Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000218.1

Orthogroup ID

OG0000051

Physical Location & Seq

Genomic Coordinates Forward (+)

248402 .. 253290

Gene Structure 4889 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000218.1_g000059.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1698 bp

atgatgaagatgatcaagaatattcatatcatctctctttcttattctctctttttagtcttctctagtattttcgcggccgtgacggcacagaataatccggtgaatgtggaagtcggggtggttcttgatttcgatacggggtttgggaagatggggctgagctgcatcaaaatgtctctctctgacttctacgcctctcatcccaattacaccaccaggctgcttctgcaccagaggaactcacccacagacgttgttcttacagctgctgcagctctggacctaataaataatgttgaagtgcaagccatcataggcccagaatcttcaatgcaggccaacttcgttataagcctcggaaacaaatcccatgttcctataatctcattttccgccacaagcccatctctcacttcaatccgcaccccgtacttcatccgcgccactcaaaacgactcgtcgcaggtcaaagccataagcgccctaatccaagctttcggttggcgacaagtcgtccccatctacgtagacaacgagttcggcgagggggtcatcccctacctctccgatgctctacaacaagtcgacgtccgaatcccttaccgggccgtactttcgtcaagggccgacgatgaccagatcgaaacggagcttttgaaattgatggccatgcagacaagggtcttcatcgtccacatgttgcctgaacttggtactagggttttcgagagggctaaggagattgggatgatggatgaaggttatgtttggataatgaccgatggaatgttcaacatgtttagctatattagtttcggttccgtggtggaaaatatgcaaggggctttgggtttgaaaccctatgttccaattcaacagctccaaccaactgttactgacgtaaacttgcttctgaagaatggggacaatgttggataccaatcaggttcgtttgtttatgggattttgaaacagctaggatttcaggataataagctcaggacctatgatactgttgaacaattgaacgaactttttcgtaatgggactgcaaataatgggatagcggctgcattcgacgagaccccctatatgaaattgtttcttgcaacttattgctcgaaatacaccatggttgagccaacgttcaaagctgatggttttgcctttgtcttcccaaaagactcacctcttgctcgcgatgtttcaagggcaatcttaaatgtgaatgagggaggtgaaatggacaagattgaggatagatggttcaaaaaacaacagagttgtcaaaatacaagcaacaacaatgtctcgtccaacagtcttagcctcgagagtttttggggcctcttcctcattgccggggttgcttcatcattggctctcctcatatttgttgccatgttcttgtatgaacacaaggacattcgcttggattcagaatcttcattttggagaaaagttctcgtcatgttaagaatttatgaccaaaaagacctcagcagccatacttttaagaagagtggactgcaatttcacaccaactatccctcgagtccatcaagctattcaaaccacactgaagcacacaacgtgttttcggagcagtcaacatcttctcctgagcatggtgatttgagtcccactaatggtcaatcaaccagagagattgaattagctattgagcatccttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0007154 GO:0007165 GO:0008066 GO:0008150 GO:0008324 GO:0009719 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0043200 GO:0044464 GO:0046873 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

565

Amino Acids

63.13

Weight (kDa)

5.44

Isoelectric Point (pI)

40.96

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000051)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca	FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica	MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica	Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis	pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis	RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata	RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora	Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii	Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa	Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha	Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana	Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	353
AatII	GACGTC	1 cut(s)	594
Acc36I	ACCTGC	1 cut(s)	457
AccI	GTMKAC	2 cut(s)	531, 588
AccII	CGCG	3 cut(s)	77, 444, 1203
AciI	CCGC	5 cut(s)	77, 396, 424, 442, 1070
AclI	AACGTT	1 cut(s)	1148
AcoI	YGGCCR	2 cut(s)	78, 669
AcsI	RAATTY	1 cut(s)	1482
AcuI	CTGAAG	2 cut(s)	938, 1605
AcyI	GRCGYC	1 cut(s)	591
AdeI	CACNNNGTG	1 cut(s)	1597
AfaI	GTAC	3 cut(s)	434, 615, 718
AfiI	CCNNNNNNNGG	4 cut(s)	607, 713, 1631, 1652
AflIII	ACRYGT	3 cut(s)	699, 798, 1596
AhdI	GACNNNNNGTC	1 cut(s)	515
AjnI	CCWGG	1 cut(s)	218
AloI	GAACNNNNNNTCC	2 cut(s)	1253, 1285
Alw26I	GTCTC	3 cut(s)	183, 1079, 1318
AlwNI	CAGNNNCTG	1 cut(s)	272
Ama87I	CYCGRG	2 cut(s)	1334, 1555
AoxI	GGCC	7 cut(s)	78, 319, 339, 609, 627, 669, 1348
ApeKI	GCWGC	7 cut(s)	165, 223, 269, 272, 275, 1073, 1506
ApoI	RAATTY	1 cut(s)	1482
ArsI	GACNNNNNNTTYG	2 cut(s)	524, 556
Asp700I	GAANNNNTTC	1 cut(s)	1038
AspLEI	GCGC	2 cut(s)	446, 485
AspS9I	GGNCC	6 cut(s)	283, 320, 609, 627, 1005, 1348
AsuC2I	CCSGG	2 cut(s)	608, 1366
AsuHPI	GGTGA	5 cut(s)	115, 237, 1182, 1253, 1646
AvaI	CYCGRG	2 cut(s)	1334, 1555
AvaII	GGWCC	2 cut(s)	283, 1005
BaeI	ACNNNNGTAYC	2 cut(s)	708, 741
BalI	TGGCCA	1 cut(s)	671
BarI	GAAGNNNNNNTAC	2 cut(s)	897, 929
BbsI	GAAGAC	3 cut(s)	52, 679, 1168
BbvCI	CCTCAGC	1 cut(s)	1502
BbvI	GCAGC	7 cut(s)	152, 210, 256, 259, 287, 1060, 1518
BceAI	ACGGC	3 cut(s)	65, 102, 596
BciT130I	CCWGG	1 cut(s)	220
BciVI	GTATCC	1 cut(s)	932
BclI	TGATCA	1 cut(s)	12
BcnI	CCSGG	2 cut(s)	608, 1366
BcoDI	GTCTC	3 cut(s)	183, 1079, 1318
BfaI	CTAG	3 cut(s)	66, 720, 980
BfmI	CTRYAG	1 cut(s)	273
BfoI	RGCGCY	1 cut(s)	486
BfuAI	ACCTGC	1 cut(s)	457
BfuI	GTATCC	1 cut(s)	932
BglI	GCCNNNNNGGC	1 cut(s)	86
BisI	GCNGC	9 cut(s)	78, 166, 224, 270, 273, 276, 1071, 1074, 1507
BlpI	GCTNAGC	1 cut(s)	161
BlsI	GCNGC	9 cut(s)	79, 167, 225, 271, 274, 277, 1072, 1075, 1508
Bme1390I	CCNGG	3 cut(s)	220, 608, 1366
Bme18I	GGWCC	2 cut(s)	283, 1005
BmeRI	GACNNNNNGTC	1 cut(s)	515
BmeT110I	CYCGRG	2 cut(s)	1334, 1555
BmgT120I	GGNCC	6 cut(s)	283, 320, 609, 627, 1005, 1348
BmiI	GGNNCC	2 cut(s)	823, 1349
BmrFI	CCNGG	3 cut(s)	220, 608, 1366
BmsI	GCATC	2 cut(s)	177, 562
BoxI	GACNNNNGTC	1 cut(s)	683
BpiI	GAAGAC	3 cut(s)	52, 679, 1168
Bpu10I	CCTNAGC	4 cut(s)	738, 1001, 1502, 1626
Bpu1102I	GCTNAGC	1 cut(s)	161
BpuMI	CCSGG	2 cut(s)	608, 1366
BsaAI	YACGTR	1 cut(s)	529
BsaBI	GATNNNNATC	1 cut(s)	943
BsaHI	GRCGYC	1 cut(s)	591
BsaI	GGTCTC	1 cut(s)	1079
BsaJI	CCNNGG	4 cut(s)	358, 825, 1134, 1365
BsaWI	WCCGGW	1 cut(s)	100
BsaXI	ACNNNNNCTCC	2 cut(s)	1606, 1636
Bsc4I	CCNNNNNNNGG	4 cut(s)	607, 713, 1631, 1652
Bse3DI	GCAATG	1 cut(s)	1359
Bse8I	GATNNNNATC	1 cut(s)	943
BseBI	CCWGG	1 cut(s)	220
BseDI	CCNNGG	4 cut(s)	358, 825, 1134, 1365
BseGI	GGATG	6 cut(s)	202, 438, 555, 756, 763, 1690
BseJI	GATNNNNATC	1 cut(s)	943
BseLI	CCNNNNNNNGG	4 cut(s)	607, 713, 1631, 1652
BseMI	GCAATG	1 cut(s)	1359
BseMII	CTCAG	4 cut(s)	152, 1015, 1516, 1617
BseRI	GAGGAG	1 cut(s)	1379
BseX3I	CGGCCG	1 cut(s)	78
BseXI	GCAGC	7 cut(s)	152, 210, 256, 259, 287, 1060, 1518
BsgI	GTGCAG	1 cut(s)	215
Bsh1236I	CGCG	3 cut(s)	77, 444, 1203
Bsh1285I	CGRYCG	1 cut(s)	81
BshFI	GGCC	7 cut(s)	80, 321, 341, 611, 629, 671, 1350
BsiEI	CGRYCG	1 cut(s)	81
BsiHKCI	CYCGRG	2 cut(s)	1334, 1555
BsiSI	CCGG	3 cut(s)	101, 607, 1365
BslFI	GGGAC	4 cut(s)	503, 941, 1063, 1629
BslI	CCNNNNNNNGG	4 cut(s)	607, 713, 1631, 1652
BsmAI	GTCTC	3 cut(s)	183, 1079, 1318
BsmFI	GGGAC	4 cut(s)	503, 941, 1063, 1629
BsmI	GAATGC	1 cut(s)	1076
BsnI	GGCC	7 cut(s)	80, 321, 341, 611, 629, 671, 1350
Bso31I	GGTCTC	1 cut(s)	1079
BsoBI	CYCGRG	2 cut(s)	1334, 1555
Bsp143I	GATC	2 cut(s)	12, 642
Bsp1720I	GCTNAGC	1 cut(s)	161
Bsp19I	CCATGG	1 cut(s)	1134
Bsp68I	TCGCGA	1 cut(s)	1203
BspACI	CCGC	5 cut(s)	77, 396, 424, 442, 1070
BspANI	GGCC	7 cut(s)	80, 321, 341, 611, 629, 671, 1350
BspCNI	CTCAG	4 cut(s)	153, 1014, 1515, 1618
BspFNI	CGCG	3 cut(s)	77, 444, 1203
BspLI	GGNNCC	2 cut(s)	823, 1349
BspMAI	CTGCAG	1 cut(s)	277
BspMI	ACCTGC	1 cut(s)	457
BspTNI	GGTCTC	1 cut(s)	1079
BsrDI	GCAATG	1 cut(s)	1359
BssECI	CCNNGG	4 cut(s)	358, 825, 1134, 1365
BssMI	GATC	2 cut(s)	12, 642
BssNI	GRCGYC	1 cut(s)	591
BssT1I	CCWWGG	1 cut(s)	1134
Bst2UI	CCWGG	1 cut(s)	220
Bst4CI	ACNGT	3 cut(s)	895, 1018, 1325
Bst6I	CTCTTC	2 cut(s)	1358, 1517
BstACI	GRCGYC	1 cut(s)	591
BstBAI	YACGTR	1 cut(s)	529
BstC8I	GCNNGC	3 cut(s)	309, 339, 1201
BstDEI	CTNAG	7 cut(s)	161, 738, 1001, 1328, 1502, 1626, 1695
BstDSI	CCRYGG	2 cut(s)	825, 1134
BstF5I	GGATG	6 cut(s)	202, 438, 555, 756, 763, 1690
BstFNI	CGCG	3 cut(s)	77, 444, 1203
BstH2I	RGCGCY	1 cut(s)	486
BstHHI	GCGC	2 cut(s)	446, 485
BstKTI	GATC	2 cut(s)	15, 645
BstMAI	GTCTC	3 cut(s)	183, 1079, 1318
BstMBI	GATC	2 cut(s)	12, 642
BstMCI	CGRYCG	1 cut(s)	81
BstMWI	GCNNNNNNNGC	5 cut(s)	86, 229, 275, 482, 1370
BstNI	CCWGG	1 cut(s)	220
BstNSI	RCATGY	2 cut(s)	703, 802
BstPAI	GACNNNNGTC	1 cut(s)	683
BstSCI	CCNGG	3 cut(s)	218, 606, 1364
BstSFI	CTRYAG	1 cut(s)	273
BstSNI	TACGTA	1 cut(s)	529
BstUI	CGCG	3 cut(s)	77, 444, 1203
BstV1I	GCAGC	7 cut(s)	152, 210, 256, 259, 287, 1060, 1518
BstV2I	GAAGAC	3 cut(s)	52, 679, 1168
BstZI	CGGCCG	1 cut(s)	78
BsuI	GTATCC	1 cut(s)	932
BsuRI	GGCC	7 cut(s)	80, 321, 341, 611, 629, 671, 1350
BtgI	CCRYGG	2 cut(s)	825, 1134
BtgZI	GCGATG	1 cut(s)	1218
BtsCI	GGATG	6 cut(s)	202, 438, 555, 756, 763, 1690
BtsIMutI	CAGTG	1 cut(s)	1581
BtuMI	TCGCGA	1 cut(s)	1203
BveI	ACCTGC	1 cut(s)	457
Cac8I	GCNNGC	3 cut(s)	309, 339, 1201
CaiI	CAGNNNCTG	1 cut(s)	272
CfoI	GCGC	2 cut(s)	446, 485
Cfr13I	GGNCC	6 cut(s)	283, 320, 609, 627, 1005, 1348
Csp6I	GTAC	3 cut(s)	433, 614, 717
CspCI	CAANNNNNGTGG	2 cut(s)	238, 273
CviAII	CATG	8 cut(s)	374, 673, 700, 799, 1135, 1405, 1474, 1631
CviQI	GTAC	3 cut(s)	433, 614, 717
DdeI	CTNAG	7 cut(s)	161, 738, 1001, 1328, 1502, 1626, 1695
DpnI	GATC	2 cut(s)	14, 644
DpnII	GATC	2 cut(s)	12, 642
DraIII	CACNNNGTG	1 cut(s)	1597
DriI	GACNNNNNGTC	1 cut(s)	515
EaeI	YGGCCR	2 cut(s)	78, 669
EagI	CGGCCG	1 cut(s)	78
Eam1104I	CTCTTC	2 cut(s)	1358, 1517
Eam1105I	GACNNNNNGTC	1 cut(s)	515
EarI	CTCTTC	2 cut(s)	1358, 1517
EciI	GGCGGA	1 cut(s)	385
EclXI	CGGCCG	1 cut(s)	78
Eco105I	TACGTA	1 cut(s)	529
Eco130I	CCWWGG	1 cut(s)	1134
Eco31I	GGTCTC	1 cut(s)	1079
Eco47I	GGWCC	2 cut(s)	283, 1005
Eco52I	CGGCCG	1 cut(s)	78
Eco57I	CTGAAG	2 cut(s)	938, 1605
Eco88I	CYCGRG	2 cut(s)	1334, 1555
EcoO109I	RGGNCCY	2 cut(s)	1005, 1348
EcoRII	CCWGG	1 cut(s)	218
EcoT14I	CCWWGG	1 cut(s)	1134
ErhI	CCWWGG	1 cut(s)	1134
FaeI	CATG	8 cut(s)	377, 676, 703, 802, 1138, 1408, 1477, 1634
FaqI	GGGAC	4 cut(s)	503, 941, 1063, 1629
FatI	CATG	8 cut(s)	373, 672, 699, 798, 1134, 1404, 1473, 1630
FbaI	TGATCA	1 cut(s)	12
FblI	GTMKAC	2 cut(s)	531, 588
Fnu4HI	GCNGC	9 cut(s)	78, 166, 224, 270, 273, 276, 1071, 1074, 1507
FokI	GGATG	6 cut(s)	189, 425, 542, 763, 770, 1677
Fsp4HI	GCNGC	9 cut(s)	78, 166, 224, 270, 273, 276, 1071, 1074, 1507
FspBI	CTAG	3 cut(s)	66, 720, 980
GlaI	GCGC	2 cut(s)	445, 484
GluI	GCNGC	9 cut(s)	78, 166, 224, 270, 273, 276, 1071, 1074, 1507
HaeII	RGCGCY	1 cut(s)	486
HaeIII	GGCC	7 cut(s)	80, 321, 341, 611, 629, 671, 1350
HapII	CCGG	3 cut(s)	101, 607, 1365
HhaI	GCGC	2 cut(s)	446, 485
Hin1I	GRCGYC	1 cut(s)	591
Hin1II	CATG	8 cut(s)	377, 676, 703, 802, 1138, 1408, 1477, 1634
Hin6I	GCGC	2 cut(s)	444, 483
HinP1I	GCGC	2 cut(s)	444, 483
HincII	GTYRAC	2 cut(s)	589, 1614
HindII	GTYRAC	2 cut(s)	589, 1614
HindIII	AAGCTT	1 cut(s)	495
HinfI	GANTC	8 cut(s)	326, 458, 597, 1187, 1439, 1445, 1558, 1642
HpaII	CCGG	3 cut(s)	101, 607, 1365
HphI	GGTGA	5 cut(s)	115, 237, 1182, 1253, 1646
Hpy166II	GTNNAC	6 cut(s)	532, 589, 697, 907, 1529, 1614
Hpy188I	TCNGA	7 cut(s)	187, 362, 571, 596, 918, 1444, 1606
Hpy188III	TCNNGA	9 cut(s)	16, 128, 281, 730, 989, 1003, 1202, 1336, 1625
Hpy8I	GTNNAC	6 cut(s)	532, 589, 697, 907, 1529, 1614
Hpy99I	CGWCG	4 cut(s)	466, 593, 635, 1085
HpyAV	CCTTC	1 cut(s)	755
HpyCH4III	ACNGT	3 cut(s)	895, 1018, 1325
HpyCH4IV	ACGT	6 cut(s)	255, 528, 591, 903, 1148, 1596
HpyF10VI	GCNNNNNNNGC	5 cut(s)	86, 229, 275, 482, 1370
HpyF3I	CTNAG	7 cut(s)	161, 738, 1001, 1328, 1502, 1626, 1695
HpySE526I	ACGT	6 cut(s)	255, 528, 591, 903, 1148, 1596
Hsp92I	GRCGYC	1 cut(s)	591
Hsp92II	CATG	8 cut(s)	377, 676, 703, 802, 1138, 1408, 1477, 1634
HspAI	GCGC	2 cut(s)	444, 483
Ksp22I	TGATCA	1 cut(s)	12
Kzo9I	GATC	2 cut(s)	12, 642
LmnI	GCTCC	3 cut(s)	652, 888, 1606
Lsp1109I	GCAGC	7 cut(s)	152, 210, 256, 259, 287, 1060, 1518
LweI	GCATC	2 cut(s)	177, 562
MaeI	CTAG	3 cut(s)	66, 720, 980
MaeII	ACGT	6 cut(s)	255, 528, 591, 903, 1148, 1596
MaeIII	GTNAC	2 cut(s)	82, 895
MalI	GATC	2 cut(s)	14, 644
MboI	GATC	2 cut(s)	12, 642
MfeI	CAATTG	1 cut(s)	1025
MlsI	TGGCCA	1 cut(s)	671
MluCI	AATT	8 cut(s)	208, 662, 873, 1025, 1100, 1482, 1535, 1676
MluNI	TGGCCA	1 cut(s)	671
MlyI	GAGTC	4 cut(s)	452, 1181, 1567, 1651
MmeI	TCCRAC	3 cut(s)	910, 916, 1344
Mox20I	TGGCCA	1 cut(s)	671
MroXI	GAANNNNTTC	1 cut(s)	1038
MscI	TGGCCA	1 cut(s)	671
MseI	TTAA	3 cut(s)	1223, 1478, 1518
MslI	CAYNNNNRTG	1 cut(s)	173
Msp20I	TGGCCA	1 cut(s)	671
MspA1I	CMGCKG	1 cut(s)	269
MspI	CCGG	3 cut(s)	101, 607, 1365
MspR9I	CCNGG	3 cut(s)	220, 608, 1366
MunI	CAATTG	1 cut(s)	1025
Mva1269I	GAATGC	1 cut(s)	1076
MvaI	CCWGG	1 cut(s)	220
MvnI	CGCG	3 cut(s)	77, 444, 1203
MwoI	GCNNNNNNNGC	5 cut(s)	86, 229, 275, 482, 1370
NciI	CCSGG	2 cut(s)	608, 1366
NcoI	CCATGG	1 cut(s)	1134
NdeII	GATC	2 cut(s)	12, 642
NlaIII	CATG	8 cut(s)	377, 676, 703, 802, 1138, 1408, 1477, 1634
NlaIV	GGNNCC	2 cut(s)	823, 1349
NmuCI	GTSAC	1 cut(s)	82
NruI	TCGCGA	1 cut(s)	1203
NspI	RCATGY	2 cut(s)	703, 802
PaeR7I	CTCGAG	2 cut(s)	1334, 1555
PciI	ACATGT	2 cut(s)	699, 798
PcsI	WCGNNNNNNNCGW	2 cut(s)	534, 543
PctI	GAATGC	1 cut(s)	1076
PdmI	GAANNNNTTC	1 cut(s)	1038
PfeI	GAWTC	4 cut(s)	326, 597, 1439, 1445
PkrI	GCNGC	9 cut(s)	79, 167, 225, 271, 274, 277, 1072, 1075, 1508
PleI	GAGTC	4 cut(s)	452, 1181, 1566, 1650
PpsI	GAGTC	4 cut(s)	452, 1181, 1566, 1650
Ppu21I	YACGTR	1 cut(s)	529
PpuMI	RGGWCCY	1 cut(s)	1005
PscI	ACATGT	2 cut(s)	699, 798
PshAI	GACNNNNGTC	1 cut(s)	683
PsiI	TTATAA	1 cut(s)	353
Psp1406I	AACGTT	1 cut(s)	1148
Psp5II	RGGWCCY	1 cut(s)	1005
Psp6I	CCWGG	1 cut(s)	218
PspGI	CCWGG	1 cut(s)	218
PspN4I	GGNNCC	2 cut(s)	823, 1349
PspPI	GGNCC	6 cut(s)	283, 320, 609, 627, 1005, 1348
PspPPI	RGGWCCY	1 cut(s)	1005
PspXI	VCTCGAGB	1 cut(s)	1555
PstI	CTGCAG	1 cut(s)	277
PstNI	CAGNNNCTG	1 cut(s)	272
PvuII	CAGCTG	1 cut(s)	269
RruI	TCGCGA	1 cut(s)	1203
RsaI	GTAC	3 cut(s)	434, 615, 718
RsaNI	GTAC	3 cut(s)	433, 614, 717
RseI	CAYNNNNRTG	1 cut(s)	173
SalI	GTCGAC	1 cut(s)	587
SaqAI	TTAA	3 cut(s)	1223, 1478, 1518
SatI	GCNGC	9 cut(s)	78, 166, 224, 270, 273, 276, 1071, 1074, 1507
Sau3AI	GATC	2 cut(s)	12, 642
Sau96I	GGNCC	6 cut(s)	283, 320, 609, 627, 1005, 1348
SchI	GAGTC	4 cut(s)	452, 1181, 1567, 1651
ScrFI	CCNGG	3 cut(s)	220, 608, 1366
SfaNI	GCATC	2 cut(s)	177, 562
SfcI	CTRYAG	1 cut(s)	273
Sfr274I	CTCGAG	2 cut(s)	1334, 1555
SinI	GGWCC	2 cut(s)	283, 1005
SlaI	CTCGAG	2 cut(s)	1334, 1555
SmiMI	CAYNNNNRTG	1 cut(s)	173
SmlI	CTYRAG	2 cut(s)	1334, 1555
SmoI	CTYRAG	2 cut(s)	1334, 1555
SnaBI	TACGTA	1 cut(s)	529
Sse9I	AATT	8 cut(s)	208, 662, 873, 1025, 1100, 1482, 1535, 1676
SsiI	CCGC	5 cut(s)	77, 396, 424, 442, 1070
SspI	AATATT	1 cut(s)	22
SspMI	CTAG	3 cut(s)	66, 720, 980
StyD4I	CCNGG	3 cut(s)	218, 606, 1364
StyI	CCWWGG	1 cut(s)	1134
TaaI	ACNGT	3 cut(s)	895, 1018, 1325
TaiI	ACGT	6 cut(s)	258, 531, 594, 906, 1151, 1599
TaqI	TCGA	8 cut(s)	135, 588, 645, 729, 1080, 1124, 1335, 1556
TaqII	GACCGA	1 cut(s)	797
TasI	AATT	8 cut(s)	208, 662, 873, 1025, 1100, 1482, 1535, 1676
TauI	GCSGC	2 cut(s)	80, 1073
TfiI	GAWTC	4 cut(s)	326, 597, 1439, 1445
Tru1I	TTAA	3 cut(s)	1223, 1478, 1518
Tru9I	TTAA	3 cut(s)	1223, 1478, 1518
TscAI	CASTG	1 cut(s)	1588
TseFI	GTSAC	1 cut(s)	82
TseI	GCWGC	7 cut(s)	165, 223, 269, 272, 275, 1073, 1506
Tsp45I	GTSAC	1 cut(s)	82
TspDTI	ATGAA	9 cut(s)	14, 20, 427, 679, 774, 1112, 1365, 1431, 1440
TspGWI	ACGGA	2 cut(s)	665, 814
TspRI	CASTG	1 cut(s)	1588
VpaK11BI	GGWCC	2 cut(s)	283, 1005
XapI	RAATTY	1 cut(s)	1482
XceI	RCATGY	2 cut(s)	703, 802
XhoI	CTCGAG	2 cut(s)	1334, 1555
XmiI	GTMKAC	2 cut(s)	531, 588
XmnI	GAANNNNTTC	1 cut(s)	1038
XspI	CTAG	3 cut(s)	66, 720, 980
ZraI	GACGTC	1 cut(s)	592

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.