Prupe.1G399500_v2.0.a1

Glutamate receptor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000051
Physical Location & Seq
Forward (+)
35310870 .. 35314171
3302 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G399500.1

Sequence Viewer

Length: 2805 bp
ATGGGACAGAACAGAACAGTAATCCCAGTGAATGTTGGCGTGGTTCTTGATGACCTCGATTCACTAACCGGAAAAGTTTGGTTGAGCTGCCTCAAAATGGCCCTCTCAGATTTCTATGCCTCCCATGGTTCCTCCACAACTAGGCTTGCCTTGAGCATCAGGGACCCTAGAGAAGATGTTGTAGATGCAGCTGCTGCAGCTTTAGACCTGATCAAGAATGTTCAAGTGCAAGCAATCATAGGACCTACATCATCAATGCAAGCCAACTTTGTAATTGATCTTGGAGACAAAGCCAAGGTTCCCATAATCTCATTTTCTGCAACGAGTCCTTCCCTCACTTCTATTCGGAGTTCATACTTTTTCCGAGCTGCACAGAATGATTCCTCTCAAGTCAAAGCCATAAGTGCTATTGTTCAAGCCTTTGGGTGGAGAAGAGCTGTGCCCATCTATGTAGACAACGAGTTTGGTGAGGGAGTTTTACCATCCTTGGTCGATGCTTTGCATGACGTTCAAGCTCGTGTTCCCTACCGTTGTGCCATACCTCCAATGGCCACTGACGACCAACTTACAGCAGCGCTTTACAAGTTAATGACTATGCAAACTAGGGTCTTCATTGTGCACATGTCGCAGTCTCTTGGGGCTAGGCTTTTTGCCAAGGCACAAGAGATTGGAATGATGAAAGAAGGCTATGTTTGGATCATGACCAATGGATTAACCAATCTTGTAAGTTCGACTGATGCTTCAGTCATCAAGTCAATGCAAGGTGTATTGGGTGTAAGGACTAGTGTGCCGAAAACAGAAGAGCTTATCGATTTTAGAGTTCGATGGAAAACGCAATTCCAACAGCAAAATCCAACCATCATTGATGTAGAATTGGATGTTTTTGCTCTCTGGGCTTATGATGCTGCTTTTGCATTAGCCATGGCACTTGAGAATGATGGGACTGGGACTGGCAGAATCTCTAGCTTCCAAAACACAAATGCTTCCATCAACTCATCAACTGATCTTCTGACTTTCGGGGTATCTGAAAACGGCCCGAAACTTTTCCAATCCTTATCAAACACCAAGTTTAAAGGCCTTGCAGGAGACTTTAGTTTTGTCAATGGGCAACTACAATCTCCAGTCTTCGAAATAGTCAATGTGAATGGCAATGGGGCAAGAGAAATTGGGTTCTGGACACCAGAGAGTGGACTTTTGAAAAATTCCATGAACTCAACAAACACGAACAGAACATATTCAACTTCACAATCCAACATGGGACCCATCATATGGCCAGGAGATTCCACCTCAGTTCCCAAGGGATGGGAGATCCCTACAAACGAAAAAAAGTTGAGAGTGGGAGTTCCTGTGAAGATTGGCTCTCCTGAGTTTGTTAAGGTGGTACGTGATCCTAGTACCAACAAAACACTTGTTTCTGGCTACTGCATTGACATCTTCAATGCTGTCATGGAAAAATTACCATATGCTGTAACTTATGACTTCATTCCCTTTGCAAAGCCTGATGGTACAAGTGCTGGCACTTACAATCAGTTGGTGGATCAAGTTTATCTTGGGAACTTTGATGCTTTGGCCGCAGCCACAACAATCAGAGAGAACAGGTCCTTGTATGTGGACTTTACCTTGCCATACACGGAATCAGGGGTAGTAATGGTAGTTCCAACAAAAGATAGCAAGAGCCAGAATGCATGGGTTTTCTTGAAGCCTTTGACATGGGACCTCTGGCTTACAAGTTCTTGCTTTTTCATCTTCATTGGTTTTGTGATTTGGGTTCTTGAACATCGCATCAATGAAGATTTTCGTGGCCCTCTCTCGAATCAAGTCGGAACAGGCTTGTGGTTCTCCTTCTCAACCATGGTTTTTGCACACAGGGAGGCAGTGGTTAGCAACTTGGCTAGATTTGTGGTGATAGTATGGGTATTTGTTGTGCTCATACTCACTCAAAGTTACACAGCTAGTCTGACTTCACTCTTAACAATCCAAGAGCTCCAGCCAACTTTTACCGATTTAAACCAGCTTCTAAAGAACAAGGAGAGTGTGGGCTACCCGAAGGGCTCTTTCGTCTACCAACTTTTGTTGAAACAAGGTTTTGATGATTTGAAGATTAAGGCTTATCAATCTCCAGAAGAATGTGATGACCTTTTGACAAAAGGGAGTGCAAAAGGTGGCATTGCTGCTGCTGTTGATGAAACCCCAAACTTGAGGCTTTTTATTGCAAAGTATTGCTCCAAATACACCATCATTGGACCAATATTTAAGACTAATGGCTTTGCCTTTGTCTTGCCCAAAGGTTCGGCTCTTGTACCTGATGTTTCAAGGGCAATTCTGAACCTGACCGATGGAGACGAGATGAAGGAGATTGAAAACAAATGGTTTGGAAAACAAGCCACTTGTGAATATACAAAATCACCATTCTCTGATTCCAAAAGTCTTGGCCTGAATAGCTTCTGGGGCCTCTTACTCATTGCTAGGGTGGCTTCATCCTCAGCTCTTATGATATCTGTAGCCACTTTCCTTTTTATGCACAGACACATCCTAATGACAAGAGGCACCTCTGTATGGAAAAGAATTGGTGTCATGCTTAGCATCTTTCTCCAAAGAGACCTCTCCTCCCACACTTTTAGAAACAAGAATTCGGGTCATGTTGTGGAGGCCTCACCAGTCTCCTCCAGCATTGGCCAACCAAGTCCCTTTAGCCTCTCAAACCACACAGGTCCAGCATCACCTTTCTTCAGTGAACAAGGAACACCTGTTTCTGTTGCTGTTTACCAGAACCCAGAAATACCTACAACTCCTGATCAAGGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

935

Amino Acids

102.56

Weight (kDa)

6.82

Isoelectric Point (pI)

33.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 2546
AccB7I CCANNNNNTGG 3 cut(s) 1187, 1269, 1302
AccI GTMKAC 2 cut(s) 453, 2061
AciI CCGC 1 cut(s) 1572
AclWI GGATC 4 cut(s) 704, 1303, 1382, 1545
AcoI YGGCCR 4 cut(s) 549, 1271, 1569, 2674
AcsI RAATTY 2 cut(s) 1201, 2629
AcuI CTGAAG 2 cut(s) 726, 2713
AfaI GTAC 4 cut(s) 1383, 1396, 1507, 2301
AfeI AGCGCT 1 cut(s) 576
AfiI CCNNNNNNNGG 8 cut(s) 97, 141, 426, 1187, 1269, 1302, 2556, 2798
AflIII ACRYGT 1 cut(s) 621
AhlI ACTAGT 1 cut(s) 782
AjnI CCWGG 1 cut(s) 1273
Alw21I GWGCWC 3 cut(s) 621, 1929, 1986
Alw26I GTCTC 6 cut(s) 279, 636, 1080, 2334, 2592, 2665
Alw44I GTGCAC 1 cut(s) 617
AlwI GGATC 4 cut(s) 704, 1303, 1382, 1545
AlwNI CAGNNNCTG 1 cut(s) 194
Aor51HI AGCGCT 1 cut(s) 576
ApaLI GTGCAC 1 cut(s) 617
ApoI RAATTY 2 cut(s) 1201, 2629
ArsI GACNNNNNNTTYG 4 cut(s) 446, 478, 1079, 1111
Asp700I GAANNNNTTC 4 cut(s) 1043, 1234, 1794, 2441
AspLEI GCGC 1 cut(s) 577
AsuHPI GGTGA 5 cut(s) 479, 1915, 2397, 2646, 2712
AsuII TTCGAA 1 cut(s) 1128
AvaII GGWCC 7 cut(s) 163, 242, 1259, 1599, 1714, 2243, 2711
BaeGI GKGCMC 2 cut(s) 444, 621
BalI TGGCCA 3 cut(s) 551, 1273, 2676
BanI GGYRCC 1 cut(s) 2546
BanII GRGCYC 2 cut(s) 1986, 2054
BauI CACGAG 1 cut(s) 516
BbsI GAAGAC 2 cut(s) 601, 1117
Bbv12I GWGCWC 3 cut(s) 621, 1929, 1986
BbvCI CCTCAGC 1 cut(s) 2482
BceAI ACGGC 1 cut(s) 1048
BciT130I CCWGG 1 cut(s) 1275
BclI TGATCA 2 cut(s) 210, 2794
BcoDI GTCTC 6 cut(s) 279, 636, 1080, 2334, 2592, 2665
BcuI ACTAGT 1 cut(s) 782
BfmI CTRYAG 2 cut(s) 195, 2499
BfoI RGCGCY 1 cut(s) 578
BlpI GCTNAGC 1 cut(s) 2579
Bme1390I CCNGG 1 cut(s) 1275
Bme18I GGWCC 7 cut(s) 163, 242, 1259, 1599, 1714, 2243, 2711
BmiI GGNNCC 9 cut(s) 130, 164, 165, 300, 1260, 1261, 1715, 2450, 2548
BmrFI CCNGG 1 cut(s) 1275
BmrI ACTGGG 2 cut(s) 20, 954
BmsI GCATC 9 cut(s) 165, 175, 484, 727, 892, 1552, 1791, 2592, 2726
BmuI ACTGGG 2 cut(s) 20, 954
BpiI GAAGAC 2 cut(s) 601, 1117
BpmI CTGGAG 4 cut(s) 1104, 1970, 2103, 2650
Bpu10I CCTNAGC 1 cut(s) 2482
Bpu1102I GCTNAGC 1 cut(s) 2579
Bpu14I TTCGAA 1 cut(s) 1128
BpuEI CTTGAG 4 cut(s) 172, 372, 950, 2218
Bsa29I ATCGAT 1 cut(s) 810
BsaAI YACGTR 1 cut(s) 1385
BsaI GGTCTC 1 cut(s) 2592
BsaJI CCNNGG 7 cut(s) 124, 294, 486, 654, 921, 1296, 1851
BsaWI WCCGGW 1 cut(s) 68
BsaXI ACNNNNNCTCC 4 cut(s) 1332, 1362, 2591, 2621
Bsc4I CCNNNNNNNGG 8 cut(s) 97, 141, 426, 1187, 1269, 1302, 2556, 2798
Bse1I ACTGG 5 cut(s) 26, 949, 955, 1121, 2657
Bse3DI GCAATG 3 cut(s) 1156, 2166, 2460
BseBI CCWGG 1 cut(s) 1275
BseCI ATCGAT 1 cut(s) 810
BseDI CCNNGG 7 cut(s) 124, 294, 486, 654, 921, 1296, 1851
BseGI GGATG 5 cut(s) 482, 883, 1307, 2477, 2529
BseLI CCNNNNNNNGG 8 cut(s) 97, 141, 426, 1187, 1269, 1302, 2556, 2798
BseMI GCAATG 3 cut(s) 1156, 2166, 2460
BseMII CTCAG 4 cut(s) 120, 1302, 1356, 2496
BseNI ACTGG 5 cut(s) 26, 949, 955, 1121, 2657
BseRI GAGGAG 2 cut(s) 2596, 2653
BseSI GKGCMC 2 cut(s) 444, 621
BsgI GTGCAG 1 cut(s) 354
BshNI GGYRCC 1 cut(s) 2546
BshVI ATCGAT 1 cut(s) 810
BsiHKAI GWGCWC 3 cut(s) 621, 1929, 1986
BsiSI CCGG 1 cut(s) 69
BslFI GGGAC 7 cut(s) 18, 176, 955, 961, 1272, 1727, 2670
BslI CCNNNNNNNGG 8 cut(s) 97, 141, 426, 1187, 1269, 1302, 2556, 2798
BsmAI GTCTC 6 cut(s) 279, 636, 1080, 2334, 2592, 2665
BsmBI CGTCTC 1 cut(s) 2334
BsmFI GGGAC 7 cut(s) 18, 176, 955, 961, 1272, 1727, 2670
BsmI GAATGC 1 cut(s) 1687
Bso31I GGTCTC 1 cut(s) 2592
Bsp119I TTCGAA 1 cut(s) 1128
Bsp1286I GDGCHC 5 cut(s) 444, 621, 1929, 1986, 2054
Bsp143I GATC 8 cut(s) 210, 277, 696, 1003, 1308, 1387, 1537, 2794
Bsp1720I GCTNAGC 1 cut(s) 2579
Bsp19I CCATGG 3 cut(s) 124, 921, 1851
BspACI CCGC 1 cut(s) 1572
BspCNI CTCAG 4 cut(s) 119, 1301, 1357, 2495
BspDI ATCGAT 1 cut(s) 810
BspHI TCATGA 1 cut(s) 699
BspLI GGNNCC 9 cut(s) 130, 164, 165, 300, 1260, 1261, 1715, 2450, 2548
BspMAI CTGCAG 1 cut(s) 199
BspPI GGATC 4 cut(s) 704, 1303, 1382, 1545
BspQI GCTCTTC 2 cut(s) 427, 795
BspT104I TTCGAA 1 cut(s) 1128
BspT107I GGYRCC 1 cut(s) 2546
BspTNI GGTCTC 1 cut(s) 2592
BsrDI GCAATG 3 cut(s) 1156, 2166, 2460
BsrI ACTGG 5 cut(s) 26, 949, 955, 1121, 2657
BssECI CCNNGG 7 cut(s) 124, 294, 486, 654, 921, 1296, 1851
BssMI GATC 8 cut(s) 210, 277, 696, 1003, 1308, 1387, 1537, 2794
BssSI CACGAG 1 cut(s) 516
BssT1I CCWWGG 7 cut(s) 124, 294, 486, 654, 921, 1296, 1851
Bst2BI CACGAG 1 cut(s) 516
Bst2UI CCWGG 1 cut(s) 1275
Bst4CI ACNGT 2 cut(s) 19, 530
Bst6I CTCTTC 2 cut(s) 427, 795
BstAPI GCANNNNNTGC 1 cut(s) 194
BstBAI YACGTR 1 cut(s) 1385
BstBI TTCGAA 1 cut(s) 1128
BstC8I GCNNGC 4 cut(s) 147, 231, 261, 1516
BstDEI CTNAG 5 cut(s) 106, 1288, 1365, 2482, 2579
BstDSI CCRYGG 3 cut(s) 124, 921, 1851
BstENI CCTNNNNNAGG 1 cut(s) 2796
BstF5I GGATG 5 cut(s) 482, 883, 1307, 2477, 2529
BstH2I RGCGCY 1 cut(s) 578
BstHHI GCGC 1 cut(s) 577
BstKTI GATC 8 cut(s) 213, 280, 699, 1006, 1311, 1390, 1540, 2797
BstMAI GTCTC 6 cut(s) 279, 636, 1080, 2334, 2592, 2665
BstMBI GATC 8 cut(s) 210, 277, 696, 1003, 1308, 1387, 1537, 2794
BstNI CCWGG 1 cut(s) 1275
BstNSI RCATGY 1 cut(s) 625
BstSCI CCNGG 1 cut(s) 1273
BstSFI CTRYAG 2 cut(s) 195, 2499
BstSLI GKGCMC 2 cut(s) 444, 621
BstV2I GAAGAC 2 cut(s) 601, 1117
BstX2I RGATCY 1 cut(s) 1308
BstYI RGATCY 1 cut(s) 1308
Bsu15I ATCGAT 1 cut(s) 810
BsuTUI ATCGAT 1 cut(s) 810
BtgI CCRYGG 3 cut(s) 124, 921, 1851
BtgZI GCGATG 1 cut(s) 1763
BtsCI GGATG 5 cut(s) 482, 883, 1307, 2477, 2529
BtsI GCAGTG 1 cut(s) 1881
BtsIMutI CAGTG 4 cut(s) 33, 552, 1881, 2737
Cac8I GCNNGC 4 cut(s) 147, 231, 261, 1516
CaiI CAGNNNCTG 1 cut(s) 194
CciI TCATGA 1 cut(s) 699
CfoI GCGC 1 cut(s) 577
ClaI ATCGAT 1 cut(s) 810
Csp6I GTAC 4 cut(s) 1382, 1395, 1506, 2300
CviQI GTAC 4 cut(s) 1382, 1395, 1506, 2300
DdeI CTNAG 5 cut(s) 106, 1288, 1365, 2482, 2579
DpnI GATC 8 cut(s) 212, 279, 698, 1005, 1310, 1389, 1539, 2796
DpnII GATC 8 cut(s) 210, 277, 696, 1003, 1308, 1387, 1537, 2794
DraI TTTAAA 2 cut(s) 1072, 2007
EaeI YGGCCR 4 cut(s) 549, 1271, 1569, 2674
Eam1104I CTCTTC 2 cut(s) 427, 795
EarI CTCTTC 2 cut(s) 427, 795
Ecl136II GAGCTC 1 cut(s) 1984
Eco130I CCWWGG 7 cut(s) 124, 294, 486, 654, 921, 1296, 1851
Eco147I AGGCCT 2 cut(s) 1077, 2651
Eco24I GRGCYC 2 cut(s) 1986, 2054
Eco31I GGTCTC 1 cut(s) 2592
Eco32I GATATC 1 cut(s) 2496
Eco47I GGWCC 7 cut(s) 163, 242, 1259, 1599, 1714, 2243, 2711
Eco47III AGCGCT 1 cut(s) 576
Eco53kI GAGCTC 1 cut(s) 1984
Eco57I CTGAAG 2 cut(s) 726, 2713
EcoICRI GAGCTC 1 cut(s) 1984
EcoNI CCTNNNNNAGG 1 cut(s) 2796
EcoO109I RGGNCCY 6 cut(s) 163, 242, 1259, 1599, 1714, 2449
EcoRI GAATTC 1 cut(s) 2629
EcoRII CCWGG 1 cut(s) 1273
EcoRV GATATC 1 cut(s) 2496
EcoT14I CCWWGG 7 cut(s) 124, 294, 486, 654, 921, 1296, 1851
EcoT22I ATGCAT 1 cut(s) 1687
EcoT38I GRGCYC 2 cut(s) 1986, 2054
ErhI CCWWGG 7 cut(s) 124, 294, 486, 654, 921, 1296, 1851
Esp3I CGTCTC 1 cut(s) 2334
FalI AAGNNNNNCTT 2 cut(s) 1533, 1565
FaqI GGGAC 7 cut(s) 18, 176, 955, 961, 1272, 1727, 2670
FauNDI CATATG 2 cut(s) 1268, 1462
FbaI TGATCA 2 cut(s) 210, 2794
FblI GTMKAC 2 cut(s) 453, 2061
FokI GGATG 5 cut(s) 469, 890, 1314, 2464, 2516
FriOI GRGCYC 2 cut(s) 1986, 2054
GlaI GCGC 1 cut(s) 576
GsuI CTGGAG 4 cut(s) 1104, 1970, 2103, 2650
HaeII RGCGCY 1 cut(s) 578
HapII CCGG 1 cut(s) 69
HhaI GCGC 1 cut(s) 577
Hin6I GCGC 1 cut(s) 575
HinP1I GCGC 1 cut(s) 575
HinfI GANTC 8 cut(s) 59, 325, 380, 957, 1280, 1634, 1813, 2417
HpaII CCGG 1 cut(s) 69
HphI GGTGA 5 cut(s) 479, 1915, 2397, 2646, 2712
Hpy166II GTNNAC 7 cut(s) 454, 619, 1190, 1612, 2062, 2735, 2764
Hpy8I GTNNAC 7 cut(s) 454, 619, 1190, 1612, 2062, 2735, 2764
HpyAV CCTTC 5 cut(s) 339, 677, 1852, 2041, 2344
HpyCH4III ACNGT 2 cut(s) 19, 530
HpyCH4IV ACGT 2 cut(s) 507, 1384
HpyF3I CTNAG 5 cut(s) 106, 1288, 1365, 2482, 2579
HpySE526I ACGT 2 cut(s) 507, 1384
HspAI GCGC 1 cut(s) 575
KflI GGGWCCC 2 cut(s) 163, 1259
Ksp22I TGATCA 2 cut(s) 210, 2794
Kzo9I GATC 8 cut(s) 210, 277, 696, 1003, 1308, 1387, 1537, 2794
LguI GCTCTTC 2 cut(s) 427, 795
LmnI GCTCC 2 cut(s) 1989, 2228
LweI GCATC 9 cut(s) 165, 175, 484, 727, 892, 1552, 1791, 2592, 2726
MaeII ACGT 2 cut(s) 507, 1384
MaeIII GTNAC 2 cut(s) 1468, 1943
MalI GATC 8 cut(s) 212, 279, 698, 1005, 1310, 1389, 1539, 2796
MboI GATC 8 cut(s) 210, 277, 696, 1003, 1308, 1387, 1537, 2794
MflI RGATCY 1 cut(s) 1308
MhlI GDGCHC 5 cut(s) 444, 621, 1929, 1986, 2054
MlsI TGGCCA 3 cut(s) 551, 1273, 2676
MluCI AATT 9 cut(s) 273, 836, 872, 1164, 1201, 1454, 2319, 2565, 2629
MluNI TGGCCA 3 cut(s) 551, 1273, 2676
MlyI GAGTC 1 cut(s) 334
MmeI TCCRAC 5 cut(s) 865, 878, 1275, 1682, 1801
Mox20I TGGCCA 3 cut(s) 551, 1273, 2676
Mph1103I ATGCAT 1 cut(s) 1687
MroXI GAANNNNTTC 4 cut(s) 1043, 1234, 1794, 2441
MscI TGGCCA 3 cut(s) 551, 1273, 2676
MseI TTAA 8 cut(s) 587, 713, 1071, 1374, 1970, 2006, 2103, 2253
MslI CAYNNNNRTG 1 cut(s) 2534
Msp20I TGGCCA 3 cut(s) 551, 1273, 2676
MspA1I CMGCKG 1 cut(s) 191
MspI CCGG 1 cut(s) 69
MspR9I CCNGG 1 cut(s) 1275
Mva1269I GAATGC 1 cut(s) 1687
MvaI CCWGG 1 cut(s) 1275
NcoI CCATGG 3 cut(s) 124, 921, 1851
NdeI CATATG 2 cut(s) 1268, 1462
NdeII GATC 8 cut(s) 210, 277, 696, 1003, 1308, 1387, 1537, 2794
NlaIV GGNNCC 9 cut(s) 130, 164, 165, 300, 1260, 1261, 1715, 2450, 2548
NsiI ATGCAT 1 cut(s) 1687
NspI RCATGY 1 cut(s) 625
NspV TTCGAA 1 cut(s) 1128
PagI TCATGA 1 cut(s) 699
PceI AGGCCT 2 cut(s) 1077, 2651
PciI ACATGT 1 cut(s) 621
PciSI GCTCTTC 2 cut(s) 427, 795
PctI GAATGC 1 cut(s) 1687
PdmI GAANNNNTTC 4 cut(s) 1043, 1234, 1794, 2441
PfeI GAWTC 7 cut(s) 59, 380, 957, 1280, 1634, 1813, 2417
PflMI CCANNNNNTGG 3 cut(s) 1187, 1269, 1302
PleI GAGTC 1 cut(s) 333
PpsI GAGTC 1 cut(s) 333
Ppu21I YACGTR 1 cut(s) 1385
PpuMI RGGWCCY 5 cut(s) 163, 242, 1259, 1599, 1714
PscI ACATGT 1 cut(s) 621
Psp124BI GAGCTC 1 cut(s) 1986
Psp5II RGGWCCY 5 cut(s) 163, 242, 1259, 1599, 1714
Psp6I CCWGG 1 cut(s) 1273
PspGI CCWGG 1 cut(s) 1273
PspN4I GGNNCC 9 cut(s) 130, 164, 165, 300, 1260, 1261, 1715, 2450, 2548
PspPPI RGGWCCY 5 cut(s) 163, 242, 1259, 1599, 1714
PsrI GAACNNNNNNTAC 2 cut(s) 1638, 1670
PstI CTGCAG 1 cut(s) 199
PstNI CAGNNNCTG 1 cut(s) 194
PsuI RGATCY 1 cut(s) 1308
PvuII CAGCTG 1 cut(s) 191
RsaI GTAC 4 cut(s) 1383, 1396, 1507, 2301
RsaNI GTAC 4 cut(s) 1382, 1395, 1506, 2300
RseI CAYNNNNRTG 1 cut(s) 2534
SacI GAGCTC 1 cut(s) 1986
SapI GCTCTTC 2 cut(s) 427, 795
SaqAI TTAA 8 cut(s) 587, 713, 1071, 1374, 1970, 2006, 2103, 2253
Sau3AI GATC 8 cut(s) 210, 277, 696, 1003, 1308, 1387, 1537, 2794
SchI GAGTC 1 cut(s) 334
ScrFI CCNGG 1 cut(s) 1275
SduI GDGCHC 5 cut(s) 444, 621, 1929, 1986, 2054
SfaNI GCATC 9 cut(s) 165, 175, 484, 727, 892, 1552, 1791, 2592, 2726
SfcI CTRYAG 2 cut(s) 195, 2499
SfuI TTCGAA 1 cut(s) 1128
SinI GGWCC 7 cut(s) 163, 242, 1259, 1599, 1714, 2243, 2711
SmiMI CAYNNNNRTG 1 cut(s) 2534
SmlI CTYRAG 4 cut(s) 151, 387, 929, 2197
SmoI CTYRAG 4 cut(s) 151, 387, 929, 2197
SpeI ACTAGT 1 cut(s) 782
Sse9I AATT 9 cut(s) 273, 836, 872, 1164, 1201, 1454, 2319, 2565, 2629
SseBI AGGCCT 2 cut(s) 1077, 2651
SsiI CCGC 1 cut(s) 1572
SspI AATATT 1 cut(s) 2250
SstI GAGCTC 1 cut(s) 1986
StuI AGGCCT 2 cut(s) 1077, 2651
StyD4I CCNGG 1 cut(s) 1273
StyI CCWWGG 7 cut(s) 124, 294, 486, 654, 921, 1296, 1851
TaaI ACNGT 2 cut(s) 19, 530
TaiI ACGT 2 cut(s) 510, 1387
TaqI TCGA 7 cut(s) 57, 492, 731, 810, 823, 1128, 1811
TaqII GACCGA 1 cut(s) 2348
TasI AATT 9 cut(s) 273, 836, 872, 1164, 1201, 1454, 2319, 2565, 2629
TauI GCSGC 1 cut(s) 1574
TfiI GAWTC 7 cut(s) 59, 380, 957, 1280, 1634, 1813, 2417
Tru1I TTAA 8 cut(s) 587, 713, 1071, 1374, 1970, 2006, 2103, 2253
Tru9I TTAA 8 cut(s) 587, 713, 1071, 1374, 1970, 2006, 2103, 2253
TscAI CASTG 4 cut(s) 33, 559, 1881, 2737
TspGWI ACGGA 1 cut(s) 1646
TspRI CASTG 4 cut(s) 33, 559, 1881, 2737
Van91I CCANNNNNTGG 3 cut(s) 1187, 1269, 1302
VneI GTGCAC 1 cut(s) 617
VpaK11BI GGWCC 7 cut(s) 163, 242, 1259, 1599, 1714, 2243, 2711
XagI CCTNNNNNAGG 1 cut(s) 2796
XapI RAATTY 2 cut(s) 1201, 2629
XceI RCATGY 1 cut(s) 625
XcmI CCANNNNNNNNNTGG 1 cut(s) 544
XmiI GTMKAC 2 cut(s) 453, 2061
XmnI GAANNNNTTC 4 cut(s) 1043, 1234, 1794, 2441
Zsp2I ATGCAT 1 cut(s) 1687
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.