AT2G29120

Glutamate-gated receptor that probably acts as non- selective cation channel

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Reverse (-)
12511246 .. 12515947
4702 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G29120.1

Sequence Viewer

Length: 2859 bp
ATGAAAGTGATGAACCCTAGAAAAACTAATAATACCTTTATGTATTACTTTGTCCTGTTCGTTTGTGGTTTTGTGTTGATGGAGGGTTGTTTAGGACAAAACCAAACAACTGAAATCAAAGTAGGAGTAGTGCTTGATCTCCATACTTCATTTTCCAAGCTCTGCCTCACTTCCATTAACATATCGTTGTCCGATTTCTACAAATATCATTCTGATTACACCACGAGACTTGCGATTCACATTAGAGATTCCATGGAAGATGTTGTCCAGGCCTCATCTGCAGCCTTGGACCTAATCAAGAACGAGCAAGTGAGCGCCATCATCGGGCCAAGAACCTCTATGCAAGCTGAGTTCATGATAAGACTCGCCGATAAATCACAAGTACCGACCATCACATTCTCTGCAACATGCCCTCTTCTGACATCCATCAACAGCCCTTACTTTGTCCGAGCCACTCTCGATGACTCATCCCAGGTCAAAGCCATTGCGGCCATTGTCAAATCCTTCGGGTGGAGAAATGTAGTTGCCATTTATGTGGACAACGAATTCGGAGAAGGAATATTGCCATTATTGACTGACGCTTTACAAGACGTGCAAGCTTTTGTAGTCAATAGATGTTTGATCCCTCAGGAGGCTAATGATGATCAAATTCTCAAGGAGCTTTATAAGCTAATGACGATGCAGACGAGGGTATTCGTTGTCCACATGCCACCAACTCTCGGTTTTCGTTTTTTTCAGAAAGCTAGAGAGATTGGTATGATGGAGGAAGGATATGTATGGTTATTGACAGATGGAGTGATGAATTTGTTGAAATCTAATGAACGCGGTAGCAGCTTGGAGAATATGCAAGGGGTTTTGGGTGTAAGGAGCCATATCCCCAAATCGAAGAAGCTCAAAAATTTCAGATTGAGATGGGAAAAAATGTTTCCTAAGAAGGGGAATGATGAAGAGATGAACATTTTTGCGTTAAGGGCATATGATTCGATCACTGCCTTAGCAATGGCCGTGGAGAAAACCAATATAAAGAGCTTGCGGTATGATCATCCGATCGCTTCAGGAAATAATAAGACAAATTTGGGGACATTAGGGGTCTCTCGCTACGGTCCAAGTCTTCTTAAGGCTCTTTCGAATGTAAGATTCAATGGTTTAGCCGGAGAGTTTGAGCTCATTAACGGGCAGCTAGAATCATCAGTGTTTGACGTCATCAATATTATTGGAAGTGAAGAGAGAATTATTGGATTATGGAGACCAAGCAATGGAATTGTTAATGCAAAGTCAAAAAACACTACGTCGGTTTTAGGGGAGAGGTTGGGGCCGGTGATATGGCCCGGTAAGTCGAAAGATGTTCCGAAAGGTTGGCAGATTCCAACAAACGGAAAGATGCTTAGAGTGGGCATTCCAGTGAAGAAAGGCTTCTTAGAATTTGTGGATGCAAAGATAGATCCGATCAGTAACGCAATGACCCCAACGGGTTACTGTATTGAGATATTCGAAGCTGTTCTTAAGAAGTTGCCTTACTCCGTCATTCCTAAATATATTGCTTTCTTGTCTCCAGATGAGAACTATGATGAAATGGTATACCAAGTATACACCGGGGCCTATGACGCAGTTGTGGGAGATGTAACCATAGTAGCAAACAGGTCATTGTATGTCGATTTCACGCTACCGTACACAGAGTCTGGAGTGTCTATGATGGTACCCCTCAAGGACAACAAGAACACATGGGTGTTCCTCAGACCTTGGAGCTTAGACCTATGGGTCACCACTGCTTGCTTTTTCGTATTCATTGGGTTTATCGTGTGGATTTTAGAACATAGAGTCAACACCGACTTTCGCGGACCGCCTCACCACCAAATAGGCACCAGTTTTTGGTTCGCTTTCTCCACTATGAACTTTGCCCACCGTGAGAAGGTGGTGAGTAATTTAGCGAGGTTTGTGGTGTTGGTGTGGTGCTTCGTGGTGCTTGTGCTGATTCAGAGCTATACAGCGAATCTCACATCTTTCTTCACAGTAAAACTGTTGCAACCAACGGTTACAAATTGGAAAGATCTCATAAAATTTAACAAAAATATTGGGTACCAACGGGGCACTTTCGTGCGTGAACTTTTGAAAAGTCAAGGATTTGATGAATCACAGCTCAAACCTTTTGGTTCTGCCGTAGAATGTGACGAGCTTTTTTCCAATGGGACAATCACAGCATCTTTTGACGAAGTGGCCTACATTAAAGTTATCCTTTCTCAGAATTCCTCCAAATATACTATGGTTGAACCATCCTTTAAGACTGCTGGTTTTGGCTTTGTATTCCCCAAAAAATCACCTTTGACGGATGATGTCTCAAGGGCGATCTTGAATGTGACACAAGGCGAAGAAATGCAACATATTGAGAATAAATGGTTTAAGAAACCAAATAATTGTCCAGATCTAAACACTTCTCTGTCCTCCAACCATCTCAGCCTGAGTAGCTTCTGGGGTCTGTTTCTTATAGCAGGCATAGCTTCATTCTTGGCACTTCTCATCTTCGTGGCCAACTTCTTGTACGAACACAAGCACACGCTCTTTGATGACTCCGAAAATTCTTTCCGTGGAAAGCTAAAATTTTTGGTTAGAAACTTTGATGAGAAAGACATAAAGTCGCATATGTTCAAGGAGAATGCCGTTCATAATGTGAGTTCACCTATTACTCAAGGAAGTTCAAGCCCTTTGACCGATCAGAGCACTCCATTGCCGCGAAGTCCGGAACAGTATAGGGAATTAGAGCTAAGAAGAGTGTCTTCCATCTCGAGCGGTGAACTTTTCACTACGCAATCAGAACAAGTTGAAGATGAGGAATCTGCTATAATTCAATGTGAAGGTGAATGA

Protein Analysis

952

Amino Acids

107.4

Weight (kDa)

6.98

Isoelectric Point (pI)

33.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peripla_BP_6 PF13458 39 - 392 7.3e-21 Periplasmic binding protein
ANF_receptor PF01094 55 - 406 4.7e-94 Receptor family ligand binding region
SBP_bac_3 PF00497 486 - 800 2.7e-12 Bacterial extracellular solute-binding proteins, family 3
Lig_chan-Glu_bd PF10613 486 - 567 1e-07 Ligated ion channel L-glutamate- and glycine-binding site
Lig_chan PF00060 582 - 832 1.8e-40 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 666
AasI GACNNNNNNGTC 1 cut(s) 1757
AatII GACGTC 1 cut(s) 1203
Acc65I GGTACC 2 cut(s) 1696, 2076
AccB1I GGYRCC 3 cut(s) 1696, 1859, 2076
AccB7I CCANNNNNTGG 2 cut(s) 1256, 1869
AccBSI CCGCTC 1 cut(s) 2784
AccI GTMKAC 2 cut(s) 1578, 1587
AccII CGCG 3 cut(s) 825, 1836, 2728
AccIII TCCGGA 1 cut(s) 2734
AciI CCGC 7 cut(s) 488, 825, 1033, 1836, 1841, 2726, 2784
AclWI GGATC 2 cut(s) 616, 1436
AcoI YGGCCR 3 cut(s) 489, 1002, 2523
AcuI CTGAAG 1 cut(s) 1038
AcyI GRCGYC 1 cut(s) 1200
AfaI GTAC 5 cut(s) 384, 1670, 1698, 2078, 2537
AfiI CCNNNNNNNGG 9 cut(s) 324, 510, 631, 719, 935, 1256, 1373, 1869, 1909
AflII CTTAAG 2 cut(s) 1115, 1502
AgsI TTSAA 9 cut(s) 811, 1141, 2110, 2267, 2350, 2644, 2694, 2819, 2843
AhdI GACNNNNNGTC 1 cut(s) 2629
AjiI CACGTC 1 cut(s) 592
AjnI CCWGG 2 cut(s) 267, 471
AleI CACNNNNGTG 2 cut(s) 1724, 2093
Alw21I GWGCWC 2 cut(s) 1167, 2717
Alw26I GTCTC 5 cut(s) 220, 1096, 1240, 1554, 2338
AlwI GGATC 2 cut(s) 616, 1436
AlwNI CAGNNNCTG 1 cut(s) 1679
Ama87I CYCGRG 1 cut(s) 2779
Aor13HI TCCGGA 1 cut(s) 2734
AoxI GGCC 9 cut(s) 270, 326, 489, 1002, 1313, 1325, 1596, 2214, 2523
ApeKI GCWGC 3 cut(s) 281, 831, 1177
ArsI GACNNNNNNTTYG 2 cut(s) 530, 562
Asp700I GAANNNNTTC 2 cut(s) 1412, 1497
Asp718I GGTACC 2 cut(s) 1696, 2076
AspLEI GCGC 1 cut(s) 317
AspS9I GGNCC 7 cut(s) 289, 326, 1103, 1313, 1326, 1596, 1838
AsuC2I CCSGG 2 cut(s) 1329, 1594
AsuHPI GGTGA 7 cut(s) 1330, 1753, 1838, 1927, 2307, 2664, 2798
AsuII TTCGAA 2 cut(s) 1127, 1491
AvaI CYCGRG 1 cut(s) 2779
AvaII GGWCC 3 cut(s) 289, 1103, 1838
AxyI CCTNAGG 1 cut(s) 627
BaeGI GKGCMC 1 cut(s) 2090
BalI TGGCCA 1 cut(s) 2525
BanI GGYRCC 3 cut(s) 1696, 1859, 2076
BanII GRGCYC 1 cut(s) 1167
BarI GAAGNNNNNNTAC 2 cut(s) 1499, 1531
BauI CACGAG 1 cut(s) 223
BbsI GAAGAC 2 cut(s) 1103, 2763
Bbv12I GWGCWC 2 cut(s) 1167, 2717
BbvI GCAGC 3 cut(s) 293, 843, 1189
BceAI ACGGC 3 cut(s) 989, 2141, 2639
BcgI CGANNNNNNTGC 2 cut(s) 963, 997
BciT130I CCWGG 2 cut(s) 269, 473
BclI TGATCA 2 cut(s) 643, 1039
BcnI CCSGG 2 cut(s) 1329, 1594
BcoDI GTCTC 5 cut(s) 220, 1096, 1240, 1554, 2338
BfaI CTAG 3 cut(s) 18, 744, 1181
BfmI CTRYAG 1 cut(s) 279
BfoI RGCGCY 1 cut(s) 318
BfrI CTTAAG 2 cut(s) 1115, 1502
BglI GCCNNNNNGGC 1 cut(s) 488
BglII AGATCT 2 cut(s) 2047, 2419
BisI GCNGC 5 cut(s) 282, 489, 832, 1178, 2726
BlsI GCNGC 5 cut(s) 283, 490, 833, 1179, 2727
Bme1390I CCNGG 4 cut(s) 269, 473, 1329, 1594
Bme18I GGWCC 3 cut(s) 289, 1103, 1838
BmeRI GACNNNNNGTC 1 cut(s) 2629
BmeT110I CYCGRG 1 cut(s) 2779
BmgBI CACGTC 1 cut(s) 592
BmgT120I GGNCC 7 cut(s) 289, 326, 1103, 1313, 1326, 1596, 1838
BmiI GGNNCC 6 cut(s) 869, 1314, 1597, 1698, 1861, 2078
BmrFI CCNGG 4 cut(s) 269, 473, 1329, 1594
BmsI GCATC 4 cut(s) 669, 1371, 1420, 2207
BpiI GAAGAC 2 cut(s) 1103, 2763
BplI GAGNNNNNCTC 2 cut(s) 441, 473
BpmI CTGGAG 2 cut(s) 1536, 1701
Bpu10I CCTNAGC 1 cut(s) 994
Bpu14I TTCGAA 2 cut(s) 1127, 1491
BpuEI CTTGAG 4 cut(s) 638, 1688, 2320, 2667
BpuMI CCSGG 2 cut(s) 1329, 1594
BsaHI GRCGYC 1 cut(s) 1200
BsaI GGTCTC 2 cut(s) 1096, 1240
BsaJI CCNNGG 7 cut(s) 252, 285, 471, 1005, 1593, 1739, 2581
BsaWI WCCGGW 1 cut(s) 2734
Bsc4I CCNNNNNNNGG 9 cut(s) 324, 510, 631, 719, 935, 1256, 1373, 1869, 1909
Bse118I RCCGGY 1 cut(s) 1315
Bse1I ACTGG 2 cut(s) 1400, 1863
Bse21I CCTNAGG 1 cut(s) 627
Bse3DI GCAATG 5 cut(s) 483, 1005, 1261, 1464, 2720
BseAI TCCGGA 1 cut(s) 2734
BseBI CCWGG 2 cut(s) 269, 473
BseDI CCNNGG 7 cut(s) 252, 285, 471, 1005, 1593, 1739, 2581
BseGI GGATG 6 cut(s) 422, 467, 1042, 1435, 2270, 2332
BseLI CCNNNNNNNGG 9 cut(s) 324, 510, 631, 719, 935, 1256, 1373, 1869, 1909
BseMI GCAATG 5 cut(s) 483, 1005, 1261, 1464, 2720
BseMII CTCAG 6 cut(s) 339, 641, 1747, 2252, 2447, 2464
BseNI ACTGG 2 cut(s) 1400, 1863
BseSI GKGCMC 1 cut(s) 2090
BseXI GCAGC 3 cut(s) 293, 843, 1189
Bsh1236I CGCG 3 cut(s) 825, 1836, 2728
Bsh1285I CGRYCG 1 cut(s) 1050
BshFI GGCC 9 cut(s) 272, 328, 491, 1004, 1315, 1327, 1598, 2216, 2525
BshNI GGYRCC 3 cut(s) 1696, 1859, 2076
BsiEI CGRYCG 1 cut(s) 1050
BsiHKAI GWGCWC 2 cut(s) 1167, 2717
BsiHKCI CYCGRG 1 cut(s) 2779
BsiSI CCGG 5 cut(s) 1152, 1316, 1329, 1593, 2735
BslFI GGGAC 2 cut(s) 1093, 2200
BslI CCNNNNNNNGG 9 cut(s) 324, 510, 631, 719, 935, 1256, 1373, 1869, 1909
BsmAI GTCTC 5 cut(s) 220, 1096, 1240, 1554, 2338
BsmFI GGGAC 2 cut(s) 1093, 2200
BsmI GAATGC 2 cut(s) 1395, 2656
BsnI GGCC 9 cut(s) 272, 328, 491, 1004, 1315, 1327, 1598, 2216, 2525
Bso31I GGTCTC 2 cut(s) 1096, 1240
BsoBI CYCGRG 1 cut(s) 2779
Bsp119I TTCGAA 2 cut(s) 1127, 1491
Bsp1286I GDGCHC 3 cut(s) 1167, 2090, 2717
Bsp13I TCCGGA 1 cut(s) 2734
Bsp19I CCATGG 1 cut(s) 252
BspACI CCGC 7 cut(s) 488, 825, 1033, 1836, 1841, 2726, 2784
BspANI GGCC 9 cut(s) 272, 328, 491, 1004, 1315, 1327, 1598, 2216, 2525
BspCNI CTCAG 6 cut(s) 340, 640, 1746, 2251, 2448, 2463
BspEI TCCGGA 1 cut(s) 2734
BspFNI CGCG 3 cut(s) 825, 1836, 2728
BspHI TCATGA 1 cut(s) 354
BspLI GGNNCC 6 cut(s) 869, 1314, 1597, 1698, 1861, 2078
BspMAI CTGCAG 1 cut(s) 283
BspPI GGATC 2 cut(s) 616, 1436
BspT104I TTCGAA 2 cut(s) 1127, 1491
BspT107I GGYRCC 3 cut(s) 1696, 1859, 2076
BspTI CTTAAG 2 cut(s) 1115, 1502
BspTNI GGTCTC 2 cut(s) 1096, 1240
BsrBI CCGCTC 1 cut(s) 2784
BsrDI GCAATG 5 cut(s) 483, 1005, 1261, 1464, 2720
BsrFI RCCGGY 1 cut(s) 1315
BsrI ACTGG 2 cut(s) 1400, 1863
BssAI RCCGGY 1 cut(s) 1315
BssECI CCNNGG 7 cut(s) 252, 285, 471, 1005, 1593, 1739, 2581
BssNAI GTATAC 2 cut(s) 1579, 1588
BssNI GRCGYC 1 cut(s) 1200
BssSI CACGAG 1 cut(s) 223
BssT1I CCWWGG 3 cut(s) 252, 285, 1739
Bst1107I GTATAC 2 cut(s) 1579, 1588
Bst2BI CACGAG 1 cut(s) 223
Bst2UI CCWGG 2 cut(s) 269, 473
Bst4CI ACNGT 8 cut(s) 1103, 1478, 1668, 1904, 2011, 2019, 2032, 2742
Bst6I CTCTTC 4 cut(s) 420, 942, 1218, 2758
BstACI GRCGYC 1 cut(s) 1200
BstAFI CTTAAG 2 cut(s) 1115, 1502
BstBI TTCGAA 2 cut(s) 1127, 1491
BstC8I GCNNGC 5 cut(s) 345, 597, 1031, 1771, 2488
BstDSI CCRYGG 3 cut(s) 252, 1005, 2581
BstEII GGTNACC 1 cut(s) 1759
BstF5I GGATG 6 cut(s) 422, 467, 1042, 1435, 2270, 2332
BstFNI CGCG 3 cut(s) 825, 1836, 2728
BstH2I RGCGCY 1 cut(s) 318
BstHHI GCGC 1 cut(s) 317
BstMAI GTCTC 5 cut(s) 220, 1096, 1240, 1554, 2338
BstMCI CGRYCG 1 cut(s) 1050
BstMWI GCNNNNNNNGC 8 cut(s) 278, 488, 667, 831, 971, 1604, 2460, 2492
BstNI CCWGG 2 cut(s) 269, 473
BstNSI RCATGY 2 cut(s) 411, 709
BstPI GGTNACC 1 cut(s) 1759
BstSCI CCNGG 4 cut(s) 267, 471, 1327, 1592
BstSFI CTRYAG 1 cut(s) 279
BstSLI GKGCMC 1 cut(s) 2090
BstUI CGCG 3 cut(s) 825, 1836, 2728
BstV1I GCAGC 3 cut(s) 293, 843, 1189
BstV2I GAAGAC 2 cut(s) 1103, 2763
BstX2I RGATCY 3 cut(s) 1441, 2047, 2419
BstXI CCANNNNNNTGG 1 cut(s) 535
BstYI RGATCY 3 cut(s) 1441, 2047, 2419
BstZ17I GTATAC 2 cut(s) 1579, 1588
Bsu36I CCTNAGG 1 cut(s) 627
BsuRI GGCC 9 cut(s) 272, 328, 491, 1004, 1315, 1327, 1598, 2216, 2525
BtgI CCRYGG 3 cut(s) 252, 1005, 2581
BtrI CACGTC 1 cut(s) 592
BtsCI GGATG 6 cut(s) 422, 467, 1042, 1435, 2270, 2332
BtsI GCAGTG 2 cut(s) 987, 1764
BtsIMutI CAGTG 4 cut(s) 987, 1197, 1407, 1764
Cac8I GCNNGC 5 cut(s) 345, 597, 1031, 1771, 2488
CaiI CAGNNNCTG 1 cut(s) 1679
CciI TCATGA 1 cut(s) 354
CfoI GCGC 1 cut(s) 317
Cfr10I RCCGGY 1 cut(s) 1315
Cfr13I GGNCC 7 cut(s) 289, 326, 1103, 1313, 1326, 1596, 1838
CpoI CGGWCCG 1 cut(s) 1838
CseI GACGC 2 cut(s) 587, 1613
Csp6I GTAC 5 cut(s) 383, 1669, 1697, 2077, 2536
CspCI CAANNNNNGTGG 4 cut(s) 211, 246, 987, 1022
CspI CGGWCCG 1 cut(s) 1838
CviAII CATG 5 cut(s) 253, 355, 408, 706, 1722
CviQI GTAC 5 cut(s) 383, 1669, 1697, 2077, 2536
DrdI GACNNNNNNGTC 1 cut(s) 1757
DriI GACNNNNNGTC 1 cut(s) 2629
DseDI GACNNNNNNGTC 1 cut(s) 1757
EaeI YGGCCR 3 cut(s) 489, 1002, 2523
Eam1104I CTCTTC 4 cut(s) 420, 942, 1218, 2758
Eam1105I GACNNNNNGTC 1 cut(s) 2629
EarI CTCTTC 4 cut(s) 420, 942, 1218, 2758
Ecl136II GAGCTC 1 cut(s) 1165
Eco130I CCWWGG 3 cut(s) 252, 285, 1739
Eco147I AGGCCT 1 cut(s) 272
Eco24I GRGCYC 1 cut(s) 1167
Eco31I GGTCTC 2 cut(s) 1096, 1240
Eco47I GGWCC 3 cut(s) 289, 1103, 1838
Eco53kI GAGCTC 1 cut(s) 1165
Eco57I CTGAAG 1 cut(s) 1038
Eco81I CCTNAGG 1 cut(s) 627
Eco88I CYCGRG 1 cut(s) 2779
Eco91I GGTNACC 1 cut(s) 1759
EcoICRI GAGCTC 1 cut(s) 1165
EcoO109I RGGNCCY 1 cut(s) 1596
EcoO65I GGTNACC 1 cut(s) 1759
EcoRI GAATTC 2 cut(s) 545, 2242
EcoRII CCWGG 2 cut(s) 267, 471
EcoT14I CCWWGG 3 cut(s) 252, 285, 1739
EcoT38I GRGCYC 1 cut(s) 1167
ErhI CCWWGG 3 cut(s) 252, 285, 1739
FaeI CATG 5 cut(s) 256, 358, 411, 709, 1725
FalI AAGNNNNNCTT 8 cut(s) 1397, 1429, 1485, 1517, 2217, 2249, 2755, 2787
FaqI GGGAC 2 cut(s) 1093, 2200
FatI CATG 5 cut(s) 252, 354, 407, 705, 1721
FauNDI CATATG 2 cut(s) 976, 2637
FbaI TGATCA 2 cut(s) 643, 1039
FblI GTMKAC 2 cut(s) 1578, 1587
Fnu4HI GCNGC 5 cut(s) 282, 489, 832, 1178, 2726
FokI GGATG 6 cut(s) 409, 454, 1029, 1442, 2257, 2339
FriOI GRGCYC 1 cut(s) 1167
Fsp4HI GCNGC 5 cut(s) 282, 489, 832, 1178, 2726
FspBI CTAG 3 cut(s) 18, 744, 1181
GlaI GCGC 1 cut(s) 316
GluI GCNGC 5 cut(s) 282, 489, 832, 1178, 2726
GsuI CTGGAG 2 cut(s) 1536, 1701
HaeII RGCGCY 1 cut(s) 318
HaeIII GGCC 9 cut(s) 272, 328, 491, 1004, 1315, 1327, 1598, 2216, 2525
HapII CCGG 5 cut(s) 1152, 1316, 1329, 1593, 2735
HgaI GACGC 2 cut(s) 587, 1613
HhaI GCGC 1 cut(s) 317
Hin1I GRCGYC 1 cut(s) 1200
Hin1II CATG 5 cut(s) 256, 358, 411, 709, 1725
Hin6I GCGC 1 cut(s) 315
HinP1I GCGC 1 cut(s) 315
HincII GTYRAC 1 cut(s) 1822
HindII GTYRAC 1 cut(s) 1822
HindIII AAGCTT 1 cut(s) 597
HpaII CCGG 5 cut(s) 1152, 1316, 1329, 1593, 2735
HphI GGTGA 7 cut(s) 1330, 1753, 1838, 1927, 2307, 2664, 2798
Hpy166II GTNNAC 9 cut(s) 538, 703, 1579, 1588, 1671, 1822, 2102, 2672, 2789
Hpy8I GTNNAC 9 cut(s) 538, 703, 1579, 1588, 1671, 1822, 2102, 2672, 2789
Hpy99I CGWCG 1 cut(s) 1294
HpyAV CCTTC 6 cut(s) 514, 548, 761, 928, 1903, 2843
HpyCH4III ACNGT 8 cut(s) 1103, 1478, 1668, 1904, 2011, 2019, 2032, 2742
HpyCH4IV ACGT 3 cut(s) 591, 1200, 1289
HpyF10VI GCNNNNNNNGC 8 cut(s) 278, 488, 667, 831, 971, 1604, 2460, 2492
HpySE526I ACGT 3 cut(s) 591, 1200, 1289
Hsp92I GRCGYC 1 cut(s) 1200
Hsp92II CATG 5 cut(s) 256, 358, 411, 709, 1725
HspAI GCGC 1 cut(s) 315
Kpn2I TCCGGA 1 cut(s) 2734
KpnI GGTACC 2 cut(s) 1700, 2080
Ksp22I TGATCA 2 cut(s) 643, 1039
LmnI GCTCC 3 cut(s) 658, 867, 1743
Lsp1109I GCAGC 3 cut(s) 293, 843, 1189
LweI GCATC 4 cut(s) 669, 1371, 1420, 2207
MaeI CTAG 3 cut(s) 18, 744, 1181
MaeII ACGT 3 cut(s) 591, 1200, 1289
MaeIII GTNAC 7 cut(s) 1451, 1472, 1621, 1759, 2032, 2165, 2353
MbiI CCGCTC 1 cut(s) 2784
MflI RGATCY 3 cut(s) 1441, 2047, 2419
MhlI GDGCHC 3 cut(s) 1167, 2090, 2717
MlsI TGGCCA 1 cut(s) 2525
MluNI TGGCCA 1 cut(s) 2525
MlyI GAGTC 5 cut(s) 357, 458, 1685, 1827, 2558
MmeI TCCRAC 2 cut(s) 1391, 2466
Mox20I TGGCCA 1 cut(s) 2525
MroI TCCGGA 1 cut(s) 2734
MroXI GAANNNNTTC 2 cut(s) 1412, 1497
MscI TGGCCA 1 cut(s) 2525
MslI CAYNNNNRTG 5 cut(s) 533, 1400, 1724, 2093, 2519
Msp20I TGGCCA 1 cut(s) 2525
MspCI CTTAAG 2 cut(s) 1115, 1502
MspI CCGG 5 cut(s) 1152, 1316, 1329, 1593, 2735
MspR9I CCNGG 4 cut(s) 269, 473, 1329, 1594
Mva1269I GAATGC 2 cut(s) 1395, 2656
MvaI CCWGG 2 cut(s) 269, 473
MvnI CGCG 3 cut(s) 825, 1836, 2728
MwoI GCNNNNNNNGC 8 cut(s) 278, 488, 667, 831, 971, 1604, 2460, 2492
NciI CCSGG 2 cut(s) 1329, 1594
NcoI CCATGG 1 cut(s) 252
NdeI CATATG 2 cut(s) 976, 2637
NlaIII CATG 5 cut(s) 256, 358, 411, 709, 1725
NlaIV GGNNCC 6 cut(s) 869, 1314, 1597, 1698, 1861, 2078
NmuCI GTSAC 3 cut(s) 1759, 2165, 2353
NspI RCATGY 2 cut(s) 411, 709
NspV TTCGAA 2 cut(s) 1127, 1491
OliI CACNNNNGTG 2 cut(s) 1724, 2093
PaeR7I CTCGAG 1 cut(s) 2779
PagI TCATGA 1 cut(s) 354
PceI AGGCCT 1 cut(s) 272
PcsI WCGNNNNNNNCGW 2 cut(s) 230, 683
PctI GAATGC 2 cut(s) 1395, 2656
PdmI GAANNNNTTC 2 cut(s) 1412, 1497
PflMI CCANNNNNTGG 2 cut(s) 1256, 1869
PkrI GCNGC 5 cut(s) 283, 490, 833, 1179, 2727
Ple19I CGATCG 1 cut(s) 1050
PleI GAGTC 5 cut(s) 357, 458, 1684, 1826, 2558
PpsI GAGTC 5 cut(s) 357, 458, 1684, 1826, 2558
PsiI TTATAA 1 cut(s) 666
Psp124BI GAGCTC 1 cut(s) 1167
Psp6I CCWGG 2 cut(s) 267, 471
PspEI GGTNACC 1 cut(s) 1759
PspGI CCWGG 2 cut(s) 267, 471
PspN4I GGNNCC 6 cut(s) 869, 1314, 1597, 1698, 1861, 2078
PspPI GGNCC 7 cut(s) 289, 326, 1103, 1313, 1326, 1596, 1838
PstI CTGCAG 1 cut(s) 283
PstNI CAGNNNCTG 1 cut(s) 1679
PsuI RGATCY 3 cut(s) 1441, 2047, 2419
PvuI CGATCG 1 cut(s) 1050
RsaI GTAC 5 cut(s) 384, 1670, 1698, 2078, 2537
RsaNI GTAC 5 cut(s) 383, 1669, 1697, 2077, 2536
RseI CAYNNNNRTG 5 cut(s) 533, 1400, 1724, 2093, 2519
Rsr2I CGGWCCG 1 cut(s) 1838
RsrII CGGWCCG 1 cut(s) 1838
SacI GAGCTC 1 cut(s) 1167
SatI GCNGC 5 cut(s) 282, 489, 832, 1178, 2726
Sau96I GGNCC 7 cut(s) 289, 326, 1103, 1313, 1326, 1596, 1838
SchI GAGTC 5 cut(s) 357, 458, 1685, 1827, 2558
ScrFI CCNGG 4 cut(s) 269, 473, 1329, 1594
SduI GDGCHC 3 cut(s) 1167, 2090, 2717
SfaNI GCATC 4 cut(s) 669, 1371, 1420, 2207
SfcI CTRYAG 1 cut(s) 279
Sfr274I CTCGAG 1 cut(s) 2779
SfuI TTCGAA 2 cut(s) 1127, 1491
SinI GGWCC 3 cut(s) 289, 1103, 1838
SlaI CTCGAG 1 cut(s) 2779
SmiMI CAYNNNNRTG 5 cut(s) 533, 1400, 1724, 2093, 2519
SmlI CTYRAG 7 cut(s) 653, 1115, 1502, 1703, 2335, 2682, 2779
SmoI CTYRAG 7 cut(s) 653, 1115, 1502, 1703, 2335, 2682, 2779
SseBI AGGCCT 1 cut(s) 272
SsiI CCGC 7 cut(s) 488, 825, 1033, 1836, 1841, 2726, 2784
SspI AATATT 3 cut(s) 561, 1210, 2071
SspMI CTAG 3 cut(s) 18, 744, 1181
SstI GAGCTC 1 cut(s) 1167
StuI AGGCCT 1 cut(s) 272
StyD4I CCNGG 4 cut(s) 267, 471, 1327, 1592
StyI CCWWGG 3 cut(s) 252, 285, 1739
TaaI ACNGT 8 cut(s) 1103, 1478, 1668, 1904, 2011, 2019, 2032, 2742
TaiI ACGT 3 cut(s) 594, 1203, 1292
TaqI TCGA 8 cut(s) 459, 884, 983, 1127, 1337, 1491, 1653, 2780
TaqII GACCGA 1 cut(s) 2720
TauI GCSGC 2 cut(s) 491, 2728
TscAI CASTG 4 cut(s) 994, 1197, 1407, 1771
TseFI GTSAC 3 cut(s) 1759, 2165, 2353
TseI GCWGC 3 cut(s) 281, 831, 1177
Tsp45I GTSAC 3 cut(s) 1759, 2165, 2353
TspGWI ACGGA 4 cut(s) 1389, 1510, 2339, 2570
TspRI CASTG 4 cut(s) 994, 1197, 1407, 1771
Van91I CCANNNNNTGG 2 cut(s) 1256, 1869
Vha464I CTTAAG 2 cut(s) 1115, 1502
VpaK11BI GGWCC 3 cut(s) 289, 1103, 1838
XceI RCATGY 2 cut(s) 411, 709
XcmI CCANNNNNNNNNTGG 1 cut(s) 2257
XhoI CTCGAG 1 cut(s) 2779
XmiI GTMKAC 2 cut(s) 1578, 1587
XmnI GAANNNNTTC 2 cut(s) 1412, 1497
XspI CTAG 3 cut(s) 18, 744, 1181
ZraI GACGTC 1 cut(s) 1201
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.