FvH4_2g11310

Glutamate receptor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0000051
Physical Location & Seq
Forward (+)
9833067 .. 9837191
4125 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g11310.t1

Sequence Viewer

Length: 2073 bp
ATGACGAAGAGGATGGCTACATCAAGCTTGGTCATTTCTTCCCTCGTGTTTTTTCTATCTTCAAGTTTTGTGTTGGTGATGGGACAGAAGACGAGTGTGTCAGTGAATGTTGGTGTGATTCTTGATGACCTTGAGTCTGTAAGTTCCAAAGTTAGGCTGAGCTGCATCGAAATGGCCATCTCGGATTTTTATAGCTCTCGTGGTAACAACACTCGAACGAGGCTGGTTTTGAGCATTAGGGACTCCAGAGGTCATGTTGTCGAAGCCGCTGCTGCAGCTGTGGACCTCATAAAGAATGTTCAAGTGCAAGCAATCTTGGGACCGAAATCATCCATGCAAACCAATTTTGTAATTGATCTTGGAGAAAAAGCACGAGTTCCCATAATCTCATTTTCAGCAACAAGTCCTTCCCTCACTTCCTTTCCAAGTACATACTTTTACCGAGCTGCACAAACCGATTCCTCTCAAGTCAAAGCCGTAGCGGCAATTATCAAAGCTTTTGGTTGGAGAGAAGCTGTGCCGATCTATATTGACAATGAGTACGGCAACGGAGTATTACCATACTTGATCGATGCCTTGCAGACTGTTCAAGCTCGTGTCCCTTATCGAAGTTCCATTCCCACGTCTGCAACTGATGATCAAATTGAAAAAGAGCTTTACAAGTTGATGACAATGCAAACTAGAGTCTTCATTGTGCATATGCCTGGCCCTCTTGGCTCTCGGCTTTTTGCTAAGGTACAAAAGCTAGGAATGATGAATGAAGGCTATGTATGGATCATGACAGATGGGTTAAGCAATCTTCTGAGTTCAACAAATGCTTCAGTCATTAGTTCAATGCAAGGCGCGTTAGGGGTGAGGACTTATGTGCCGAAAACAAAAGAACTGATCACTTTTAGGGATCAATGGAAAAAGCAGTTCCACCAACAAAATCCAAACATCATCGATGTTGAACTAGATGTTGTTGCACTTTGGGCATATGATGCTGCTTATGCATTAGCCATGGCAGTTGAAGAACTTGGGACTGCAAGCTTTGTCTACCAAACCACCATTTCTTCCACAACCTCATCAGCAGATTTGGAGACTTTGGGGGTATCTCAAAATGGTTATCAGCTTAGCCGATCCTTGGCAAAGACTAAATTTACAGGCCTTGCTGGAAATTTCAGTTTTGATAATGGACAGTTACAATCTTCCGTGTTTGAAATATTGAATGTGAATGGTGCTGGAGCAAGACCAATTGGGTTTTGGACACCCGAGAATGGACTTGTGAGAAACCTGATCATTAATTCGACAGACACATCTGTACCGAATTTGGGGTTGGTCATGTGGCCGGGAGAACATGTCTCCATCCCTAAGGGATGGGAGATCCCGACAAACGGAAAGATACTAAAAGTTGGTGTTCCAGTGAAGAATGGTTTCACAGAGTTTGTGAAGGTGGTACATGATAATGGCACTAATACTACAACAGATGTTATTACTGGATTCTGCATCGACGTCTTTAATGCTGTAATGGAAGGACTACCTTACGCTGTCCCTTATGAGTTTATTCCCTTTGCATATTCTAATGGCAGCTCTGCCGGCACTTATGATGATTTGGTCTATCATGTTTTTCTTGGGGAATTTGATGCTTTAGCAGCAGATTCAACAATTAGGGCAAACAGGTCACTATATGTGGACTTTACAATGCCATATACTGAATCCGGTGTAGTAATGGTGGTGCCGATGAAAGATAAAAACCGGATTGAAAATGCATGGATTTTCTTGAAGCCTTTAACATGGGACTTGTGGCTTGCTAGTTTTTGTTCCTTTGTCTTCGTTGGTTTTGTGGTTTGGCTTTTGGAACACCGAGTAAATGAAGATTTTCGCGGCCCTCGCACACATCAAGTTGGCACAGGCCTTTGGTTCTCTTTCTCAACAATGGTTTTTGCACAGCGGGAGAGAGTGGTTAGCAACTTGGCTAGGTTTGTGGTGATAGTGTGGGTATTTGTGGTGCTCATATTGACTCAAAGCTACACAGCGAGTCTGACTTCACTGCTAACGGGGTGCAAAAGCTTGAGCCAACTTATACAAATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

691

Amino Acids

76.11

Weight (kDa)

6.49

Isoelectric Point (pI)

27.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peripla_BP_6 PF13458 35 - 342 6.8e-19 Periplasmic binding protein
ANF_receptor PF01094 53 - 406 1.6e-86 Receptor family ligand binding region
Lig_chan-Glu_bd PF10613 483 - 573 2e-07 Ligated ion channel L-glutamate- and glycine-binding site
Lig_chan PF00060 591 - 682 6.7e-25 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 97
AatII GACGTC 1 cut(s) 1494
AccB1I GGYRCC 1 cut(s) 1714
AccI GTMKAC 1 cut(s) 1035
AccII CGCG 2 cut(s) 845, 1863
AciI CCGC 4 cut(s) 267, 482, 1863, 1930
AclWI GGATC 4 cut(s) 782, 906, 1113, 1357
AcoI YGGCCR 2 cut(s) 174, 1325
AcsI RAATTY 4 cut(s) 1136, 1156, 1306, 1616
AcuI CTGAAG 1 cut(s) 804
AcyI GRCGYC 1 cut(s) 1491
AfaI GTAC 5 cut(s) 430, 542, 738, 1302, 1437
AfiI CCNNNNNNNGG 5 cut(s) 153, 1123, 1256, 1310, 1373
AflIII ACRYGT 1 cut(s) 1336
AhdI GACNNNNNGTC 1 cut(s) 133
AjiI CACGTC 1 cut(s) 624
AjnI CCWGG 1 cut(s) 703
AjuI GAANNNNNNNTTGG 2 cut(s) 1298, 1330
Alw21I GWGCWC 1 cut(s) 1992
Alw26I GTCTC 2 cut(s) 1073, 1345
AlwI GGATC 4 cut(s) 782, 906, 1113, 1357
Ama87I CYCGRG 1 cut(s) 1250
AoxI GGCC 6 cut(s) 174, 706, 1144, 1325, 1864, 1891
ApeKI GCWGC 8 cut(s) 162, 269, 272, 275, 446, 983, 1566, 1631
ApoI RAATTY 4 cut(s) 1136, 1156, 1306, 1616
AseI ATTAAT 1 cut(s) 1281
Asp700I GAANNNNTTC 2 cut(s) 1412, 1857
AspLEI GCGC 1 cut(s) 845
AspS9I GGNCC 4 cut(s) 283, 320, 707, 1865
AsuC2I CCSGG 1 cut(s) 1329
AsuHPI GGTGA 3 cut(s) 88, 865, 1978
AvaI CYCGRG 1 cut(s) 1250
AvaII GGWCC 2 cut(s) 283, 320
AxyI CCTNAGG 1 cut(s) 1350
BaeI ACNNNNGTAYC 2 cut(s) 1284, 1317
BalI TGGCCA 1 cut(s) 176
BanI GGYRCC 1 cut(s) 1714
BauI CACGAG 4 cut(s) 44, 198, 372, 594
BbsI GAAGAC 3 cut(s) 95, 679, 1801
Bbv12I GWGCWC 1 cut(s) 1992
BbvI GCAGC 8 cut(s) 149, 256, 259, 287, 433, 970, 1578, 1643
BccI CCATC 6 cut(s) 7, 73, 185, 779, 1350, 1352
BceAI ACGGC 2 cut(s) 461, 559
BcgI CGANNNNNNTGC 2 cut(s) 251, 285
BciT130I CCWGG 1 cut(s) 705
BclI TGATCA 3 cut(s) 637, 885, 1275
BcnI CCSGG 1 cut(s) 1329
BcoDI GTCTC 2 cut(s) 1073, 1345
BfaI CTAG 5 cut(s) 681, 746, 953, 1791, 1956
BfmI CTRYAG 1 cut(s) 273
BglI GCCNNNNNGGC 2 cut(s) 482, 714
BlpI GCTNAGC 2 cut(s) 158, 1112
Bme1390I CCNGG 2 cut(s) 705, 1329
Bme18I GGWCC 2 cut(s) 283, 320
BmeRI GACNNNNNGTC 1 cut(s) 133
BmeT110I CYCGRG 1 cut(s) 1250
BmgBI CACGTC 1 cut(s) 624
BmgT120I GGNCC 4 cut(s) 283, 320, 707, 1865
BmiI GGNNCC 2 cut(s) 321, 1716
BmrFI CCNGG 2 cut(s) 705, 1329
BmsI GCATC 5 cut(s) 174, 562, 970, 1494, 1612
BpiI GAAGAC 3 cut(s) 95, 679, 1801
BpmI CTGGAG 2 cut(s) 229, 1242
Bpu10I CCTNAGC 1 cut(s) 732
Bpu1102I GCTNAGC 2 cut(s) 158, 1112
BpuEI CTTGAG 3 cut(s) 152, 450, 2071
BpuMI CCSGG 1 cut(s) 1329
Bsa29I ATCGAT 2 cut(s) 570, 942
BsaHI GRCGYC 1 cut(s) 1491
BsaJI CCNNGG 2 cut(s) 999, 1122
BsaWI WCCGGW 2 cut(s) 1697, 1734
BsaXI ACNNNNNCTCC 2 cut(s) 1323, 1353
Bsc4I CCNNNNNNNGG 5 cut(s) 153, 1123, 1256, 1310, 1373
Bse118I RCCGGY 1 cut(s) 1574
Bse1I ACTGG 2 cut(s) 1400, 1480
Bse21I CCTNAGG 1 cut(s) 1350
BseBI CCWGG 1 cut(s) 705
BseCI ATCGAT 2 cut(s) 570, 942
BseDI CCNNGG 2 cut(s) 999, 1122
BseGI GGATG 4 cut(s) 18, 329, 1344, 1361
BseLI CCNNNNNNNGG 5 cut(s) 153, 1123, 1256, 1310, 1373
BseMII CTCAG 2 cut(s) 149, 794
BseNI ACTGG 2 cut(s) 1400, 1480
BseXI GCAGC 8 cut(s) 149, 256, 259, 287, 433, 970, 1578, 1643
BsgI GTGCAG 1 cut(s) 432
Bsh1236I CGCG 2 cut(s) 845, 1863
BshFI GGCC 6 cut(s) 176, 708, 1146, 1327, 1866, 1893
BshNI GGYRCC 1 cut(s) 1714
BshVI ATCGAT 2 cut(s) 570, 942
BsiHKAI GWGCWC 1 cut(s) 1992
BsiHKCI CYCGRG 1 cut(s) 1250
BsiSI CCGG 4 cut(s) 1328, 1575, 1698, 1735
BslFI GGGAC 7 cut(s) 96, 254, 333, 584, 1033, 1514, 1790
BslI CCNNNNNNNGG 5 cut(s) 153, 1123, 1256, 1310, 1373
BsmAI GTCTC 2 cut(s) 1073, 1345
BsmFI GGGAC 7 cut(s) 96, 254, 333, 584, 1033, 1514, 1790
BsnI GGCC 6 cut(s) 176, 708, 1146, 1327, 1866, 1893
BsoBI CYCGRG 1 cut(s) 1250
Bsp1286I GDGCHC 1 cut(s) 1992
Bsp1720I GCTNAGC 2 cut(s) 158, 1112
Bsp19I CCATGG 1 cut(s) 999
BspACI CCGC 4 cut(s) 267, 482, 1863, 1930
BspANI GGCC 6 cut(s) 176, 708, 1146, 1327, 1866, 1893
BspCNI CTCAG 2 cut(s) 150, 795
BspDI ATCGAT 2 cut(s) 570, 942
BspFNI CGCG 2 cut(s) 845, 1863
BspHI TCATGA 1 cut(s) 777
BspLI GGNNCC 2 cut(s) 321, 1716
BspMAI CTGCAG 1 cut(s) 277
BspPI GGATC 4 cut(s) 782, 906, 1113, 1357
BspT107I GGYRCC 1 cut(s) 1714
BsrFI RCCGGY 1 cut(s) 1574
BsrI ACTGG 2 cut(s) 1400, 1480
BssAI RCCGGY 1 cut(s) 1574
BssECI CCNNGG 2 cut(s) 999, 1122
BssNI GRCGYC 1 cut(s) 1491
BssSI CACGAG 4 cut(s) 44, 198, 372, 594
BssT1I CCWWGG 2 cut(s) 999, 1122
Bst2BI CACGAG 4 cut(s) 44, 198, 372, 594
Bst2UI CCWGG 1 cut(s) 705
Bst4CI ACNGT 2 cut(s) 586, 1179
Bst6I CTCTTC 1 cut(s) 2
BstACI GRCGYC 1 cut(s) 1491
BstAPI GCANNNNNTGC 1 cut(s) 980
BstC8I GCNNGC 4 cut(s) 309, 1027, 1576, 1788
BstDEI CTNAG 5 cut(s) 158, 732, 803, 1112, 1350
BstDSI CCRYGG 1 cut(s) 999
BstF5I GGATG 4 cut(s) 18, 329, 1344, 1361
BstFNI CGCG 2 cut(s) 845, 1863
BstHHI GCGC 1 cut(s) 845
BstMAI GTCTC 2 cut(s) 1073, 1345
BstNI CCWGG 1 cut(s) 705
BstNSI RCATGY 1 cut(s) 1340
BstSCI CCNGG 2 cut(s) 703, 1327
BstSFI CTRYAG 1 cut(s) 273
BstUI CGCG 2 cut(s) 845, 1863
BstV1I GCAGC 8 cut(s) 149, 256, 259, 287, 433, 970, 1578, 1643
BstV2I GAAGAC 3 cut(s) 95, 679, 1801
BstX2I RGATCY 1 cut(s) 1362
BstYI RGATCY 1 cut(s) 1362
Bsu15I ATCGAT 2 cut(s) 570, 942
Bsu36I CCTNAGG 1 cut(s) 1350
BsuRI GGCC 6 cut(s) 176, 708, 1146, 1327, 1866, 1893
BsuTUI ATCGAT 2 cut(s) 570, 942
BtgI CCRYGG 1 cut(s) 999
BtrI CACGTC 1 cut(s) 624
BtsCI GGATG 4 cut(s) 18, 329, 1344, 1361
BtsI GCAGTG 1 cut(s) 2027
BtsIMutI CAGTG 3 cut(s) 108, 1407, 2027
Cac8I GCNNGC 4 cut(s) 309, 1027, 1576, 1788
CciI TCATGA 1 cut(s) 777
CfoI GCGC 1 cut(s) 845
Cfr10I RCCGGY 1 cut(s) 1574
Cfr13I GGNCC 4 cut(s) 283, 320, 707, 1865
ClaI ATCGAT 2 cut(s) 570, 942
Csp6I GTAC 5 cut(s) 429, 541, 737, 1301, 1436
CviQI GTAC 5 cut(s) 429, 541, 737, 1301, 1436
DdeI CTNAG 5 cut(s) 158, 732, 803, 1112, 1350
DrdI GACNNNNNNGTC 1 cut(s) 97
DriI GACNNNNNGTC 1 cut(s) 133
DseDI GACNNNNNNGTC 1 cut(s) 97
EaeI YGGCCR 2 cut(s) 174, 1325
Eam1104I CTCTTC 1 cut(s) 2
Eam1105I GACNNNNNGTC 1 cut(s) 133
EarI CTCTTC 1 cut(s) 2
Eco130I CCWWGG 2 cut(s) 999, 1122
Eco147I AGGCCT 2 cut(s) 1146, 1893
Eco47I GGWCC 2 cut(s) 283, 320
Eco57I CTGAAG 1 cut(s) 804
Eco81I CCTNAGG 1 cut(s) 1350
Eco88I CYCGRG 1 cut(s) 1250
EcoRII CCWGG 1 cut(s) 703
EcoT14I CCWWGG 2 cut(s) 999, 1122
EcoT22I ATGCAT 2 cut(s) 994, 1750
ErhI CCWWGG 2 cut(s) 999, 1122
FaqI GGGAC 7 cut(s) 96, 254, 333, 584, 1033, 1514, 1790
FauI CCCGC 1 cut(s) 1923
FauNDI CATATG 2 cut(s) 699, 976
FbaI TGATCA 3 cut(s) 637, 885, 1275
FblI GTMKAC 1 cut(s) 1035
FokI GGATG 4 cut(s) 25, 316, 1331, 1368
FspBI CTAG 5 cut(s) 681, 746, 953, 1791, 1956
GlaI GCGC 1 cut(s) 844
GsuI CTGGAG 2 cut(s) 229, 1242
HaeIII GGCC 6 cut(s) 176, 708, 1146, 1327, 1866, 1893
HapII CCGG 4 cut(s) 1328, 1575, 1698, 1735
HhaI GCGC 1 cut(s) 845
Hin1I GRCGYC 1 cut(s) 1491
Hin6I GCGC 1 cut(s) 843
HinP1I GCGC 1 cut(s) 843
HindIII AAGCTT 4 cut(s) 25, 495, 1027, 2047
HpaII CCGG 4 cut(s) 1328, 1575, 1698, 1735
HphI GGTGA 3 cut(s) 88, 865, 1978
Hpy166II GTNNAC 3 cut(s) 283, 1036, 1672
Hpy188I TCNGA 3 cut(s) 184, 804, 2022
Hpy188III TCNNGA 5 cut(s) 122, 246, 778, 1366, 1759
Hpy8I GTNNAC 3 cut(s) 283, 1036, 1672
Hpy99I CGWCG 1 cut(s) 1493
HpyAV CCTTC 4 cut(s) 417, 755, 1423, 1505
HpyCH4III ACNGT 2 cut(s) 586, 1179
HpyCH4IV ACGT 2 cut(s) 623, 1491
HpyF3I CTNAG 5 cut(s) 158, 732, 803, 1112, 1350
HpySE526I ACGT 2 cut(s) 623, 1491
Hsp92I GRCGYC 1 cut(s) 1491
HspAI GCGC 1 cut(s) 843
KroI GCCGGC 1 cut(s) 1574
KroNI GCCGGC 1 cut(s) 1576
Ksp22I TGATCA 3 cut(s) 637, 885, 1275
LmnI GCTCC 1 cut(s) 1223
Lsp1109I GCAGC 8 cut(s) 149, 256, 259, 287, 433, 970, 1578, 1643
LweI GCATC 5 cut(s) 174, 562, 970, 1494, 1612
MaeI CTAG 5 cut(s) 681, 746, 953, 1791, 1956
MaeII ACGT 2 cut(s) 623, 1491
MaeIII GTNAC 3 cut(s) 203, 1179, 1659
MfeI CAATTG 1 cut(s) 1233
MflI RGATCY 1 cut(s) 1362
MhlI GDGCHC 1 cut(s) 1992
MlsI TGGCCA 1 cut(s) 176
MluNI TGGCCA 1 cut(s) 176
MlyI GAGTC 5 cut(s) 143, 236, 693, 1993, 2026
MmeI TCCRAC 1 cut(s) 485
Mox20I TGGCCA 1 cut(s) 176
Mph1103I ATGCAT 2 cut(s) 994, 1750
MroNI GCCGGC 1 cut(s) 1574
MroXI GAANNNNTTC 2 cut(s) 1412, 1857
MscI TGGCCA 1 cut(s) 176
MseI TTAA 4 cut(s) 791, 1281, 1497, 1769
MslI CAYNNNNRTG 2 cut(s) 170, 1443
Msp20I TGGCCA 1 cut(s) 176
MspA1I CMGCKG 3 cut(s) 269, 278, 1930
MspI CCGG 4 cut(s) 1328, 1575, 1698, 1735
MspR9I CCNGG 2 cut(s) 705, 1329
MunI CAATTG 1 cut(s) 1233
MvaI CCWGG 1 cut(s) 705
MvnI CGCG 2 cut(s) 845, 1863
NaeI GCCGGC 1 cut(s) 1576
NciI CCSGG 1 cut(s) 1329
NcoI CCATGG 1 cut(s) 999
NdeI CATATG 2 cut(s) 699, 976
NgoMIV GCCGGC 1 cut(s) 1574
NlaIV GGNNCC 2 cut(s) 321, 1716
NmeAIII GCCGAG 1 cut(s) 700
NmuCI GTSAC 1 cut(s) 1659
NsiI ATGCAT 2 cut(s) 994, 1750
NspI RCATGY 1 cut(s) 1340
PagI TCATGA 1 cut(s) 777
PceI AGGCCT 2 cut(s) 1146, 1893
PciI ACATGT 1 cut(s) 1336
PdiI GCCGGC 1 cut(s) 1576
PdmI GAANNNNTTC 2 cut(s) 1412, 1857
PfeI GAWTC 5 cut(s) 118, 458, 1479, 1637, 1694
PleI GAGTC 5 cut(s) 142, 236, 692, 1993, 2025
PpsI GAGTC 5 cut(s) 142, 236, 692, 1993, 2025
PscI ACATGT 1 cut(s) 1336
PshBI ATTAAT 1 cut(s) 1281
Psp6I CCWGG 1 cut(s) 703
PspGI CCWGG 1 cut(s) 703
PspN4I GGNNCC 2 cut(s) 321, 1716
PspPI GGNCC 4 cut(s) 283, 320, 707, 1865
PstI CTGCAG 1 cut(s) 277
PsuI RGATCY 1 cut(s) 1362
PvuII CAGCTG 1 cut(s) 278
RsaI GTAC 5 cut(s) 430, 542, 738, 1302, 1437
RsaNI GTAC 5 cut(s) 429, 541, 737, 1301, 1436
RseI CAYNNNNRTG 2 cut(s) 170, 1443
SaqAI TTAA 4 cut(s) 791, 1281, 1497, 1769
Sau96I GGNCC 4 cut(s) 283, 320, 707, 1865
SchI GAGTC 5 cut(s) 143, 236, 693, 1993, 2026
ScrFI CCNGG 2 cut(s) 705, 1329
SduI GDGCHC 1 cut(s) 1992
SfaNI GCATC 5 cut(s) 174, 562, 970, 1494, 1612
SfcI CTRYAG 1 cut(s) 273
SinI GGWCC 2 cut(s) 283, 320
SmiMI CAYNNNNRTG 2 cut(s) 170, 1443
SmlI CTYRAG 3 cut(s) 131, 465, 2050
SmoI CTYRAG 3 cut(s) 131, 465, 2050
SseBI AGGCCT 2 cut(s) 1146, 1893
SsiI CCGC 4 cut(s) 267, 482, 1863, 1930
SspI AATATT 1 cut(s) 1203
SspMI CTAG 5 cut(s) 681, 746, 953, 1791, 1956
StuI AGGCCT 2 cut(s) 1146, 1893
StyD4I CCNGG 2 cut(s) 703, 1327
StyI CCWWGG 2 cut(s) 999, 1122
TaaI ACNGT 2 cut(s) 586, 1179
TaiI ACGT 2 cut(s) 626, 1494
TaqI TCGA 8 cut(s) 168, 214, 261, 570, 607, 942, 1286, 1488
TaqII GACCGA 1 cut(s) 337
TatI WGTACW 1 cut(s) 428
TauI GCSGC 3 cut(s) 269, 485, 1866
TfiI GAWTC 5 cut(s) 118, 458, 1479, 1637, 1694
Tru1I TTAA 4 cut(s) 791, 1281, 1497, 1769
Tru9I TTAA 4 cut(s) 791, 1281, 1497, 1769
TscAI CASTG 3 cut(s) 108, 1407, 2034
TseFI GTSAC 1 cut(s) 1659
TseI GCWGC 8 cut(s) 162, 269, 272, 275, 446, 983, 1566, 1631
Tsp45I GTSAC 1 cut(s) 1659
TspDTI ATGAA 5 cut(s) 679, 770, 774, 1736, 1866
TspGWI ACGGA 3 cut(s) 564, 1180, 1389
TspRI CASTG 3 cut(s) 108, 1407, 2034
VpaK11BI GGWCC 2 cut(s) 283, 320
VspI ATTAAT 1 cut(s) 1281
XapI RAATTY 4 cut(s) 1136, 1156, 1306, 1616
XceI RCATGY 1 cut(s) 1340
XcmI CCANNNNNNNNNTGG 1 cut(s) 1239
XmiI GTMKAC 1 cut(s) 1035
XmnI GAANNNNTTC 2 cut(s) 1412, 1857
XspI CTAG 5 cut(s) 681, 746, 953, 1791, 1956
ZraI GACGTC 1 cut(s) 1492
Zsp2I ATGCAT 2 cut(s) 994, 1750
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.