RLG00000013828

Glutamate receptor

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Reverse (-)
42226773 .. 42230856
4084 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000013828

Sequence Viewer

Length: 2316 bp
ATGATCAACAAGAACCTCGCAAATCTTACTCTTGTTGTTTTCATTTGTTTCTTCTTTGTTTCATCAAGAATTGGCTTGGCCATGTTAGGAAATGAAACCATCCCCGTCAATGTGGGGGTTGTTCTTGATGATCTTGATTCAATGGAGGGGAAGGCTTGGTTGAGCTGTATCAAAATGGCCCTCTCAGATTTCTATGCTTCTCATTCTCACTACAAGACTAGGCTGGTTTTGAACGTTAGGGACTCGAATCAAAACGTTGTAGGGGCAGCTGCTGCAGCTCTGGATCTTATTAAAAATGCAGAAGTGCAAGCAATATTAGGGCCAGTGACATCAATGCAGGCAAACTTTGTTATCAACCTGGGAGACCAAGCTCATGTACCTATTATATCATTTTCTGCAACAAGCCCTTCTCTCACTTCCCTCCGGAGCTCCTACTTTTTCCGATTTACACAAAATGACTCATCCCAAGTGAAAGCCATAAGTGCTATTGTAAAAGGTTTTGGATGGAGACAAGTTGTGCTTGTGTATATAGACAATGATTTTGGGGAGGGAGTCATGTCACATATAACTGATGCTCTACAAGAGGTTGATGCTTTTGTCCCCTACCGGAGTGCCATTTCCCCATCAGCCACAGATAGTCAAATTCTTGAAGAACTTTACAAGTTGATGACCATGCAAACTAGAGTCTTCATAGTCCACATGACTTCTGATCTATCTTCTAGGCTGTTTGCCAAAGCTAAAGAGCTTGGAATGATGAGCGAAGGATATGCTTGGCTAACCACTAATGAGATACCAAACAGTTTAAAGTCGATGAAATCTTCAGTAATCCATTCGATGCGTGGTTTACTGGGTGTACAAACTTACGTTCCAATAACAAGTGAGCTTGATGTATTCAACAAAAGGTGGAAACAACAATTTCAAAAAGAGAATCCAGCCATCATTGATGCTGATTATGAAGTTTTTGGATTATGGGCTTATGATGCTACAGTTGCACTAGCAATGGCAGTTGAAGACGTTGGGATTACAAACTCTGGCTTCAAAAACTCAAATGCTTCCTTCAACTCAACAGATCTTGATACTCTTAAGGTATCTCAATATGGTCCAAAACTTGCTGAAGCATTGTCAAGTACTAGATTCAACGGCATAGCTGGAGACGTTAGCCTCATTGATGGGCAGCTTCAATCATCTACTTTTAAGATAGTCAATATAAATGGGGATGTAGTGAGAGGAGTTGGATTTTGGACATTACAAAGTGGAATCAAGAAAACATTGGGTCAATCCTCCGCAAACTGTTCAACATTAAATTGCAATCTCGGCCCAATTATATGGCCGGGAGATTCCTTCTCTGTTCCCAAGGGATGGGAGATTCCGACAAATGGCAAGAAGTTGAGAATAGGAGTTCCAATGAAGGATGGCTTTACTGAGTTTGTTAAGGTGACCAAAGATCCAAGTACCAACAGAACAGATATCACTGGATTTAGTATCGACGTGTTTAAGGCTGCGGTGGAATTGCTACCATATGCTCTTCCTTATGAGTTGATTCCATTTGCAAAGCCTGATGGCACCAGTGCAGGCACTTACAATGATTTAGTCTACCAAGTATTTCTTGAGTCTTCTGTTCATTCTTTTGTTTTCCACCATGCAACTATGGATATATTTTTTTTGTTTTTAACTTTGGTATTTAACTTGGCCAGATTTGTGATGATAATATGGGTATTTGTAATGCTAATCCTGACACAAAGTTACACGGCTAGTTTAGCATCACTATTAACTGTCCAACAACTCCACCCTATTGTCACCGATATAAAGGATCTGTTAAGGAACGGGGATACCGTCGGATATGCAGAGAATACATACGTTTACAATGTCTTGAGAGAAGTAGGTTTTGATGATTCGAAACTTAAGGAGTTTAAATCTACAGAAGATTTGGATGCTCTTCTTTCGAAAGGAAGTGCAAATGGTGGCATTGGTGCTGCAATTGATGAAACACCCAACATGAAGGTTTTTCTTGGAAAATATTGTTCCAAATATACAATGATTGGACCCATCTTTAAAACGGATGGGTTTGCTTTCGTCTTTCCAAAACGCTCCCCTCTTATACCAGATATTTCGCATGCAGTTCTAAGCGTGACCGAAGGAGAAAAGATACTAGACTTTGAAAATAAATGGTTCAAGAAAGAGAGTAACTGTGAAGACTTGAGTGCCCCAAAGGTGTCTAGCTATAGTCTTGGCCTTGAGAGCTTTTGGGGCCTATTCCTCGTTGCTGGAAGCATCGACATGGGGAAGGATTCGGGTCATGTTCAAAATTTTCAATGA

Protein Analysis

772

Amino Acids

84.9

Weight (kDa)

5.51

Isoelectric Point (pI)

29.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peripla_BP_6 PF13458 47 - 394 9.4e-23 Periplasmic binding protein
ANF_receptor PF01094 53 - 406 1.3e-84 Receptor family ligand binding region
Lig_chan PF00060 562 - 756 5.5e-19 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1562
AccB7I CCANNNNNTGG 1 cut(s) 1359
AccI GTMKAC 1 cut(s) 1593
AccIII TCCGGA 1 cut(s) 423
AciI CCGC 2 cut(s) 1284, 1502
AclI AACGTT 2 cut(s) 234, 255
AclWI GGATC 3 cut(s) 291, 1439, 1818
AcoI YGGCCR 3 cut(s) 78, 1328, 1689
AcsI RAATTY 2 cut(s) 642, 2305
AcuI CTGAAG 2 cut(s) 804, 1134
AfaI GTAC 4 cut(s) 378, 855, 1129, 1453
AfiI CCNNNNNNNGG 2 cut(s) 1359, 1376
AflII CTTAAG 2 cut(s) 1082, 1901
AflIII ACRYGT 1 cut(s) 1488
AjiI CACGTC 1 cut(s) 1489
AjnI CCWGG 1 cut(s) 357
Alw21I GWGCWC 1 cut(s) 431
Alw26I GTCTC 3 cut(s) 357, 502, 1146
AlwI GGATC 3 cut(s) 291, 1439, 1818
AlwNI CAGNNNCTG 1 cut(s) 272
Aor13HI TCCGGA 1 cut(s) 423
AoxI GGCC 8 cut(s) 78, 177, 320, 1315, 1328, 1689, 2230, 2248
ApeKI GCWGC 7 cut(s) 266, 269, 272, 275, 1174, 1499, 1973
ApoI RAATTY 2 cut(s) 642, 2305
ArsI GACNNNNNNTTYG 2 cut(s) 524, 556
AspS9I GGNCC 6 cut(s) 178, 320, 1100, 1316, 2042, 2248
AsuC2I CCSGG 1 cut(s) 1332
AsuHPI GGTGA 2 cut(s) 1447, 1789
AsuII TTCGAA 2 cut(s) 1895, 1943
AvaII GGWCC 2 cut(s) 1100, 2042
BaeGI GKGCMC 1 cut(s) 2206
BalI TGGCCA 2 cut(s) 80, 1691
BanI GGYRCC 1 cut(s) 1562
BanII GRGCYC 1 cut(s) 431
BbsI GAAGAC 4 cut(s) 679, 1017, 1605, 2199
Bbv12I GWGCWC 1 cut(s) 431
BbvI GCAGC 7 cut(s) 256, 259, 278, 287, 1186, 1486, 1960
BceAI ACGGC 2 cut(s) 1156, 1764
BcgI CGANNNNNNTGC 2 cut(s) 749, 783
BciT130I CCWGG 1 cut(s) 359
BciVI GTATCC 1 cut(s) 1822
BclI TGATCA 1 cut(s) 3
BcnI CCSGG 1 cut(s) 1332
BcoDI GTCTC 3 cut(s) 357, 502, 1146
BfaI CTAG 8 cut(s) 219, 681, 720, 995, 1131, 1752, 2150, 2217
BfmI CTRYAG 4 cut(s) 273, 984, 1917, 2221
BfrI CTTAAG 2 cut(s) 1082, 1901
BfuI GTATCC 1 cut(s) 1822
BglII AGATCT 1 cut(s) 1069
BisI GCNGC 7 cut(s) 267, 270, 273, 276, 1175, 1500, 1974
BlsI GCNGC 7 cut(s) 268, 271, 274, 277, 1176, 1501, 1975
BmcAI AGTACT 1 cut(s) 1129
Bme1390I CCNGG 2 cut(s) 359, 1332
Bme18I GGWCC 2 cut(s) 1100, 2042
BmgBI CACGTC 1 cut(s) 1489
BmgT120I GGNCC 6 cut(s) 178, 320, 1100, 1316, 2042, 2248
BmiI GGNNCC 3 cut(s) 1564, 2044, 2249
BmrFI CCNGG 2 cut(s) 359, 1332
BmrI ACTGGG 1 cut(s) 857
BmsI GCATC 8 cut(s) 562, 580, 825, 934, 970, 1769, 1921, 2280
BmuI ACTGGG 1 cut(s) 857
BpiI GAAGAC 4 cut(s) 679, 1017, 1605, 2199
BpmI CTGGAG 1 cut(s) 1170
Bpu14I TTCGAA 2 cut(s) 1895, 1943
BpuEI CTTGAG 4 cut(s) 1628, 1891, 2218, 2255
BpuMI CCSGG 1 cut(s) 1332
BsaI GGTCTC 1 cut(s) 357
BsaJI CCNNGG 2 cut(s) 358, 1353
BsaWI WCCGGW 2 cut(s) 423, 606
Bsc4I CCNNNNNNNGG 2 cut(s) 1359, 1376
Bse1I ACTGG 4 cut(s) 323, 852, 1477, 1566
Bse3DI GCAATG 1 cut(s) 1005
BseAI TCCGGA 1 cut(s) 423
BseBI CCWGG 1 cut(s) 359
BseDI CCNNGG 2 cut(s) 358, 1353
BseGI GGATG 8 cut(s) 99, 461, 509, 1222, 1364, 1417, 1936, 2065
BseLI CCNNNNNNNGG 2 cut(s) 1359, 1376
BseMI GCAATG 1 cut(s) 1005
BseMII CTCAG 2 cut(s) 198, 1413
BseNI ACTGG 4 cut(s) 323, 852, 1477, 1566
BseRI GAGGAG 1 cut(s) 1242
BseSI GKGCMC 1 cut(s) 2206
BseXI GCAGC 7 cut(s) 256, 259, 278, 287, 1186, 1486, 1960
BsgI GTGCAG 1 cut(s) 1590
BshFI GGCC 8 cut(s) 80, 179, 322, 1317, 1330, 1691, 2232, 2250
BshNI GGYRCC 1 cut(s) 1562
BsiHKAI GWGCWC 1 cut(s) 431
BsiSI CCGG 3 cut(s) 424, 607, 1331
BslFI GGGAC 2 cut(s) 254, 584
BslI CCNNNNNNNGG 2 cut(s) 1359, 1376
BsmAI GTCTC 3 cut(s) 357, 502, 1146
BsmBI CGTCTC 1 cut(s) 1146
BsmFI GGGAC 2 cut(s) 254, 584
BsnI GGCC 8 cut(s) 80, 179, 322, 1317, 1330, 1691, 2232, 2250
Bso31I GGTCTC 1 cut(s) 357
Bsp119I TTCGAA 2 cut(s) 1895, 1943
Bsp1286I GDGCHC 2 cut(s) 431, 2206
Bsp13I TCCGGA 1 cut(s) 423
Bsp1407I TGTACA 1 cut(s) 853
Bsp143I GATC 7 cut(s) 3, 130, 283, 709, 1069, 1444, 1810
BspACI CCGC 2 cut(s) 1284, 1502
BspANI GGCC 8 cut(s) 80, 179, 322, 1317, 1330, 1691, 2232, 2250
BspCNI CTCAG 2 cut(s) 197, 1414
BspEI TCCGGA 1 cut(s) 423
BspLI GGNNCC 3 cut(s) 1564, 2044, 2249
BspMAI CTGCAG 1 cut(s) 277
BspPI GGATC 3 cut(s) 291, 1439, 1818
BspQI GCTCTTC 2 cut(s) 1530, 1941
BspT104I TTCGAA 2 cut(s) 1895, 1943
BspT107I GGYRCC 1 cut(s) 1562
BspTI CTTAAG 2 cut(s) 1082, 1901
BspTNI GGTCTC 1 cut(s) 357
BsrDI GCAATG 1 cut(s) 1005
BsrGI TGTACA 1 cut(s) 853
BsrI ACTGG 4 cut(s) 323, 852, 1477, 1566
BssECI CCNNGG 2 cut(s) 358, 1353
BssMI GATC 7 cut(s) 3, 130, 283, 709, 1069, 1444, 1810
BssT1I CCWWGG 1 cut(s) 1353
Bst2UI CCWGG 1 cut(s) 359
Bst4CI ACNGT 6 cut(s) 800, 988, 1292, 1774, 1834, 2189
Bst6I CTCTTC 2 cut(s) 1530, 1941
BstAFI CTTAAG 2 cut(s) 1082, 1901
BstAPI GCANNNNNTGC 1 cut(s) 272
BstAUI TGTACA 1 cut(s) 853
BstBI TTCGAA 2 cut(s) 1895, 1943
BstC8I GCNNGC 4 cut(s) 309, 339, 1573, 2115
BstDEI CTNAG 3 cut(s) 184, 1422, 2123
BstEII GGTNACC 1 cut(s) 1435
BstF5I GGATG 8 cut(s) 99, 461, 509, 1222, 1364, 1417, 1936, 2065
BstKTI GATC 7 cut(s) 6, 133, 286, 712, 1072, 1447, 1813
BstMAI GTCTC 3 cut(s) 357, 502, 1146
BstMBI GATC 7 cut(s) 3, 130, 283, 709, 1069, 1444, 1810
BstMWI GCNNNNNNNGC 9 cut(s) 272, 275, 482, 980, 989, 1314, 1757, 2238, 2247
BstNI CCWGG 1 cut(s) 359
BstNSI RCATGY 1 cut(s) 2117
BstPI GGTNACC 1 cut(s) 1435
BstSCI CCNGG 2 cut(s) 357, 1330
BstSFI CTRYAG 4 cut(s) 273, 984, 1917, 2221
BstSLI GKGCMC 1 cut(s) 2206
BstV1I GCAGC 7 cut(s) 256, 259, 278, 287, 1186, 1486, 1960
BstV2I GAAGAC 4 cut(s) 679, 1017, 1605, 2199
BstX2I RGATCY 4 cut(s) 283, 1069, 1444, 1810
BstXI CCANNNNNNTGG 1 cut(s) 1326
BstYI RGATCY 4 cut(s) 283, 1069, 1444, 1810
BsuI GTATCC 1 cut(s) 1822
BsuRI GGCC 8 cut(s) 80, 179, 322, 1317, 1330, 1691, 2232, 2250
BtrI CACGTC 1 cut(s) 1489
BtsCI GGATG 8 cut(s) 99, 461, 509, 1222, 1364, 1417, 1936, 2065
BtsIMutI CAGTG 3 cut(s) 330, 1470, 1573
Cac8I GCNNGC 4 cut(s) 309, 339, 1573, 2115
CaiI CAGNNNCTG 1 cut(s) 272
Cfr13I GGNCC 6 cut(s) 178, 320, 1100, 1316, 2042, 2248
Csp6I GTAC 4 cut(s) 377, 854, 1128, 1452
CviQI GTAC 4 cut(s) 377, 854, 1128, 1452
DdeI CTNAG 3 cut(s) 184, 1422, 2123
DpnI GATC 7 cut(s) 5, 132, 285, 711, 1071, 1446, 1812
DpnII GATC 7 cut(s) 3, 130, 283, 709, 1069, 1444, 1810
DraI TTTAAA 3 cut(s) 804, 1912, 2053
EaeI YGGCCR 3 cut(s) 78, 1328, 1689
Eam1104I CTCTTC 2 cut(s) 1530, 1941
EarI CTCTTC 2 cut(s) 1530, 1941
Ecl136II GAGCTC 1 cut(s) 429
Eco130I CCWWGG 1 cut(s) 1353
Eco24I GRGCYC 1 cut(s) 431
Eco31I GGTCTC 1 cut(s) 357
Eco32I GATATC 1 cut(s) 1468
Eco47I GGWCC 2 cut(s) 1100, 2042
Eco53kI GAGCTC 1 cut(s) 429
Eco57I CTGAAG 2 cut(s) 804, 1134
Eco91I GGTNACC 1 cut(s) 1435
EcoICRI GAGCTC 1 cut(s) 429
EcoO109I RGGNCCY 1 cut(s) 2248
EcoO65I GGTNACC 1 cut(s) 1435
EcoRII CCWGG 1 cut(s) 357
EcoRV GATATC 1 cut(s) 1468
EcoT14I CCWWGG 1 cut(s) 1353
EcoT38I GRGCYC 1 cut(s) 431
ErhI CCWWGG 1 cut(s) 1353
Esp3I CGTCTC 1 cut(s) 1146
FalI AAGNNNNNCTT 6 cut(s) 504, 536, 1400, 1432, 1590, 1622
FaqI GGGAC 2 cut(s) 254, 584
FauNDI CATATG 1 cut(s) 1519
FbaI TGATCA 1 cut(s) 3
FblI GTMKAC 1 cut(s) 1593
Fnu4HI GCNGC 7 cut(s) 267, 270, 273, 276, 1175, 1500, 1974
FokI GGATG 8 cut(s) 86, 448, 516, 1229, 1371, 1424, 1943, 2072
FriOI GRGCYC 1 cut(s) 431
Fsp4HI GCNGC 7 cut(s) 267, 270, 273, 276, 1175, 1500, 1974
FspBI CTAG 8 cut(s) 219, 681, 720, 995, 1131, 1752, 2150, 2217
GluI GCNGC 7 cut(s) 267, 270, 273, 276, 1175, 1500, 1974
GsuI CTGGAG 1 cut(s) 1170
HaeIII GGCC 8 cut(s) 80, 179, 322, 1317, 1330, 1691, 2232, 2250
HapII CCGG 3 cut(s) 424, 607, 1331
HpaII CCGG 3 cut(s) 424, 607, 1331
HphI GGTGA 2 cut(s) 1447, 1789
Hpy166II GTNNAC 5 cut(s) 697, 845, 854, 1594, 1861
Hpy188I TCNGA 5 cut(s) 187, 443, 709, 1371, 1838
Hpy8I GTNNAC 5 cut(s) 697, 845, 854, 1594, 1861
Hpy99I CGWCG 2 cut(s) 1490, 1838
HpyAV CCTTC 9 cut(s) 145, 417, 755, 1066, 1351, 1402, 1993, 2129, 2278
HpyCH4III ACNGT 6 cut(s) 800, 988, 1292, 1774, 1834, 2189
HpyCH4IV ACGT 7 cut(s) 234, 255, 864, 1014, 1155, 1488, 1857
HpyF10VI GCNNNNNNNGC 9 cut(s) 272, 275, 482, 980, 989, 1314, 1757, 2238, 2247
HpyF3I CTNAG 3 cut(s) 184, 1422, 2123
HpySE526I ACGT 7 cut(s) 234, 255, 864, 1014, 1155, 1488, 1857
Kpn2I TCCGGA 1 cut(s) 423
Ksp22I TGATCA 1 cut(s) 3
Kzo9I GATC 7 cut(s) 3, 130, 283, 709, 1069, 1444, 1810
LguI GCTCTTC 2 cut(s) 1530, 1941
LmnI GCTCC 3 cut(s) 426, 434, 2093
Lsp1109I GCAGC 7 cut(s) 256, 259, 278, 287, 1186, 1486, 1960
LweI GCATC 8 cut(s) 562, 580, 825, 934, 970, 1769, 1921, 2280
MaeI CTAG 8 cut(s) 219, 681, 720, 995, 1131, 1752, 2150, 2217
MaeII ACGT 7 cut(s) 234, 255, 864, 1014, 1155, 1488, 1857
MaeIII GTNAC 7 cut(s) 325, 558, 1435, 1742, 1795, 2128, 2183
MalI GATC 7 cut(s) 5, 132, 285, 711, 1071, 1446, 1812
MboI GATC 7 cut(s) 3, 130, 283, 709, 1069, 1444, 1810
MfeI CAATTG 1 cut(s) 1977
MflI RGATCY 4 cut(s) 283, 1069, 1444, 1810
MhlI GDGCHC 2 cut(s) 431, 2206
MlsI TGGCCA 2 cut(s) 80, 1691
MluCI AATT 8 cut(s) 69, 642, 914, 1303, 1320, 1508, 1977, 2305
MluNI TGGCCA 2 cut(s) 80, 1691
MlyI GAGTC 5 cut(s) 236, 452, 561, 693, 1619
MmeI TCCRAC 4 cut(s) 1213, 1394, 1801, 1816
Mox20I TGGCCA 2 cut(s) 80, 1691
MroI TCCGGA 1 cut(s) 423
MscI TGGCCA 2 cut(s) 80, 1691
MslI CAYNNNNRTG 1 cut(s) 2276
Msp20I TGGCCA 2 cut(s) 80, 1691
MspA1I CMGCKG 1 cut(s) 269
MspCI CTTAAG 2 cut(s) 1082, 1901
MspI CCGG 3 cut(s) 424, 607, 1331
MspR9I CCNGG 2 cut(s) 359, 1332
MunI CAATTG 1 cut(s) 1977
MvaI CCWGG 1 cut(s) 359
MwoI GCNNNNNNNGC 9 cut(s) 272, 275, 482, 980, 989, 1314, 1757, 2238, 2247
NciI CCSGG 1 cut(s) 1332
NdeI CATATG 1 cut(s) 1519
NdeII GATC 7 cut(s) 3, 130, 283, 709, 1069, 1444, 1810
NlaIV GGNNCC 3 cut(s) 1564, 2044, 2249
NmeAIII GCCGAG 1 cut(s) 1293
NmuCI GTSAC 5 cut(s) 325, 558, 1435, 1795, 2128
NspI RCATGY 1 cut(s) 2117
NspV TTCGAA 2 cut(s) 1895, 1943
PaeI GCATGC 1 cut(s) 2117
PciSI GCTCTTC 2 cut(s) 1530, 1941
PcsI WCGNNNNNNNCGW 1 cut(s) 1830
PflMI CCANNNNNTGG 1 cut(s) 1359
PkrI GCNGC 7 cut(s) 268, 271, 274, 277, 1176, 1501, 1975
PleI GAGTC 5 cut(s) 236, 452, 560, 692, 1618
PpsI GAGTC 5 cut(s) 236, 452, 560, 692, 1618
Psp124BI GAGCTC 1 cut(s) 431
Psp1406I AACGTT 2 cut(s) 234, 255
Psp6I CCWGG 1 cut(s) 357
PspEI GGTNACC 1 cut(s) 1435
PspGI CCWGG 1 cut(s) 357
PspN4I GGNNCC 3 cut(s) 1564, 2044, 2249
PspPI GGNCC 6 cut(s) 178, 320, 1100, 1316, 2042, 2248
PstI CTGCAG 1 cut(s) 277
PstNI CAGNNNCTG 1 cut(s) 272
PsuI RGATCY 4 cut(s) 283, 1069, 1444, 1810
PvuII CAGCTG 1 cut(s) 269
RsaI GTAC 4 cut(s) 378, 855, 1129, 1453
RsaNI GTAC 4 cut(s) 377, 854, 1128, 1452
RseI CAYNNNNRTG 1 cut(s) 2276
SacI GAGCTC 1 cut(s) 431
SapI GCTCTTC 2 cut(s) 1530, 1941
SatI GCNGC 7 cut(s) 267, 270, 273, 276, 1175, 1500, 1974
Sau3AI GATC 7 cut(s) 3, 130, 283, 709, 1069, 1444, 1810
Sau96I GGNCC 6 cut(s) 178, 320, 1100, 1316, 2042, 2248
ScaI AGTACT 1 cut(s) 1129
SchI GAGTC 5 cut(s) 236, 452, 561, 693, 1619
ScrFI CCNGG 2 cut(s) 359, 1332
SduI GDGCHC 2 cut(s) 431, 2206
SfaNI GCATC 8 cut(s) 562, 580, 825, 934, 970, 1769, 1921, 2280
SfcI CTRYAG 4 cut(s) 273, 984, 1917, 2221
SfuI TTCGAA 2 cut(s) 1895, 1943
SinI GGWCC 2 cut(s) 1100, 2042
SmiMI CAYNNNNRTG 1 cut(s) 2276
SmlI CTYRAG 6 cut(s) 1082, 1607, 1870, 1901, 2197, 2234
SmoI CTYRAG 6 cut(s) 1082, 1607, 1870, 1901, 2197, 2234
SphI GCATGC 1 cut(s) 2117
Sse9I AATT 8 cut(s) 69, 642, 914, 1303, 1320, 1508, 1977, 2305
SsiI CCGC 2 cut(s) 1284, 1502
SspI AATATT 2 cut(s) 315, 2018
SspMI CTAG 8 cut(s) 219, 681, 720, 995, 1131, 1752, 2150, 2217
SstI GAGCTC 1 cut(s) 431
StyD4I CCNGG 2 cut(s) 357, 1330
StyI CCWWGG 1 cut(s) 1353
TaaI ACNGT 6 cut(s) 800, 988, 1292, 1774, 1834, 2189
TaiI ACGT 7 cut(s) 237, 258, 867, 1017, 1158, 1491, 1860
TaqI TCGA 7 cut(s) 245, 809, 833, 1485, 1895, 1943, 2274
TaqII GACCGA 1 cut(s) 2147
TasI AATT 8 cut(s) 69, 642, 914, 1303, 1320, 1508, 1977, 2305
TatI WGTACW 2 cut(s) 853, 1127
TscAI CASTG 3 cut(s) 330, 1477, 1573
TseFI GTSAC 5 cut(s) 325, 558, 1435, 1795, 2128
TseI GCWGC 7 cut(s) 266, 269, 272, 275, 1174, 1499, 1973
Tsp45I GTSAC 5 cut(s) 325, 558, 1435, 1795, 2128
TspGWI ACGGA 1 cut(s) 2072
TspRI CASTG 3 cut(s) 330, 1477, 1573
Van91I CCANNNNNTGG 1 cut(s) 1359
Vha464I CTTAAG 2 cut(s) 1082, 1901
VpaK11BI GGWCC 2 cut(s) 1100, 2042
XapI RAATTY 2 cut(s) 642, 2305
XceI RCATGY 1 cut(s) 2117
XcmI CCANNNNNNNNNTGG 1 cut(s) 836
XmiI GTMKAC 1 cut(s) 1593
XspI CTAG 8 cut(s) 219, 681, 720, 995, 1131, 1752, 2150, 2217
ZrmI AGTACT 1 cut(s) 1129
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.