FvH4_2g11260

Glutamate receptor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0000051
Physical Location & Seq
Forward (+)
9787906 .. 9791847
3942 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g11260.t1

Sequence Viewer

Length: 2847 bp
ATGGAGAACAAGAAACCGTCAAAACCTGTTTGTTCTTACTTTTTGATTTTTTGTTCAAGTATTTCCTTGGTCGTAGCCATGGGAGAGAACACAAGCATCACGGTGAATGTGGGTGTGGTTCTTGACCTTGATAATTCACTCAGTACAAAAGTTTGGTTGAGCTGCATTAAGATGGCGATTTCGGACTTCTATACTTCTCATGCTCTGTCTGAGAGCAGAGTGGCTTTGAACATCAAGGATTCCAGAAGTGAAGTTGTTGATGCCGCTGCAGCAGCTTTGGACCTGATAAAGAATGTGCATGTGGAAGCAATAATAGGACCAAAATCATCAATGCAAGCCAACTTTGTAATTGATCTTGGAGAAAAAGCTCAGGTGCCTATAATCTCATTTTCAGCAACAAGTCCTTCCCTTGCCTCCCTTCAAAGTTTGTATTTTTTCCGAGCTGCACAAAATGATTCCTCCCAAGTCAAAGCCATTAGTGCAATTATCAAAGCTTTTGGATGGAGAGTAGCTATACCCATCTATGTCGAAAATGCTTACGGTGAGGGGGTGCTACCATCCTTAGTGGATGCCTTGCAAGACGTTCGAGTCCGTGTCCCTTACAGAAGTGCCATACCTCCTACAGCCACAGATGACCAGCTTGCTGAGGAGCTTTACAAGTTGATGACCATGCAAACTAGAGTCTTCATTGTGCATATGTCCCCCTCGCTTGGGTCTCGGCTTTTCGCCAAAGCAGATGAGATAGGGATGATGAATGAAGGCTACGTCTGGATCATGACCAATGGGTTAACTAATTACTTGAGTTCAACTAATGCTTCCATTATCAATTCCATGCAAGGGGCACTGGGTGTGAGGACTTACGTGCCAAAGACTCAAGAGCTTATTGATTTTAGAAGTCGTTGGAAAAGGCAATTCCAACATGAAAATCCAACCGTCATTGATGTTGAGTTGGATGTGTTTGGTCTCTGGGCTTATGATGCTGCTTACGCATTAGCCATGGCAGTTGAGAATGTCGGCACTACCAGTTCACTCTCTGGCTCCCAAACCACAAATGCTTCCATTAACTCATCATCAACAGATCTAAAAACTCTCAGGGTCTCTCCGAGAGGTCGTGAACTTTCTCAATCCTTATCAGGTACTAGGTTTAGAGGCCTTGCGGGAGATTTCAGTTTCTCCAATGGGCAGTTGCAATCTTCGGTGTTTGAAATAGTGAATGTGAATGGTGAAGGAGCAAGAGAAATTGGGTTTTGGTCACCACAGTTTGGACTCGCGAAATATATGAGCAATTCAACAAATGCAAACAGCTCATACTCAACTTCTAGATCTGACATGGGACCGATACTATGGCCAGGAGATTCTACCTCAACTCCAAAGGGATGGGAAGTTCCCACAAACAACAGAAGGTTGAGAGTAGGCGTTCCTGTGAAAGTTGGTTCCCCTGAGTTTGTGAAGGTGGTGCATGATCCTGTCACTAATAGAATAGATGTCACTGGGTTCTGCATTGACATGTTCAGGGCTGTAATGGAAGGGTTACCTTACGCTGTTACATATGACTTCATTCCCTTTGCAAAGCCGGATGGCACTAGTGCTGGCACTTACAATGACATGGTCCATCAAGTTTTTCTTAGGAATTTCGATGCTTTGGCAGCAGCTACAACAATTAGAGCAAACAGATCTTTGTATGTGGACTTCACATTGCCATACACAGATTCAGGTGTAGTAATGGTAGTGCCCATGATAGACAGCAAGAGCAGAAACGCATGGATTTTTCTGAAGCCTTTGACATGGGACCTCTGGCTTACAACTTCTTGCTCTTTCATCTTCATTGGTTTTGTTATTTGGGTTCTTGAACACCGCATTAATGAAGATTTTCGTGGACCTCCCTCACACCAAGTTGGCACAAGCATCTGGTTTTCTTTCTCAACTATGGTTTTTGCACAGCGGGAACAGGTTGTGAGTAACTTGGGCAGATTTGTGGTGATAGTGTGGGTATTTGTGGTGCTGATACTGACGCAGAGTTACACAGCTAGTCTGACTTCGTTATTAACCATCAAACAACTGCAGCCAACTTGTACAGATATAAACCAGCTTTTGAAAAATAAGGAGTCTGTTGGATACCCCGAGGGTTCTTTTGTCTACGATCTTTTGATAGAGAAAGGTTTTGATCGTTCTAGGATTAAGGCTTATACATCACCAGATGAATGTGACCAACTTTTGAAAAATGGAAGCGCCAAAGGTGGTATTGCGGCTGCTATAGATGAGACGCCAAACTTGAAGCTTTTTCTTGCCAAGTACTGCACCAAATACACCATGGTTGGCCCAATTTTTAAAACCGATGGCTTTGCCTTTGTTTTCCCCAAAGGTTCGCCTCTCGTACCAGATGTTTCAAGGTCGATACTGAACGTCACTGAGGGAGACGAGATGAAGAACATCGAAAATAAATGGTTTGGAAAAAAGGCCACTTGTTCAGTTACCAACCCGATGTTCTCGGATTCCAGTAGTCTTGGGGTTGATAGTTTCTGGGGTCTCTTCCTCATTTCTGGGTTATCTTCATGTTTAGCTTTGATGGTATTTGCAACATCTTTCTTTTTAAGGCACAGACGCATCTTCATTACGATTCGGGGCTCCTCTATTTGCAGAAAAGTTGGAGTCATGCTTAGAGTCTTTGACGAGAAAGACATCACCTCCCATACTTTTAGAAACAAGAATTTAGGTCGTGTTGAACCCTCGGCCTCACCACCTTGCAGTATTTGCCTACCAAGTCCATCAAGCCAGCATTCAAACCATACAAATATACAAGACTCTCCCTTCTTCTGGGAAGAAAGAACAATTGTTGGTCAAATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

949

Amino Acids

104.78

Weight (kDa)

7.84

Isoelectric Point (pI)

41.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peripla_BP_6 PF13458 35 - 344 7.2e-18 Periplasmic binding protein
ANF_receptor PF01094 53 - 408 2.4e-88 Receptor family ligand binding region
Lig_chan-Glu_bd PF10613 487 - 577 7.1e-08 Ligated ion channel L-glutamate- and glycine-binding site
SBP_bac_3 PF00497 495 - 818 1.4e-08 Bacterial extracellular solute-binding proteins, family 3
Lig_chan PF00060 595 - 849 6.3e-38 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 587
AccB1I GGYRCC 1 cut(s) 373
AccB7I CCANNNNNTGG 1 cut(s) 1262
AccI GTMKAC 1 cut(s) 2136
AccII CGCG 1 cut(s) 1271
AciI CCGC 5 cut(s) 264, 1157, 1855, 1942, 2246
AclWI GGATC 2 cut(s) 779, 1457
AcoI YGGCCR 1 cut(s) 1346
AcsI RAATTY 2 cut(s) 1630, 2707
AcuI CTGAAG 1 cut(s) 1793
AcyI GRCGYC 1 cut(s) 2264
AdeI CACNNNGTG 1 cut(s) 848
AfaI GTAC 5 cut(s) 145, 1138, 2074, 2294, 2376
AfiI CCNNNNNNNGG 5 cut(s) 710, 711, 837, 1262, 2814
AflIII ACRYGT 1 cut(s) 1506
AhlI ACTAGT 1 cut(s) 1583
AjnI CCWGG 1 cut(s) 1348
AjuI GAANNNNNNNTTGG 2 cut(s) 2468, 2500
AloI GAACNNNNNNTCC 2 cut(s) 1368, 1400
Alw26I GTCTC 6 cut(s) 720, 968, 1102, 2255, 2409, 2531
AlwI GGATC 2 cut(s) 779, 1457
Ama87I CYCGRG 1 cut(s) 2120
AoxI GGCC 5 cut(s) 1150, 1346, 2317, 2457, 2730
ApoI RAATTY 2 cut(s) 1630, 2707
AseI ATTAAT 1 cut(s) 1860
Asp700I GAANNNNTTC 1 cut(s) 1869
AspLEI GCGC 1 cut(s) 2231
AspS9I GGNCC 7 cut(s) 280, 317, 1334, 1609, 1789, 1877, 2318
AsuHPI GGTGA 8 cut(s) 115, 554, 1235, 1245, 1990, 2184, 2674, 2727
AvaI CYCGRG 1 cut(s) 2120
AvaII GGWCC 6 cut(s) 280, 317, 1334, 1609, 1789, 1877
BaeGI GKGCMC 2 cut(s) 844, 1734
BalI TGGCCA 1 cut(s) 1348
BanI GGYRCC 1 cut(s) 373
BanII GRGCYC 1 cut(s) 2627
BarI GAAGNNNNNNTAC 2 cut(s) 1673, 1705
BbsI GAAGAC 1 cut(s) 676
BbvCI CCTCAGC 1 cut(s) 645
BcgI CGANNNNNNTGC 4 cut(s) 566, 600, 2324, 2358
BciT130I CCWGG 1 cut(s) 1350
BciVI GTATCC 1 cut(s) 2108
BcoDI GTCTC 6 cut(s) 720, 968, 1102, 2255, 2409, 2531
BcuI ACTAGT 1 cut(s) 1583
BfaI CTAG 6 cut(s) 678, 1140, 1320, 1584, 2028, 2172
BfmI CTRYAG 4 cut(s) 267, 621, 2060, 2253
BfoI RGCGCY 1 cut(s) 2232
BfuI GTATCC 1 cut(s) 2108
BglII AGATCT 3 cut(s) 1078, 1322, 1673
BmcAI AGTACT 1 cut(s) 2294
Bme1390I CCNGG 1 cut(s) 1350
Bme18I GGWCC 6 cut(s) 280, 317, 1334, 1609, 1789, 1877
BmeT110I CYCGRG 1 cut(s) 2120
BmgT120I GGNCC 7 cut(s) 280, 317, 1334, 1609, 1789, 1877, 2318
BmiI GGNNCC 6 cut(s) 375, 1039, 1335, 1435, 1790, 2626
BmrFI CCNGG 1 cut(s) 1350
BmrI ACTGGG 2 cut(s) 854, 1500
BmsI GCATC 7 cut(s) 105, 250, 559, 967, 1627, 1914, 2613
BmuI ACTGGG 2 cut(s) 854, 1500
BpiI GAAGAC 1 cut(s) 676
Bpu10I CCTNAGC 2 cut(s) 369, 645
BpuEI CTTGAG 2 cut(s) 820, 858
BsaAI YACGTR 1 cut(s) 862
BsaHI GRCGYC 1 cut(s) 2264
BsaI GGTCTC 4 cut(s) 720, 968, 1102, 2531
BsaJI CCNNGG 6 cut(s) 66, 78, 996, 2121, 2310, 2727
BsaXI ACNNNNNCTCC 4 cut(s) 1351, 1381, 2669, 2699
Bsc4I CCNNNNNNNGG 5 cut(s) 710, 711, 837, 1262, 2814
Bse1I ACTGG 4 cut(s) 849, 1023, 1495, 2496
Bse3DI GCAATG 1 cut(s) 1694
BseBI CCWGG 1 cut(s) 1350
BseDI CCNNGG 6 cut(s) 66, 78, 996, 2121, 2310, 2727
BseGI GGATG 7 cut(s) 506, 557, 574, 753, 958, 1382, 1582
BseLI CCNNNNNNNGG 5 cut(s) 710, 711, 837, 1262, 2814
BseMI GCAATG 1 cut(s) 1694
BseMII CTCAG 7 cut(s) 154, 201, 383, 636, 1105, 1431, 2400
BseNI ACTGG 4 cut(s) 849, 1023, 1495, 2496
BseRI GAGGAG 2 cut(s) 662, 2617
BseSI GKGCMC 2 cut(s) 844, 1734
BsgI GTGCAG 2 cut(s) 429, 2281
Bsh1236I CGCG 1 cut(s) 1271
BshFI GGCC 5 cut(s) 1152, 1348, 2319, 2459, 2732
BshNI GGYRCC 1 cut(s) 373
BsiHKCI CYCGRG 1 cut(s) 2120
BsiSI CCGG 1 cut(s) 1574
BslFI GGGAC 4 cut(s) 581, 685, 1347, 1802
BslI CCNNNNNNNGG 5 cut(s) 710, 711, 837, 1262, 2814
BsmAI GTCTC 6 cut(s) 720, 968, 1102, 2255, 2409, 2531
BsmBI CGTCTC 2 cut(s) 2255, 2409
BsmFI GGGAC 4 cut(s) 581, 685, 1347, 1802
BsmI GAATGC 1 cut(s) 2776
BsnI GGCC 5 cut(s) 1152, 1348, 2319, 2459, 2732
Bso31I GGTCTC 4 cut(s) 720, 968, 1102, 2531
BsoBI CYCGRG 1 cut(s) 2120
Bsp1286I GDGCHC 3 cut(s) 844, 1734, 2627
Bsp1407I TGTACA 1 cut(s) 2072
Bsp143I GATC 8 cut(s) 352, 771, 1078, 1322, 1462, 1673, 2140, 2164
Bsp19I CCATGG 3 cut(s) 78, 996, 2310
Bsp68I TCGCGA 1 cut(s) 1271
BspACI CCGC 5 cut(s) 264, 1157, 1855, 1942, 2246
BspANI GGCC 5 cut(s) 1152, 1348, 2319, 2459, 2732
BspCNI CTCAG 7 cut(s) 153, 202, 382, 637, 1104, 1432, 2401
BspFNI CGCG 1 cut(s) 1271
BspHI TCATGA 1 cut(s) 774
BspLI GGNNCC 6 cut(s) 375, 1039, 1335, 1435, 1790, 2626
BspMAI CTGCAG 2 cut(s) 271, 2064
BspPI GGATC 2 cut(s) 779, 1457
BspT107I GGYRCC 1 cut(s) 373
BspTNI GGTCTC 4 cut(s) 720, 968, 1102, 2531
BsrDI GCAATG 1 cut(s) 1694
BsrGI TGTACA 1 cut(s) 2072
BsrI ACTGG 4 cut(s) 849, 1023, 1495, 2496
BssECI CCNNGG 6 cut(s) 66, 78, 996, 2121, 2310, 2727
BssMI GATC 8 cut(s) 352, 771, 1078, 1322, 1462, 1673, 2140, 2164
BssNI GRCGYC 1 cut(s) 2264
BssT1I CCWWGG 4 cut(s) 66, 78, 996, 2310
Bst2UI CCWGG 1 cut(s) 1350
Bst4CI ACNGT 5 cut(s) 18, 103, 542, 934, 1260
Bst6I CTCTTC 1 cut(s) 2534
BstACI GRCGYC 1 cut(s) 2264
BstAPI GCANNNNNTGC 1 cut(s) 2751
BstAUI TGTACA 1 cut(s) 2072
BstBAI YACGTR 1 cut(s) 862
BstC8I GCNNGC 4 cut(s) 336, 642, 1591, 2774
BstDSI CCRYGG 3 cut(s) 78, 996, 2310
BstEII GGTNACC 2 cut(s) 1251, 1530
BstF5I GGATG 7 cut(s) 506, 557, 574, 753, 958, 1382, 1582
BstFNI CGCG 1 cut(s) 1271
BstH2I RGCGCY 1 cut(s) 2232
BstHHI GCGC 1 cut(s) 2231
BstKTI GATC 8 cut(s) 355, 774, 1081, 1325, 1465, 1676, 2143, 2167
BstMAI GTCTC 6 cut(s) 720, 968, 1102, 2255, 2409, 2531
BstMBI GATC 8 cut(s) 352, 771, 1078, 1322, 1462, 1673, 2140, 2164
BstMWI GCNNNNNNNGC 7 cut(s) 269, 272, 479, 977, 986, 1646, 2751
BstNI CCWGG 1 cut(s) 1350
BstNSI RCATGY 2 cut(s) 302, 1510
BstPI GGTNACC 2 cut(s) 1251, 1530
BstSCI CCNGG 1 cut(s) 1348
BstSFI CTRYAG 4 cut(s) 267, 621, 2060, 2253
BstSLI GKGCMC 2 cut(s) 844, 1734
BstUI CGCG 1 cut(s) 1271
BstV2I GAAGAC 1 cut(s) 676
BstX2I RGATCY 3 cut(s) 1078, 1322, 1673
BstXI CCANNNNNNTGG 1 cut(s) 1377
BstYI RGATCY 3 cut(s) 1078, 1322, 1673
BsuI GTATCC 1 cut(s) 2108
BsuRI GGCC 5 cut(s) 1152, 1348, 2319, 2459, 2732
BtgI CCRYGG 3 cut(s) 78, 996, 2310
BtsCI GGATG 7 cut(s) 506, 557, 574, 753, 958, 1382, 1582
BtsIMutI CAGTG 3 cut(s) 842, 1488, 2406
BtuMI TCGCGA 1 cut(s) 1271
Cac8I GCNNGC 4 cut(s) 336, 642, 1591, 2774
CciI TCATGA 1 cut(s) 774
CfoI GCGC 1 cut(s) 2231
Cfr13I GGNCC 7 cut(s) 280, 317, 1334, 1609, 1789, 1877, 2318
CseI GACGC 3 cut(s) 2020, 2272, 2610
Csp6I GTAC 5 cut(s) 144, 1137, 2073, 2293, 2375
CviQI GTAC 5 cut(s) 144, 1137, 2073, 2293, 2375
DpnI GATC 8 cut(s) 354, 773, 1080, 1324, 1464, 1675, 2142, 2166
DpnII GATC 8 cut(s) 352, 771, 1078, 1322, 1462, 1673, 2140, 2164
DraI TTTAAA 1 cut(s) 2329
DraIII CACNNNGTG 1 cut(s) 848
DrdI GACNNNNNNGTC 1 cut(s) 587
DseDI GACNNNNNNGTC 1 cut(s) 587
EaeI YGGCCR 1 cut(s) 1346
Eam1104I CTCTTC 1 cut(s) 2534
EarI CTCTTC 1 cut(s) 2534
Eco130I CCWWGG 4 cut(s) 66, 78, 996, 2310
Eco147I AGGCCT 1 cut(s) 1152
Eco24I GRGCYC 1 cut(s) 2627
Eco31I GGTCTC 4 cut(s) 720, 968, 1102, 2531
Eco47I GGWCC 6 cut(s) 280, 317, 1334, 1609, 1789, 1877
Eco57I CTGAAG 1 cut(s) 1793
Eco88I CYCGRG 1 cut(s) 2120
Eco91I GGTNACC 2 cut(s) 1251, 1530
EcoO109I RGGNCCY 1 cut(s) 1789
EcoO65I GGTNACC 2 cut(s) 1251, 1530
EcoRII CCWGG 1 cut(s) 1348
EcoT14I CCWWGG 4 cut(s) 66, 78, 996, 2310
EcoT38I GRGCYC 1 cut(s) 2627
ErhI CCWWGG 4 cut(s) 66, 78, 996, 2310
Esp3I CGTCTC 2 cut(s) 2255, 2409
FalI AAGNNNNNCTT 2 cut(s) 1608, 1640
FaqI GGGAC 4 cut(s) 581, 685, 1347, 1802
FauI CCCGC 2 cut(s) 1150, 1935
FauNDI CATATG 2 cut(s) 696, 1549
FblI GTMKAC 1 cut(s) 2136
FokI GGATG 7 cut(s) 513, 544, 581, 760, 965, 1389, 1589
FriOI GRGCYC 1 cut(s) 2627
FspBI CTAG 6 cut(s) 678, 1140, 1320, 1584, 2028, 2172
GlaI GCGC 1 cut(s) 2230
HaeII RGCGCY 1 cut(s) 2232
HaeIII GGCC 5 cut(s) 1152, 1348, 2319, 2459, 2732
HapII CCGG 1 cut(s) 1574
HgaI GACGC 3 cut(s) 2020, 2272, 2610
HhaI GCGC 1 cut(s) 2231
Hin1I GRCGYC 1 cut(s) 2264
Hin6I GCGC 1 cut(s) 2229
HinP1I GCGC 1 cut(s) 2229
HincII GTYRAC 1 cut(s) 789
HindII GTYRAC 1 cut(s) 789
HindIII AAGCTT 2 cut(s) 492, 2276
HpaI GTTAAC 1 cut(s) 789
HpaII CCGG 1 cut(s) 1574
HphI GGTGA 8 cut(s) 115, 554, 1235, 1245, 1990, 2184, 2674, 2727
Hpy166II GTNNAC 6 cut(s) 789, 1028, 1115, 1687, 1877, 2137
Hpy188I TCNGA 9 cut(s) 184, 211, 440, 1104, 1327, 1773, 2034, 2491, 2846
Hpy188III TCNNGA 9 cut(s) 122, 243, 769, 775, 875, 1112, 1270, 1320, 1847
Hpy8I GTNNAC 6 cut(s) 789, 1028, 1115, 1687, 1877, 2137
HpyAV CCTTC 8 cut(s) 414, 428, 752, 1220, 1395, 1444, 1520, 2818
HpyCH4III ACNGT 5 cut(s) 18, 103, 542, 934, 1260
HpyCH4IV ACGT 4 cut(s) 582, 765, 861, 2403
HpyF10VI GCNNNNNNNGC 7 cut(s) 269, 272, 479, 977, 986, 1646, 2751
HpySE526I ACGT 4 cut(s) 582, 765, 861, 2403
Hsp92I GRCGYC 1 cut(s) 2264
HspAI GCGC 1 cut(s) 2229
KspAI GTTAAC 1 cut(s) 789
Kzo9I GATC 8 cut(s) 352, 771, 1078, 1322, 1462, 1673, 2140, 2164
LmnI GCTCC 4 cut(s) 649, 1043, 1229, 2630
LweI GCATC 7 cut(s) 105, 250, 559, 967, 1627, 1914, 2613
MaeI CTAG 6 cut(s) 678, 1140, 1320, 1584, 2028, 2172
MaeII ACGT 4 cut(s) 582, 765, 861, 2403
MalI GATC 8 cut(s) 354, 773, 1080, 1324, 1464, 1675, 2142, 2166
MboI GATC 8 cut(s) 352, 771, 1078, 1322, 1462, 1673, 2140, 2164
MfeI CAATTG 1 cut(s) 2829
MflI RGATCY 3 cut(s) 1078, 1322, 1673
MhlI GDGCHC 3 cut(s) 844, 1734, 2627
MlsI TGGCCA 1 cut(s) 1348
MluNI TGGCCA 1 cut(s) 1348
MlyI GAGTC 8 cut(s) 597, 690, 865, 1260, 2114, 2658, 2670, 2795
MmeI TCCRAC 6 cut(s) 881, 930, 940, 953, 2092, 2626
Mox20I TGGCCA 1 cut(s) 1348
MroXI GAANNNNTTC 1 cut(s) 1869
MscI TGGCCA 1 cut(s) 1348
MseI TTAA 8 cut(s) 168, 788, 1062, 1860, 2045, 2178, 2328, 2591
MslI CAYNNNNRTG 3 cut(s) 101, 170, 1505
Msp20I TGGCCA 1 cut(s) 1348
MspA1I CMGCKG 2 cut(s) 266, 1942
MspI CCGG 1 cut(s) 1574
MspR9I CCNGG 1 cut(s) 1350
MunI CAATTG 1 cut(s) 2829
Mva1269I GAATGC 1 cut(s) 2776
MvaI CCWGG 1 cut(s) 1350
MvnI CGCG 1 cut(s) 1271
MwoI GCNNNNNNNGC 7 cut(s) 269, 272, 479, 977, 986, 1646, 2751
NcoI CCATGG 3 cut(s) 78, 996, 2310
NdeI CATATG 2 cut(s) 696, 1549
NdeII GATC 8 cut(s) 352, 771, 1078, 1322, 1462, 1673, 2140, 2164
NlaIV GGNNCC 6 cut(s) 375, 1039, 1335, 1435, 1790, 2626
NmeAIII GCCGAG 2 cut(s) 697, 2708
NmuCI GTSAC 5 cut(s) 1251, 1468, 1486, 2204, 2404
NruI TCGCGA 1 cut(s) 1271
NspI RCATGY 2 cut(s) 302, 1510
PagI TCATGA 1 cut(s) 774
PceI AGGCCT 1 cut(s) 1152
PciI ACATGT 1 cut(s) 1506
PctI GAATGC 1 cut(s) 2776
PdmI GAANNNNTTC 1 cut(s) 1869
PfeI GAWTC 6 cut(s) 239, 455, 1355, 1709, 2492, 2617
PflFI GACNNNGTC 1 cut(s) 1607
PflMI CCANNNNNTGG 1 cut(s) 1262
PleI GAGTC 8 cut(s) 596, 689, 865, 1260, 2113, 2657, 2669, 2795
PpsI GAGTC 8 cut(s) 596, 689, 865, 1260, 2113, 2657, 2669, 2795
Ppu21I YACGTR 1 cut(s) 862
PpuMI RGGWCCY 1 cut(s) 1789
PscI ACATGT 1 cut(s) 1506
PshBI ATTAAT 1 cut(s) 1860
Psp5II RGGWCCY 1 cut(s) 1789
Psp6I CCWGG 1 cut(s) 1348
PspEI GGTNACC 2 cut(s) 1251, 1530
PspGI CCWGG 1 cut(s) 1348
PspN4I GGNNCC 6 cut(s) 375, 1039, 1335, 1435, 1790, 2626
PspPI GGNCC 7 cut(s) 280, 317, 1334, 1609, 1789, 1877, 2318
PspPPI RGGWCCY 1 cut(s) 1789
PstI CTGCAG 2 cut(s) 271, 2064
PsuI RGATCY 3 cut(s) 1078, 1322, 1673
PsyI GACNNNGTC 1 cut(s) 1607
RruI TCGCGA 1 cut(s) 1271
RsaI GTAC 5 cut(s) 145, 1138, 2074, 2294, 2376
RsaNI GTAC 5 cut(s) 144, 1137, 2073, 2293, 2375
RseI CAYNNNNRTG 3 cut(s) 101, 170, 1505
SaqAI TTAA 8 cut(s) 168, 788, 1062, 1860, 2045, 2178, 2328, 2591
Sau3AI GATC 8 cut(s) 352, 771, 1078, 1322, 1462, 1673, 2140, 2164
Sau96I GGNCC 7 cut(s) 280, 317, 1334, 1609, 1789, 1877, 2318
ScaI AGTACT 1 cut(s) 2294
SchI GAGTC 8 cut(s) 597, 690, 865, 1260, 2114, 2658, 2670, 2795
ScrFI CCNGG 1 cut(s) 1350
SduI GDGCHC 3 cut(s) 844, 1734, 2627
SfaNI GCATC 7 cut(s) 105, 250, 559, 967, 1627, 1914, 2613
SfcI CTRYAG 4 cut(s) 267, 621, 2060, 2253
SinI GGWCC 6 cut(s) 280, 317, 1334, 1609, 1789, 1877
SmiMI CAYNNNNRTG 3 cut(s) 101, 170, 1505
SmlI CTYRAG 2 cut(s) 799, 873
SmoI CTYRAG 2 cut(s) 799, 873
SpeI ACTAGT 1 cut(s) 1583
SseBI AGGCCT 1 cut(s) 1152
SsiI CCGC 5 cut(s) 264, 1157, 1855, 1942, 2246
SspMI CTAG 6 cut(s) 678, 1140, 1320, 1584, 2028, 2172
StuI AGGCCT 1 cut(s) 1152
StyD4I CCNGG 1 cut(s) 1348
StyI CCWWGG 4 cut(s) 66, 78, 996, 2310
TaaI ACNGT 5 cut(s) 18, 103, 542, 934, 1260
TaiI ACGT 4 cut(s) 585, 768, 864, 2406
TaqI TCGA 5 cut(s) 528, 586, 1635, 2393, 2433
TaqII GACCGA 1 cut(s) 1351
TatI WGTACW 3 cut(s) 143, 2072, 2292
TauI GCSGC 2 cut(s) 266, 2249
TfiI GAWTC 6 cut(s) 239, 455, 1355, 1709, 2492, 2617
Tru1I TTAA 8 cut(s) 168, 788, 1062, 1860, 2045, 2178, 2328, 2591
Tru9I TTAA 8 cut(s) 168, 788, 1062, 1860, 2045, 2178, 2328, 2591
TscAI CASTG 3 cut(s) 849, 1495, 2413
TseFI GTSAC 5 cut(s) 1251, 1468, 1486, 2204, 2404
Tsp45I GTSAC 5 cut(s) 1251, 1468, 1486, 2204, 2404
TspGWI ACGGA 1 cut(s) 581
TspRI CASTG 3 cut(s) 849, 1495, 2413
Tth111I GACNNNGTC 1 cut(s) 1607
Van91I CCANNNNNTGG 1 cut(s) 1262
VpaK11BI GGWCC 6 cut(s) 280, 317, 1334, 1609, 1789, 1877
VspI ATTAAT 1 cut(s) 1860
XapI RAATTY 2 cut(s) 1630, 2707
XbaI TCTAGA 1 cut(s) 1319
XceI RCATGY 2 cut(s) 302, 1510
XcmI CCANNNNNNNNNTGG 1 cut(s) 2308
XmiI GTMKAC 1 cut(s) 2136
XmnI GAANNNNTTC 1 cut(s) 1869
XspI CTAG 6 cut(s) 678, 1140, 1320, 1584, 2028, 2172
ZrmI AGTACT 1 cut(s) 2294
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.