Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0000051

Physical Location & Seq

Genomic Coordinates Reverse (-)

66669093 .. 66672514

Gene Structure 3422 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G043290.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2514 bp

ATGTTTAGTGTATTCCTGGCCATGGCACAGAAGAAAACAACACCAGTAAATGTGGGTGTGATTCTTGAGTTGGATACATGGTTTGGGAAAATGGGGCTCAGCTGCATCAACATGGCTCTCTCTGACTTCTATGCCATTCATCCTTACTACAATACTAGGATGGTTCTACACACAAGAGACTCCCGGAAAGAAATTGTAGTTGCAGCTGGTGCAGCTCTAGATTTAATAAATAATGTTGAAGTGCAAGCCATCATTGGGCCGGAATCATCTATGAAAGCCAAATTTGTTACTGACCTTGGAGATAAAGCTCAGGTGCCTATAATCTCATTTTCAGCAACAAGCCCTTCCCTTCGGAATTCATATTTTTTCCGAATTGCACAAAGTGACTCATCTCAAGTGAAAGCCATAAGTTCCATCATCCAAGCGTTTGGTTGGAATGAAGCAGTGCCGATCAGCGTGGATGATGACTTTGGTGAGGGAATGATACCTTACTTGACTACCACTTTGCAAGCGGTTGGTGCTGGTATCCCTTACTGGAGTATCATTCCTCCAATGGCCACTAATGACCAAATTGGTGCTGAGCTTTACAAGTTGATGACAATGCAAACCAGGGTCTTCATAGTGCACATGGCTCCTTCTCTTGGCTCTCGGCTTTTTGCCAAGGCAAAAGAGCTTGGAATGATGAGTGAAGGCTATGTTTGGATAATGACAAATGGAATGACTAACTATTTCAGTTCCTTAAATTCTTCTGTCATAGATACCATGCAAGGGGTGTTGGGCCTGAAGACTTATGTTCCAGTCACAGAAGAGCTTGACAATTTTAGAGGTAGATGGCAAAGGAAATTCCAACAAGAAAATCCAAACCTTCTTAATGTTAAATTGGATGTCTTTGGACTGTGGGCTCATGATGCTGCCTGGACACTGGCCATGGCAACTGAGAAGGTTGGGAGTACAAACTTCAGCTTTCAAAACATTAACATTTCTGGTAGTTCCAGGGATATAGAAAGACTTGGGATTTCTCACAGTGGTCCTGAACTTAGAGGCCTTTCAGGAGATTTCAGTCTTATCAATGGTCAACTACAATCATCAAATTTTCAGGTAGTTAATGTGAATGATGGTGGGGAAAGAGAGATTGGATATTGGACACCTCGAAATGGACTTGGTTGGCAGATTCCTATGAGGGGGAGAAAATTGAGAATTTTAGTTCTGGTGAAGTGCGGATTTAAAGAATTTGTAAATGTGACACATGATCCTACCACGAACAGAACCAATGTCACTGGATACTGCATAGATGTCTTTCACGCTGTAATAGAAGCATTACCATATGATGTTCCGTACGAATTTTTTGCCTTTGCAAAGCCTGAAAGTTACGATGACTTGGTCAATCAAGTGTTTCTTGGGAACTACGATGCTGCAGTAGGAGATATAACCATTATAGCAAATAGATCATTGTATGTCAACTTCACATTGCCATACACAGAATCTGGGATATCAATGGTTGTGCCTATCAAAGACGACAACAATTCTAAAAATACTTGGGTGTTCTTAAAGCCTTTGACCTGGGACCTTTGGGTAGCATTCGGTTGTTTTTTCATATTCATTGGTTTTGTGGTCTGGGTTCTTGAACATCGGATTAACAAAGATTTCCTGGGATCTCCAAATCAGCAAATCAGCACAAGCTTTTGGTTCGGCCTCTCAACCATGGTTTTTGCCCACCGGGAGCTAGTAGTGAGCAGCTTGGCTCGGTTTGTAGTAATTGTATGGTGCTTTGTTGTCCTCATAATGACACAGAGTTATGCTGCCAGTTTAGCAACATTTTTAACAGTTCAACAGCTCCAACCAACTGTTACAGATGTAAACCTGCTCATAAAGAACGGGGACAGTGTTGGTTACCGAACAGGTTCTTCCCTTTATGGTGCATTGAAGCAATTAGGATTCCAGGACGAAAACATTAAGACCTACAATTCAGCAGAAGAATTGGATGAACTTTTCCAAAATGGAAATCATGGTATTTCTGCTGCTTTTGATGATGCCCCCTGCATGAGACTTTTTGTTGCAACTTACTGCTCGAATTATACCATGATTGGGCCAACATTTAAATCTGATGGTTTTGCCTTTATCTTCCAAAAAGGTTCACTTCTCACTCTTGATTTTTCAAGGGCAATCACTCTTGTGCAGGAGGGAGTTGATATGAGGCATATTGACAACAAGTGGTTCAGGAAGAAAGCAAGGTTGCTTCATCGTTACATTGATCCTGAAATCTCGTTTTGGAGAAGAATTCTTGTCATATTGAGAGTGAATGACCAAAAAGACCTCAGTTCGAAGGCTTATAAGGGAAGCAGACTGCAAGAGCGAGACCGTGTTCATGGTATAGGTGTCGTTGAATCCTCACCCAACATCAGCAGTCCCGAGAGCACATCATGCGATTCCAATGACATAGAATCACAAATTATTCTTACTGACACTGAGCATGGTGATTTGAATCCCAATAGTCGAAGCAACCCAAGAGGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0007154 GO:0007165 GO:0008066 GO:0008150 GO:0008324 GO:0009719 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0043200 GO:0044464 GO:0046873 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

837

Amino Acids

93.74

Weight (kDa)

5.85

Isoelectric Point (pI)

32.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peripla_BP_6	PF13458	15 - 318	7.7e-17	Periplasmic binding protein
ANF_receptor	PF01094	35 - 372	2.2e-72	Receptor family ligand binding region
Lig_chan-Glu_bd	PF10613	411 - 502	7.8e-09	Ligated ion channel L-glutamate- and glycine-binding site
SBP_bac_3	PF00497	421 - 740	6.6e-08	Bacterial extracellular solute-binding proteins, family 3
Lig_chan	PF00060	520 - 687	5.7e-31	Ligand-gated ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000051)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca	FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica	MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica	Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis	pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis	RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata	RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora	Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii	Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa	Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha	Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana	Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2331
Acc36I	ACCTGC	1 cut(s)	1869
AccB1I	GGYRCC	1 cut(s)	313
AciI	CCGC	2 cut(s)	512, 1218
AclWI	GGATC	3 cut(s)	1244, 1660, 2246
AcoI	YGGCCR	3 cut(s)	18, 555, 924
AcsI	RAATTY	9 cut(s)	281, 355, 742, 842, 1090, 1197, 1229, 1340, 2277
AcuI	CTGAAG	2 cut(s)	803, 943
AdeI	CACNNNGTG	1 cut(s)	383
AfaI	GTAC	2 cut(s)	952, 1337
AfiI	CCNNNNNNNGG	7 cut(s)	22, 255, 641, 768, 1154, 1181, 2085
AgsI	TTSAA	8 cut(s)	239, 968, 1625, 1829, 1924, 2157, 2384, 2482
AjnI	CCWGG	7 cut(s)	15, 608, 914, 992, 1559, 1647, 1938
AjuI	GAANNNNNNNTTGG	2 cut(s)	1116, 1148
AleI	CACNNNNGTG	1 cut(s)	2171
Alw21I	GWGCWC	2 cut(s)	627, 2417
Alw26I	GTCTC	3 cut(s)	171, 2038, 2349
Alw44I	GTGCAC	1 cut(s)	623
AlwI	GGATC	3 cut(s)	1244, 1660, 2246
AlwNI	CAGNNNCTG	1 cut(s)	1484
Ama87I	CYCGRG	1 cut(s)	2408
AoxI	GGCC	8 cut(s)	18, 257, 555, 778, 924, 1042, 1690, 2087
ApaLI	GTGCAC	1 cut(s)	623
ApeKI	GCWGC	8 cut(s)	102, 203, 212, 911, 1412, 1734, 1799, 2018
ApoI	RAATTY	9 cut(s)	281, 355, 742, 842, 1090, 1197, 1229, 1340, 2277
ArsI	GACNNNNNNTTYG	2 cut(s)	487, 519
Asp700I	GAANNNNTTC	1 cut(s)	1900
AspS9I	GGNCC	5 cut(s)	257, 778, 1028, 1564, 2087
AsuC2I	CCSGG	2 cut(s)	184, 1718
AsuHPI	GGTGA	4 cut(s)	485, 1222, 2382, 2486
AsuII	TTCGAA	1 cut(s)	2321
AvaI	CYCGRG	1 cut(s)	2408
AvaII	GGWCC	2 cut(s)	1028, 1564
BaeGI	GKGCMC	1 cut(s)	627
BaeI	ACNNNNGTAYC	2 cut(s)	523, 556
BalI	TGGCCA	3 cut(s)	20, 557, 926
BanI	GGYRCC	1 cut(s)	313
BanII	GRGCYC	2 cut(s)	99, 904
BarI	GAAGNNNNNNTAC	2 cut(s)	1445, 1477
BbsI	GAAGAC	2 cut(s)	607, 791
Bbv12I	GWGCWC	2 cut(s)	627, 2417
BbvI	GCAGC	8 cut(s)	89, 215, 224, 898, 1399, 1746, 1786, 2005
BccI	CCATC	6 cut(s)	154, 257, 422, 825, 1109, 2099
BcgI	CGANNNNNNTGC	2 cut(s)	1328, 1362
BciT130I	CCWGG	7 cut(s)	17, 610, 916, 994, 1561, 1649, 1940
BciVI	GTATCC	3 cut(s)	67, 536, 1274
BcnI	CCSGG	2 cut(s)	184, 1718
BcoDI	GTCTC	3 cut(s)	171, 2038, 2349
BfaI	CTAG	3 cut(s)	156, 218, 1724
BfmI	CTRYAG	1 cut(s)	1413
BfuAI	ACCTGC	1 cut(s)	1869
BfuI	GTATCC	3 cut(s)	67, 536, 1274
BisI	GCNGC	8 cut(s)	103, 204, 213, 912, 1413, 1735, 1800, 2019
BlpI	GCTNAGC	2 cut(s)	98, 579
BlsI	GCNGC	8 cut(s)	104, 205, 214, 913, 1414, 1736, 1801, 2020
Bme1390I	CCNGG	9 cut(s)	17, 184, 610, 916, 994, 1561, 1649, 1718, 1940
Bme18I	GGWCC	2 cut(s)	1028, 1564
BmeT110I	CYCGRG	1 cut(s)	2408
BmgT120I	GGNCC	5 cut(s)	257, 778, 1028, 1564, 2087
BmiI	GGNNCC	3 cut(s)	315, 633, 1565
BmrFI	CCNGG	9 cut(s)	17, 184, 610, 916, 994, 1561, 1649, 1718, 1940
BmsI	GCATC	4 cut(s)	114, 898, 1399, 2020
BpiI	GAAGAC	2 cut(s)	607, 791
BpmI	CTGGAG	1 cut(s)	556
Bpu10I	CCTNAGC	1 cut(s)	309
Bpu1102I	GCTNAGC	2 cut(s)	98, 579
Bpu14I	TTCGAA	1 cut(s)	2321
BpuEI	CTTGAG	2 cut(s)	86, 378
BpuMI	CCSGG	2 cut(s)	184, 1718
BsaBI	GATNNNNATC	1 cut(s)	2481
BsaI	GGTCTC	1 cut(s)	2349
BsaJI	CCNNGG	9 cut(s)	21, 295, 609, 660, 927, 993, 1560, 1648, 1701
Bsc4I	CCNNNNNNNGG	7 cut(s)	22, 255, 641, 768, 1154, 1181, 2085
Bse1I	ACTGG	6 cut(s)	44, 539, 797, 927, 1282, 1803
Bse3DI	GCAATG	1 cut(s)	1466
Bse8I	GATNNNNATC	1 cut(s)	2481
BseBI	CCWGG	7 cut(s)	17, 610, 916, 994, 1561, 1649, 1940
BseDI	CCNNGG	9 cut(s)	21, 295, 609, 660, 927, 993, 1560, 1648, 1701
BseGI	GGATG	6 cut(s)	139, 165, 417, 466, 889, 1987
BseJI	GATNNNNATC	1 cut(s)	2481
BseLI	CCNNNNNNNGG	7 cut(s)	22, 255, 641, 768, 1154, 1181, 2085
BseMI	GCAATG	1 cut(s)	1466
BseMII	CTCAG	6 cut(s)	112, 323, 570, 927, 2329, 2457
BseNI	ACTGG	6 cut(s)	44, 539, 797, 927, 1282, 1803
BseSI	GKGCMC	1 cut(s)	627
BseXI	GCAGC	8 cut(s)	89, 215, 224, 898, 1399, 1746, 1786, 2005
BsgI	GTGCAG	2 cut(s)	231, 2195
BshFI	GGCC	8 cut(s)	20, 259, 557, 780, 926, 1044, 1692, 2089
BshNI	GGYRCC	1 cut(s)	313
BsiHKAI	GWGCWC	2 cut(s)	627, 2417
BsiHKCI	CYCGRG	1 cut(s)	2408
BsiSI	CCGG	3 cut(s)	184, 260, 1717
BsiWI	CGTACG	1 cut(s)	1335
BslFI	GGGAC	3 cut(s)	1577, 1892, 2391
BslI	CCNNNNNNNGG	7 cut(s)	22, 255, 641, 768, 1154, 1181, 2085
BsmAI	GTCTC	3 cut(s)	171, 2038, 2349
BsmFI	GGGAC	3 cut(s)	1577, 1892, 2391
BsmI	GAATGC	1 cut(s)	1577
BsnI	GGCC	8 cut(s)	20, 259, 557, 780, 926, 1044, 1692, 2089
Bso31I	GGTCTC	1 cut(s)	2349
BsoBI	CYCGRG	1 cut(s)	2408
Bsp119I	TTCGAA	1 cut(s)	2321
Bsp1286I	GDGCHC	4 cut(s)	99, 627, 904, 2417
Bsp143I	GATC	5 cut(s)	450, 1249, 1445, 1652, 2251
Bsp1720I	GCTNAGC	2 cut(s)	98, 579
Bsp19I	CCATGG	3 cut(s)	21, 927, 1701
BspACI	CCGC	2 cut(s)	512, 1218
BspANI	GGCC	8 cut(s)	20, 259, 557, 780, 926, 1044, 1692, 2089
BspCNI	CTCAG	6 cut(s)	111, 322, 571, 928, 2328, 2458
BspHI	TCATGA	1 cut(s)	904
BspLI	GGNNCC	3 cut(s)	315, 633, 1565
BspMAI	CTGCAG	1 cut(s)	1417
BspMI	ACCTGC	1 cut(s)	1869
BspPI	GGATC	3 cut(s)	1244, 1660, 2246
BspQI	GCTCTTC	1 cut(s)	801
BspT104I	TTCGAA	1 cut(s)	2321
BspT107I	GGYRCC	1 cut(s)	313
BspTNI	GGTCTC	1 cut(s)	2349
BsrDI	GCAATG	1 cut(s)	1466
BsrI	ACTGG	6 cut(s)	44, 539, 797, 927, 1282, 1803
BssECI	CCNNGG	9 cut(s)	21, 295, 609, 660, 927, 993, 1560, 1648, 1701
BssMI	GATC	5 cut(s)	450, 1249, 1445, 1652, 2251
BssT1I	CCWWGG	5 cut(s)	21, 295, 660, 927, 1701
Bst2UI	CCWGG	7 cut(s)	17, 610, 916, 994, 1561, 1649, 1940
Bst4CI	ACNGT	6 cut(s)	897, 1025, 1825, 1846, 1883, 2360
Bst6I	CTCTTC	1 cut(s)	801
BstAPI	GCANNNNNTGC	2 cut(s)	209, 2421
BstBI	TTCGAA	1 cut(s)	2321
BstC8I	GCNNGC	2 cut(s)	246, 510
BstDEI	CTNAG	7 cut(s)	98, 309, 579, 936, 1037, 2315, 2466
BstDSI	CCRYGG	3 cut(s)	21, 927, 1701
BstEII	GGTNACC	1 cut(s)	1889
BstF5I	GGATG	6 cut(s)	139, 165, 417, 466, 889, 1987
BstKTI	GATC	5 cut(s)	453, 1252, 1448, 1655, 2254
BstMAI	GTCTC	3 cut(s)	171, 2038, 2349
BstMBI	GATC	5 cut(s)	450, 1249, 1445, 1652, 2251
BstMWI	GCNNNNNNNGC	6 cut(s)	209, 212, 518, 908, 1808, 2421
BstNI	CCWGG	7 cut(s)	17, 610, 916, 994, 1561, 1649, 1940
BstPI	GGTNACC	1 cut(s)	1889
BstSCI	CCNGG	9 cut(s)	15, 182, 608, 914, 992, 1559, 1647, 1716, 1938
BstSFI	CTRYAG	1 cut(s)	1413
BstSLI	GKGCMC	1 cut(s)	627
BstV1I	GCAGC	8 cut(s)	89, 215, 224, 898, 1399, 1746, 1786, 2005
BstV2I	GAAGAC	2 cut(s)	607, 791
BstX2I	RGATCY	1 cut(s)	1652
BstXI	CCANNNNNNTGG	1 cut(s)	428
BstYI	RGATCY	1 cut(s)	1652
BsuI	GTATCC	3 cut(s)	67, 536, 1274
BsuRI	GGCC	8 cut(s)	20, 259, 557, 780, 926, 1044, 1692, 2089
BtgI	CCRYGG	3 cut(s)	21, 927, 1701
BtsCI	GGATG	6 cut(s)	139, 165, 417, 466, 889, 1987
BtsI	GCAGTG	1 cut(s)	450
BtsIMutI	CAGTG	6 cut(s)	450, 920, 1030, 1275, 1888, 2463
BveI	ACCTGC	1 cut(s)	1869
Cac8I	GCNNGC	2 cut(s)	246, 510
CaiI	CAGNNNCTG	1 cut(s)	1484
CciI	TCATGA	1 cut(s)	904
Cfr13I	GGNCC	5 cut(s)	257, 778, 1028, 1564, 2087
Csp6I	GTAC	2 cut(s)	951, 1336
CviQI	GTAC	2 cut(s)	951, 1336
DdeI	CTNAG	7 cut(s)	98, 309, 579, 936, 1037, 2315, 2466
DpnI	GATC	5 cut(s)	452, 1251, 1447, 1654, 2253
DpnII	GATC	5 cut(s)	450, 1249, 1445, 1652, 2251
DraI	TTTAAA	2 cut(s)	1225, 2098
DraIII	CACNNNGTG	1 cut(s)	383
EaeI	YGGCCR	3 cut(s)	18, 555, 924
Eam1104I	CTCTTC	1 cut(s)	801
EarI	CTCTTC	1 cut(s)	801
Eco130I	CCWWGG	5 cut(s)	21, 295, 660, 927, 1701
Eco147I	AGGCCT	1 cut(s)	1044
Eco24I	GRGCYC	2 cut(s)	99, 904
Eco31I	GGTCTC	1 cut(s)	2349
Eco32I	GATATC	1 cut(s)	1491
Eco47I	GGWCC	2 cut(s)	1028, 1564
Eco57I	CTGAAG	2 cut(s)	803, 943
Eco88I	CYCGRG	1 cut(s)	2408
Eco91I	GGTNACC	1 cut(s)	1889
EcoO109I	RGGNCCY	1 cut(s)	1564
EcoO65I	GGTNACC	1 cut(s)	1889
EcoRI	GAATTC	2 cut(s)	355, 2277
EcoRII	CCWGG	7 cut(s)	15, 608, 914, 992, 1559, 1647, 1938
EcoRV	GATATC	1 cut(s)	1491
EcoT14I	CCWWGG	5 cut(s)	21, 295, 660, 927, 1701
EcoT38I	GRGCYC	2 cut(s)	99, 904
ErhI	CCWWGG	5 cut(s)	21, 295, 660, 927, 1701
FalI	AAGNNNNNCTT	4 cut(s)	1380, 1412, 2121, 2153
FaqI	GGGAC	3 cut(s)	1577, 1892, 2391
FauNDI	CATATG	1 cut(s)	1324
Fnu4HI	GCNGC	8 cut(s)	103, 204, 213, 912, 1413, 1735, 1800, 2019
FokI	GGATG	6 cut(s)	126, 172, 404, 473, 896, 1994
FriOI	GRGCYC	2 cut(s)	99, 904
Fsp4HI	GCNGC	8 cut(s)	103, 204, 213, 912, 1413, 1735, 1800, 2019
FspBI	CTAG	3 cut(s)	156, 218, 1724
GluI	GCNGC	8 cut(s)	103, 204, 213, 912, 1413, 1735, 1800, 2019
GsuI	CTGGAG	1 cut(s)	556
HaeIII	GGCC	8 cut(s)	20, 259, 557, 780, 926, 1044, 1692, 2089
HapII	CCGG	3 cut(s)	184, 260, 1717
HincII	GTYRAC	2 cut(s)	1076, 1459
HindII	GTYRAC	2 cut(s)	1076, 1459
HindIII	AAGCTT	1 cut(s)	1678
HpaII	CCGG	3 cut(s)	184, 260, 1717
HphI	GGTGA	4 cut(s)	485, 1222, 2382, 2486
Hpy166II	GTNNAC	5 cut(s)	625, 1076, 1459, 1858, 2135
Hpy188I	TCNGA	5 cut(s)	124, 354, 371, 1632, 2104
Hpy8I	GTNNAC	5 cut(s)	625, 1076, 1459, 1858, 2135
HpyAV	CCTTC	7 cut(s)	354, 359, 645, 683, 875, 934, 2317
HpyCH4III	ACNGT	6 cut(s)	897, 1025, 1825, 1846, 1883, 2360
HpyF10VI	GCNNNNNNNGC	6 cut(s)	209, 212, 518, 908, 1808, 2421
HpyF3I	CTNAG	7 cut(s)	98, 309, 579, 936, 1037, 2315, 2466
Kzo9I	GATC	5 cut(s)	450, 1249, 1445, 1652, 2251
LguI	GCTCTTC	1 cut(s)	801
LmnI	GCTCC	3 cut(s)	637, 1720, 1839
Lsp1109I	GCAGC	8 cut(s)	89, 215, 224, 898, 1399, 1746, 1786, 2005
LweI	GCATC	4 cut(s)	114, 898, 1399, 2020
MaeI	CTAG	3 cut(s)	156, 218, 1724
MaeIII	GTNAC	9 cut(s)	286, 383, 799, 1240, 1273, 1367, 1846, 1889, 2243
MalI	GATC	5 cut(s)	452, 1251, 1447, 1654, 2253
MboI	GATC	5 cut(s)	450, 1249, 1445, 1652, 2251
MflI	RGATCY	1 cut(s)	1652
MhlI	GDGCHC	4 cut(s)	99, 627, 904, 2417
MlsI	TGGCCA	3 cut(s)	20, 557, 926
MluNI	TGGCCA	3 cut(s)	20, 557, 926
MlyI	GAGTC	2 cut(s)	173, 380
MmeI	TCCRAC	4 cut(s)	51, 413, 871, 1861
Mox20I	TGGCCA	3 cut(s)	20, 557, 926
MroXI	GAANNNNTTC	1 cut(s)	1900
MscI	TGGCCA	3 cut(s)	20, 557, 926
MslI	CAYNNNNRTG	2 cut(s)	110, 2171
Msp20I	TGGCCA	3 cut(s)	20, 557, 926
MspA1I	CMGCKG	2 cut(s)	102, 206
MspI	CCGG	3 cut(s)	184, 260, 1717
MspR9I	CCNGG	9 cut(s)	17, 184, 610, 916, 994, 1561, 1649, 1718, 1940
Mva1269I	GAATGC	1 cut(s)	1577
MvaI	CCWGG	7 cut(s)	17, 610, 916, 994, 1561, 1649, 1940
MwoI	GCNNNNNNNGC	6 cut(s)	209, 212, 518, 908, 1808, 2421
NciI	CCSGG	2 cut(s)	184, 1718
NcoI	CCATGG	3 cut(s)	21, 927, 1701
NdeI	CATATG	1 cut(s)	1324
NdeII	GATC	5 cut(s)	450, 1249, 1445, 1652, 2251
NlaIV	GGNNCC	3 cut(s)	315, 633, 1565
NmeAIII	GCCGAG	1 cut(s)	628
NmuCI	GTSAC	4 cut(s)	383, 799, 1240, 1273
NspV	TTCGAA	1 cut(s)	2321
OliI	CACNNNNGTG	1 cut(s)	2171
PagI	TCATGA	1 cut(s)	904
PceI	AGGCCT	1 cut(s)	1044
PciSI	GCTCTTC	1 cut(s)	801
PctI	GAATGC	1 cut(s)	1577
PdmI	GAANNNNTTC	1 cut(s)	1900
PfeI	GAWTC	9 cut(s)	61, 263, 1171, 1481, 1935, 2384, 2426, 2441, 2482
Pfl23II	CGTACG	1 cut(s)	1335
PflFI	GACNNNGTC	1 cut(s)	1379
PfoI	TCCNGGA	2 cut(s)	182, 1938
PkrI	GCNGC	8 cut(s)	104, 205, 214, 913, 1414, 1736, 1801, 2020
PleI	GAGTC	2 cut(s)	173, 380
PpsI	GAGTC	2 cut(s)	173, 380
PpuMI	RGGWCCY	1 cut(s)	1564
PsiI	TTATAA	1 cut(s)	2331
Psp5II	RGGWCCY	1 cut(s)	1564
Psp6I	CCWGG	7 cut(s)	15, 608, 914, 992, 1559, 1647, 1938
PspEI	GGTNACC	1 cut(s)	1889
PspGI	CCWGG	7 cut(s)	15, 608, 914, 992, 1559, 1647, 1938
PspLI	CGTACG	1 cut(s)	1335
PspN4I	GGNNCC	3 cut(s)	315, 633, 1565
PspPI	GGNCC	5 cut(s)	257, 778, 1028, 1564, 2087
PspPPI	RGGWCCY	1 cut(s)	1564
PstI	CTGCAG	1 cut(s)	1417
PstNI	CAGNNNCTG	1 cut(s)	1484
PsuI	RGATCY	1 cut(s)	1652
PsyI	GACNNNGTC	1 cut(s)	1379
PvuII	CAGCTG	2 cut(s)	102, 206
RsaI	GTAC	2 cut(s)	952, 1337
RsaNI	GTAC	2 cut(s)	951, 1336
RseI	CAYNNNNRTG	2 cut(s)	110, 2171
SapI	GCTCTTC	1 cut(s)	801
SatI	GCNGC	8 cut(s)	103, 204, 213, 912, 1413, 1735, 1800, 2019
Sau3AI	GATC	5 cut(s)	450, 1249, 1445, 1652, 2251
Sau96I	GGNCC	5 cut(s)	257, 778, 1028, 1564, 2087
SchI	GAGTC	2 cut(s)	173, 380
ScrFI	CCNGG	9 cut(s)	17, 184, 610, 916, 994, 1561, 1649, 1718, 1940
SduI	GDGCHC	4 cut(s)	99, 627, 904, 2417
SfaNI	GCATC	4 cut(s)	114, 898, 1399, 2020
SfcI	CTRYAG	1 cut(s)	1413
SfuI	TTCGAA	1 cut(s)	2321
SinI	GGWCC	2 cut(s)	1028, 1564
SmiI	ATTTAAAT	1 cut(s)	2098
SmiMI	CAYNNNNRTG	2 cut(s)	110, 2171
SmlI	CTYRAG	2 cut(s)	65, 393
SmoI	CTYRAG	2 cut(s)	65, 393
SseBI	AGGCCT	1 cut(s)	1044
SsiI	CCGC	2 cut(s)	512, 1218
SspMI	CTAG	3 cut(s)	156, 218, 1724
StuI	AGGCCT	1 cut(s)	1044
StyD4I	CCNGG	9 cut(s)	15, 182, 608, 914, 992, 1559, 1647, 1716, 1938
StyI	CCWWGG	5 cut(s)	21, 295, 660, 927, 1701
SwaI	ATTTAAAT	1 cut(s)	2098
TaaI	ACNGT	6 cut(s)	897, 1025, 1825, 1846, 1883, 2360
TaqI	TCGA	4 cut(s)	1150, 2069, 2321, 2494
TatI	WGTACW	1 cut(s)	950
TfiI	GAWTC	9 cut(s)	61, 263, 1171, 1481, 1935, 2384, 2426, 2441, 2482
TscAI	CASTG	6 cut(s)	450, 927, 1030, 1282, 1888, 2470
TseFI	GTSAC	4 cut(s)	383, 799, 1240, 1273
TseI	GCWGC	8 cut(s)	102, 203, 212, 911, 1412, 1734, 1799, 2018
Tsp45I	GTSAC	4 cut(s)	383, 799, 1240, 1273
TspGWI	ACGGA	1 cut(s)	1323
TspRI	CASTG	6 cut(s)	450, 927, 1030, 1282, 1888, 2470
Tth111I	GACNNNGTC	1 cut(s)	1379
VneI	GTGCAC	1 cut(s)	623
VpaK11BI	GGWCC	2 cut(s)	1028, 1564
XapI	RAATTY	9 cut(s)	281, 355, 742, 842, 1090, 1197, 1229, 1340, 2277
XbaI	TCTAGA	1 cut(s)	217
XmnI	GAANNNNTTC	1 cut(s)	1900
XspI	CTAG	3 cut(s)	156, 218, 1724

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.