Rorug06G0332700

Glutamate receptor

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Forward (+)
48543694 .. 48547304
3611 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0332700.1

Sequence Viewer

Length: 2613 bp
ATGGCAATGCTACCGCTGTCAATTACACTACAGGCCTGTTGTTGGGCCTGTGGAACCACTGAATCGTCTAGGCTGACAGCCACTACTCATTATAGAGACAGAAACAAAACTACGCTCGGTTTGGTAAAATTGGACGCGGAGAGAAAGCTAGTTTTTGGAGGATCTGTGCAGAGTCTCACACAAAGTTTGCCGCGGGGTTGTCACTCCAGAGTGCAAGCTACATCAGGAGTTTCTATTGAACCAATGGAGCAGAAGTTTCCCACTGGTACTGAAGAAACGGATAAGGTATCAACTTATCTATTTAGGACAGAAAATGGGGATCTGGTGAATGTGTTTGTTAGAAATAATACTGTCAACTACAGTGTGTATGTTGAAGTTTCATCATTACAATTGTCCAGCAGTGCTGACAGGCTAGTCCTCAGTTGGGGCATGTATAGAGCTGATTCATCCAGTCTCATGCCTTCAGACTTTATCGAAACCCCATTTATAAAGACTTCTTCAGGCAGTTTTACTCTTGAATTGGAGTTTGAGGCTAAACAAACCCCTTTCTATCTCTCATTTATTGTGAAATCTCTGGCAGATGCAAATTTGAGTGGTTTGGAAATAAGAAGCCATAGGAAGACAAATTTCTGTGTCCCAGTTGGTTTTGGTCGAGGTTATCCTACTCCATTGGGTCTTTCCTTTTCTAGTGATGGTTCCATAAACTTTGCCATTTTTTCGAGAAATGCAGAAAGTGTGGTTTTATGCTTGTACGATGACCCCACTGCTCAGAAGCCTGCTCTGGAGCTTGATCTAGATCCATATGTCAATCGATCAGGTGACATATGGCATGCTTCATTTGAAAGTGCATGGACTTTTGTGAGCTATGGCTACAGATTTAAGGGGACCCTTCTGAGAAATACAAATAGCTTCGATGAAGGGGATATTCTTCTGGATCCATATGCTAAGGTCATTGATGAATCTATCCCTAATAATAAAGGAACAGGGTCGAAGTTAGTTGGAAGACTATGTGAGGAACCTGTGTTTGACTGGGATGGTGATGTTCGACCTCACCTGCCAATAGAGAAACTGATGGTTTATCGGTTGAACTTGACACGTTTTACTGAGCACAAGTCTAGTAAGCTACCTACTAATGTAGCAGGTACGTTTTCTGGTTTGACAGAAAAGTTGGATCATTTTAAAGATCTGGGTGTGAATGCAATTTTGTTAGAGCCAATTTTCCCATTTGATGAGGAAAAAGGTCCATATTTCCCTTGCCATTTCTTTTCACCAATGAATTGTTTTGGACCATCCGGAGGCCCTATAGCAACTATCAACTCGATGAAGGAGATGGTGAAAGAGTTTCATGCCAATGGAATAGAGGTCCTACTGGAAGTTGTTTTCACCCATACTGCTGCGGGTGAAGTGCTGCAAGGAATCGACACCTCATCTTATTATCATGCAAGTACAGCTAAGGATTTGGAAGCAAGAAATTCTTTGAATTGTAACCATCCCATTGTGCAGCAAATGGTATTAGATAGTCTTCGATACTGGGTGACTGAGTTTCACGTCGATGGTTTTTGTTTCATAAATGCATCATCTCTGTTACATGGGGTTAACGGTGAATACCAATCTCGCCCACCATTGGTTGAAGCAATTGCTTTTGATCCACTACTGACAAAGACCAAGTTCATTGCAGACTGCTGGGACCCTCATGAAATGGTACCAAAGGAAACTCGTTTTCCTCATTGGAAGAGATGGGCAGAAGTGAATGCAAGATTCTGCAATGATGTAAGAAACTTTTTGAGGGGTGAGGGTCTTCTTAGTGACCTTGCTACACGGCTTTGTGGGAACGGGGACATCTTTTCAGATGGGCGAGGCCCAGCATTCTCTTTCAATTTTATTTCCAGAAATTCTGGTCTTCCTCTTGTGGACCTTGTTAGTTTCAGTGGCAGTGAGTTAGCTTCACAACTGAGTTGGAATTGTGGGGAAGAAGGGCCTACAAGTAAAACTGCTGTACTAGAAAGACGCCTTAAACAAATCCGTAATTTTCTGTTTATCTTGTATCTTTCATTGGGTGTCCCTGTTCTTAACATGGGAGACGAGTGTGGACAATCTTCAGGTGGTTCTCCTGCATACAGTGACAGAAAATCTTTTGACTGGAAGGCAATGGAAACAGGTTTCGCTACTCAAACCACACAATTTATTGCATATTTAAGTTCATTCAGGAGGAGGCGGAGTGATCTTCTTCAGAAGAAGCACTACTTCAAAGAAGAAAATATTGACTGGTATGGAAGTGACCAATCGTTACCGAGGTGGGAAGACCCTCTGTGCAAATTCCTTGCCATGAGGTTGAAGGCAGACCAAGATGAAGTGGAAAACCAATTGACCAACGAATATGCTGATTTAAGGGGTGACTTGTTTGTAGCCTTCAGTGCAGCTGAACAGTCGGAGACTGTTATTCTACCTCCACCCCCAGAAGGTATGGCATGGAGCCGTTTGGTTGACACGGCTCTCCCATTTCCTGGATTTTTCTCAATTGATGGTGAGCCTATCATTGAGCAAATGGAGGGTTTATTTTCTTATGCCATGAAGTCTCACAGTTGTGCTCTTTTTGAAGCCAGAAGATTGTAG

Protein Analysis

870

Amino Acids

97.47

Weight (kDa)

5.33

Isoelectric Point (pI)

45.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CBM_48 PF02922 223 - 315 2.9e-12 Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
Alpha-amylase PF00128 379 - 466 2e-10 Alpha amylase, catalytic domain
ISOA1-3_C PF21156 756 - 836 7.3e-06 Isoamylase 1-3, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 488
AarI CACCTGC 1 cut(s) 1062
AasI GACNNNNNNGTC 1 cut(s) 413
Acc36I ACCTGC 2 cut(s) 1062, 1130
Acc65I GGTACC 1 cut(s) 1702
AccB1I GGYRCC 1 cut(s) 1702
AccB7I CCANNNNNTGG 1 cut(s) 2504
AccII CGCG 2 cut(s) 137, 193
AccIII TCCGGA 1 cut(s) 1292
AciI CCGC 6 cut(s) 14, 137, 191, 193, 1397, 2215
AclWI GGATC 7 cut(s) 169, 327, 791, 929, 942, 1179, 1640
AcsI RAATTY 5 cut(s) 586, 625, 1471, 1891, 2315
AcuI CTGAAG 6 cut(s) 291, 447, 483, 2082, 2213, 2395
AcyI GRCGYC 1 cut(s) 2008
AfaI GTAC 6 cut(s) 268, 752, 1144, 1447, 1704, 1998
AfiI CCNNNNNNNGG 6 cut(s) 42, 424, 1295, 1624, 2459, 2504
AflIII ACRYGT 1 cut(s) 1094
AjiI CACGTC 1 cut(s) 1549
AjnI CCWGG 1 cut(s) 2503
AleI CACNNNNGTG 1 cut(s) 2583
Alw21I GWGCWC 2 cut(s) 1110, 2590
Alw26I GTCTC 6 cut(s) 90, 179, 458, 2073, 2426, 2580
AlwI GGATC 7 cut(s) 169, 327, 791, 929, 942, 1179, 1640
Aor13HI TCCGGA 1 cut(s) 1292
AoxI GGCC 5 cut(s) 33, 45, 1297, 1858, 1976
ApeKI GCWGC 4 cut(s) 1394, 1408, 1501, 2417
ApoI RAATTY 5 cut(s) 586, 625, 1471, 1891, 2315
Asp718I GGTACC 1 cut(s) 1702
AvaII GGWCC 6 cut(s) 885, 1241, 1286, 1363, 1687, 1912
BamHI GGATCC 1 cut(s) 934
BanI GGYRCC 1 cut(s) 1702
BarI GAAGNNNNNNTAC 2 cut(s) 2225, 2257
BbsI GAAGAC 6 cut(s) 626, 1009, 1514, 1790, 1892, 2307
Bbv12I GWGCWC 2 cut(s) 1110, 2590
BbvI GCAGC 4 cut(s) 1381, 1395, 1513, 2429
BceAI ACGGC 3 cut(s) 1835, 2460, 2505
BciT130I CCWGG 1 cut(s) 2505
BcoDI GTCTC 6 cut(s) 90, 179, 458, 2073, 2426, 2580
BfaI CTAG 7 cut(s) 69, 149, 413, 687, 794, 1116, 2000
BfmI CTRYAG 4 cut(s) 29, 358, 871, 1302
BfuAI ACCTGC 2 cut(s) 1062, 1130
BglII AGATCT 1 cut(s) 1183
BisI GCNGC 5 cut(s) 191, 1395, 1409, 1502, 2418
BlsI GCNGC 5 cut(s) 192, 1396, 1410, 1503, 2419
Bme1390I CCNGG 1 cut(s) 2505
Bme18I GGWCC 6 cut(s) 885, 1241, 1286, 1363, 1687, 1912
BmgBI CACGTC 1 cut(s) 1549
BmrFI CCNGG 1 cut(s) 2505
BmrI ACTGGG 3 cut(s) 632, 1039, 1540
BmsI GCATC 2 cut(s) 571, 1583
BmuI ACTGGG 3 cut(s) 632, 1039, 1540
BpiI GAAGAC 6 cut(s) 626, 1009, 1514, 1790, 1892, 2307
BpmI CTGGAG 2 cut(s) 190, 803
Bpu10I CCTNAGC 2 cut(s) 945, 1452
Bsa29I ATCGAT 1 cut(s) 811
BsaBI GATNNNNATC 1 cut(s) 795
BsaHI GRCGYC 1 cut(s) 2008
BsaJI CCNNGG 2 cut(s) 191, 2291
BsaWI WCCGGW 1 cut(s) 1292
BsaXI ACNNNNNCTCC 6 cut(s) 150, 180, 239, 269, 2203, 2233
Bsc4I CCNNNNNNNGG 6 cut(s) 42, 424, 1295, 1624, 2459, 2504
Bse1I ACTGG 8 cut(s) 268, 450, 638, 1034, 1374, 1535, 2144, 2270
Bse3DI GCAATG 4 cut(s) 12, 1671, 1771, 2154
Bse8I GATNNNNATC 1 cut(s) 795
BseAI TCCGGA 1 cut(s) 1292
BseBI CCWGG 1 cut(s) 2505
BseCI ATCGAT 1 cut(s) 811
BseDI CCNNGG 2 cut(s) 191, 2291
BseGI GGATG 4 cut(s) 446, 1039, 1289, 1489
BseJI GATNNNNATC 1 cut(s) 795
BseLI CCNNNNNNNGG 6 cut(s) 42, 424, 1295, 1624, 2459, 2504
BseMI GCAATG 4 cut(s) 12, 1671, 1771, 2154
BseMII CTCAG 6 cut(s) 433, 782, 884, 1095, 1530, 1943
BseNI ACTGG 8 cut(s) 268, 450, 638, 1034, 1374, 1535, 2144, 2270
BseRI GAGGAG 1 cut(s) 2224
BseXI GCAGC 4 cut(s) 1381, 1395, 1513, 2429
BseYI CCCAGC 2 cut(s) 1683, 1861
BsgI GTGCAG 3 cut(s) 188, 1520, 2436
Bsh1236I CGCG 2 cut(s) 137, 193
BshFI GGCC 5 cut(s) 35, 47, 1299, 1860, 1978
BshNI GGYRCC 1 cut(s) 1702
BshVI ATCGAT 1 cut(s) 811
BsiHKAI GWGCWC 2 cut(s) 1110, 2590
BsiSI CCGG 1 cut(s) 1293
BslFI GGGAC 5 cut(s) 620, 898, 1700, 1850, 2045
BslI CCNNNNNNNGG 6 cut(s) 42, 424, 1295, 1624, 2459, 2504
BsmAI GTCTC 6 cut(s) 90, 179, 458, 2073, 2426, 2580
BsmBI CGTCTC 1 cut(s) 2073
BsmFI GGGAC 5 cut(s) 620, 898, 1700, 1850, 2045
BsmI GAATGC 3 cut(s) 1201, 1756, 1865
BsnI GGCC 5 cut(s) 35, 47, 1299, 1860, 1978
Bsp1286I GDGCHC 2 cut(s) 1110, 2590
Bsp13I TCCGGA 1 cut(s) 1292
BspACI CCGC 6 cut(s) 14, 137, 191, 193, 1397, 2215
BspANI GGCC 5 cut(s) 35, 47, 1299, 1860, 1978
BspCNI CTCAG 6 cut(s) 432, 781, 885, 1096, 1531, 1944
BspDI ATCGAT 1 cut(s) 811
BspEI TCCGGA 1 cut(s) 1292
BspFNI CGCG 2 cut(s) 137, 193
BspHI TCATGA 1 cut(s) 1693
BspMI ACCTGC 2 cut(s) 1062, 1130
BspPI GGATC 7 cut(s) 169, 327, 791, 929, 942, 1179, 1640
BspT107I GGYRCC 1 cut(s) 1702
BsrDI GCAATG 4 cut(s) 12, 1671, 1771, 2154
BsrI ACTGG 8 cut(s) 268, 450, 638, 1034, 1374, 1535, 2144, 2270
BssECI CCNNGG 2 cut(s) 191, 2291
BssNI GRCGYC 1 cut(s) 2008
Bst2UI CCWGG 1 cut(s) 2505
Bst4CI ACNGT 7 cut(s) 352, 362, 1601, 2120, 2427, 2437, 2582
Bst6I CTCTTC 1 cut(s) 1727
BstACI GRCGYC 1 cut(s) 2008
BstC8I GCNNGC 3 cut(s) 216, 777, 831
BstDEI CTNAG 9 cut(s) 419, 768, 893, 945, 1104, 1452, 1539, 1802, 1952
BstDSI CCRYGG 1 cut(s) 191
BstF5I GGATG 4 cut(s) 446, 1039, 1289, 1489
BstFNI CGCG 2 cut(s) 137, 193
BstMAI GTCTC 6 cut(s) 90, 179, 458, 2073, 2426, 2580
BstMWI GCNNNNNNNGC 2 cut(s) 1448, 2414
BstNI CCWGG 1 cut(s) 2505
BstNSI RCATGY 2 cut(s) 433, 833
BstSCI CCNGG 1 cut(s) 2503
BstSFI CTRYAG 4 cut(s) 29, 358, 871, 1302
BstUI CGCG 2 cut(s) 137, 193
BstV1I GCAGC 4 cut(s) 1381, 1395, 1513, 2429
BstV2I GAAGAC 6 cut(s) 626, 1009, 1514, 1790, 1892, 2307
BstX2I RGATCY 5 cut(s) 161, 319, 796, 934, 1183
BstYI RGATCY 5 cut(s) 161, 319, 796, 934, 1183
Bsu15I ATCGAT 1 cut(s) 811
BsuRI GGCC 5 cut(s) 35, 47, 1299, 1860, 1978
BsuTUI ATCGAT 1 cut(s) 811
BtgI CCRYGG 1 cut(s) 191
BtrI CACGTC 1 cut(s) 1549
BtsCI GGATG 4 cut(s) 446, 1039, 1289, 1489
BtsI GCAGTG 3 cut(s) 406, 762, 1939
BtsIMutI CAGTG 9 cut(s) 57, 261, 367, 406, 762, 1933, 1939, 2125, 2419
BveI ACCTGC 2 cut(s) 1062, 1130
Cac8I GCNNGC 3 cut(s) 216, 777, 831
CciI TCATGA 1 cut(s) 1693
Cfr42I CCGCGG 1 cut(s) 194
ClaI ATCGAT 1 cut(s) 811
CseI GACGC 2 cut(s) 143, 2016
Csp6I GTAC 6 cut(s) 267, 751, 1143, 1446, 1703, 1997
CviQI GTAC 6 cut(s) 267, 751, 1143, 1446, 1703, 1997
DdeI CTNAG 9 cut(s) 419, 768, 893, 945, 1104, 1452, 1539, 1802, 1952
DraI TTTAAA 1 cut(s) 1180
DrdI GACNNNNNNGTC 1 cut(s) 413
DseDI GACNNNNNNGTC 1 cut(s) 413
Eam1104I CTCTTC 1 cut(s) 1727
EarI CTCTTC 1 cut(s) 1727
EciI GGCGGA 1 cut(s) 2230
Eco147I AGGCCT 1 cut(s) 35
Eco47I GGWCC 6 cut(s) 885, 1241, 1286, 1363, 1687, 1912
Eco57I CTGAAG 6 cut(s) 291, 447, 483, 2082, 2213, 2395
EcoO109I RGGNCCY 5 cut(s) 885, 1298, 1363, 1687, 1976
EcoRII CCWGG 1 cut(s) 2503
EcoT22I ATGCAT 1 cut(s) 1576
Esp3I CGTCTC 1 cut(s) 2073
FalI AAGNNNNNCTT 4 cut(s) 1459, 1491, 2228, 2260
FaqI GGGAC 5 cut(s) 620, 898, 1700, 1850, 2045
FauI CCCGC 2 cut(s) 186, 1390
FauNDI CATATG 3 cut(s) 802, 824, 940
Fnu4HI GCNGC 5 cut(s) 191, 1395, 1409, 1502, 2418
FokI GGATG 4 cut(s) 433, 1046, 1276, 1476
Fsp4HI GCNGC 5 cut(s) 191, 1395, 1409, 1502, 2418
FspBI CTAG 7 cut(s) 69, 149, 413, 687, 794, 1116, 2000
GluI GCNGC 5 cut(s) 191, 1395, 1409, 1502, 2418
GsaI CCCAGC 2 cut(s) 1687, 1865
GsuI CTGGAG 2 cut(s) 190, 803
HaeIII GGCC 5 cut(s) 35, 47, 1299, 1860, 1978
HapII CCGG 1 cut(s) 1293
HgaI GACGC 2 cut(s) 143, 2016
Hin1I GRCGYC 1 cut(s) 2008
HincII GTYRAC 3 cut(s) 355, 1597, 2485
HindII GTYRAC 3 cut(s) 355, 1597, 2485
HinfI GANTC 6 cut(s) 62, 172, 443, 959, 1416, 1758
HpaI GTTAAC 1 cut(s) 1597
HpaII CCGG 1 cut(s) 1293
Hpy166II GTNNAC 5 cut(s) 355, 1597, 1912, 2090, 2485
Hpy188I TCNGA 6 cut(s) 466, 771, 894, 1849, 2232, 2431
Hpy8I GTNNAC 5 cut(s) 355, 1597, 1912, 2090, 2485
Hpy99I CGWCG 1 cut(s) 1553
HpyAV CCTTC 9 cut(s) 471, 899, 911, 1318, 1967, 2137, 2329, 2419, 2453
HpyCH4III ACNGT 7 cut(s) 352, 362, 1601, 2120, 2427, 2437, 2582
HpyCH4IV ACGT 3 cut(s) 1096, 1145, 1548
HpyF10VI GCNNNNNNNGC 2 cut(s) 1448, 2414
HpyF3I CTNAG 9 cut(s) 419, 768, 893, 945, 1104, 1452, 1539, 1802, 1952
HpySE526I ACGT 3 cut(s) 1096, 1145, 1548
Hsp92I GRCGYC 1 cut(s) 2008
KflI GGGWCCC 2 cut(s) 885, 1687
Kpn2I TCCGGA 1 cut(s) 1292
KpnI GGTACC 1 cut(s) 1706
KspAI GTTAAC 1 cut(s) 1597
KspI CCGCGG 1 cut(s) 194
LmnI GCTCC 3 cut(s) 247, 784, 2472
Lsp1109I GCAGC 4 cut(s) 1381, 1395, 1513, 2429
LweI GCATC 2 cut(s) 571, 1583
MaeI CTAG 7 cut(s) 69, 149, 413, 687, 794, 1116, 2000
MaeII ACGT 3 cut(s) 1096, 1145, 1548
MfeI CAATTG 4 cut(s) 389, 1635, 2363, 2517
MflI RGATCY 5 cut(s) 161, 319, 796, 934, 1183
MhlI GDGCHC 2 cut(s) 1110, 2590
MlyI GAGTC 1 cut(s) 181
MmeI TCCRAC 4 cut(s) 979, 1149, 1937, 2409
Mph1103I ATGCAT 1 cut(s) 1576
MroI TCCGGA 1 cut(s) 1292
MseI TTAA 7 cut(s) 879, 1179, 1596, 2013, 2070, 2195, 2387
MslI CAYNNNNRTG 3 cut(s) 1350, 1551, 2583
MspA1I CMGCKG 3 cut(s) 16, 193, 2420
MspI CCGG 1 cut(s) 1293
MspR9I CCNGG 1 cut(s) 2505
MunI CAATTG 4 cut(s) 389, 1635, 2363, 2517
Mva1269I GAATGC 3 cut(s) 1201, 1756, 1865
MvaI CCWGG 1 cut(s) 2505
MvnI CGCG 2 cut(s) 137, 193
MwoI GCNNNNNNNGC 2 cut(s) 1448, 2414
NdeI CATATG 3 cut(s) 802, 824, 940
NmuCI GTSAC 7 cut(s) 200, 818, 1534, 1805, 2120, 2276, 2393
NsiI ATGCAT 1 cut(s) 1576
NspI RCATGY 2 cut(s) 433, 833
OliI CACNNNNGTG 1 cut(s) 2583
PaeI GCATGC 1 cut(s) 833
PagI TCATGA 1 cut(s) 1693
PaqCI CACCTGC 1 cut(s) 1062
PceI AGGCCT 1 cut(s) 35
PctI GAATGC 3 cut(s) 1201, 1756, 1865
PfeI GAWTC 5 cut(s) 62, 443, 959, 1416, 1758
PflMI CCANNNNNTGG 1 cut(s) 2504
PfoI TCCNGGA 1 cut(s) 2503
PkrI GCNGC 5 cut(s) 192, 1396, 1410, 1503, 2419
PleI GAGTC 1 cut(s) 180
PpsI GAGTC 1 cut(s) 180
PpuMI RGGWCCY 3 cut(s) 885, 1363, 1687
PsiI TTATAA 1 cut(s) 488
Psp5II RGGWCCY 3 cut(s) 885, 1363, 1687
Psp6I CCWGG 1 cut(s) 2503
PspFI CCCAGC 2 cut(s) 1683, 1861
PspGI CCWGG 1 cut(s) 2503
PspPPI RGGWCCY 3 cut(s) 885, 1363, 1687
PsuI RGATCY 5 cut(s) 161, 319, 796, 934, 1183
PvuII CAGCTG 1 cut(s) 2420
RsaI GTAC 6 cut(s) 268, 752, 1144, 1447, 1704, 1998
RsaNI GTAC 6 cut(s) 267, 751, 1143, 1446, 1703, 1997
RseI CAYNNNNRTG 3 cut(s) 1350, 1551, 2583
SacII CCGCGG 1 cut(s) 194
SaqAI TTAA 7 cut(s) 879, 1179, 1596, 2013, 2070, 2195, 2387
SatI GCNGC 5 cut(s) 191, 1395, 1409, 1502, 2418
SchI GAGTC 1 cut(s) 181
ScrFI CCNGG 1 cut(s) 2505
SduI GDGCHC 2 cut(s) 1110, 2590
SfaNI GCATC 2 cut(s) 571, 1583
SfcI CTRYAG 4 cut(s) 29, 358, 871, 1302
Sfr303I CCGCGG 1 cut(s) 194
SgrBI CCGCGG 1 cut(s) 194
SinI GGWCC 6 cut(s) 885, 1241, 1286, 1363, 1687, 1912
SmiMI CAYNNNNRTG 3 cut(s) 1350, 1551, 2583
SphI GCATGC 1 cut(s) 833
SseBI AGGCCT 1 cut(s) 35
SsiI CCGC 6 cut(s) 14, 137, 191, 193, 1397, 2215
SspI AATATT 1 cut(s) 2260
SspMI CTAG 7 cut(s) 69, 149, 413, 687, 794, 1116, 2000
StuI AGGCCT 1 cut(s) 35
StyD4I CCNGG 1 cut(s) 2503
TaaI ACNGT 7 cut(s) 352, 362, 1601, 2120, 2427, 2437, 2582
TaiI ACGT 3 cut(s) 1099, 1148, 1551
TatI WGTACW 2 cut(s) 1445, 1996
TauI GCSGC 1 cut(s) 193
TfiI GAWTC 5 cut(s) 62, 443, 959, 1416, 1758
Tru1I TTAA 7 cut(s) 879, 1179, 1596, 2013, 2070, 2195, 2387
Tru9I TTAA 7 cut(s) 879, 1179, 1596, 2013, 2070, 2195, 2387
TscAI CASTG 9 cut(s) 64, 268, 367, 406, 769, 1933, 1939, 2125, 2419
TseFI GTSAC 7 cut(s) 200, 818, 1534, 1805, 2120, 2276, 2393
TseI GCWGC 4 cut(s) 1394, 1408, 1501, 2417
Tsp45I GTSAC 7 cut(s) 200, 818, 1534, 1805, 2120, 2276, 2393
TspGWI ACGGA 2 cut(s) 293, 2012
TspRI CASTG 9 cut(s) 64, 268, 367, 406, 769, 1933, 1939, 2125, 2419
Van91I CCANNNNNTGG 1 cut(s) 2504
VpaK11BI GGWCC 6 cut(s) 885, 1241, 1286, 1363, 1687, 1912
XapI RAATTY 5 cut(s) 586, 625, 1471, 1891, 2315
XbaI TCTAGA 1 cut(s) 793
XceI RCATGY 2 cut(s) 433, 833
XspI CTAG 7 cut(s) 69, 149, 413, 687, 794, 1116, 2000
Zsp2I ATGCAT 1 cut(s) 1576
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.