Glutamate receptor
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Peripla_BP_6 | PF13458 | 38 - 340 | 2.1e-13 | Periplasmic binding protein |
| ANF_receptor | PF01094 | 55 - 408 | 2e-80 | Receptor family ligand binding region |
| Lig_chan-Glu_bd | PF10613 | 482 - 579 | 3.7e-13 | Ligated ion channel L-glutamate- and glycine-binding site |
| SBP_bac_3 | PF00497 | 492 - 818 | 4.2e-11 | Bacterial extracellular solute-binding proteins, family 3 |
| Lig_chan | PF00060 | 598 - 851 | 3.9e-40 | Ligand-gated ion channel |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 350, 1551 |
| AatII | GACGTC | 1 cut(s) | 591 |
| Acc36I | ACCTGC | 1 cut(s) | 454 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1262 |
| AccBSI | CCGCTC | 2 cut(s) | 423, 446 |
| AccI | GTMKAC | 1 cut(s) | 528 |
| AccII | CGCG | 3 cut(s) | 74, 441, 2382 |
| AciI | CCGC | 8 cut(s) | 74, 83, 393, 421, 439, 444, 2028, 2249 |
| AclI | AACGTT | 1 cut(s) | 2327 |
| AcoI | YGGCCR | 3 cut(s) | 75, 666, 996 |
| AcsI | RAATTY | 3 cut(s) | 1057, 1282, 2661 |
| AcuI | CTGAAG | 3 cut(s) | 1187, 2117, 2775 |
| AcyI | GRCGYC | 1 cut(s) | 588 |
| AfaI | GTAC | 4 cut(s) | 431, 612, 715, 874 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 604, 710, 1262, 1394, 2801, 2830 |
| AflIII | ACRYGT | 2 cut(s) | 171, 795 |
| AgeI | ACCGGT | 1 cut(s) | 1674 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 512 |
| AhlI | ACTAGT | 2 cut(s) | 1117, 1325 |
| AjnI | CCWGG | 3 cut(s) | 215, 931, 1348 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1611, 1643 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2432, 2464 |
| Alw21I | GWGCWC | 1 cut(s) | 885 |
| Alw26I | GTCTC | 3 cut(s) | 1347, 2258, 2497 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 269, 1715 |
| Ama87I | CYCGRG | 2 cut(s) | 884, 2513 |
| ApoI | RAATTY | 3 cut(s) | 1057, 1282, 2661 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 357, 389, 521, 553 |
| AsiGI | ACCGGT | 1 cut(s) | 1674 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1623, 2217 |
| AspLEI | GCGC | 3 cut(s) | 443, 482, 2761 |
| AspS9I | GGNCC | 9 cut(s) | 280, 317, 606, 624, 1677, 1792, 1880, 2184, 2527 |
| AsuC2I | CCSGG | 1 cut(s) | 605 |
| AsuHPI | GGTGA | 6 cut(s) | 112, 1066, 1883, 2361, 2432, 2816 |
| AsuII | TTCGAA | 1 cut(s) | 1512 |
| AvaI | CYCGRG | 2 cut(s) | 884, 2513 |
| AvaII | GGWCC | 4 cut(s) | 280, 1677, 1792, 2184 |
| BaeGI | GKGCMC | 1 cut(s) | 1737 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 705, 738 |
| BalI | TGGCCA | 2 cut(s) | 668, 998 |
| BanII | GRGCYC | 2 cut(s) | 885, 976 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2076, 2108 |
| BbsI | GAAGAC | 6 cut(s) | 49, 676, 1103, 1501, 1875, 2347 |
| Bbv12I | GWGCWC | 1 cut(s) | 885 |
| BbvCI | CCTCAGC | 1 cut(s) | 2681 |
| BceAI | ACGGC | 2 cut(s) | 62, 593 |
| BciT130I | CCWGG | 3 cut(s) | 217, 933, 1350 |
| BciVI | GTATCC | 2 cut(s) | 1487, 1732 |
| BclI | TGATCA | 2 cut(s) | 9, 1983 |
| BcnI | CCSGG | 1 cut(s) | 605 |
| BcoDI | GTCTC | 3 cut(s) | 1347, 2258, 2497 |
| BcuI | ACTAGT | 2 cut(s) | 1117, 1325 |
| BfaI | CTAG | 8 cut(s) | 63, 717, 1118, 1326, 1788, 1850, 1971, 2159 |
| BfmI | CTRYAG | 1 cut(s) | 270 |
| BfoI | RGCGCY | 1 cut(s) | 483 |
| BfuAI | ACCTGC | 1 cut(s) | 454 |
| BfuI | GTATCC | 2 cut(s) | 1487, 1732 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 83 |
| BlpI | GCTNAGC | 1 cut(s) | 158 |
| Bme1390I | CCNGG | 4 cut(s) | 217, 605, 933, 1350 |
| Bme18I | GGWCC | 4 cut(s) | 280, 1677, 1792, 2184 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 512 |
| BmeT110I | CYCGRG | 2 cut(s) | 884, 2513 |
| BmgT120I | GGNCC | 9 cut(s) | 280, 317, 606, 624, 1677, 1792, 1880, 2184, 2527 |
| BmiI | GGNNCC | 3 cut(s) | 820, 1793, 2528 |
| BmrFI | CCNGG | 4 cut(s) | 217, 605, 933, 1350 |
| BmsI | GCATC | 4 cut(s) | 174, 559, 970, 1630 |
| BoxI | GACNNNNGTC | 1 cut(s) | 680 |
| BpiI | GAAGAC | 6 cut(s) | 49, 676, 1103, 1501, 1875, 2347 |
| BpmI | CTGGAG | 1 cut(s) | 1371 |
| Bpu10I | CCTNAGC | 4 cut(s) | 735, 2180, 2681, 2796 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 158 |
| Bpu14I | TTCGAA | 1 cut(s) | 1512 |
| BpuEI | CTTGAG | 1 cut(s) | 2710 |
| BpuMI | CCSGG | 1 cut(s) | 605 |
| BsaAI | YACGTR | 1 cut(s) | 526 |
| BsaHI | GRCGYC | 1 cut(s) | 588 |
| BsaI | GGTCTC | 1 cut(s) | 2258 |
| BsaJI | CCNNGG | 8 cut(s) | 78, 355, 822, 987, 999, 1876, 1929, 2313 |
| BsaWI | WCCGGW | 2 cut(s) | 97, 1674 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 102, 132, 1221, 1251, 2776, 2806 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 604, 710, 1262, 1394, 2801, 2830 |
| Bse118I | RCCGGY | 1 cut(s) | 1674 |
| Bse1I | ACTGG | 1 cut(s) | 2031 |
| Bse3DI | GCAATG | 1 cut(s) | 2538 |
| BseBI | CCWGG | 3 cut(s) | 217, 933, 1350 |
| BseDI | CCNNGG | 8 cut(s) | 78, 355, 822, 987, 999, 1876, 1929, 2313 |
| BseGI | GGATG | 5 cut(s) | 199, 435, 552, 753, 760 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 604, 710, 1262, 1394, 2801, 2830 |
| BseMI | GCAATG | 1 cut(s) | 2538 |
| BseMII | CTCAG | 4 cut(s) | 149, 2194, 2695, 2787 |
| BseNI | ACTGG | 1 cut(s) | 2031 |
| BseRI | GAGGAG | 2 cut(s) | 1025, 2558 |
| BseSI | GKGCMC | 1 cut(s) | 1737 |
| BseX3I | CGGCCG | 1 cut(s) | 75 |
| BseYI | CCCAGC | 1 cut(s) | 2543 |
| BsgI | GTGCAG | 1 cut(s) | 212 |
| Bsh1236I | CGCG | 3 cut(s) | 74, 441, 2382 |
| Bsh1285I | CGRYCG | 1 cut(s) | 78 |
| BshTI | ACCGGT | 1 cut(s) | 1674 |
| BsiEI | CGRYCG | 1 cut(s) | 78 |
| BsiHKAI | GWGCWC | 1 cut(s) | 885 |
| BsiHKCI | CYCGRG | 2 cut(s) | 884, 2513 |
| BsiSI | CCGG | 3 cut(s) | 98, 604, 1675 |
| BslFI | GGGAC | 8 cut(s) | 359, 500, 1411, 1805, 2120, 2242, 2706, 2799 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 604, 710, 1262, 1394, 2801, 2830 |
| BsmAI | GTCTC | 3 cut(s) | 1347, 2258, 2497 |
| BsmFI | GGGAC | 8 cut(s) | 359, 500, 1411, 1805, 2120, 2242, 2706, 2799 |
| BsmI | GAATGC | 1 cut(s) | 2255 |
| Bso31I | GGTCTC | 1 cut(s) | 2258 |
| BsoBI | CYCGRG | 2 cut(s) | 884, 2513 |
| Bsp119I | TTCGAA | 1 cut(s) | 1512 |
| Bsp1286I | GDGCHC | 3 cut(s) | 885, 976, 1737 |
| Bsp143I | GATC | 4 cut(s) | 9, 381, 639, 1983 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 158 |
| Bsp19I | CCATGG | 3 cut(s) | 999, 1929, 2313 |
| Bsp68I | TCGCGA | 1 cut(s) | 2382 |
| BspACI | CCGC | 8 cut(s) | 74, 83, 393, 421, 439, 444, 2028, 2249 |
| BspCNI | CTCAG | 4 cut(s) | 150, 2193, 2694, 2788 |
| BspFNI | CGCG | 3 cut(s) | 74, 441, 2382 |
| BspHI | TCATGA | 1 cut(s) | 976 |
| BspLI | GGNNCC | 3 cut(s) | 820, 1793, 2528 |
| BspMAI | CTGCAG | 1 cut(s) | 274 |
| BspMI | ACCTGC | 1 cut(s) | 454 |
| BspT104I | TTCGAA | 1 cut(s) | 1512 |
| BspTNI | GGTCTC | 1 cut(s) | 2258 |
| BsrBI | CCGCTC | 2 cut(s) | 423, 446 |
| BsrDI | GCAATG | 1 cut(s) | 2538 |
| BsrFI | RCCGGY | 1 cut(s) | 1674 |
| BsrI | ACTGG | 1 cut(s) | 2031 |
| BssAI | RCCGGY | 1 cut(s) | 1674 |
| BssECI | CCNNGG | 8 cut(s) | 78, 355, 822, 987, 999, 1876, 1929, 2313 |
| BssMI | GATC | 4 cut(s) | 9, 381, 639, 1983 |
| BssNI | GRCGYC | 1 cut(s) | 588 |
| BssT1I | CCWWGG | 4 cut(s) | 987, 999, 1929, 2313 |
| Bst2UI | CCWGG | 3 cut(s) | 217, 933, 1350 |
| Bst4CI | ACNGT | 5 cut(s) | 1131, 2053, 2074, 2197, 2504 |
| Bst6I | CTCTTC | 4 cut(s) | 902, 1206, 2537, 2696 |
| BstACI | GRCGYC | 1 cut(s) | 588 |
| BstBAI | YACGTR | 1 cut(s) | 526 |
| BstBI | TTCGAA | 1 cut(s) | 1512 |
| BstC8I | GCNNGC | 3 cut(s) | 306, 336, 2380 |
| BstDEI | CTNAG | 6 cut(s) | 158, 735, 2180, 2507, 2681, 2796 |
| BstDSI | CCRYGG | 5 cut(s) | 78, 822, 999, 1929, 2313 |
| BstF5I | GGATG | 5 cut(s) | 199, 435, 552, 753, 760 |
| BstFNI | CGCG | 3 cut(s) | 74, 441, 2382 |
| BstH2I | RGCGCY | 1 cut(s) | 483 |
| BstHHI | GCGC | 3 cut(s) | 443, 482, 2761 |
| BstKTI | GATC | 4 cut(s) | 12, 384, 642, 1986 |
| BstMAI | GTCTC | 3 cut(s) | 1347, 2258, 2497 |
| BstMBI | GATC | 4 cut(s) | 9, 381, 639, 1983 |
| BstMCI | CGRYCG | 1 cut(s) | 78 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 80, 83, 226, 272, 479, 980, 989, 1159, 2549 |
| BstNI | CCWGG | 3 cut(s) | 217, 933, 1350 |
| BstNSI | RCATGY | 3 cut(s) | 175, 700, 799 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 680 |
| BstSCI | CCNGG | 4 cut(s) | 215, 603, 931, 1348 |
| BstSFI | CTRYAG | 1 cut(s) | 270 |
| BstSLI | GKGCMC | 1 cut(s) | 1737 |
| BstSNI | TACGTA | 1 cut(s) | 526 |
| BstUI | CGCG | 3 cut(s) | 74, 441, 2382 |
| BstV2I | GAAGAC | 6 cut(s) | 49, 676, 1103, 1501, 1875, 2347 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 994, 1377 |
| BstZI | CGGCCG | 1 cut(s) | 75 |
| BsuI | GTATCC | 2 cut(s) | 1487, 1732 |
| BtgI | CCRYGG | 5 cut(s) | 78, 822, 999, 1929, 2313 |
| BtgZI | GCGATG | 1 cut(s) | 2397 |
| BtsCI | GGATG | 5 cut(s) | 199, 435, 552, 753, 760 |
| BtsIMutI | CAGTG | 2 cut(s) | 1127, 2751 |
| BtuMI | TCGCGA | 1 cut(s) | 2382 |
| BveI | ACCTGC | 1 cut(s) | 454 |
| Cac8I | GCNNGC | 3 cut(s) | 306, 336, 2380 |
| CaiI | CAGNNNCTG | 2 cut(s) | 269, 1715 |
| CciI | TCATGA | 1 cut(s) | 976 |
| CfoI | GCGC | 3 cut(s) | 443, 482, 2761 |
| Cfr10I | RCCGGY | 1 cut(s) | 1674 |
| Cfr13I | GGNCC | 9 cut(s) | 280, 317, 606, 624, 1677, 1792, 1880, 2184, 2527 |
| Csp6I | GTAC | 4 cut(s) | 430, 611, 714, 873 |
| CspAI | ACCGGT | 1 cut(s) | 1674 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1467, 1471, 1502, 1506 |
| CviQI | GTAC | 4 cut(s) | 430, 611, 714, 873 |
| DdeI | CTNAG | 6 cut(s) | 158, 735, 2180, 2507, 2681, 2796 |
| DpnI | GATC | 4 cut(s) | 11, 383, 641, 1985 |
| DpnII | GATC | 4 cut(s) | 9, 381, 639, 1983 |
| DriI | GACNNNNNGTC | 1 cut(s) | 512 |
| EaeI | YGGCCR | 3 cut(s) | 75, 666, 996 |
| EagI | CGGCCG | 1 cut(s) | 75 |
| Eam1104I | CTCTTC | 4 cut(s) | 902, 1206, 2537, 2696 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 512 |
| EarI | CTCTTC | 4 cut(s) | 902, 1206, 2537, 2696 |
| EciI | GGCGGA | 1 cut(s) | 382 |
| Ecl136II | GAGCTC | 1 cut(s) | 883 |
| EclXI | CGGCCG | 1 cut(s) | 75 |
| Eco105I | TACGTA | 1 cut(s) | 526 |
| Eco130I | CCWWGG | 4 cut(s) | 987, 999, 1929, 2313 |
| Eco24I | GRGCYC | 2 cut(s) | 885, 976 |
| Eco31I | GGTCTC | 1 cut(s) | 2258 |
| Eco47I | GGWCC | 4 cut(s) | 280, 1677, 1792, 2184 |
| Eco52I | CGGCCG | 1 cut(s) | 75 |
| Eco53kI | GAGCTC | 1 cut(s) | 883 |
| Eco57I | CTGAAG | 3 cut(s) | 1187, 2117, 2775 |
| Eco88I | CYCGRG | 2 cut(s) | 884, 2513 |
| EcoICRI | GAGCTC | 1 cut(s) | 883 |
| EcoO109I | RGGNCCY | 4 cut(s) | 1792, 1880, 2184, 2527 |
| EcoRI | GAATTC | 2 cut(s) | 1057, 1282 |
| EcoRII | CCWGG | 3 cut(s) | 215, 931, 1348 |
| EcoT14I | CCWWGG | 4 cut(s) | 987, 999, 1929, 2313 |
| EcoT22I | ATGCAT | 1 cut(s) | 1765 |
| EcoT38I | GRGCYC | 2 cut(s) | 885, 976 |
| ErhI | CCWWGG | 4 cut(s) | 987, 999, 1929, 2313 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1611, 1643 |
| FaqI | GGGAC | 8 cut(s) | 359, 500, 1411, 1805, 2120, 2242, 2706, 2799 |
| FauNDI | CATATG | 1 cut(s) | 1988 |
| FbaI | TGATCA | 2 cut(s) | 9, 1983 |
| FblI | GTMKAC | 1 cut(s) | 528 |
| FokI | GGATG | 5 cut(s) | 186, 422, 539, 760, 767 |
| FriOI | GRGCYC | 2 cut(s) | 885, 976 |
| FspBI | CTAG | 8 cut(s) | 63, 717, 1118, 1326, 1788, 1850, 1971, 2159 |
| GlaI | GCGC | 3 cut(s) | 442, 481, 2760 |
| GsaI | CCCAGC | 1 cut(s) | 2547 |
| GsuI | CTGGAG | 1 cut(s) | 1371 |
| HaeII | RGCGCY | 1 cut(s) | 483 |
| HapII | CCGG | 3 cut(s) | 98, 604, 1675 |
| HhaI | GCGC | 3 cut(s) | 443, 482, 2761 |
| Hin1I | GRCGYC | 1 cut(s) | 588 |
| Hin6I | GCGC | 3 cut(s) | 441, 480, 2759 |
| HinP1I | GCGC | 3 cut(s) | 441, 480, 2759 |
| HindIII | AAGCTT | 4 cut(s) | 492, 1036, 1276, 1906 |
| HpaII | CCGG | 3 cut(s) | 98, 604, 1675 |
| HphI | GGTGA | 6 cut(s) | 112, 1066, 1883, 2361, 2432, 2816 |
| Hpy166II | GTNNAC | 4 cut(s) | 529, 694, 2086, 2708 |
| Hpy8I | GTNNAC | 4 cut(s) | 529, 694, 2086, 2708 |
| Hpy99I | CGWCG | 4 cut(s) | 590, 632, 2003, 2264 |
| HpyAV | CCTTC | 4 cut(s) | 752, 1045, 1228, 1930 |
| HpyCH4III | ACNGT | 5 cut(s) | 1131, 2053, 2074, 2197, 2504 |
| HpyCH4IV | ACGT | 5 cut(s) | 252, 525, 588, 2082, 2327 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 80, 83, 226, 272, 479, 980, 989, 1159, 2549 |
| HpyF3I | CTNAG | 6 cut(s) | 158, 735, 2180, 2507, 2681, 2796 |
| HpySE526I | ACGT | 5 cut(s) | 252, 525, 588, 2082, 2327 |
| Hsp92I | GRCGYC | 1 cut(s) | 588 |
| HspAI | GCGC | 3 cut(s) | 441, 480, 2759 |
| Ksp22I | TGATCA | 2 cut(s) | 9, 1983 |
| Kzo9I | GATC | 4 cut(s) | 9, 381, 639, 1983 |
| LmnI | GCTCC | 4 cut(s) | 428, 649, 2067, 2776 |
| LweI | GCATC | 4 cut(s) | 174, 559, 970, 1630 |
| MaeI | CTAG | 8 cut(s) | 63, 717, 1118, 1326, 1788, 1850, 1971, 2159 |
| MaeII | ACGT | 5 cut(s) | 252, 525, 588, 2082, 2327 |
| MaeIII | GTNAC | 6 cut(s) | 1018, 1453, 1472, 1801, 2021, 2074 |
| MalI | GATC | 4 cut(s) | 11, 383, 641, 1985 |
| MbiI | CCGCTC | 2 cut(s) | 423, 446 |
| MboI | GATC | 4 cut(s) | 9, 381, 639, 1983 |
| MfeI | CAATTG | 1 cut(s) | 2204 |
| MhlI | GDGCHC | 3 cut(s) | 885, 976, 1737 |
| MlsI | TGGCCA | 2 cut(s) | 668, 998 |
| MluNI | TGGCCA | 2 cut(s) | 668, 998 |
| MlyI | GAGTC | 7 cut(s) | 120, 449, 1349, 1594, 2008, 2360, 2821 |
| MmeI | TCCRAC | 4 cut(s) | 1080, 1383, 2089, 2523 |
| Mox20I | TGGCCA | 2 cut(s) | 668, 998 |
| Mph1103I | ATGCAT | 1 cut(s) | 1765 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1623, 2217 |
| MscI | TGGCCA | 2 cut(s) | 668, 998 |
| MseI | TTAA | 8 cut(s) | 1212, 1425, 1863, 2036, 2048, 2402, 2657, 2697 |
| MslI | CAYNNNNRTG | 2 cut(s) | 170, 1730 |
| Msp20I | TGGCCA | 2 cut(s) | 668, 998 |
| MspA1I | CMGCKG | 1 cut(s) | 266 |
| MspI | CCGG | 3 cut(s) | 98, 604, 1675 |
| MspR9I | CCNGG | 4 cut(s) | 217, 605, 933, 1350 |
| MunI | CAATTG | 1 cut(s) | 2204 |
| Mva1269I | GAATGC | 1 cut(s) | 2255 |
| MvaI | CCWGG | 3 cut(s) | 217, 933, 1350 |
| MvnI | CGCG | 3 cut(s) | 74, 441, 2382 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 80, 83, 226, 272, 479, 980, 989, 1159, 2549 |
| NciI | CCSGG | 1 cut(s) | 605 |
| NcoI | CCATGG | 3 cut(s) | 999, 1929, 2313 |
| NdeI | CATATG | 1 cut(s) | 1988 |
| NdeII | GATC | 4 cut(s) | 9, 381, 639, 1983 |
| NlaIV | GGNNCC | 3 cut(s) | 820, 1793, 2528 |
| NmuCI | GTSAC | 2 cut(s) | 1018, 1453 |
| NruI | TCGCGA | 1 cut(s) | 2382 |
| NsiI | ATGCAT | 1 cut(s) | 1765 |
| NspI | RCATGY | 3 cut(s) | 175, 700, 799 |
| NspV | TTCGAA | 1 cut(s) | 1512 |
| PaeR7I | CTCGAG | 2 cut(s) | 884, 2513 |
| PagI | TCATGA | 1 cut(s) | 976 |
| PciI | ACATGT | 2 cut(s) | 171, 795 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 531, 540 |
| PctI | GAATGC | 1 cut(s) | 2255 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1623, 2217 |
| PfeI | GAWTC | 7 cut(s) | 323, 594, 1384, 1463, 1712, 2618, 2624 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1262 |
| PinAI | ACCGGT | 1 cut(s) | 1674 |
| PleI | GAGTC | 7 cut(s) | 119, 449, 1349, 1593, 2008, 2360, 2820 |
| PpsI | GAGTC | 7 cut(s) | 119, 449, 1349, 1593, 2008, 2360, 2820 |
| Ppu21I | YACGTR | 1 cut(s) | 526 |
| PpuMI | RGGWCCY | 2 cut(s) | 1792, 2184 |
| PscI | ACATGT | 2 cut(s) | 171, 795 |
| PshAI | GACNNNNGTC | 1 cut(s) | 680 |
| PsiI | TTATAA | 2 cut(s) | 350, 1551 |
| Psp124BI | GAGCTC | 1 cut(s) | 885 |
| Psp1406I | AACGTT | 1 cut(s) | 2327 |
| Psp5II | RGGWCCY | 2 cut(s) | 1792, 2184 |
| Psp6I | CCWGG | 3 cut(s) | 215, 931, 1348 |
| PspFI | CCCAGC | 1 cut(s) | 2543 |
| PspGI | CCWGG | 3 cut(s) | 215, 931, 1348 |
| PspN4I | GGNNCC | 3 cut(s) | 820, 1793, 2528 |
| PspPI | GGNCC | 9 cut(s) | 280, 317, 606, 624, 1677, 1792, 1880, 2184, 2527 |
| PspPPI | RGGWCCY | 2 cut(s) | 1792, 2184 |
| PspXI | VCTCGAGB | 1 cut(s) | 884 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1292, 1324 |
| PstI | CTGCAG | 1 cut(s) | 274 |
| PstNI | CAGNNNCTG | 2 cut(s) | 269, 1715 |
| PvuII | CAGCTG | 1 cut(s) | 266 |
| RruI | TCGCGA | 1 cut(s) | 2382 |
| RsaI | GTAC | 4 cut(s) | 431, 612, 715, 874 |
| RsaNI | GTAC | 4 cut(s) | 430, 611, 714, 873 |
| RseI | CAYNNNNRTG | 2 cut(s) | 170, 1730 |
| SacI | GAGCTC | 1 cut(s) | 885 |
| SaqAI | TTAA | 8 cut(s) | 1212, 1425, 1863, 2036, 2048, 2402, 2657, 2697 |
| Sau3AI | GATC | 4 cut(s) | 9, 381, 639, 1983 |
| Sau96I | GGNCC | 9 cut(s) | 280, 317, 606, 624, 1677, 1792, 1880, 2184, 2527 |
| SchI | GAGTC | 7 cut(s) | 120, 449, 1349, 1594, 2008, 2360, 2821 |
| ScrFI | CCNGG | 4 cut(s) | 217, 605, 933, 1350 |
| SduI | GDGCHC | 3 cut(s) | 885, 976, 1737 |
| SfaNI | GCATC | 4 cut(s) | 174, 559, 970, 1630 |
| SfcI | CTRYAG | 1 cut(s) | 270 |
| Sfr274I | CTCGAG | 2 cut(s) | 884, 2513 |
| SfuI | TTCGAA | 1 cut(s) | 1512 |
| SinI | GGWCC | 4 cut(s) | 280, 1677, 1792, 2184 |
| SlaI | CTCGAG | 2 cut(s) | 884, 2513 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 170, 1730 |
| SmlI | CTYRAG | 3 cut(s) | 884, 2513, 2725 |
| SmoI | CTYRAG | 3 cut(s) | 884, 2513, 2725 |
| SnaBI | TACGTA | 1 cut(s) | 526 |
| SpeI | ACTAGT | 2 cut(s) | 1117, 1325 |
| SsiI | CCGC | 8 cut(s) | 74, 83, 393, 421, 439, 444, 2028, 2249 |
| SspI | AATATT | 1 cut(s) | 19 |
| SspMI | CTAG | 8 cut(s) | 63, 717, 1118, 1326, 1788, 1850, 1971, 2159 |
| SstI | GAGCTC | 1 cut(s) | 885 |
| StyD4I | CCNGG | 4 cut(s) | 215, 603, 931, 1348 |
| StyI | CCWWGG | 4 cut(s) | 987, 999, 1929, 2313 |
| TaaI | ACNGT | 5 cut(s) | 1131, 2053, 2074, 2197, 2504 |
| TaiI | ACGT | 5 cut(s) | 255, 528, 591, 2085, 2330 |
| TaqII | GACCGA | 1 cut(s) | 794 |
| TatI | WGTACW | 1 cut(s) | 872 |
| TauI | GCSGC | 4 cut(s) | 77, 86, 446, 2252 |
| TfiI | GAWTC | 7 cut(s) | 323, 594, 1384, 1463, 1712, 2618, 2624 |
| Tru1I | TTAA | 8 cut(s) | 1212, 1425, 1863, 2036, 2048, 2402, 2657, 2697 |
| Tru9I | TTAA | 8 cut(s) | 1212, 1425, 1863, 2036, 2048, 2402, 2657, 2697 |
| TscAI | CASTG | 2 cut(s) | 1134, 2758 |
| TseFI | GTSAC | 2 cut(s) | 1018, 1453 |
| Tsp45I | GTSAC | 2 cut(s) | 1018, 1453 |
| TspGWI | ACGGA | 2 cut(s) | 662, 811 |
| TspRI | CASTG | 2 cut(s) | 1134, 2758 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1262 |
| VpaK11BI | GGWCC | 4 cut(s) | 280, 1677, 1792, 2184 |
| XapI | RAATTY | 3 cut(s) | 1057, 1282, 2661 |
| XbaI | TCTAGA | 1 cut(s) | 1849 |
| XceI | RCATGY | 3 cut(s) | 175, 700, 799 |
| XhoI | CTCGAG | 2 cut(s) | 884, 2513 |
| XmiI | GTMKAC | 1 cut(s) | 528 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1623, 2217 |
| XspI | CTAG | 8 cut(s) | 63, 717, 1118, 1326, 1788, 1850, 1971, 2159 |
| ZraI | GACGTC | 1 cut(s) | 589 |
| Zsp2I | ATGCAT | 1 cut(s) | 1765 |