RLG00000013835

Glutamate receptor

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Reverse (-)
42525810 .. 42533601
7792 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000013835

Sequence Viewer

Length: 2301 bp
ATGAAGAACCATACAAATATCAACACCATCCTTGTTCCTTTTATATTTTTCTTTGTTCTGTTTTCATGGATTTTCACGGCCGTGAATGCACAGAACACAACTATTCGAGTGAATGTGGGGGTTATTCTTGACTTTGATTCAGGGAGCAAAAAAACTGATAAGTTTTATTGGAGTTGCATGAATCTGGCCCTCTCAGACTTCTATGCATCCAATCGTCACTACAAGACTAGGCTAGTTTTGCTCCCAGGAAACTCCAAAGGAAATGTTGTTGGTGCAGCTGCTGCAGCTGTAGATTTGATAAACAATGAAGAAGTCCAAGCAATCATAGGGCCTGTAACATCAATGCAGGCGAACTTCGTTGTTAATGTGGGACACCAAGCTCAAGTGCCCATTTTAACTTTTTCTGCATCGAGTCCTTCTCTTACTTCACTTGGGAGCTCTTTCTTTTTCCGACTTACACAAAACGACTCAATACAAGTGAAAGCCATAAGTGATATTGTTCAGAACTTTGGATGGAGACAAGTTGTTCCCATCTTCGAAGACACTTCTTATGGGGAGGGAATCATACCGTTTCTAATCGATGCCTTGCAAGCAGTTGAAGCTCATGTTCCCTACAGAAGTGTAGTAGCCACTGATGAACAAATTGAAATTGAGCTTAACAGGTTAAAAGGGATGCCAACTAGAGTCTTCATTGTGCACATGAATCCTCATCTGTGCTCCAGGCTATTTGCCAGGGCAAAAGAGATTGGAATGATGAGTGATGGTTATGTTTGGATCATTGCTAGTGGGATATCTAATAGTTTAAGTTTGATGAGACATTCACATCTAAATTCCATGGAAGGTGTATTAGGTATACAAACATACATTCGAAGAACACTAAAGCTTAGAGAATTTGAAAAGCGGTGGAAAATGAAATTCCAACAAGAGAATCCAAACGTAACTAAGGTTAAGTTGGATGTTTACGGATTTCAAGCTCATGATGCTGTCTTTGCACTAGCTATTGCAGTCGAACAAGTTGGATATACAAGCATTGAATATCAAAAGCCAAGTGATTCCTTCAAGGCAACAGATCTTGATACCCTTAAGGTATCTCATTATGGTCAAAAGCTTGTTGGAGCCCTGTCTGGTATTAGATTTGAAGGCTTAGCTGGAGATTTCAATGTCGTAGAAGGGGAGCTTCAGTCATCAACTTTTAACATAATTAATGTAATTGGTGGTAAAGTAAAGGAAATTGCGATATGGACTCCAGAAAAAGGAATAGTTCCAACAAACACAAGCAAAATCTTTACTAATTCCAAGTGCATTTTTGGACCCATTAAGTGGCCAGGTGATCCTATCTGTGTTCCTAAAGGATGGGAGATCCCAACTAAAGGAAATAAGTTGAAAATAGGTGTTCCTGTCAAGAAAGGTTTTGAAGAGTTTGTTCAGATCAGGAAAGATCCTAACACTAGCACAACGACTGTCACCGGGTTCTGTATTGGTGTCTTCCTTGCAGCAGTGAAATTATTACCATATGATCTTCCTCATGTGTTCATTCCCTATGAAAATTCCAATGGCTCGATGGCTGGGACTTACGATGAATTGGTCCATGAAGTATTTCTCAAGAGAGTGGTCAGCAACTTGGCTAGATTTGTGATGATTATATGGGTATTTGTTATGCTCATAGTGACACAAAGTTACACAGCTAGTCTATCATCACTATTAACAGTCCAACAACTCATGCCGACTGTTACTGACTTAAGTGATCTTTTAAGGAATGGCGATGATGTCGGCTACATCGAGAATGCCTTTGTTCGTGAGGTCTTGTATGAAATAGGTTTTAATAATACCAGGCTCAGGGTTATTAAATCCGCGGAAGATGGTGATAAAGAGCTCACAAAAGGTACTGCAAAGGGTGGTATTGCTGCTTTTGTTGGTGGAACGCCATACTTGAAGGTTTTTGTTGCAAAGTACCGCTCCAAATACACTATGATTGGACCCATCTCCAAAACTAATGGGTTTGCTTTCGTGTTCCCTAAACGTTCACCACTTGTAGCTGATATGTCAAGCGCAATCCTAAATTTGACCGAAGGAAAGGAGATTCTGAATCTTGAAGCCACTTGGCTAGGGAACGAAAGCATTTGTCAAGGCTCAAGTTCTGCCAATATATCTGGCAACAGTCTTGGCCTTGAGAGCTTTTGGGGACTATTCCTCATTGCTGGAATCGCTTCTCCTCCTGGAGCTCCTTTTGCTCGGCTTCAACCTTTGCCAACCTCGGTTTCTTCAGGGCCTTGTACTTGCCATAACGGCTCTTCCACTTGA

Protein Analysis

767

Amino Acids

84.25

Weight (kDa)

8.63

Isoelectric Point (pI)

33.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peripla_BP_6 PF13458 37 - 340 2.4e-17 Periplasmic binding protein
ANF_receptor PF01094 59 - 405 4.6e-72 Receptor family ligand binding region
Lig_chan PF00060 535 - 736 2.4e-20 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1320
AccBSI CCGCTC 1 cut(s) 1956
AccI GTMKAC 1 cut(s) 853
AccII CGCG 1 cut(s) 1853
AciI CCGC 4 cut(s) 901, 1851, 1853, 1954
AclI AACGTT 1 cut(s) 2020
AclWI GGATC 4 cut(s) 782, 1325, 1354, 1433
AcoI YGGCCR 2 cut(s) 78, 1322
AcsI RAATTY 5 cut(s) 829, 890, 914, 1546, 2059
AcuI CTGAAG 2 cut(s) 1163, 2247
AfaI GTAC 3 cut(s) 1885, 1952, 2275
AfiI CCNNNNNNNGG 4 cut(s) 1253, 1320, 1370, 1836
AflII CTTAAG 2 cut(s) 1082, 1738
AjnI CCWGG 6 cut(s) 244, 719, 731, 1324, 1829, 2215
AjuI GAANNNNNNNTTGG 2 cut(s) 2242, 2274
AleI CACNNNNGTG 1 cut(s) 80
Alw21I GWGCWC 5 cut(s) 440, 699, 719, 1875, 2224
Alw26I GTCTC 2 cut(s) 511, 808
Alw44I GTGCAC 1 cut(s) 695
AlwI GGATC 4 cut(s) 782, 1325, 1354, 1433
AlwNI CAGNNNCTG 1 cut(s) 281
AoxI GGCC 6 cut(s) 78, 186, 329, 1322, 2164, 2267
ApaLI GTGCAC 1 cut(s) 695
ApeKI GCWGC 6 cut(s) 275, 278, 281, 284, 1493, 1904
ApoI RAATTY 5 cut(s) 829, 890, 914, 1546, 2059
AseI ATTAAT 1 cut(s) 1203
Asp700I GAANNNNTTC 2 cut(s) 1596, 2206
AspLEI GCGC 1 cut(s) 2051
AspS9I GGNCC 6 cut(s) 187, 329, 1310, 1585, 1976, 2267
AsuC2I CCSGG 1 cut(s) 1468
AsuHPI GGTGA 4 cut(s) 1340, 1456, 1874, 2016
AsuII TTCGAA 2 cut(s) 537, 868
AvaII GGWCC 3 cut(s) 1310, 1585, 1976
BaeGI GKGCMC 2 cut(s) 390, 699
BalI TGGCCA 1 cut(s) 1324
BanII GRGCYC 4 cut(s) 440, 1120, 1875, 2224
BbsI GAAGAC 3 cut(s) 546, 679, 1477
Bbv12I GWGCWC 5 cut(s) 440, 699, 719, 1875, 2224
BbvI GCAGC 6 cut(s) 265, 268, 287, 296, 1505, 1891
BccI CCATC 8 cut(s) 35, 507, 539, 755, 1347, 1555, 1853, 1988
BceAI ACGGC 2 cut(s) 65, 93
BciT130I CCWGG 6 cut(s) 246, 721, 733, 1326, 1831, 2217
BcnI CCSGG 1 cut(s) 1468
BcoDI GTCTC 2 cut(s) 511, 808
BfaI CTAG 9 cut(s) 228, 233, 681, 783, 995, 1449, 1626, 1686, 2105
BfmI CTRYAG 3 cut(s) 282, 288, 613
BfrI CTTAAG 2 cut(s) 1082, 1738
BglI GCCNNNNNGGC 1 cut(s) 2286
BglII AGATCT 1 cut(s) 1069
BisI GCNGC 6 cut(s) 276, 279, 282, 285, 1494, 1905
BlpI GCTNAGC 1 cut(s) 1144
BlsI GCNGC 6 cut(s) 277, 280, 283, 286, 1495, 1906
Bme1390I CCNGG 7 cut(s) 246, 721, 733, 1326, 1468, 1831, 2217
Bme18I GGWCC 3 cut(s) 1310, 1585, 1976
BmgT120I GGNCC 6 cut(s) 187, 329, 1310, 1585, 1976, 2267
BmiI GGNNCC 3 cut(s) 1117, 1312, 1978
BmrFI CCNGG 7 cut(s) 246, 721, 733, 1326, 1468, 1831, 2217
BmsI GCATC 5 cut(s) 215, 416, 571, 663, 970
BpiI GAAGAC 3 cut(s) 546, 679, 1477
BplI GAGNNNNNCTC 2 cut(s) 403, 435
BpmI CTGGAG 4 cut(s) 703, 1170, 1230, 2238
Bpu10I CCTNAGC 1 cut(s) 1835
Bpu1102I GCTNAGC 1 cut(s) 1144
Bpu14I TTCGAA 2 cut(s) 537, 868
BpuEI CTTGAG 4 cut(s) 366, 1586, 2116, 2189
BpuMI CCSGG 1 cut(s) 1468
Bsa29I ATCGAT 1 cut(s) 579
BsaJI CCNNGG 5 cut(s) 244, 732, 834, 1851, 2253
BsaXI ACNNNNNCTCC 2 cut(s) 1166, 1196
Bsc4I CCNNNNNNNGG 4 cut(s) 1253, 1320, 1370, 1836
Bse3DI GCAATG 2 cut(s) 777, 2193
BseBI CCWGG 6 cut(s) 246, 721, 733, 1326, 1831, 2217
BseCI ATCGAT 1 cut(s) 579
BseDI CCNNGG 5 cut(s) 244, 732, 834, 1851, 2253
BseGI GGATG 6 cut(s) 27, 206, 518, 678, 961, 1358
BseLI CCNNNNNNNGG 4 cut(s) 1253, 1320, 1370, 1836
BseMI GCAATG 2 cut(s) 777, 2193
BseMII CTCAG 2 cut(s) 207, 1849
BseRI GAGGAG 1 cut(s) 2202
BseSI GKGCMC 2 cut(s) 390, 699
BseX3I CGGCCG 1 cut(s) 78
BseXI GCAGC 6 cut(s) 265, 268, 287, 296, 1505, 1891
BseYI CCCAGC 1 cut(s) 1565
BsgI GTGCAG 1 cut(s) 294
Bsh1236I CGCG 1 cut(s) 1853
Bsh1285I CGRYCG 1 cut(s) 81
BshFI GGCC 6 cut(s) 80, 188, 331, 1324, 2166, 2269
BshVI ATCGAT 1 cut(s) 579
BsiEI CGRYCG 1 cut(s) 81
BsiHKAI GWGCWC 5 cut(s) 440, 699, 719, 1875, 2224
BsiSI CCGG 1 cut(s) 1467
BslFI GGGAC 3 cut(s) 384, 1582, 2196
BslI CCNNNNNNNGG 4 cut(s) 1253, 1320, 1370, 1836
BsmAI GTCTC 2 cut(s) 511, 808
BsmFI GGGAC 3 cut(s) 384, 1582, 2196
BsmI GAATGC 2 cut(s) 91, 1789
BsnI GGCC 6 cut(s) 80, 188, 331, 1324, 2166, 2269
Bsp119I TTCGAA 2 cut(s) 537, 868
Bsp1286I GDGCHC 7 cut(s) 390, 440, 699, 719, 1120, 1875, 2224
Bsp143I GATC 8 cut(s) 774, 1069, 1330, 1359, 1428, 1438, 1516, 1744
Bsp1720I GCTNAGC 1 cut(s) 1144
Bsp19I CCATGG 1 cut(s) 834
BspACI CCGC 4 cut(s) 901, 1851, 1853, 1954
BspANI GGCC 6 cut(s) 80, 188, 331, 1324, 2166, 2269
BspCNI CTCAG 2 cut(s) 206, 1848
BspDI ATCGAT 1 cut(s) 579
BspFNI CGCG 1 cut(s) 1853
BspHI TCATGA 1 cut(s) 976
BspLI GGNNCC 3 cut(s) 1117, 1312, 1978
BspMAI CTGCAG 1 cut(s) 286
BspPI GGATC 4 cut(s) 782, 1325, 1354, 1433
BspQI GCTCTTC 1 cut(s) 2296
BspT104I TTCGAA 2 cut(s) 537, 868
BspTI CTTAAG 2 cut(s) 1082, 1738
BsrBI CCGCTC 1 cut(s) 1956
BsrDI GCAATG 2 cut(s) 777, 2193
BssECI CCNNGG 5 cut(s) 244, 732, 834, 1851, 2253
BssMI GATC 8 cut(s) 774, 1069, 1330, 1359, 1428, 1438, 1516, 1744
BssNAI GTATAC 1 cut(s) 854
BssT1I CCWWGG 1 cut(s) 834
Bst1107I GTATAC 1 cut(s) 854
Bst2UI CCWGG 6 cut(s) 246, 721, 733, 1326, 1831, 2217
Bst4CI ACNGT 5 cut(s) 570, 1462, 1708, 1729, 2159
Bst6I CTCTTC 2 cut(s) 1410, 2296
BstAFI CTTAAG 2 cut(s) 1082, 1738
BstAPI GCANNNNNTGC 1 cut(s) 281
BstBI TTCGAA 2 cut(s) 537, 868
BstC8I GCNNGC 2 cut(s) 348, 591
BstDEI CTNAG 5 cut(s) 193, 884, 942, 1144, 1835
BstDSI CCRYGG 2 cut(s) 834, 1851
BstF5I GGATG 6 cut(s) 27, 206, 518, 678, 961, 1358
BstFNI CGCG 1 cut(s) 1853
BstHHI GCGC 1 cut(s) 2051
BstKTI GATC 8 cut(s) 777, 1072, 1333, 1362, 1431, 1441, 1519, 1747
BstMAI GTCTC 2 cut(s) 511, 808
BstMBI GATC 8 cut(s) 774, 1069, 1330, 1359, 1428, 1438, 1516, 1744
BstMCI CGRYCG 1 cut(s) 81
BstNI CCWGG 6 cut(s) 246, 721, 733, 1326, 1831, 2217
BstSCI CCNGG 7 cut(s) 244, 719, 731, 1324, 1466, 1829, 2215
BstSFI CTRYAG 3 cut(s) 282, 288, 613
BstSLI GKGCMC 2 cut(s) 390, 699
BstUI CGCG 1 cut(s) 1853
BstV1I GCAGC 6 cut(s) 265, 268, 287, 296, 1505, 1891
BstV2I GAAGAC 3 cut(s) 546, 679, 1477
BstX2I RGATCY 3 cut(s) 1069, 1359, 1438
BstYI RGATCY 3 cut(s) 1069, 1359, 1438
BstZ17I GTATAC 1 cut(s) 854
BstZI CGGCCG 1 cut(s) 78
Bsu15I ATCGAT 1 cut(s) 579
BsuRI GGCC 6 cut(s) 80, 188, 331, 1324, 2166, 2269
BsuTUI ATCGAT 1 cut(s) 579
BtgI CCRYGG 2 cut(s) 834, 1851
BtgZI GCGATG 1 cut(s) 1776
BtsCI GGATG 6 cut(s) 27, 206, 518, 678, 961, 1358
BtsI GCAGTG 1 cut(s) 1503
BtsIMutI CAGTG 2 cut(s) 630, 1503
Cac8I GCNNGC 2 cut(s) 348, 591
CaiI CAGNNNCTG 1 cut(s) 281
CciI TCATGA 1 cut(s) 976
CfoI GCGC 1 cut(s) 2051
Cfr13I GGNCC 6 cut(s) 187, 329, 1310, 1585, 1976, 2267
Cfr42I CCGCGG 1 cut(s) 1854
ClaI ATCGAT 1 cut(s) 579
Csp6I GTAC 3 cut(s) 1884, 1951, 2274
CviAII CATG 9 cut(s) 66, 178, 605, 700, 835, 977, 1526, 1589, 1720
CviQI GTAC 3 cut(s) 1884, 1951, 2274
DdeI CTNAG 5 cut(s) 193, 884, 942, 1144, 1835
DpnI GATC 8 cut(s) 776, 1071, 1332, 1361, 1430, 1440, 1518, 1746
DpnII GATC 8 cut(s) 774, 1069, 1330, 1359, 1428, 1438, 1516, 1744
EaeI YGGCCR 2 cut(s) 78, 1322
EagI CGGCCG 1 cut(s) 78
Eam1104I CTCTTC 2 cut(s) 1410, 2296
EarI CTCTTC 2 cut(s) 1410, 2296
Ecl136II GAGCTC 3 cut(s) 438, 1873, 2222
EclXI CGGCCG 1 cut(s) 78
Eco130I CCWWGG 1 cut(s) 834
Eco24I GRGCYC 4 cut(s) 440, 1120, 1875, 2224
Eco32I GATATC 1 cut(s) 792
Eco47I GGWCC 3 cut(s) 1310, 1585, 1976
Eco52I CGGCCG 1 cut(s) 78
Eco53kI GAGCTC 3 cut(s) 438, 1873, 2222
Eco57I CTGAAG 2 cut(s) 1163, 2247
EcoICRI GAGCTC 3 cut(s) 438, 1873, 2222
EcoO109I RGGNCCY 2 cut(s) 329, 2267
EcoRII CCWGG 6 cut(s) 244, 719, 731, 1324, 1829, 2215
EcoRV GATATC 1 cut(s) 792
EcoT14I CCWWGG 1 cut(s) 834
EcoT22I ATGCAT 1 cut(s) 208
EcoT38I GRGCYC 4 cut(s) 440, 1120, 1875, 2224
ErhI CCWWGG 1 cut(s) 834
FaeI CATG 9 cut(s) 69, 181, 608, 703, 838, 980, 1529, 1592, 1723
FalI AAGNNNNNCTT 2 cut(s) 1161, 1193
FaqI GGGAC 3 cut(s) 384, 1582, 2196
FatI CATG 9 cut(s) 65, 177, 604, 699, 834, 976, 1525, 1588, 1719
FauNDI CATATG 1 cut(s) 1513
FblI GTMKAC 1 cut(s) 853
Fnu4HI GCNGC 6 cut(s) 276, 279, 282, 285, 1494, 1905
FokI GGATG 6 cut(s) 14, 193, 525, 685, 968, 1365
FriOI GRGCYC 4 cut(s) 440, 1120, 1875, 2224
Fsp4HI GCNGC 6 cut(s) 276, 279, 282, 285, 1494, 1905
FspBI CTAG 9 cut(s) 228, 233, 681, 783, 995, 1449, 1626, 1686, 2105
GlaI GCGC 1 cut(s) 2050
GluI GCNGC 6 cut(s) 276, 279, 282, 285, 1494, 1905
GsaI CCCAGC 1 cut(s) 1569
GsuI CTGGAG 4 cut(s) 703, 1170, 1230, 2238
HaeIII GGCC 6 cut(s) 80, 188, 331, 1324, 2166, 2269
HapII CCGG 1 cut(s) 1467
HhaI GCGC 1 cut(s) 2051
Hin1II CATG 9 cut(s) 69, 181, 608, 703, 838, 980, 1529, 1592, 1723
Hin6I GCGC 1 cut(s) 2049
HinP1I GCGC 1 cut(s) 2049
HindIII AAGCTT 2 cut(s) 881, 1106
HpaII CCGG 1 cut(s) 1467
HphI GGTGA 4 cut(s) 1340, 1456, 1874, 2016
Hpy166II GTNNAC 4 cut(s) 697, 854, 961, 2024
Hpy188I TCNGA 5 cut(s) 196, 452, 504, 1428, 2085
Hpy8I GTNNAC 4 cut(s) 697, 854, 961, 2024
HpyAV CCTTC 7 cut(s) 426, 833, 1066, 1133, 1163, 1927, 2063
HpyCH4III ACNGT 5 cut(s) 570, 1462, 1708, 1729, 2159
HpyCH4IV ACGT 2 cut(s) 936, 2020
HpyF3I CTNAG 5 cut(s) 193, 884, 942, 1144, 1835
HpySE526I ACGT 2 cut(s) 936, 2020
Hsp92II CATG 9 cut(s) 69, 181, 608, 703, 838, 980, 1529, 1592, 1723
HspAI GCGC 1 cut(s) 2049
KspI CCGCGG 1 cut(s) 1854
Kzo9I GATC 8 cut(s) 774, 1069, 1330, 1359, 1428, 1438, 1516, 1744
LguI GCTCTTC 1 cut(s) 2296
LmnI GCTCC 9 cut(s) 144, 246, 435, 722, 1115, 1174, 1961, 2219, 2227
Lsp1109I GCAGC 6 cut(s) 265, 268, 287, 296, 1505, 1891
LweI GCATC 5 cut(s) 215, 416, 571, 663, 970
MaeI CTAG 9 cut(s) 228, 233, 681, 783, 995, 1449, 1626, 1686, 2105
MaeII ACGT 2 cut(s) 936, 2020
MaeIII GTNAC 7 cut(s) 215, 334, 937, 1462, 1666, 1676, 1729
MalI GATC 8 cut(s) 776, 1071, 1332, 1361, 1430, 1440, 1518, 1746
MbiI CCGCTC 1 cut(s) 1956
MboI GATC 8 cut(s) 774, 1069, 1330, 1359, 1428, 1438, 1516, 1744
MflI RGATCY 3 cut(s) 1069, 1359, 1438
MhlI GDGCHC 7 cut(s) 390, 440, 699, 719, 1120, 1875, 2224
MlsI TGGCCA 1 cut(s) 1324
MluNI TGGCCA 1 cut(s) 1324
MlyI GAGTC 4 cut(s) 421, 461, 693, 1237
MmeI TCCRAC 7 cut(s) 475, 933, 943, 997, 1093, 1289, 1735
MnlI CCTC 8 cut(s) 200, 550, 717, 1533, 1792, 2201, 2223, 2263
Mox20I TGGCCA 1 cut(s) 1324
Mph1103I ATGCAT 1 cut(s) 208
MroXI GAANNNNTTC 2 cut(s) 1596, 2206
MscI TGGCCA 1 cut(s) 1324
MslI CAYNNNNRTG 1 cut(s) 80
Msp20I TGGCCA 1 cut(s) 1324
MspA1I CMGCKG 3 cut(s) 278, 287, 1853
MspCI CTTAAG 2 cut(s) 1082, 1738
MspI CCGG 1 cut(s) 1467
MspR9I CCNGG 7 cut(s) 246, 721, 733, 1326, 1468, 1831, 2217
Mva1269I GAATGC 2 cut(s) 91, 1789
MvaI CCWGG 6 cut(s) 246, 721, 733, 1326, 1831, 2217
MvnI CGCG 1 cut(s) 1853
NciI CCSGG 1 cut(s) 1468
NcoI CCATGG 1 cut(s) 834
NdeI CATATG 1 cut(s) 1513
NdeII GATC 8 cut(s) 774, 1069, 1330, 1359, 1428, 1438, 1516, 1744
NlaIII CATG 9 cut(s) 69, 181, 608, 703, 838, 980, 1529, 1592, 1723
NlaIV GGNNCC 3 cut(s) 1117, 1312, 1978
NmeAIII GCCGAG 1 cut(s) 2212
NmuCI GTSAC 3 cut(s) 215, 1462, 1666
NsiI ATGCAT 1 cut(s) 208
NspV TTCGAA 2 cut(s) 537, 868
OliI CACNNNNGTG 1 cut(s) 80
PagI TCATGA 1 cut(s) 976
PciSI GCTCTTC 1 cut(s) 2296
PcsI WCGNNNNNNNCGW 1 cut(s) 1776
PctI GAATGC 2 cut(s) 91, 1789
PdmI GAANNNNTTC 2 cut(s) 1596, 2206
PfeI GAWTC 9 cut(s) 137, 181, 561, 703, 928, 1052, 2080, 2086, 2202
PflMI CCANNNNNTGG 1 cut(s) 1320
PfoI TCCNGGA 1 cut(s) 2215
PkrI GCNGC 6 cut(s) 277, 280, 283, 286, 1495, 1906
PleI GAGTC 4 cut(s) 420, 461, 692, 1237
PpsI GAGTC 4 cut(s) 420, 461, 692, 1237
PshBI ATTAAT 1 cut(s) 1203
Psp124BI GAGCTC 3 cut(s) 440, 1875, 2224
Psp1406I AACGTT 1 cut(s) 2020
Psp6I CCWGG 6 cut(s) 244, 719, 731, 1324, 1829, 2215
PspFI CCCAGC 1 cut(s) 1565
PspGI CCWGG 6 cut(s) 244, 719, 731, 1324, 1829, 2215
PspN4I GGNNCC 3 cut(s) 1117, 1312, 1978
PspPI GGNCC 6 cut(s) 187, 329, 1310, 1585, 1976, 2267
PstI CTGCAG 1 cut(s) 286
PstNI CAGNNNCTG 1 cut(s) 281
PsuI RGATCY 3 cut(s) 1069, 1359, 1438
PvuII CAGCTG 2 cut(s) 278, 287
RsaI GTAC 3 cut(s) 1885, 1952, 2275
RsaNI GTAC 3 cut(s) 1884, 1951, 2274
RseI CAYNNNNRTG 1 cut(s) 80
SacI GAGCTC 3 cut(s) 440, 1875, 2224
SacII CCGCGG 1 cut(s) 1854
SapI GCTCTTC 1 cut(s) 2296
SatI GCNGC 6 cut(s) 276, 279, 282, 285, 1494, 1905
Sau3AI GATC 8 cut(s) 774, 1069, 1330, 1359, 1428, 1438, 1516, 1744
Sau96I GGNCC 6 cut(s) 187, 329, 1310, 1585, 1976, 2267
SchI GAGTC 4 cut(s) 421, 461, 693, 1237
ScrFI CCNGG 7 cut(s) 246, 721, 733, 1326, 1468, 1831, 2217
SduI GDGCHC 7 cut(s) 390, 440, 699, 719, 1120, 1875, 2224
SfaNI GCATC 5 cut(s) 215, 416, 571, 663, 970
SfcI CTRYAG 3 cut(s) 282, 288, 613
Sfr303I CCGCGG 1 cut(s) 1854
SfuI TTCGAA 2 cut(s) 537, 868
SgrBI CCGCGG 1 cut(s) 1854
SinI GGWCC 3 cut(s) 1310, 1585, 1976
SmiMI CAYNNNNRTG 1 cut(s) 80
SmlI CTYRAG 6 cut(s) 381, 1082, 1601, 1738, 2131, 2168
SmoI CTYRAG 6 cut(s) 381, 1082, 1601, 1738, 2131, 2168
SsiI CCGC 4 cut(s) 901, 1851, 1853, 1954
SspMI CTAG 9 cut(s) 228, 233, 681, 783, 995, 1449, 1626, 1686, 2105
SstI GAGCTC 3 cut(s) 440, 1875, 2224
StyD4I CCNGG 7 cut(s) 244, 719, 731, 1324, 1466, 1829, 2215
StyI CCWWGG 1 cut(s) 834
TaaI ACNGT 5 cut(s) 570, 1462, 1708, 1729, 2159
TaiI ACGT 2 cut(s) 939, 2023
TaqI TCGA 8 cut(s) 106, 410, 537, 579, 868, 1008, 1559, 1779
TaqII GACCGA 1 cut(s) 2081
TatI WGTACW 1 cut(s) 2273
TfiI GAWTC 9 cut(s) 137, 181, 561, 703, 928, 1052, 2080, 2086, 2202
TscAI CASTG 2 cut(s) 637, 1503
TseFI GTSAC 3 cut(s) 215, 1462, 1666
TseI GCWGC 6 cut(s) 275, 278, 281, 284, 1493, 1904
Tsp45I GTSAC 3 cut(s) 215, 1462, 1666
TspGWI ACGGA 1 cut(s) 978
TspRI CASTG 2 cut(s) 637, 1503
Van91I CCANNNNNTGG 1 cut(s) 1320
Vha464I CTTAAG 2 cut(s) 1082, 1738
VneI GTGCAC 1 cut(s) 695
VpaK11BI GGWCC 3 cut(s) 1310, 1585, 1976
VspI ATTAAT 1 cut(s) 1203
XapI RAATTY 5 cut(s) 829, 890, 914, 1546, 2059
XcmI CCANNNNNNNNNTGG 1 cut(s) 1558
XmiI GTMKAC 1 cut(s) 853
XmnI GAANNNNTTC 2 cut(s) 1596, 2206
XspI CTAG 9 cut(s) 228, 233, 681, 783, 995, 1449, 1626, 1686, 2105
Zsp2I ATGCAT 1 cut(s) 208
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.