTATGATGCTACTTTTGCCATAGCAATGGCAATTGAACAAGTGATTGGGACTACAAGTACTTTTGGTTTCCAAGAGCCAAATGCCTCCATCAAGTCCACAGATATTCTTGAAAGTTTTCCCATCTCTCCATATGGTCCAAAACTTTGCCAAGCCCTATCGACTACTAGATTCCCAGGCATTGCTGGGGATTTCATGCTCATTGATGGGCAACTTCAATCATCCAATTTTCGGATAATTAATGTCAACGGCCGTGGAGCGAGAACAATTGGATTTTGGACACCACTACATGGACTTGTAAGCAAAATGAGTTCCACAAATTCCACATGCCATCTTGGACCGGTTATATGGCCTGGAGAGTCTCTCTCTGTTCCCAAAGGGTGGGAGATCCCAACAAAGGGGAAGAAGTTGAGAATAGGAGTTCCTGTTAGGGATGGGTTTACTGAGCTTGTTAAGGTAACAATAGATCCAACCACCAACACAACGGATGTTACCGGATTCAGTATCGATGTCTTTAAGGCCGTAGTTGACATGTTACCATATGCTCTACCTTATGAGTTCATTCCCTTTGCAAAGCCTGATGGCACCAAAGCTGGCACTTACAATGACTTGTGCTATCAAGTATATCTTGGGAGAGTGGATACCAACTTGGCTAGATGTGTTATGATAATATGGGTATTTGTTGTGCTAGTACTGACAATTAATTACCAAGCAAGTCTAACCTCAATATATACGGTCGAAATACTCCAGCCAACTGTTACCAATATCAAGGATCTATTGAGGAAGGGGGAAAACATCGGCTACATACCAACTGCTTATACGTACGAGATGTTGAAGCAAGTAGGTTTTGAAGATTCCAAGCTTATGGCTTTGGGAACTATGGAAGCAATTGATGAAGCTCTTTCGAAAGGGAGTGCAAACAGTGGCATTGCTGCTTTTGTTGATGAAACTCCCTACATGAAGCTTTTCCTTGCAAGATACTGCAACAAATATACTATGATTGGCCCCATATTTAAAACCGATGGTCATGGCTTTGTATTTCCAAAACGCTCTCCTCTTCTACCCGATGTTTCCCAGGCAGTCCTAAATGTCACCGGAGGAGAAAAGATAATGAATATCGAAAACAAATGGTTCAAGAAAGACAGCAATTGTCAAGACTTTAGTAACCCAAAAGTTTCTAGCAATAGACTTGATTTTAAAAACTTTCGCGTCCTATTTTTCACTACTTGGGTGGCTTCAGGAGTGGCTCTCATCCTATATTTAGTTCGGTTCAGTTACAAGTATAGGGACGTTTGGAATTCTGAAACCTCTACGCTTAGAAGGATTGGGGCCATGTTGGGAAAGTTTTATGAAATAGACCCTTCTAGAAGCAACCAGAAAGCGGATGCAGTTACAGCCTCTACAAACCTCAATGGCACAGAAAGTCCAGAACTCGGCCAGAATTGGAACCAAACAAATACGAATTCTGTGTTTTCTTCTGATTCTGAAGAGCAACGAGCACCCTCAACTGATCGAGCATCTCCAGAAATAGCTACTACATCTACTGAGTCTGCTGCTGCAGTTCAAGAAATGCATTCAATTACTCCAGCTGAAACAGCTCAATAA

Protein Analysis

863

Amino Acids

95.88

Weight (kDa)

6.63

Isoelectric Point (pI)

33.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ANF_receptor PF01094 58 - 412 2.3e-79 Receptor family ligand binding region
Peripla_BP_6 PF13458 78 - 349 4.6e-16 Periplasmic binding protein
Lig_chan PF00060 540 - 739 7.7e-15 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1568
AccB7I CCANNNNNTGG 2 cut(s) 1274, 1365
AccII CGCG 1 cut(s) 2193
AccIII TCCGGA 1 cut(s) 435
AciI CCGC 1 cut(s) 2366
AclWI GGATC 5 cut(s) 106, 119, 1366, 1445, 1764
AcoI YGGCCR 3 cut(s) 87, 1234, 2419
AcsI RAATTY 5 cut(s) 826, 902, 1303, 2281, 2446
AcuI CTGAAG 3 cut(s) 816, 2205, 2490
AfaI GTAC 5 cut(s) 17, 318, 1045, 1677, 1808
AfiI CCNNNNNNNGG 9 cut(s) 330, 798, 1215, 1274, 1365, 1381, 1382, 2365, 2417
AflIII ACRYGT 1 cut(s) 1515
AgeI ACCGGT 1 cut(s) 1324
AhlI ACTAGT 1 cut(s) 523
AjnI CCWGG 3 cut(s) 1159, 1336, 2058
AjuI GAANNNNNNNTTGG 4 cut(s) 588, 620, 1014, 1046
Alw21I GWGCWC 3 cut(s) 443, 534, 2485
Alw26I GTCTC 6 cut(s) 289, 344, 369, 514, 616, 1350
AlwI GGATC 5 cut(s) 106, 119, 1366, 1445, 1764
Aor13HI TCCGGA 1 cut(s) 435
AoxI GGCC 9 cut(s) 87, 189, 332, 1234, 1334, 1503, 1987, 2313, 2419
ApeKI GCWGC 7 cut(s) 177, 275, 278, 641, 1916, 2537, 2540
ApoI RAATTY 5 cut(s) 826, 902, 1303, 2281, 2446
AseI ATTAAT 3 cut(s) 366, 1224, 1686
AsiGI ACCGGT 1 cut(s) 1324
Asp700I GAANNNNTTC 2 cut(s) 1101, 1949
AspS9I GGNCC 6 cut(s) 190, 332, 1121, 1322, 1988, 2313
AsuHPI GGTGA 1 cut(s) 2068
AsuII TTCGAA 1 cut(s) 1889
AvaII GGWCC 2 cut(s) 1121, 1322
BaeGI GKGCMC 1 cut(s) 393
BalI TGGCCA 1 cut(s) 89
BamHI GGATCC 1 cut(s) 111
BanI GGYRCC 1 cut(s) 1568
BanII GRGCYC 1 cut(s) 443
BbsI GAAGAC 1 cut(s) 691
Bbv12I GWGCWC 3 cut(s) 443, 534, 2485
BbvI GCAGC 7 cut(s) 164, 262, 290, 653, 1903, 2524, 2527
BceAI ACGGC 4 cut(s) 938, 1221, 1249, 1490
BciT130I CCWGG 3 cut(s) 1161, 1338, 2060
BciVI GTATCC 1 cut(s) 1618
BclI TGATCA 1 cut(s) 649
BcoDI GTCTC 6 cut(s) 289, 344, 369, 514, 616, 1350
BcuI ACTAGT 1 cut(s) 523
BfmI CTRYAG 3 cut(s) 276, 639, 2541
BfuI GTATCC 1 cut(s) 1618
BglII AGATCT 1 cut(s) 295
BisI GCNGC 7 cut(s) 178, 276, 279, 642, 1917, 2538, 2541
BlsI GCNGC 7 cut(s) 179, 277, 280, 643, 1918, 2539, 2542
BmcAI AGTACT 2 cut(s) 1045, 1677
Bme1390I CCNGG 3 cut(s) 1161, 1338, 2060
Bme18I GGWCC 2 cut(s) 1121, 1322
BmgT120I GGNCC 6 cut(s) 190, 332, 1121, 1322, 1988, 2313
BmiI GGNNCC 5 cut(s) 113, 1570, 1990, 2314, 2432
BmrFI CCNGG 3 cut(s) 1161, 1338, 2060
BmrI ACTGGG 1 cut(s) 110
BmsI GCATC 5 cut(s) 189, 574, 982, 2359, 2510
BmuI ACTGGG 1 cut(s) 110
BpiI GAAGAC 1 cut(s) 691
BplI GAGNNNNNCTC 6 cut(s) 1332, 1364, 1334, 1366, 2217, 2249
BpmI CTGGAG 4 cut(s) 1359, 1715, 2490, 2553
Bpu14I TTCGAA 1 cut(s) 1889
BpuEI CTTGAG 1 cut(s) 462
Bsa29I ATCGAT 1 cut(s) 1491
BsaAI YACGTR 2 cut(s) 552, 1806
BsaI GGTCTC 1 cut(s) 369
BsaJI CCNNGG 5 cut(s) 84, 744, 1159, 1237, 2058
BsaWI WCCGGW 6 cut(s) 435, 618, 912, 1324, 1478, 2078
BsaXI ACNNNNNCTCC 2 cut(s) 1395, 1425
Bsc4I CCNNNNNNNGG 9 cut(s) 330, 798, 1215, 1274, 1365, 1381, 1382, 2365, 2417
Bse118I RCCGGY 1 cut(s) 1324
Bse1I ACTGG 2 cut(s) 116, 335
Bse3DI GCAATG 3 cut(s) 1017, 1164, 1911
BseAI TCCGGA 1 cut(s) 435
BseBI CCWGG 3 cut(s) 1161, 1338, 2060
BseCI ATCGAT 1 cut(s) 1491
BseDI CCNNGG 5 cut(s) 84, 744, 1159, 1237, 2058
BseGI GGATG 8 cut(s) 214, 837, 973, 1205, 1423, 1477, 2235, 2374
BseLI CCNNNNNNNGG 9 cut(s) 330, 798, 1215, 1274, 1365, 1381, 1382, 2365, 2417
BseMI GCAATG 3 cut(s) 1017, 1164, 1911
BseMII CTCAG 3 cut(s) 300, 1419, 2520
BseNI ACTGG 2 cut(s) 116, 335
BseRI GAGGAG 2 cut(s) 2028, 2097
BseSI GKGCMC 1 cut(s) 393
BseX3I CGGCCG 1 cut(s) 1234
BseXI GCAGC 7 cut(s) 164, 262, 290, 653, 1903, 2524, 2527
BseYI CCCAGC 1 cut(s) 1169
BsgI GTGCAG 1 cut(s) 516
Bsh1236I CGCG 1 cut(s) 2193
Bsh1285I CGRYCG 2 cut(s) 1237, 1722
BshFI GGCC 9 cut(s) 89, 191, 334, 1236, 1336, 1505, 1989, 2315, 2421
BshNI GGYRCC 1 cut(s) 1568
BshTI ACCGGT 1 cut(s) 1324
BshVI ATCGAT 1 cut(s) 1491
BsiEI CGRYCG 2 cut(s) 1237, 1722
BsiHKAI GWGCWC 3 cut(s) 443, 534, 2485
BsiSI CCGG 6 cut(s) 436, 619, 913, 1325, 1479, 2079
BsiWI CGTACG 1 cut(s) 1806
BslFI GGGAC 3 cut(s) 266, 1048, 2285
BslI CCNNNNNNNGG 9 cut(s) 330, 798, 1215, 1274, 1365, 1381, 1382, 2365, 2417
BsmAI GTCTC 6 cut(s) 289, 344, 369, 514, 616, 1350
BsmFI GGGAC 3 cut(s) 266, 1048, 2285
BsmI GAATGC 1 cut(s) 2557
BsnI GGCC 9 cut(s) 89, 191, 334, 1236, 1336, 1505, 1989, 2315, 2421
Bso31I GGTCTC 1 cut(s) 369
Bsp119I TTCGAA 1 cut(s) 1889
Bsp1286I GDGCHC 4 cut(s) 393, 443, 534, 2485
Bsp13I TCCGGA 1 cut(s) 435
Bsp143I GATC 7 cut(s) 111, 295, 649, 1371, 1450, 1756, 2494
BspACI CCGC 1 cut(s) 2366
BspANI GGCC 9 cut(s) 89, 191, 334, 1236, 1336, 1505, 1989, 2315, 2421
BspCNI CTCAG 3 cut(s) 299, 1420, 2521
BspDI ATCGAT 1 cut(s) 1491
BspEI TCCGGA 1 cut(s) 435
BspFNI CGCG 1 cut(s) 2193
BspHI TCATGA 1 cut(s) 310
BspLI GGNNCC 5 cut(s) 113, 1570, 1990, 2314, 2432
BspMAI CTGCAG 3 cut(s) 280, 643, 2545
BspPI GGATC 5 cut(s) 106, 119, 1366, 1445, 1764
BspQI GCTCTTC 1 cut(s) 2466
BspT104I TTCGAA 1 cut(s) 1889
BspT107I GGYRCC 1 cut(s) 1568
BspTNI GGTCTC 1 cut(s) 369
BsrDI GCAATG 3 cut(s) 1017, 1164, 1911
BsrFI RCCGGY 1 cut(s) 1324
BsrI ACTGG 2 cut(s) 116, 335
BssAI RCCGGY 1 cut(s) 1324
BssECI CCNNGG 5 cut(s) 84, 744, 1159, 1237, 2058
BssMI GATC 7 cut(s) 111, 295, 649, 1371, 1450, 1756, 2494
BssT1I CCWWGG 2 cut(s) 84, 744
Bst2UI CCWGG 3 cut(s) 1161, 1338, 2060
Bst4CI ACNGT 3 cut(s) 1720, 1741, 1907
Bst6I CTCTTC 4 cut(s) 25, 747, 2046, 2466
BstBAI YACGTR 2 cut(s) 552, 1806
BstBI TTCGAA 1 cut(s) 1889
BstC8I GCNNGC 1 cut(s) 1579
BstDEI CTNAG 5 cut(s) 286, 732, 1428, 2300, 2529
BstDSI CCRYGG 1 cut(s) 1237
BstF5I GGATG 8 cut(s) 214, 837, 973, 1205, 1423, 1477, 2235, 2374
BstFNI CGCG 1 cut(s) 2193
BstKTI GATC 7 cut(s) 114, 298, 652, 1374, 1453, 1759, 2497
BstMAI GTCTC 6 cut(s) 289, 344, 369, 514, 616, 1350
BstMBI GATC 7 cut(s) 111, 295, 649, 1371, 1450, 1756, 2494
BstMCI CGRYCG 2 cut(s) 1237, 1722
BstMWI GCNNNNNNNGC 6 cut(s) 287, 494, 992, 1001, 2378, 2579
BstNI CCWGG 3 cut(s) 1161, 1338, 2060
BstNSI RCATGY 2 cut(s) 1314, 1519
BstSCI CCNGG 3 cut(s) 1159, 1336, 2058
BstSFI CTRYAG 3 cut(s) 276, 639, 2541
BstSLI GKGCMC 1 cut(s) 393
BstSNI TACGTA 2 cut(s) 552, 1806
BstUI CGCG 1 cut(s) 2193
BstV1I GCAGC 7 cut(s) 164, 262, 290, 653, 1903, 2524, 2527
BstV2I GAAGAC 1 cut(s) 691
BstX2I RGATCY 5 cut(s) 111, 295, 1371, 1450, 1756
BstXI CCANNNNNNTGG 3 cut(s) 512, 1012, 1849
BstYI RGATCY 5 cut(s) 111, 295, 1371, 1450, 1756
BstZI CGGCCG 1 cut(s) 1234
Bsu15I ATCGAT 1 cut(s) 1491
BsuI GTATCC 1 cut(s) 1618
BsuRI GGCC 9 cut(s) 89, 191, 334, 1236, 1336, 1505, 1989, 2315, 2421
BsuTUI ATCGAT 1 cut(s) 1491
BtgI CCRYGG 1 cut(s) 1237
BtgZI GCGATG 1 cut(s) 359
BtsCI GGATG 8 cut(s) 214, 837, 973, 1205, 1423, 1477, 2235, 2374
BtsIMutI CAGTG 3 cut(s) 159, 342, 1912
Cac8I GCNNGC 1 cut(s) 1579
CciI TCATGA 1 cut(s) 310
Cfr10I RCCGGY 1 cut(s) 1324
Cfr13I GGNCC 6 cut(s) 190, 332, 1121, 1322, 1988, 2313
ClaI ATCGAT 1 cut(s) 1491
CseI GACGC 1 cut(s) 2182
Csp6I GTAC 5 cut(s) 16, 317, 1044, 1676, 1807
CspAI ACCGGT 1 cut(s) 1324
CspCI CAANNNNNGTGG 2 cut(s) 1219, 1254
CviQI GTAC 5 cut(s) 16, 317, 1044, 1676, 1807
DdeI CTNAG 5 cut(s) 286, 732, 1428, 2300, 2529
DpnI GATC 7 cut(s) 113, 297, 651, 1373, 1452, 1758, 2496
DpnII GATC 7 cut(s) 111, 295, 649, 1371, 1450, 1756, 2494
DraI TTTAAA 2 cut(s) 1999, 2182
EaeI YGGCCR 3 cut(s) 87, 1234, 2419
EagI CGGCCG 1 cut(s) 1234
Eam1104I CTCTTC 4 cut(s) 25, 747, 2046, 2466
EarI CTCTTC 4 cut(s) 25, 747, 2046, 2466
Ecl136II GAGCTC 1 cut(s) 441
EclXI CGGCCG 1 cut(s) 1234
Eco105I TACGTA 2 cut(s) 552, 1806
Eco130I CCWWGG 2 cut(s) 84, 744
Eco24I GRGCYC 1 cut(s) 443
Eco31I GGTCTC 1 cut(s) 369
Eco47I GGWCC 2 cut(s) 1121, 1322
Eco52I CGGCCG 1 cut(s) 1234
Eco53kI GAGCTC 1 cut(s) 441
Eco57I CTGAAG 3 cut(s) 816, 2205, 2490
EcoICRI GAGCTC 1 cut(s) 441
EcoRI GAATTC 4 cut(s) 826, 902, 2281, 2446
EcoRII CCWGG 3 cut(s) 1159, 1336, 2058
EcoT14I CCWWGG 2 cut(s) 84, 744
EcoT22I ATGCAT 1 cut(s) 2559
EcoT38I GRGCYC 1 cut(s) 443
ErhI CCWWGG 2 cut(s) 84, 744
FalI AAGNNNNNCTT 2 cut(s) 1596, 1628
FaqI GGGAC 3 cut(s) 266, 1048, 2285
FauNDI CATATG 3 cut(s) 711, 1117, 1525
FbaI TGATCA 1 cut(s) 649
Fnu4HI GCNGC 7 cut(s) 178, 276, 279, 642, 1917, 2538, 2541
FokI GGATG 8 cut(s) 201, 824, 980, 1192, 1430, 1484, 2222, 2381
FriOI GRGCYC 1 cut(s) 443
Fsp4HI GCNGC 7 cut(s) 178, 276, 279, 642, 1917, 2538, 2541
GluI GCNGC 7 cut(s) 178, 276, 279, 642, 1917, 2538, 2541
GsaI CCCAGC 1 cut(s) 1173
GsuI CTGGAG 4 cut(s) 1359, 1715, 2490, 2553
HaeIII GGCC 9 cut(s) 89, 191, 334, 1236, 1336, 1505, 1989, 2315, 2421
HapII CCGG 6 cut(s) 436, 619, 913, 1325, 1479, 2079
HgaI GACGC 1 cut(s) 2182
HincII GTYRAC 4 cut(s) 121, 789, 1231, 1513
HindII GTYRAC 4 cut(s) 121, 789, 1231, 1513
HindIII AAGCTT 3 cut(s) 355, 1844, 1946
HinfI GANTC 9 cut(s) 254, 307, 696, 1155, 1343, 1482, 1838, 2465, 2531
HpaI GTTAAC 1 cut(s) 789
HpaII CCGG 6 cut(s) 436, 619, 913, 1325, 1479, 2079
HphI GGTGA 1 cut(s) 2068
Hpy166II GTNNAC 6 cut(s) 121, 789, 1083, 1231, 1425, 1513
Hpy188I TCNGA 8 cut(s) 199, 300, 374, 977, 1218, 2287, 2464, 2470
Hpy8I GTNNAC 6 cut(s) 121, 789, 1083, 1231, 1425, 1513
HpyAV CCTTC 5 cut(s) 429, 767, 1762, 2298, 2355
HpyCH4III ACNGT 3 cut(s) 1720, 1741, 1907
HpyCH4IV ACGT 4 cut(s) 315, 551, 1805, 2274
HpyF10VI GCNNNNNNNGC 6 cut(s) 287, 494, 992, 1001, 2378, 2579
HpyF3I CTNAG 5 cut(s) 286, 732, 1428, 2300, 2529
HpySE526I ACGT 4 cut(s) 315, 551, 1805, 2274
Kpn2I TCCGGA 1 cut(s) 435
Ksp22I TGATCA 1 cut(s) 649
KspAI GTTAAC 1 cut(s) 789
Kzo9I GATC 7 cut(s) 111, 295, 649, 1371, 1450, 1756, 2494
LguI GCTCTTC 1 cut(s) 2466
LmnI GCTCC 5 cut(s) 438, 438, 446, 915, 1241
Lsp1109I GCAGC 7 cut(s) 164, 262, 290, 653, 1903, 2524, 2527
LweI GCATC 5 cut(s) 189, 574, 982, 2359, 2510
MaeII ACGT 4 cut(s) 315, 551, 1805, 2274
MaeIII GTNAC 9 cut(s) 337, 1441, 1474, 1518, 1741, 2074, 2147, 2258, 2374
MalI GATC 7 cut(s) 113, 297, 651, 1373, 1452, 1758, 2496
MboI GATC 7 cut(s) 111, 295, 649, 1371, 1450, 1756, 2494
MfeI CAATTG 4 cut(s) 1017, 1251, 1872, 2131
MflI RGATCY 5 cut(s) 111, 295, 1371, 1450, 1756
MhlI GDGCHC 4 cut(s) 393, 443, 534, 2485
MlsI TGGCCA 1 cut(s) 89
MluNI TGGCCA 1 cut(s) 89
MlyI GAGTC 4 cut(s) 248, 705, 1352, 2540
MmeI TCCRAC 2 cut(s) 48, 1478
Mox20I TGGCCA 1 cut(s) 89
Mph1103I ATGCAT 1 cut(s) 2559
MroI TCCGGA 1 cut(s) 435
MroXI GAANNNNTTC 2 cut(s) 1101, 1949
MscI TGGCCA 1 cut(s) 89
MslI CAYNNNNRTG 2 cut(s) 185, 1010
Msp20I TGGCCA 1 cut(s) 89
MspA1I CMGCKG 2 cut(s) 281, 2573
MspI CCGG 6 cut(s) 436, 619, 913, 1325, 1479, 2079
MspR9I CCNGG 3 cut(s) 1161, 1338, 2060
MunI CAATTG 4 cut(s) 1017, 1251, 1872, 2131
Mva1269I GAATGC 1 cut(s) 2557
MvaI CCWGG 3 cut(s) 1161, 1338, 2060
MvnI CGCG 1 cut(s) 2193
MwoI GCNNNNNNNGC 6 cut(s) 287, 494, 992, 1001, 2378, 2579
NdeI CATATG 3 cut(s) 711, 1117, 1525
NdeII GATC 7 cut(s) 111, 295, 649, 1371, 1450, 1756, 2494
NlaIV GGNNCC 5 cut(s) 113, 1570, 1990, 2314, 2432
NmeAIII GCCGAG 1 cut(s) 2397
NmuCI GTSAC 2 cut(s) 337, 2074
NsiI ATGCAT 1 cut(s) 2559
NspI RCATGY 2 cut(s) 1314, 1519
NspV TTCGAA 1 cut(s) 1889
PagI TCATGA 1 cut(s) 310
PciI ACATGT 1 cut(s) 1515
PciSI GCTCTTC 1 cut(s) 2466
PctI GAATGC 1 cut(s) 2557
PdmI GAANNNNTTC 2 cut(s) 1101, 1949
PfeI GAWTC 5 cut(s) 307, 1155, 1482, 1838, 2465
Pfl23II CGTACG 1 cut(s) 1806
PflMI CCANNNNNTGG 2 cut(s) 1274, 1365
PinAI ACCGGT 1 cut(s) 1324
PkrI GCNGC 7 cut(s) 179, 277, 280, 643, 1918, 2539, 2542
PleI GAGTC 4 cut(s) 248, 704, 1351, 2539
PpsI GAGTC 4 cut(s) 248, 704, 1351, 2539
Ppu21I YACGTR 2 cut(s) 552, 1806
PscI ACATGT 1 cut(s) 1515
PshBI ATTAAT 3 cut(s) 366, 1224, 1686
Psp124BI GAGCTC 1 cut(s) 443
Psp6I CCWGG 3 cut(s) 1159, 1336, 2058
PspFI CCCAGC 1 cut(s) 1169
PspGI CCWGG 3 cut(s) 1159, 1336, 2058
PspLI CGTACG 1 cut(s) 1806
PspN4I GGNNCC 5 cut(s) 113, 1570, 1990, 2314, 2432
PspPI GGNCC 6 cut(s) 190, 332, 1121, 1322, 1988, 2313
PstI CTGCAG 3 cut(s) 280, 643, 2545
PsuI RGATCY 5 cut(s) 111, 295, 1371, 1450, 1756
PvuII CAGCTG 2 cut(s) 281, 2573
RsaI GTAC 5 cut(s) 17, 318, 1045, 1677, 1808
RsaNI GTAC 5 cut(s) 16, 317, 1044, 1676, 1807
RseI CAYNNNNRTG 2 cut(s) 185, 1010
SacI GAGCTC 1 cut(s) 443
SapI GCTCTTC 1 cut(s) 2466
SatI GCNGC 7 cut(s) 178, 276, 279, 642, 1917, 2538, 2541
Sau3AI GATC 7 cut(s) 111, 295, 649, 1371, 1450, 1756, 2494
Sau96I GGNCC 6 cut(s) 190, 332, 1121, 1322, 1988, 2313
ScaI AGTACT 2 cut(s) 1045, 1677
SchI GAGTC 4 cut(s) 248, 705, 1352, 2540
ScrFI CCNGG 3 cut(s) 1161, 1338, 2060
SduI GDGCHC 4 cut(s) 393, 443, 534, 2485
SfaNI GCATC 5 cut(s) 189, 574, 982, 2359, 2510
SfcI CTRYAG 3 cut(s) 276, 639, 2541
SfuI TTCGAA 1 cut(s) 1889
SinI GGWCC 2 cut(s) 1121, 1322
SmiMI CAYNNNNRTG 2 cut(s) 185, 1010
SmlI CTYRAG 1 cut(s) 477
SmoI CTYRAG 1 cut(s) 477
SnaBI TACGTA 2 cut(s) 552, 1806
SpeI ACTAGT 1 cut(s) 523
SsiI CCGC 1 cut(s) 2366
SstI GAGCTC 1 cut(s) 443
StyD4I CCNGG 3 cut(s) 1159, 1336, 2058
StyI CCWWGG 2 cut(s) 84, 744
TaaI ACNGT 3 cut(s) 1720, 1741, 1907
TaiI ACGT 4 cut(s) 318, 554, 1808, 2277
TaqI TCGA 7 cut(s) 257, 1145, 1491, 1722, 1889, 2103, 2497
TatI WGTACW 3 cut(s) 15, 1043, 1675
TfiI GAWTC 5 cut(s) 307, 1155, 1482, 1838, 2465
TscAI CASTG 3 cut(s) 159, 342, 1912
TseFI GTSAC 2 cut(s) 337, 2074
TseI GCWGC 7 cut(s) 177, 275, 278, 641, 1916, 2537, 2540
Tsp45I GTSAC 2 cut(s) 337, 2074
TspGWI ACGGA 1 cut(s) 1484
TspRI CASTG 3 cut(s) 159, 342, 1912
Van91I CCANNNNNTGG 2 cut(s) 1274, 1365
VpaK11BI GGWCC 2 cut(s) 1121, 1322
VspI ATTAAT 3 cut(s) 366, 1224, 1686
XapI RAATTY 5 cut(s) 826, 902, 1303, 2281, 2446
XbaI TCTAGA 2 cut(s) 292, 2348
XceI RCATGY 2 cut(s) 1314, 1519
XcmI CCANNNNNNNNNTGG 1 cut(s) 848
XmnI GAANNNNTTC 2 cut(s) 1101, 1949
ZrmI AGTACT 2 cut(s) 1045, 1677
Zsp2I ATGCAT 1 cut(s) 2559
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.