RchiOBHm_Chr6g0310811

Glutamate receptor

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Reverse (-)
68048617 .. 68050269
1653 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ27948

Sequence Viewer

Length: 1158 bp
ATGAACAGAACCAATGTCACTGGATACTGCATGGATGTCATTCACGCTGTAATTGAAGCATTACCATATGATGTTCCGTACGAGTTTTTTGCCTTTGCAAAGCCTGAAAGTTATGATGATTTGGTCAATCAAGTGTTTCTTGAGAACTATGATGCTGCAGTGGGAGATATAACCATTAGAGCAAACAGATCCTTGTATGTCGACTTCACATTGCCATACATAGAATCAGGGATATCAATGGTCGTGCCTATCAAAGAGGACACCAATTCTAAAAATACTTGGGTGTTCTTAAAGCCTTTGACCTGGGACCTTTGGGCAGCATCCGGTTGTTTTTTCATATTCATTGGTTTTGTGGTCTGGGTTCTTGAACATCGGATTAACAAAGATTTCCGGGGATCTCCAAATCAGCAAATCAGCACAAGCTTTTGGTTTGGCCTCTCAACCATGGTTTTTACCCACCGGGAGCAAGTAGTCAGCTGCTTGGCTCGGTTTGTAGTAATTGTATGGTGCTTTGTTGTCCTCATAATGACACAGAGTTATGCTGCCATTTTAGCAACATTTTTAACAGTTCAACAGCTGCAACCAACTGTTACAGATGTAAACCTGCTCATAAAGAACGGGGACAGTGTTGGTTACCCAACAGGTTCTTCCCTTTATGGTACATTGAAGCAATTAGGATTCCACGATGAAAACTTTAAGACCTACAATTCAGCAGAAGAATTGGATGAACTTTTCCAAAATGGAAATCATGGTATTTCTGCTGCTTTTGATGAAGCCCCCTACATGAGACTTTTTGTTGCAACTTTCTGCTCGAAAAATACCATGATTGAGTCAACATTTAAAGCTGATGGTTTTGCCTCTGAGGGAGTTGATATGAGGCATGTCGACAACAAGTGGTTCAGGAAGAAAGCAAGTTGTTCAAACCCCCATACTGCAGGATCTTCCAATAGTGTTACTCTTGGCCTTGATAGCTTTTGGGGGCTCTTCCTCATTGCTGGGGTTGCTTCATTGTTAGCTTTGCTCATTTTTGCTGCTATGTTCCTCGATGAGCATAGATACACCTTGAGATGCATTGATCCTGAAATCTCGTTTTGGAGAAGAATTTGTGTCATATTGAGAGTGTATGACCAAAAAAGACCTCAGTTCAAAGACTTATAA

Protein Analysis

385

Amino Acids

43.78

Weight (kDa)

5.4

Isoelectric Point (pI)

30.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lig_chan-Glu_bd PF10613 4 - 83 5e-10 Ligated ion channel L-glutamate- and glycine-binding site
SBP_bac_3 PF00497 4 - 151 1.6e-06 Bacterial extracellular solute-binding proteins, family 3
Lig_chan PF00060 101 - 335 1.2e-37 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1156
Acc36I ACCTGC 1 cut(s) 612
AccI GTMKAC 2 cut(s) 201, 885
AclWI GGATC 4 cut(s) 183, 403, 946, 1070
AcsI RAATTY 1 cut(s) 1101
AfaI GTAC 2 cut(s) 80, 661
AgsI TTSAA 6 cut(s) 56, 368, 572, 667, 921, 1147
AjnI CCWGG 1 cut(s) 302
AjuI GAANNNNNNNTTGG 2 cut(s) 631, 663
AluBI AGCT 6 cut(s) 423, 477, 577, 845, 972, 1016
AluI AGCT 6 cut(s) 423, 477, 577, 845, 972, 1016
Alw26I GTCTC 1 cut(s) 781
AlwI GGATC 4 cut(s) 183, 403, 946, 1070
AoxI GGCC 2 cut(s) 433, 961
ApeKI GCWGC 7 cut(s) 155, 317, 477, 542, 577, 761, 1031
ApoI RAATTY 1 cut(s) 1101
AspS9I GGNCC 1 cut(s) 307
AsuC2I CCSGG 2 cut(s) 392, 461
AvaII GGWCC 1 cut(s) 307
BanII GRGCYC 1 cut(s) 984
BarI GAAGNNNNNNTAC 2 cut(s) 188, 220
BbvI GCAGC 7 cut(s) 142, 329, 464, 529, 564, 748, 1018
BccI CCATC 1 cut(s) 842
BcgI CGANNNNNNTGC 2 cut(s) 71, 105
BciT130I CCWGG 1 cut(s) 304
BciVI GTATCC 1 cut(s) 17
BcnI CCSGG 2 cut(s) 392, 461
BcoDI GTCTC 1 cut(s) 781
BfmI CTRYAG 2 cut(s) 156, 933
BfuAI ACCTGC 1 cut(s) 612
BfuI GTATCC 1 cut(s) 17
BisI GCNGC 7 cut(s) 156, 318, 478, 543, 578, 762, 1032
BlsI GCNGC 7 cut(s) 157, 319, 479, 544, 579, 763, 1033
Bme1390I CCNGG 3 cut(s) 304, 392, 461
Bme18I GGWCC 1 cut(s) 307
BmgT120I GGNCC 1 cut(s) 307
BmiI GGNNCC 1 cut(s) 308
BmrFI CCNGG 3 cut(s) 304, 392, 461
BmsI GCATC 3 cut(s) 142, 329, 1058
BpuEI CTTGAG 2 cut(s) 161, 1084
BpuMI CCSGG 2 cut(s) 392, 461
BsaJI CCNNGG 3 cut(s) 303, 391, 444
BsaWI WCCGGW 1 cut(s) 323
Bse1I ACTGG 1 cut(s) 25
Bse3DI GCAATG 2 cut(s) 209, 990
BseBI CCWGG 1 cut(s) 304
BseDI CCNNGG 3 cut(s) 303, 391, 444
BseGI GGATG 3 cut(s) 40, 320, 730
BseMI GCAATG 2 cut(s) 209, 990
BseMII CTCAG 2 cut(s) 852, 1154
BseNI ACTGG 1 cut(s) 25
BseXI GCAGC 7 cut(s) 142, 329, 464, 529, 564, 748, 1018
BseYI CCCAGC 1 cut(s) 995
BshFI GGCC 2 cut(s) 435, 963
BsiSI CCGG 3 cut(s) 324, 391, 460
BsiWI CGTACG 1 cut(s) 78
BslFI GGGAC 2 cut(s) 320, 635
BsmAI GTCTC 1 cut(s) 781
BsmFI GGGAC 2 cut(s) 320, 635
BsnI GGCC 2 cut(s) 435, 963
Bsp1286I GDGCHC 1 cut(s) 984
Bsp143I GATC 4 cut(s) 188, 395, 938, 1075
Bsp19I CCATGG 1 cut(s) 444
BspANI GGCC 2 cut(s) 435, 963
BspCNI CTCAG 2 cut(s) 853, 1153
BspLI GGNNCC 1 cut(s) 308
BspMAI CTGCAG 2 cut(s) 160, 937
BspMI ACCTGC 1 cut(s) 612
BspPI GGATC 4 cut(s) 183, 403, 946, 1070
BspQI GCTCTTC 1 cut(s) 989
BsrDI GCAATG 2 cut(s) 209, 990
BsrI ACTGG 1 cut(s) 25
BssECI CCNNGG 3 cut(s) 303, 391, 444
BssMI GATC 4 cut(s) 188, 395, 938, 1075
BssT1I CCWWGG 1 cut(s) 444
Bst2UI CCWGG 1 cut(s) 304
Bst4CI ACNGT 3 cut(s) 568, 589, 626
Bst6I CTCTTC 1 cut(s) 989
BstDEI CTNAG 2 cut(s) 861, 1140
BstDSI CCRYGG 1 cut(s) 444
BstEII GGTNACC 1 cut(s) 632
BstF5I GGATG 3 cut(s) 40, 320, 730
BstKTI GATC 4 cut(s) 191, 398, 941, 1078
BstMAI GTCTC 1 cut(s) 781
BstMBI GATC 4 cut(s) 188, 395, 938, 1075
BstMWI GCNNNNNNNGC 3 cut(s) 551, 969, 1001
BstNI CCWGG 1 cut(s) 304
BstNSI RCATGY 1 cut(s) 884
BstPI GGTNACC 1 cut(s) 632
BstSCI CCNGG 3 cut(s) 302, 390, 459
BstSFI CTRYAG 2 cut(s) 156, 933
BstV1I GCAGC 7 cut(s) 142, 329, 464, 529, 564, 748, 1018
BstX2I RGATCY 3 cut(s) 188, 395, 938
BstYI RGATCY 3 cut(s) 188, 395, 938
BsuI GTATCC 1 cut(s) 17
BsuRI GGCC 2 cut(s) 435, 963
BtgI CCRYGG 1 cut(s) 444
BtsCI GGATG 3 cut(s) 40, 320, 730
BtsI GCAGTG 1 cut(s) 165
BtsIMutI CAGTG 3 cut(s) 18, 165, 631
BveI ACCTGC 1 cut(s) 612
Cfr13I GGNCC 1 cut(s) 307
Csp6I GTAC 2 cut(s) 79, 660
CviAII CATG 6 cut(s) 31, 445, 749, 784, 823, 881
CviQI GTAC 2 cut(s) 79, 660
DdeI CTNAG 2 cut(s) 861, 1140
DpnI GATC 4 cut(s) 190, 397, 940, 1077
DpnII GATC 4 cut(s) 188, 395, 938, 1075
DraI TTTAAA 1 cut(s) 841
Eam1104I CTCTTC 1 cut(s) 989
EarI CTCTTC 1 cut(s) 989
Eco130I CCWWGG 1 cut(s) 444
Eco24I GRGCYC 1 cut(s) 984
Eco32I GATATC 1 cut(s) 234
Eco47I GGWCC 1 cut(s) 307
Eco91I GGTNACC 1 cut(s) 632
EcoO109I RGGNCCY 1 cut(s) 307
EcoO65I GGTNACC 1 cut(s) 632
EcoRII CCWGG 1 cut(s) 302
EcoRV GATATC 1 cut(s) 234
EcoT14I CCWWGG 1 cut(s) 444
EcoT22I ATGCAT 1 cut(s) 1073
EcoT38I GRGCYC 1 cut(s) 984
ErhI CCWWGG 1 cut(s) 444
FaeI CATG 6 cut(s) 34, 448, 752, 787, 826, 884
FalI AAGNNNNNCTT 2 cut(s) 123, 155
FaqI GGGAC 2 cut(s) 320, 635
FatI CATG 6 cut(s) 30, 444, 748, 783, 822, 880
FauNDI CATATG 1 cut(s) 67
FblI GTMKAC 2 cut(s) 201, 885
Fnu4HI GCNGC 7 cut(s) 156, 318, 478, 543, 578, 762, 1032
FokI GGATG 3 cut(s) 47, 307, 737
FriOI GRGCYC 1 cut(s) 984
Fsp4HI GCNGC 7 cut(s) 156, 318, 478, 543, 578, 762, 1032
GluI GCNGC 7 cut(s) 156, 318, 478, 543, 578, 762, 1032
GsaI CCCAGC 1 cut(s) 999
HaeIII GGCC 2 cut(s) 435, 963
HapII CCGG 3 cut(s) 324, 391, 460
Hin1II CATG 6 cut(s) 34, 448, 752, 787, 826, 884
HincII GTYRAC 3 cut(s) 202, 834, 886
HindII GTYRAC 3 cut(s) 202, 834, 886
HindIII AAGCTT 1 cut(s) 421
HinfI GANTC 3 cut(s) 224, 678, 830
HpaII CCGG 3 cut(s) 324, 391, 460
Hpy166II GTNNAC 4 cut(s) 202, 601, 834, 886
Hpy188I TCNGA 2 cut(s) 375, 862
Hpy188III TCNNGA 4 cut(s) 140, 365, 901, 1079
Hpy8I GTNNAC 4 cut(s) 202, 601, 834, 886
HpyCH4III ACNGT 3 cut(s) 568, 589, 626
HpyCH4V TGCA 7 cut(s) 30, 98, 158, 580, 800, 935, 1071
HpyF10VI GCNNNNNNNGC 3 cut(s) 551, 969, 1001
HpyF3I CTNAG 2 cut(s) 861, 1140
Hsp92II CATG 6 cut(s) 34, 448, 752, 787, 826, 884
Kzo9I GATC 4 cut(s) 188, 395, 938, 1075
LguI GCTCTTC 1 cut(s) 989
LmnI GCTCC 1 cut(s) 463
Lsp1109I GCAGC 7 cut(s) 142, 329, 464, 529, 564, 748, 1018
LweI GCATC 3 cut(s) 142, 329, 1058
MaeIII GTNAC 4 cut(s) 16, 589, 632, 952
MalI GATC 4 cut(s) 190, 397, 940, 1077
MboI GATC 4 cut(s) 188, 395, 938, 1075
MboII GAAGA 6 cut(s) 639, 728, 916, 933, 976, 1110
MflI RGATCY 3 cut(s) 188, 395, 938
MhlI GDGCHC 1 cut(s) 984
MluCI AATT 7 cut(s) 51, 265, 498, 671, 706, 719, 1101
MlyI GAGTC 1 cut(s) 839
MnlI CCTC 9 cut(s) 250, 446, 530, 856, 868, 870, 998, 1052, 1149
Mph1103I ATGCAT 1 cut(s) 1073
MseI TTAA 5 cut(s) 290, 378, 563, 696, 840
MspA1I CMGCKG 2 cut(s) 477, 577
MspI CCGG 3 cut(s) 324, 391, 460
MspR9I CCNGG 3 cut(s) 304, 392, 461
MvaI CCWGG 1 cut(s) 304
MwoI GCNNNNNNNGC 3 cut(s) 551, 969, 1001
NciI CCSGG 2 cut(s) 392, 461
NcoI CCATGG 1 cut(s) 444
NdeI CATATG 1 cut(s) 67
NdeII GATC 4 cut(s) 188, 395, 938, 1075
NlaIII CATG 6 cut(s) 34, 448, 752, 787, 826, 884
NlaIV GGNNCC 1 cut(s) 308
NmuCI GTSAC 1 cut(s) 16
NsiI ATGCAT 1 cut(s) 1073
NspI RCATGY 1 cut(s) 884
PciSI GCTCTTC 1 cut(s) 989
PfeI GAWTC 2 cut(s) 224, 678
Pfl23II CGTACG 1 cut(s) 78
PkrI GCNGC 7 cut(s) 157, 319, 479, 544, 579, 763, 1033
PleI GAGTC 1 cut(s) 838
PpsI GAGTC 1 cut(s) 838
PpuMI RGGWCCY 1 cut(s) 307
PsiI TTATAA 1 cut(s) 1156
Psp5II RGGWCCY 1 cut(s) 307
Psp6I CCWGG 1 cut(s) 302
PspEI GGTNACC 1 cut(s) 632
PspFI CCCAGC 1 cut(s) 995
PspGI CCWGG 1 cut(s) 302
PspLI CGTACG 1 cut(s) 78
PspN4I GGNNCC 1 cut(s) 308
PspPI GGNCC 1 cut(s) 307
PspPPI RGGWCCY 1 cut(s) 307
PstI CTGCAG 2 cut(s) 160, 937
PsuI RGATCY 3 cut(s) 188, 395, 938
PvuII CAGCTG 2 cut(s) 477, 577
RsaI GTAC 2 cut(s) 80, 661
RsaNI GTAC 2 cut(s) 79, 660
SalI GTCGAC 2 cut(s) 200, 884
SapI GCTCTTC 1 cut(s) 989
SaqAI TTAA 5 cut(s) 290, 378, 563, 696, 840
SatI GCNGC 7 cut(s) 156, 318, 478, 543, 578, 762, 1032
Sau3AI GATC 4 cut(s) 188, 395, 938, 1075
Sau96I GGNCC 1 cut(s) 307
SchI GAGTC 1 cut(s) 839
ScrFI CCNGG 3 cut(s) 304, 392, 461
SduI GDGCHC 1 cut(s) 984
SfaNI GCATC 3 cut(s) 142, 329, 1058
SfcI CTRYAG 2 cut(s) 156, 933
SinI GGWCC 1 cut(s) 307
SmlI CTYRAG 2 cut(s) 140, 1063
SmoI CTYRAG 2 cut(s) 140, 1063
Sse9I AATT 7 cut(s) 51, 265, 498, 671, 706, 719, 1101
StyD4I CCNGG 3 cut(s) 302, 390, 459
StyI CCWWGG 1 cut(s) 444
TaaI ACNGT 3 cut(s) 568, 589, 626
TaqI TCGA 4 cut(s) 201, 812, 885, 1044
TasI AATT 7 cut(s) 51, 265, 498, 671, 706, 719, 1101
TfiI GAWTC 2 cut(s) 224, 678
Tru1I TTAA 5 cut(s) 290, 378, 563, 696, 840
Tru9I TTAA 5 cut(s) 290, 378, 563, 696, 840
TscAI CASTG 3 cut(s) 25, 165, 631
TseFI GTSAC 1 cut(s) 16
TseI GCWGC 7 cut(s) 155, 317, 477, 542, 577, 761, 1031
Tsp45I GTSAC 1 cut(s) 16
TspDTI ATGAA 7 cut(s) 17, 325, 331, 702, 741, 786, 996
TspGWI ACGGA 1 cut(s) 66
TspRI CASTG 3 cut(s) 25, 165, 631
VpaK11BI GGWCC 1 cut(s) 307
XapI RAATTY 1 cut(s) 1101
XceI RCATGY 1 cut(s) 884
XmiI GTMKAC 2 cut(s) 201, 885
Zsp2I ATGCAT 1 cut(s) 1073
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.