Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0000051

Physical Location & Seq

Genomic Coordinates Reverse (-)

37033803 .. 37039544

Gene Structure 5742 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G025850.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2751 bp

ATGGAGAATCAGAGGAGAAGTATCCTTCTTCTTTTCTCATGGATTTTCATGGTCGCCACCATGGCAGCTGCAAGCACAACGATAATCCCAGTGAACGTGGGAGTTGTTGTAGACCTTGATGGACCGAGTGGGAAAATGTACTCGAGTTGCATCGAAATGGCGCTCTCGGATTTCTATGCTAGCCATGCTGACTACAAGACTAGGCTCGTTTTGAACACCAGGAACTCCAATGGAGATGTGGTTGGAGCAGCTGCCGCAGCTTTACATCTGATAAAGAATGTAGAAGTGAAAGCCATCCTAGGACCGGTGTCATCCATGCAGGCAAGTTTCGTTGTTAATCTTGGAGAGCAAGCTCATGTACCCATCATATCATTTTCTGCAACAAGCCCTTCTCTTACTTCACTACGGAGCTCCTATTTTTTCCAATTTGCACAAAATGACTTGAACCAAGTGAAAGCTATAAGTGGAATTGTTCAGAACTTTGGATGGAGACGAGTTGTGCCCATCTATGTAGACAATATCTATGGGGAAGGAGTCATACCTTTTCTAATTGATGCCTTGCAAGAGGTTGATGTTCATATCCCCTACAGAAGTCTAATTCACGAACTAGCCACTGATGATCAAATTGAAAAAGAGCTTTACAAGTTGATGACGATGCAGACTCGAGTCTTCATTGTGCATATGATGCCTAATCTTTCCTCTCGGCTATTTGCCAAGGCAAAAGAGATGGGAATGATGAGTGAGGGTTTTGTTTGGATCACAACTAATAGTATTGGAAATAATTTAAAGTCTATGGCTTCAGTCCTTGATTCGATGCAAGGCCTATTAGGTGTAGAAACTTACATTCCAAGGACATTGAAGCTTAGACAATTCATATCAAGGTGGAAAAGGCAATTCCAACTAGACAATCCAAAAATCATTGATAAAGTTGCCAATGCAGGTTTCAAATTCCAAAAGAGGAATGCTTCTTCCTTCAACTCAACAGATCTTGATACTTTTGAGGTCTCTCATTATGGCTCAAAACTTTCTCATGCATTATCCATTATTAATTTCAAAGGTATGGCTGGAGACTTCAATCTTGTTAATAGGCAACTTCAGGTATCAACTTTTGAGATTGTTAATGTGAATGGTTATGGCGCAAGAACAGTTGGATATTGGACTCCAGAAAACGGAAGGGTAGTAAAGTGGTTGAACTCAACAAGAAATAGAACAATATCAACTTCCAAGTGCGATCTTGGACCTATTATATGGCCTGGAGAGTCATTATCAGTTCCTAAAGGATGGGAGATCCCGACAAATGGTACCAAGTTAAGAATAGGAGTTCCTGTGAAGGAAGGTTTTCTAGAGTTTGTTAAAGTAACCAGCTATCCAAGCACTAATACAGTTGACGTCACTGGGTGCAGTATTGACGTGTTTAAAGCCGTATTAGAGATCCTACCATATGCACTTCCTTATGAGTTTGTTCCCTTTGCAATGGCTAATGGAAGCAGCGCTGGCACATACAATGATTTGGTGTATCAAGTATATGCTGGGAAGTTTGATGCTGTGGTTGGAGATATAACAATTAGAGCAAATAGGTCATTGTATGTGGGCTTTACTATGCCATATACCGAATCTGGTGTAGTGATGGTTGTGCCAATACAAGACAAGAGGACCAAAAGTGCATGGGTTTTCTTAAAGCCTTTGACATGGGACCTTTGGATGACAACTTTGTGTTTTTTCATGTTTATTGGTTTTGTGATTTGGGTGCTTGAACATCGAATTAATGATGATTTTCGTGGTTCTCCCTCACATCAAGTTGGCACAAGCTTCTGGTTCTCTTTCTCAACCATGGTTTTCTCACAAAGGGAGAAGGTGGTTAGCAACTTGGCAAGATTTGTGATGATTATATGGATATTCGTTGTACTAATAGTGACACAGAGCTATACAGCTAGTCTAGCATCACTATTGACAGTCCAACAACTCCAACCAACTGTTACCGATATAGATGATCTTTTGAGGAATAGAGATAATGTGGGCTACACGACGAATTCTTTTATTTATGGTCTCTTGAGACAAAAAGGTTTTCATGATTCCAGGCTTAAGGATTATGGAACTATGGAACAAATAGATGAAGCTCTTTCAAAGGGTAGTGCAAATGGCGGTATTGCTGCTATTGTTCATGAAACCCCCTATATGAAGCTTTTTGTTGCAAAATATTGTTCCAAGTATACCATGATTGGACCTATATTTAAAACTGATGGCTTTGGCTTCGTATTTCCAAAAGGTTCTCCTCTTATACCCGATGTTTCACAAGCAATCCTTAATTTGACAGAAGGAGAGAAGATAATGAACATTGAAGGCGAATGGATGAAAAAAGAAAACAATTGTAAAGATCCAAGTACCGACAAATTTTACAGCAATATTTTGATGTCCTCTGATTCAAAAGCTTCCAAGTGGAAAAGGATTAGGACCATGTTCAAGATTTTCAATGAAAAAGAACTTAGCTCTCATACTTTTAAAAGCAGTAGGCATGAAGCTAGGATCGCTGGTGCTCCGAATCATGAAGTGAATGCCTCACCAAATAACAACTGGCCAGAAAGTCCATTCAGCTATACCAACCAGACGGATGCAACTTCTGTATTCTACGGAGAGCAAGAAACACCATCTCACGGTCAAGCATCTCCAGAAATCGTTCCAACTTTTGAGCTTGCTGCTTTCACTAATCAAGAAATGCATGCAACTCCGGAAACAGCTCAAGAAAGAGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0007154 GO:0007165 GO:0008066 GO:0008150 GO:0008324 GO:0009719 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0043200 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046873 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

916

Amino Acids

102.66

Weight (kDa)

7.98

Isoelectric Point (pI)

34.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peripla_BP_6	PF13458	30 - 302	8.4e-19	Periplasmic binding protein
ANF_receptor	PF01094	50 - 377	2.4e-68	Receptor family ligand binding region
Lig_chan-Glu_bd	PF10613	458 - 545	1.7e-06	Ligated ion channel L-glutamate- and glycine-binding site
SBP_bac_3	PF00497	461 - 785	1.9e-08	Bacterial extracellular solute-binding proteins, family 3
Lig_chan	PF00060	563 - 797	3.3e-35	Ligand-gated ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

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Orthologous Genes (Group: OG0000051)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca	FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica	MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica	Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis	pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis	RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata	RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora	Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii	Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa	Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha	Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana	Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1392
Acc36I	ACCTGC	1 cut(s)	929
Acc65I	GGTACC	1 cut(s)	1301
AccB1I	GGYRCC	1 cut(s)	1301
AccI	GTMKAC	3 cut(s)	111, 513, 2210
AccIII	TCCGGA	1 cut(s)	2725
AciI	CCGC	2 cut(s)	255, 2142
AclWI	GGATC	5 cut(s)	764, 1282, 1426, 2369, 2531
AcoI	YGGCCR	1 cut(s)	2573
AcsI	RAATTY	3 cut(s)	947, 2029, 2390
AcuI	CTGAAG	2 cut(s)	783, 1079
AcyI	GRCGYC	1 cut(s)	1389
AdeI	CACNNNGTG	1 cut(s)	1398
AfaI	GTAC	5 cut(s)	140, 360, 1303, 1905, 2383
AfeI	AGCGCT	1 cut(s)	1492
AfiI	CCNNNNNNNGG	4 cut(s)	304, 1169, 1298, 2651
AflII	CTTAAG	1 cut(s)	2081
AflIII	ACRYGT	1 cut(s)	1410
AgeI	ACCGGT	1 cut(s)	304
AjiI	CACGTC	1 cut(s)	1411
AjnI	CCWGG	3 cut(s)	218, 1252, 2075
AjuI	GAANNNNNNNTTGG	2 cut(s)	926, 958
Alw21I	GWGCWC	2 cut(s)	413, 2536
Alw26I	GTCTC	5 cut(s)	484, 1009, 1062, 2047, 2051
AlwI	GGATC	5 cut(s)	764, 1282, 1426, 2369, 2531
Ama87I	CYCGRG	2 cut(s)	142, 663
Aor13HI	TCCGGA	1 cut(s)	2725
Aor51HI	AGCGCT	1 cut(s)	1492
AoxI	GGCC	3 cut(s)	820, 1250, 2573
ApeKI	GCWGC	8 cut(s)	65, 68, 248, 251, 257, 1488, 2150, 2693
ApoI	RAATTY	3 cut(s)	947, 2029, 2390
AseI	ATTAAT	2 cut(s)	1047, 1764
AsiGI	ACCGGT	1 cut(s)	304
Asp700I	GAANNNNTTC	2 cut(s)	1338, 2673
Asp718I	GGTACC	1 cut(s)	1301
AspA2I	CCTAGG	1 cut(s)	298
AspLEI	GCGC	3 cut(s)	163, 1139, 1493
AspS9I	GGNCC	7 cut(s)	122, 302, 1238, 1653, 1693, 2222, 2451
AsuHPI	GGTGA	1 cut(s)	2550
AsuNHI	GCTAGC	1 cut(s)	179
AvaI	CYCGRG	2 cut(s)	142, 663
AvaII	GGWCC	7 cut(s)	122, 302, 1238, 1653, 1693, 2222, 2451
AvrII	CCTAGG	1 cut(s)	298
BaeGI	GKGCMC	1 cut(s)	504
BalI	TGGCCA	1 cut(s)	2575
BanI	GGYRCC	1 cut(s)	1301
BanII	GRGCYC	1 cut(s)	413
BarI	GAAGNNNNNNTAC	2 cut(s)	522, 554
BbsI	GAAGAC	1 cut(s)	661
Bbv12I	GWGCWC	2 cut(s)	413, 2536
BbvI	GCAGC	8 cut(s)	55, 77, 238, 260, 269, 1500, 2137, 2680
BceAI	ACGGC	1 cut(s)	1406
BciT130I	CCWGG	3 cut(s)	220, 1254, 2077
BciVI	GTATCC	1 cut(s)	32
BclI	TGATCA	1 cut(s)	619
BcoDI	GTCTC	5 cut(s)	484, 1009, 1062, 2047, 2051
BfaI	CTAG	9 cut(s)	180, 201, 299, 608, 902, 1343, 1932, 1937, 2520
BfmI	CTRYAG	1 cut(s)	586
BfoI	RGCGCY	2 cut(s)	164, 1494
BfrI	CTTAAG	1 cut(s)	2081
BfuAI	ACCTGC	1 cut(s)	929
BfuI	GTATCC	1 cut(s)	32
BglI	GCCNNNNNGGC	1 cut(s)	62
BglII	AGATCT	1 cut(s)	985
BisI	GCNGC	9 cut(s)	66, 69, 249, 252, 255, 258, 1489, 2151, 2694
BlnI	CCTAGG	1 cut(s)	298
BlsI	GCNGC	9 cut(s)	67, 70, 250, 253, 256, 259, 1490, 2152, 2695
Bme1390I	CCNGG	3 cut(s)	220, 1254, 2077
Bme18I	GGWCC	7 cut(s)	122, 302, 1238, 1653, 1693, 2222, 2451
BmeT110I	CYCGRG	2 cut(s)	142, 663
BmgBI	CACGTC	1 cut(s)	1411
BmgT120I	GGNCC	7 cut(s)	122, 302, 1238, 1653, 1693, 2222, 2451
BmiI	GGNNCC	2 cut(s)	1303, 1694
BmrFI	CCNGG	3 cut(s)	220, 1254, 2077
BmrI	ACTGGG	2 cut(s)	83, 1404
BmsI	GCATC	9 cut(s)	159, 544, 645, 675, 804, 1531, 1949, 2599, 2669
BmtI	GCTAGC	1 cut(s)	183
BmuI	ACTGGG	2 cut(s)	83, 1404
BoxI	GACNNNNGTC	2 cut(s)	307, 665
BpiI	GAAGAC	1 cut(s)	661
BpmI	CTGGAG	4 cut(s)	1086, 1146, 1275, 2649
BpuEI	CTTGAG	2 cut(s)	2071, 2721
BsaHI	GRCGYC	1 cut(s)	1389
BsaI	GGTCTC	2 cut(s)	1009, 2051
BsaJI	CCNNGG	5 cut(s)	60, 298, 714, 848, 1830
BsaWI	WCCGGW	2 cut(s)	304, 2725
BsaXI	ACNNNNNCTCC	6 cut(s)	93, 123, 225, 255, 1311, 1341
Bsc4I	CCNNNNNNNGG	4 cut(s)	304, 1169, 1298, 2651
Bse118I	RCCGGY	1 cut(s)	304
Bse1I	ACTGG	3 cut(s)	89, 1399, 2576
Bse3DI	GCAATG	1 cut(s)	1479
BseAI	TCCGGA	1 cut(s)	2725
BseBI	CCWGG	3 cut(s)	220, 1254, 2077
BseDI	CCNNGG	5 cut(s)	60, 298, 714, 848, 1830
BseGI	GGATG	7 cut(s)	294, 311, 491, 1286, 1707, 2355, 2614
BseLI	CCNNNNNNNGG	4 cut(s)	304, 1169, 1298, 2651
BseMI	GCAATG	1 cut(s)	1479
BseNI	ACTGG	3 cut(s)	89, 1399, 2576
BseRI	GAGGAG	2 cut(s)	28, 2262
BseSI	GKGCMC	1 cut(s)	504
BseXI	GCAGC	8 cut(s)	55, 77, 238, 260, 269, 1500, 2137, 2680
BseYI	CCCAGC	1 cut(s)	1529
BsgI	GTGCAG	1 cut(s)	1420
BshFI	GGCC	3 cut(s)	822, 1252, 2575
BshNI	GGYRCC	1 cut(s)	1301
BshTI	ACCGGT	1 cut(s)	304
BsiHKAI	GWGCWC	2 cut(s)	413, 2536
BsiHKCI	CYCGRG	2 cut(s)	142, 663
BsiSI	CCGG	2 cut(s)	305, 2726
BslFI	GGGAC	1 cut(s)	1706
BslI	CCNNNNNNNGG	4 cut(s)	304, 1169, 1298, 2651
BsmAI	GTCTC	5 cut(s)	484, 1009, 1062, 2047, 2051
BsmBI	CGTCTC	1 cut(s)	484
BsmFI	GGGAC	1 cut(s)	1706
BsmI	GAATGC	2 cut(s)	967, 2557
BsnI	GGCC	3 cut(s)	822, 1252, 2575
Bso31I	GGTCTC	2 cut(s)	1009, 2051
BsoBI	CYCGRG	2 cut(s)	142, 663
Bsp1286I	GDGCHC	3 cut(s)	413, 504, 2536
Bsp13I	TCCGGA	1 cut(s)	2725
Bsp143I	GATC	9 cut(s)	619, 756, 985, 1231, 1287, 1431, 1990, 2374, 2523
Bsp19I	CCATGG	2 cut(s)	60, 1830
BspACI	CCGC	2 cut(s)	255, 2142
BspANI	GGCC	3 cut(s)	822, 1252, 2575
BspEI	TCCGGA	1 cut(s)	2725
BspHI	TCATGA	3 cut(s)	2068, 2161, 2542
BspLI	GGNNCC	2 cut(s)	1303, 1694
BspMI	ACCTGC	1 cut(s)	929
BspOI	GCTAGC	1 cut(s)	183
BspPI	GGATC	5 cut(s)	764, 1282, 1426, 2369, 2531
BspT107I	GGYRCC	1 cut(s)	1301
BspTI	CTTAAG	1 cut(s)	2081
BspTNI	GGTCTC	2 cut(s)	1009, 2051
BsrDI	GCAATG	1 cut(s)	1479
BsrFI	RCCGGY	1 cut(s)	304
BsrI	ACTGG	3 cut(s)	89, 1399, 2576
BssAI	RCCGGY	1 cut(s)	304
BssECI	CCNNGG	5 cut(s)	60, 298, 714, 848, 1830
BssMI	GATC	9 cut(s)	619, 756, 985, 1231, 1287, 1431, 1990, 2374, 2523
BssNAI	GTATAC	1 cut(s)	2211
BssNI	GRCGYC	1 cut(s)	1389
BssT1I	CCWWGG	5 cut(s)	60, 298, 714, 848, 1830
Bst1107I	GTATAC	1 cut(s)	2211
Bst2UI	CCWGG	3 cut(s)	220, 1254, 2077
Bst4CI	ACNGT	5 cut(s)	1147, 1384, 1954, 1975, 2654
BstACI	GRCGYC	1 cut(s)	1389
BstAFI	CTTAAG	1 cut(s)	2081
BstAPI	GCANNNNNTGC	1 cut(s)	685
BstC8I	GCNNGC	7 cut(s)	73, 181, 321, 351, 1495, 2691, 2718
BstDEI	CTNAG	2 cut(s)	863, 2483
BstDSI	CCRYGG	2 cut(s)	60, 1830
BstF5I	GGATG	7 cut(s)	294, 311, 491, 1286, 1707, 2355, 2614
BstH2I	RGCGCY	2 cut(s)	164, 1494
BstHHI	GCGC	3 cut(s)	163, 1139, 1493
BstKTI	GATC	9 cut(s)	622, 759, 988, 1234, 1290, 1434, 1993, 2377, 2526
BstMAI	GTCTC	5 cut(s)	484, 1009, 1062, 2047, 2051
BstMBI	GATC	9 cut(s)	619, 756, 985, 1231, 1287, 1431, 1990, 2374, 2523
BstMWI	GCNNNNNNNGC	9 cut(s)	62, 185, 254, 257, 685, 1371, 1494, 1937, 2525
BstNI	CCWGG	3 cut(s)	220, 1254, 2077
BstNSI	RCATGY	1 cut(s)	2720
BstPAI	GACNNNNGTC	2 cut(s)	307, 665
BstSCI	CCNGG	3 cut(s)	218, 1252, 2075
BstSFI	CTRYAG	1 cut(s)	586
BstSLI	GKGCMC	1 cut(s)	504
BstV1I	GCAGC	8 cut(s)	55, 77, 238, 260, 269, 1500, 2137, 2680
BstV2I	GAAGAC	1 cut(s)	661
BstX2I	RGATCY	4 cut(s)	985, 1287, 1431, 2374
BstYI	RGATCY	4 cut(s)	985, 1287, 1431, 2374
BstZ17I	GTATAC	1 cut(s)	2211
BsuI	GTATCC	1 cut(s)	32
BsuRI	GGCC	3 cut(s)	822, 1252, 2575
BtgI	CCRYGG	2 cut(s)	60, 1830
BtrI	CACGTC	1 cut(s)	1411
BtsCI	GGATG	7 cut(s)	294, 311, 491, 1286, 1707, 2355, 2614
BtsIMutI	CAGTG	3 cut(s)	96, 612, 1392
BveI	ACCTGC	1 cut(s)	929
Cac8I	GCNNGC	7 cut(s)	73, 181, 321, 351, 1495, 2691, 2718
CciI	TCATGA	3 cut(s)	2068, 2161, 2542
CfoI	GCGC	3 cut(s)	163, 1139, 1493
Cfr10I	RCCGGY	1 cut(s)	304
Cfr13I	GGNCC	7 cut(s)	122, 302, 1238, 1653, 1693, 2222, 2451
Csp6I	GTAC	5 cut(s)	139, 359, 1302, 1904, 2382
CspAI	ACCGGT	1 cut(s)	304
CviQI	GTAC	5 cut(s)	139, 359, 1302, 1904, 2382
DdeI	CTNAG	2 cut(s)	863, 2483
DpnI	GATC	9 cut(s)	621, 758, 987, 1233, 1289, 1433, 1992, 2376, 2525
DpnII	GATC	9 cut(s)	619, 756, 985, 1231, 1287, 1431, 1990, 2374, 2523
DraI	TTTAAA	4 cut(s)	786, 1417, 2233, 2500
DraIII	CACNNNGTG	1 cut(s)	1398
EaeI	YGGCCR	1 cut(s)	2573
Ecl136II	GAGCTC	1 cut(s)	411
Eco130I	CCWWGG	5 cut(s)	60, 298, 714, 848, 1830
Eco147I	AGGCCT	1 cut(s)	822
Eco24I	GRGCYC	1 cut(s)	413
Eco31I	GGTCTC	2 cut(s)	1009, 2051
Eco47I	GGWCC	7 cut(s)	122, 302, 1238, 1653, 1693, 2222, 2451
Eco47III	AGCGCT	1 cut(s)	1492
Eco53kI	GAGCTC	1 cut(s)	411
Eco57I	CTGAAG	2 cut(s)	783, 1079
Eco88I	CYCGRG	2 cut(s)	142, 663
EcoICRI	GAGCTC	1 cut(s)	411
EcoO109I	RGGNCCY	1 cut(s)	1693
EcoRI	GAATTC	1 cut(s)	2029
EcoRII	CCWGG	3 cut(s)	218, 1252, 2075
EcoT14I	CCWWGG	5 cut(s)	60, 298, 714, 848, 1830
EcoT22I	ATGCAT	2 cut(s)	1036, 2718
EcoT38I	GRGCYC	1 cut(s)	413
ErhI	CCWWGG	5 cut(s)	60, 298, 714, 848, 1830
Esp3I	CGTCTC	1 cut(s)	484
FalI	AAGNNNNNCTT	2 cut(s)	2286, 2318
FaqI	GGGAC	1 cut(s)	1706
FauNDI	CATATG	2 cut(s)	681, 1441
FbaI	TGATCA	1 cut(s)	619
FblI	GTMKAC	3 cut(s)	111, 513, 2210
Fnu4HI	GCNGC	9 cut(s)	66, 69, 249, 252, 255, 258, 1489, 2151, 2694
FokI	GGATG	7 cut(s)	281, 298, 498, 1293, 1714, 2362, 2621
FriOI	GRGCYC	1 cut(s)	413
Fsp4HI	GCNGC	9 cut(s)	66, 69, 249, 252, 255, 258, 1489, 2151, 2694
FspBI	CTAG	9 cut(s)	180, 201, 299, 608, 902, 1343, 1932, 1937, 2520
GlaI	GCGC	3 cut(s)	162, 1138, 1492
GluI	GCNGC	9 cut(s)	66, 69, 249, 252, 255, 258, 1489, 2151, 2694
GsaI	CCCAGC	1 cut(s)	1533
GsuI	CTGGAG	4 cut(s)	1086, 1146, 1275, 2649
HaeII	RGCGCY	2 cut(s)	164, 1494
HaeIII	GGCC	3 cut(s)	822, 1252, 2575
HapII	CCGG	2 cut(s)	305, 2726
HhaI	GCGC	3 cut(s)	163, 1139, 1493
Hin1I	GRCGYC	1 cut(s)	1389
Hin6I	GCGC	3 cut(s)	161, 1137, 1491
HinP1I	GCGC	3 cut(s)	161, 1137, 1491
HincII	GTYRAC	1 cut(s)	1387
HindII	GTYRAC	1 cut(s)	1387
HindIII	AAGCTT	4 cut(s)	860, 1807, 2180, 2427
HpaII	CCGG	2 cut(s)	305, 2726
HphI	GGTGA	1 cut(s)	2550
Hpy166II	GTNNAC	5 cut(s)	94, 112, 514, 1387, 2211
Hpy188I	TCNGA	6 cut(s)	12, 169, 270, 477, 2419, 2538
Hpy8I	GTNNAC	5 cut(s)	94, 112, 514, 1387, 2211
Hpy99I	CGWCG	1 cut(s)	2029
HpyCH4III	ACNGT	5 cut(s)	1147, 1384, 1954, 1975, 2654
HpyCH4IV	ACGT	3 cut(s)	96, 1389, 1410
HpyF10VI	GCNNNNNNNGC	9 cut(s)	62, 185, 254, 257, 685, 1371, 1494, 1937, 2525
HpyF3I	CTNAG	2 cut(s)	863, 2483
HpySE526I	ACGT	3 cut(s)	96, 1389, 1410
Hsp92I	GRCGYC	1 cut(s)	1389
HspAI	GCGC	3 cut(s)	161, 1137, 1491
Kpn2I	TCCGGA	1 cut(s)	2725
KpnI	GGTACC	1 cut(s)	1305
Ksp22I	TGATCA	1 cut(s)	619
Kzo9I	GATC	9 cut(s)	619, 756, 985, 1231, 1287, 1431, 1990, 2374, 2523
LmnI	GCTCC	4 cut(s)	245, 408, 416, 2539
Lsp1109I	GCAGC	8 cut(s)	55, 77, 238, 260, 269, 1500, 2137, 2680
LweI	GCATC	9 cut(s)	159, 544, 645, 675, 804, 1531, 1949, 2599, 2669
MaeI	CTAG	9 cut(s)	180, 201, 299, 608, 902, 1343, 1932, 1937, 2520
MaeII	ACGT	3 cut(s)	96, 1389, 1410
MaeIII	GTNAC	4 cut(s)	1357, 1390, 1912, 1975
MalI	GATC	9 cut(s)	621, 758, 987, 1233, 1289, 1433, 1992, 2376, 2525
MboI	GATC	9 cut(s)	619, 756, 985, 1231, 1287, 1431, 1990, 2374, 2523
MboII	GAAGA	4 cut(s)	20, 661, 960, 2335
MfeI	CAATTG	1 cut(s)	2365
MflI	RGATCY	4 cut(s)	985, 1287, 1431, 2374
MhlI	GDGCHC	3 cut(s)	413, 504, 2536
MlsI	TGGCCA	1 cut(s)	2575
MluNI	TGGCCA	1 cut(s)	2575
MlyI	GAGTC	5 cut(s)	543, 655, 675, 1153, 1268
MmeI	TCCRAC	7 cut(s)	223, 922, 1129, 1531, 1981, 1990, 2702
Mox20I	TGGCCA	1 cut(s)	2575
Mph1103I	ATGCAT	2 cut(s)	1036, 2718
MroI	TCCGGA	1 cut(s)	2725
MroXI	GAANNNNTTC	2 cut(s)	1338, 2673
MscI	TGGCCA	1 cut(s)	2575
MslI	CAYNNNNRTG	1 cut(s)	155
Msp20I	TGGCCA	1 cut(s)	2575
MspA1I	CMGCKG	2 cut(s)	68, 251
MspCI	CTTAAG	1 cut(s)	2081
MspI	CCGG	2 cut(s)	305, 2726
MspR9I	CCNGG	3 cut(s)	220, 1254, 2077
MunI	CAATTG	1 cut(s)	2365
Mva1269I	GAATGC	2 cut(s)	967, 2557
MvaI	CCWGG	3 cut(s)	220, 1254, 2077
MwoI	GCNNNNNNNGC	9 cut(s)	62, 185, 254, 257, 685, 1371, 1494, 1937, 2525
NcoI	CCATGG	2 cut(s)	60, 1830
NdeI	CATATG	2 cut(s)	681, 1441
NdeII	GATC	9 cut(s)	619, 756, 985, 1231, 1287, 1431, 1990, 2374, 2523
NheI	GCTAGC	1 cut(s)	179
NlaIV	GGNNCC	2 cut(s)	1303, 1694
NmeAIII	GCCGAG	1 cut(s)	682
NmuCI	GTSAC	2 cut(s)	1390, 1912
NsiI	ATGCAT	2 cut(s)	1036, 2718
NspI	RCATGY	1 cut(s)	2720
PaeI	GCATGC	1 cut(s)	2720
PaeR7I	CTCGAG	2 cut(s)	142, 663
PagI	TCATGA	3 cut(s)	2068, 2161, 2542
PceI	AGGCCT	1 cut(s)	822
PctI	GAATGC	2 cut(s)	967, 2557
PdmI	GAANNNNTTC	2 cut(s)	1338, 2673
PfeI	GAWTC	6 cut(s)	7, 809, 1613, 2072, 2420, 2539
PinAI	ACCGGT	1 cut(s)	304
PkrI	GCNGC	9 cut(s)	67, 70, 250, 253, 256, 259, 1490, 2152, 2695
PleI	GAGTC	5 cut(s)	542, 655, 674, 1153, 1267
PpsI	GAGTC	5 cut(s)	542, 655, 674, 1153, 1267
PpuMI	RGGWCCY	1 cut(s)	1693
PshAI	GACNNNNGTC	2 cut(s)	307, 665
PshBI	ATTAAT	2 cut(s)	1047, 1764
Psp124BI	GAGCTC	1 cut(s)	413
Psp5II	RGGWCCY	1 cut(s)	1693
Psp6I	CCWGG	3 cut(s)	218, 1252, 2075
PspFI	CCCAGC	1 cut(s)	1529
PspGI	CCWGG	3 cut(s)	218, 1252, 2075
PspN4I	GGNNCC	2 cut(s)	1303, 1694
PspPI	GGNCC	7 cut(s)	122, 302, 1238, 1653, 1693, 2222, 2451
PspPPI	RGGWCCY	1 cut(s)	1693
PspXI	VCTCGAGB	2 cut(s)	142, 663
PsuI	RGATCY	4 cut(s)	985, 1287, 1431, 2374
PvuII	CAGCTG	2 cut(s)	68, 251
RsaI	GTAC	5 cut(s)	140, 360, 1303, 1905, 2383
RsaNI	GTAC	5 cut(s)	139, 359, 1302, 1904, 2382
RseI	CAYNNNNRTG	1 cut(s)	155
SacI	GAGCTC	1 cut(s)	413
SatI	GCNGC	9 cut(s)	66, 69, 249, 252, 255, 258, 1489, 2151, 2694
Sau3AI	GATC	9 cut(s)	619, 756, 985, 1231, 1287, 1431, 1990, 2374, 2523
Sau96I	GGNCC	7 cut(s)	122, 302, 1238, 1653, 1693, 2222, 2451
SchI	GAGTC	5 cut(s)	543, 655, 675, 1153, 1268
ScrFI	CCNGG	3 cut(s)	220, 1254, 2077
SduI	GDGCHC	3 cut(s)	413, 504, 2536
SfaNI	GCATC	9 cut(s)	159, 544, 645, 675, 804, 1531, 1949, 2599, 2669
SfcI	CTRYAG	1 cut(s)	586
Sfr274I	CTCGAG	2 cut(s)	142, 663
SinI	GGWCC	7 cut(s)	122, 302, 1238, 1653, 1693, 2222, 2451
SlaI	CTCGAG	2 cut(s)	142, 663
SmiMI	CAYNNNNRTG	1 cut(s)	155
SmlI	CTYRAG	5 cut(s)	142, 663, 2050, 2081, 2736
SmoI	CTYRAG	5 cut(s)	142, 663, 2050, 2081, 2736
SphI	GCATGC	1 cut(s)	2720
SseBI	AGGCCT	1 cut(s)	822
SsiI	CCGC	2 cut(s)	255, 2142
SspI	AATATT	2 cut(s)	2198, 2404
SspMI	CTAG	9 cut(s)	180, 201, 299, 608, 902, 1343, 1932, 1937, 2520
SstI	GAGCTC	1 cut(s)	413
StuI	AGGCCT	1 cut(s)	822
StyD4I	CCNGG	3 cut(s)	218, 1252, 2075
StyI	CCWWGG	5 cut(s)	60, 298, 714, 848, 1830
TaaI	ACNGT	5 cut(s)	1147, 1384, 1954, 1975, 2654
TaiI	ACGT	3 cut(s)	99, 1392, 1413
TaqI	TCGA	5 cut(s)	143, 153, 664, 812, 1759
TaqII	GACCGA	1 cut(s)	139
TatI	WGTACW	2 cut(s)	138, 1903
TauI	GCSGC	1 cut(s)	257
TfiI	GAWTC	6 cut(s)	7, 809, 1613, 2072, 2420, 2539
TscAI	CASTG	3 cut(s)	96, 619, 1399
TseFI	GTSAC	2 cut(s)	1390, 1912
TseI	GCWGC	8 cut(s)	65, 68, 248, 251, 257, 1488, 2150, 2693
Tsp45I	GTSAC	2 cut(s)	1390, 1912
TspGWI	ACGGA	4 cut(s)	421, 1185, 2621, 2643
TspRI	CASTG	3 cut(s)	96, 619, 1399
Vha464I	CTTAAG	1 cut(s)	2081
VpaK11BI	GGWCC	7 cut(s)	122, 302, 1238, 1653, 1693, 2222, 2451
VspI	ATTAAT	2 cut(s)	1047, 1764
XapI	RAATTY	3 cut(s)	947, 2029, 2390
XbaI	TCTAGA	1 cut(s)	1342
XceI	RCATGY	1 cut(s)	2720
XcmI	CCANNNNNNNNNTGG	2 cut(s)	235, 2568
XhoI	CTCGAG	2 cut(s)	142, 663
XmaJI	CCTAGG	1 cut(s)	298
XmiI	GTMKAC	3 cut(s)	111, 513, 2210
XmnI	GAANNNNTTC	2 cut(s)	1338, 2673
XspI	CTAG	9 cut(s)	180, 201, 299, 608, 902, 1343, 1932, 1937, 2520
ZraI	GACGTC	1 cut(s)	1390
Zsp2I	ATGCAT	2 cut(s)	1036, 2718

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.