Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0008520.1

Orthogroup ID

OG0000051

Physical Location & Seq

Genomic Coordinates Reverse (-)

2729 .. 6730

Gene Structure 4002 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0008520.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2364 bp

atgattttatcttttctccaaggcacagctcaacatctcatgaaacatgaacaagtgcaagcgattatcggaccagtcacgtcaatggagacaaacttcgttattaacctcggggatcaaacccatgtgcccatattatcattttctgcaacaagtccttctcttacttcacttcggagttcctactttttccaatttgcacaaaatgacacatctcaagtagaagctattagtgctcttgttaaggcttttggatggagagaagttgtgcccatctacttagacacttcatacggcgagggaatcatcccgtttttaactaatgccttacaagaggtaggtgcccttatcccctataggagtgtcatttctccattcgcatccgatgatcaaattaaggaagagctttacaaattgatgacaatgcaaactagagtgttcattgtccacatgaccaccaatgatttaatatgctctaaactgtttaccaaggcaaacgagattggaatgatgaaggaaggatatgtttggttaacaactaacgggatagctaatagtttacagttgttaaattcttcagtcatccattccatgcatggagtgttaggtgtggaaactcatgtccaacataccccagagcttgaaggcttgaagttaaggtggaaaaaacagttccaaaaagacaatccaacgatcatctttggtgttgaattggatgtttttggtctgtgggcttatgatgctgcttttgcattggctatggcaattgagaaagtatatggactaactgcttcccacaacaacacagattataaaagttttcatgtctctcaatatggtccaaaacttcgcaaagccctgtcaactactagatttcaaggcatggctggagatttcagacttgttgatggacagcttcaatcatcagagtttcaaataattaatgtaaatggtggaggatcaagaacaataggattttggtcaccggaatatggattatggaaccacgtgtacccagcaaattctaagacaaatctaggacctgttatatggccaggagattctacctcggttccaaagggatgggagatcccaacaaatgggaagacgttgaaaataggagttcctaagaagtatgggtatcttgagtttgttaaggtcacgaaagatccaaggactaacataacagatgtcactgggttctgtattgatgtctttaaggcagttgtggaaatattaccatatgctcttccatatgagttcattccttttacaaagcaagatggcacgagcgctggcagttataatgatttgtgctatgaagtatatcgcgggaaccttgatgcagtggtcggagatatcacaatcctagcaaataggtcactctatgtggactatacaatgccatacacagaagcaggtctagtcatggtagtgcctgttgtagacatgaccagcaaaagttcctgggatttcttgaagccttggaaatgggacctttggctaacaacttcttgtttcttcctttttatcgtccaacaactccagccaacagttacagatttaaaggatctattaagcaagggggacaacgtcggctgcaagccaaatgcttacacttgcaacatcttgaaacaatttggttttaatgatgccaatcttaaggtatttagtactatggaagaacttgatgaagcactttcgaaagggactgcaaaaggtggtattgctgctgctattgatgaaaccccatatatgaagcttttccttgcaaagtattgcaacaaatataccatgattggacccatatttaaaactgatggttttgcctttgtctttccaaaacgttcccctcttctgcctgatgtttcacaggcaatcctgaatgtgactggaggagagaagataatgaacatcgaacatgaatggttcaagaaagaaagcaattgtcaagatttgagtgtcccaaaagtttctagcagcagtcttggtgctgatagcttttgggtcctttttctcattgccggagtagtttctttgttcgctctcatagtatttgtaattttgttcacttacaagtgcagggacatatggaattcagaagcctctataaggagttcgattggggccatgttaaaaattttcaatgaaaaagaccccagctatcacacattcaacagtgatcaaaggccagaagcagcagaaacttcagtctacaataattcgaaccacacagatgagcattctttattttctggagagcagcaagtactctcaattgaagggtctcaaaaagcaggtcccgcaaccgaggttcgtttcgcaactgaaattgaaatgacgactccttatacagctcactag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0007154 GO:0007165 GO:0008066 GO:0008150 GO:0008324 GO:0009719 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0043200 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046873 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

787

Amino Acids

87.82

Weight (kDa)

5.66

Isoelectric Point (pI)

32.75

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000051)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca	FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica	MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica	Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis	pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis	RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata	RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora	Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii	Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa	Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha	Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana	Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	813, 1305
Acc36I	ACCTGC	2 cut(s)	1409, 2288
AccB1I	GGYRCC	1 cut(s)	341
AccB7I	CCANNNNNTGG	1 cut(s)	1100
AccI	GTMKAC	2 cut(s)	1446, 2214
AccII	CGCG	1 cut(s)	1332
AciI	CCGC	2 cut(s)	1332, 2304
AclI	AACGTT	1 cut(s)	1846
AclWI	GGATC	5 cut(s)	123, 967, 1084, 1163, 1578
AcoI	YGGCCR	1 cut(s)	1052
AcsI	RAATTY	4 cut(s)	571, 1021, 2095, 2139
AcuI	CTGAAG	2 cut(s)	561, 2193
AcvI	CACGTG	1 cut(s)	1009
AfaI	GTAC	3 cut(s)	1013, 1675, 2271
AfeI	AGCGCT	1 cut(s)	1294
AfiI	CCNNNNNNNGG	3 cut(s)	992, 1100, 2112
AflII	CTTAAG	1 cut(s)	1661
AflIII	ACRYGT	1 cut(s)	1008
AjiI	CACGTC	1 cut(s)	81
AjnI	CCWGG	2 cut(s)	1054, 1466
Alw21I	GWGCWC	1 cut(s)	238
Alw26I	GTCTC	3 cut(s)	83, 832, 2292
AlwI	GGATC	5 cut(s)	123, 967, 1084, 1163, 1578
Ama87I	CYCGRG	1 cut(s)	110
Aor51HI	AGCGCT	1 cut(s)	1294
AoxI	GGCC	3 cut(s)	1052, 2127, 2189
ApeKI	GCWGC	7 cut(s)	743, 1599, 1730, 1733, 1980, 2198, 2263
ApoI	RAATTY	4 cut(s)	571, 1021, 2095, 2139
ArsI	GACNNNNNNTTYG	2 cut(s)	2284, 2316
AseI	ATTAAT	1 cut(s)	942
Asp700I	GAANNNNTTC	1 cut(s)	1763
AspLEI	GCGC	1 cut(s)	1295
AspS9I	GGNCC	8 cut(s)	71, 839, 1040, 1495, 1802, 2008, 2127, 2300
AsuHPI	GGTGA	1 cut(s)	975
AsuII	TTCGAA	2 cut(s)	1703, 2225
AvaI	CYCGRG	1 cut(s)	110
AvaII	GGWCC	7 cut(s)	71, 839, 1040, 1495, 1802, 2008, 2300
BaeGI	GKGCMC	3 cut(s)	132, 273, 346
BalI	TGGCCA	1 cut(s)	1054
BanI	GGYRCC	1 cut(s)	341
BauI	CACGAG	1 cut(s)	1288
BbrPI	CACGTG	1 cut(s)	1009
BbsI	GAAGAC	1 cut(s)	1112
Bbv12I	GWGCWC	1 cut(s)	238
BbvI	GCAGC	7 cut(s)	730, 1586, 1717, 1720, 1992, 2210, 2275
BccI	CCATC	6 cut(s)	249, 281, 902, 1077, 1277, 1814
BceAI	ACGGC	1 cut(s)	310
BciT130I	CCWGG	2 cut(s)	1056, 1468
BclI	TGATCA	2 cut(s)	388, 2182
BcoDI	GTCTC	3 cut(s)	83, 832, 2292
BfaI	CTAG	7 cut(s)	432, 870, 1037, 1370, 1424, 1977, 2362
BfmI	CTRYAG	1 cut(s)	355
BfoI	RGCGCY	1 cut(s)	1296
BfrI	CTTAAG	1 cut(s)	1661
BfuAI	ACCTGC	2 cut(s)	1409, 2288
BisI	GCNGC	7 cut(s)	744, 1600, 1731, 1734, 1981, 2199, 2264
BlsI	GCNGC	7 cut(s)	745, 1601, 1732, 1735, 1982, 2200, 2265
BmcAI	AGTACT	2 cut(s)	1675, 2271
Bme1390I	CCNGG	2 cut(s)	1056, 1468
Bme18I	GGWCC	7 cut(s)	71, 839, 1040, 1495, 1802, 2008, 2300
BmeT110I	CYCGRG	1 cut(s)	110
BmgBI	CACGTC	1 cut(s)	81
BmgT120I	GGNCC	8 cut(s)	71, 839, 1040, 1495, 1802, 2008, 2127, 2300
BmiI	GGNNCC	9 cut(s)	343, 1004, 1074, 1337, 1496, 1804, 2009, 2128, 2302
BmrFI	CCNGG	2 cut(s)	1056, 1468
BmrI	ACTGGG	1 cut(s)	1206
BmsI	GCATC	4 cut(s)	389, 730, 1333, 1642
BmuI	ACTGGG	1 cut(s)	1206
BpiI	GAAGAC	1 cut(s)	1112
BpmI	CTGGAG	4 cut(s)	909, 1529, 1914, 2277
Bpu14I	TTCGAA	2 cut(s)	1703, 2225
BpuEI	CTTGAG	2 cut(s)	201, 1166
BsaAI	YACGTR	1 cut(s)	1009
BsaBI	GATNNNNATC	1 cut(s)	1656
BsaI	GGTCTC	1 cut(s)	2292
BsaJI	CCNNGG	8 cut(s)	19, 109, 489, 1068, 1172, 1467, 1484, 2310
BsaWI	WCCGGW	1 cut(s)	985
Bsc4I	CCNNNNNNNGG	3 cut(s)	992, 1100, 2112
Bse1I	ACTGG	3 cut(s)	74, 1201, 1897
Bse3DI	GCAATG	1 cut(s)	2019
Bse8I	GATNNNNATC	1 cut(s)	1656
BseBI	CCWGG	2 cut(s)	1056, 1468
BseDI	CCNNGG	8 cut(s)	19, 109, 489, 1068, 1172, 1467, 1484, 2310
BseGI	GGATG	6 cut(s)	260, 306, 380, 582, 721, 1088
BseJI	GATNNNNATC	1 cut(s)	1656
BseLI	CCNNNNNNNGG	3 cut(s)	992, 1100, 2112
BseMI	GCAATG	1 cut(s)	2019
BseNI	ACTGG	3 cut(s)	74, 1201, 1897
BseRI	GAGGAG	1 cut(s)	1911
BseSI	GKGCMC	3 cut(s)	132, 273, 346
BseXI	GCAGC	7 cut(s)	730, 1586, 1717, 1720, 1992, 2210, 2275
BseYI	CCCAGC	2 cut(s)	1015, 2159
BsgI	GTGCAG	1 cut(s)	2101
Bsh1236I	CGCG	1 cut(s)	1332
BshFI	GGCC	3 cut(s)	1054, 2129, 2191
BshNI	GGYRCC	1 cut(s)	341
BsiHKAI	GWGCWC	1 cut(s)	238
BsiHKCI	CYCGRG	1 cut(s)	110
BsiSI	CCGG	2 cut(s)	986, 2025
BslFI	GGGAC	6 cut(s)	1508, 1601, 1723, 1949, 2099, 2286
BslI	CCNNNNNNNGG	3 cut(s)	992, 1100, 2112
BsmAI	GTCTC	3 cut(s)	83, 832, 2292
BsmFI	GGGAC	6 cut(s)	1508, 1601, 1723, 1949, 2099, 2286
BsmI	GAATGC	1 cut(s)	2242
BsnI	GGCC	3 cut(s)	1054, 2129, 2191
Bso31I	GGTCTC	1 cut(s)	2292
BsoBI	CYCGRG	1 cut(s)	110
Bsp119I	TTCGAA	2 cut(s)	1703, 2225
Bsp1286I	GDGCHC	4 cut(s)	132, 238, 273, 346
Bsp143I	GATC	8 cut(s)	115, 388, 693, 959, 1089, 1168, 1570, 2182
BspACI	CCGC	2 cut(s)	1332, 2304
BspANI	GGCC	3 cut(s)	1054, 2129, 2191
BspFNI	CGCG	1 cut(s)	1332
BspHI	TCATGA	1 cut(s)	39
BspLI	GGNNCC	9 cut(s)	343, 1004, 1074, 1337, 1496, 1804, 2009, 2128, 2302
BspMI	ACCTGC	2 cut(s)	1409, 2288
BspPI	GGATC	5 cut(s)	123, 967, 1084, 1163, 1578
BspQI	GCTCTTC	2 cut(s)	396, 1254
BspT104I	TTCGAA	2 cut(s)	1703, 2225
BspT107I	GGYRCC	1 cut(s)	341
BspTI	CTTAAG	1 cut(s)	1661
BspTNI	GGTCTC	1 cut(s)	2292
BsrDI	GCAATG	1 cut(s)	2019
BsrI	ACTGG	3 cut(s)	74, 1201, 1897
BssECI	CCNNGG	8 cut(s)	19, 109, 489, 1068, 1172, 1467, 1484, 2310
BssMI	GATC	8 cut(s)	115, 388, 693, 959, 1089, 1168, 1570, 2182
BssSI	CACGAG	1 cut(s)	1288
BssT1I	CCWWGG	4 cut(s)	19, 489, 1172, 1484
Bst2BI	CACGAG	1 cut(s)	1288
Bst2UI	CCWGG	2 cut(s)	1056, 1468
Bst4CI	ACNGT	5 cut(s)	483, 564, 672, 1555, 2180
Bst6I	CTCTTC	3 cut(s)	396, 1254, 1860
BstAFI	CTTAAG	1 cut(s)	1661
BstBAI	YACGTR	1 cut(s)	1009
BstBI	TTCGAA	2 cut(s)	1703, 2225
BstC8I	GCNNGC	3 cut(s)	60, 1297, 1604
BstDEI	CTNAG	3 cut(s)	280, 1026, 1128
BstEII	GGTNACC	1 cut(s)	981
BstENI	CCTNNNNNAGG	1 cut(s)	2110
BstF5I	GGATG	6 cut(s)	260, 306, 380, 582, 721, 1088
BstFNI	CGCG	1 cut(s)	1332
BstH2I	RGCGCY	1 cut(s)	1296
BstHHI	GCGC	1 cut(s)	1295
BstKTI	GATC	8 cut(s)	118, 391, 696, 962, 1092, 1171, 1573, 2185
BstMAI	GTCTC	3 cut(s)	83, 832, 2292
BstMBI	GATC	8 cut(s)	115, 388, 693, 959, 1089, 1168, 1570, 2182
BstMWI	GCNNNNNNNGC	4 cut(s)	233, 740, 749, 2303
BstNI	CCWGG	2 cut(s)	1056, 1468
BstPI	GGTNACC	1 cut(s)	981
BstSCI	CCNGG	2 cut(s)	1054, 1466
BstSFI	CTRYAG	1 cut(s)	355
BstSLI	GKGCMC	3 cut(s)	132, 273, 346
BstUI	CGCG	1 cut(s)	1332
BstV1I	GCAGC	7 cut(s)	730, 1586, 1717, 1720, 1992, 2210, 2275
BstV2I	GAAGAC	1 cut(s)	1112
BstX2I	RGATCY	3 cut(s)	1089, 1168, 1570
BstXI	CCANNNNNNTGG	1 cut(s)	1083
BstYI	RGATCY	3 cut(s)	1089, 1168, 1570
BsuRI	GGCC	3 cut(s)	1054, 2129, 2191
BtrI	CACGTC	1 cut(s)	81
BtsCI	GGATG	6 cut(s)	260, 306, 380, 582, 721, 1088
BtsI	GCAGTG	1 cut(s)	1353
BtsIMutI	CAGTG	3 cut(s)	1194, 1353, 2185
BveI	ACCTGC	2 cut(s)	1409, 2288
Cac8I	GCNNGC	3 cut(s)	60, 1297, 1604
CciI	TCATGA	1 cut(s)	39
CfoI	GCGC	1 cut(s)	1295
Cfr13I	GGNCC	8 cut(s)	71, 839, 1040, 1495, 1802, 2008, 2127, 2300
Csp6I	GTAC	3 cut(s)	1012, 1674, 2270
CviQI	GTAC	3 cut(s)	1012, 1674, 2270
DdeI	CTNAG	3 cut(s)	280, 1026, 1128
DpnI	GATC	8 cut(s)	117, 390, 695, 961, 1091, 1170, 1572, 2184
DpnII	GATC	8 cut(s)	115, 388, 693, 959, 1089, 1168, 1570, 2182
DraI	TTTAAA	2 cut(s)	1566, 1813
EaeI	YGGCCR	1 cut(s)	1052
Eam1104I	CTCTTC	3 cut(s)	396, 1254, 1860
EarI	CTCTTC	3 cut(s)	396, 1254, 1860
Eco130I	CCWWGG	4 cut(s)	19, 489, 1172, 1484
Eco31I	GGTCTC	1 cut(s)	2292
Eco32I	GATATC	1 cut(s)	1360
Eco47I	GGWCC	7 cut(s)	71, 839, 1040, 1495, 1802, 2008, 2300
Eco47III	AGCGCT	1 cut(s)	1294
Eco57I	CTGAAG	2 cut(s)	561, 2193
Eco72I	CACGTG	1 cut(s)	1009
Eco88I	CYCGRG	1 cut(s)	110
Eco91I	GGTNACC	1 cut(s)	981
EcoNI	CCTNNNNNAGG	1 cut(s)	2110
EcoO109I	RGGNCCY	4 cut(s)	1040, 1495, 2008, 2300
EcoO65I	GGTNACC	1 cut(s)	981
EcoRI	GAATTC	1 cut(s)	2095
EcoRII	CCWGG	2 cut(s)	1054, 1466
EcoRV	GATATC	1 cut(s)	1360
EcoT14I	CCWWGG	4 cut(s)	19, 489, 1172, 1484
EcoT22I	ATGCAT	1 cut(s)	597
ErhI	CCWWGG	4 cut(s)	19, 489, 1172, 1484
FaqI	GGGAC	6 cut(s)	1508, 1601, 1723, 1949, 2099, 2286
FauI	CCCGC	2 cut(s)	1325, 2311
FauNDI	CATATG	3 cut(s)	1243, 1255, 2090
FbaI	TGATCA	2 cut(s)	388, 2182
FblI	GTMKAC	2 cut(s)	1446, 2214
Fnu4HI	GCNGC	7 cut(s)	744, 1600, 1731, 1734, 1981, 2199, 2264
FokI	GGATG	6 cut(s)	267, 293, 367, 569, 728, 1095
Fsp4HI	GCNGC	7 cut(s)	744, 1600, 1731, 1734, 1981, 2199, 2264
FspBI	CTAG	7 cut(s)	432, 870, 1037, 1370, 1424, 1977, 2362
GlaI	GCGC	1 cut(s)	1294
GluI	GCNGC	7 cut(s)	744, 1600, 1731, 1734, 1981, 2199, 2264
GsaI	CCCAGC	2 cut(s)	1019, 2163
GsuI	CTGGAG	4 cut(s)	909, 1529, 1914, 2277
HaeII	RGCGCY	1 cut(s)	1296
HaeIII	GGCC	3 cut(s)	1054, 2129, 2191
HapII	CCGG	2 cut(s)	986, 2025
HhaI	GCGC	1 cut(s)	1295
Hin6I	GCGC	1 cut(s)	1293
HinP1I	GCGC	1 cut(s)	1293
HincII	GTYRAC	2 cut(s)	534, 864
HindII	GTYRAC	2 cut(s)	534, 864
HindIII	AAGCTT	1 cut(s)	1760
HinfI	GANTC	3 cut(s)	303, 1061, 2344
HpaI	GTTAAC	1 cut(s)	534
HpaII	CCGG	2 cut(s)	986, 2025
HphI	GGTGA	1 cut(s)	975
Hpy188I	TCNGA	7 cut(s)	71, 177, 385, 899, 928, 1355, 2101
Hpy99I	CGWCG	1 cut(s)	1598
HpyAV	CCTTC	5 cut(s)	168, 508, 512, 638, 2276
HpyCH4III	ACNGT	5 cut(s)	483, 564, 672, 1555, 2180
HpyCH4IV	ACGT	5 cut(s)	80, 1008, 1109, 1593, 1846
HpyF10VI	GCNNNNNNNGC	4 cut(s)	233, 740, 749, 2303
HpyF3I	CTNAG	3 cut(s)	280, 1026, 1128
HpySE526I	ACGT	5 cut(s)	80, 1008, 1109, 1593, 1846
HspAI	GCGC	1 cut(s)	1293
Ksp22I	TGATCA	2 cut(s)	388, 2182
KspAI	GTTAAC	1 cut(s)	534
Kzo9I	GATC	8 cut(s)	115, 388, 693, 959, 1089, 1168, 1570, 2182
LguI	GCTCTTC	2 cut(s)	396, 1254
Lsp1109I	GCAGC	7 cut(s)	730, 1586, 1717, 1720, 1992, 2210, 2275
LweI	GCATC	4 cut(s)	389, 730, 1333, 1642
MaeI	CTAG	7 cut(s)	432, 870, 1037, 1370, 1424, 1977, 2362
MaeII	ACGT	5 cut(s)	80, 1008, 1109, 1593, 1846
MaeIII	GTNAC	7 cut(s)	76, 981, 1159, 1192, 1380, 1555, 1888
MalI	GATC	8 cut(s)	117, 390, 695, 961, 1091, 1170, 1572, 2184
MboI	GATC	8 cut(s)	115, 388, 693, 959, 1089, 1168, 1570, 2182
MboII	GAAGA	8 cut(s)	413, 567, 1117, 1241, 1513, 1694, 1847, 1915
MfeI	CAATTG	3 cut(s)	765, 1945, 2277
MflI	RGATCY	3 cut(s)	1089, 1168, 1570
MhlI	GDGCHC	4 cut(s)	132, 238, 273, 346
MlsI	TGGCCA	1 cut(s)	1054
MluNI	TGGCCA	1 cut(s)	1054
MlyI	GAGTC	1 cut(s)	2338
MmeI	TCCRAC	4 cut(s)	649, 713, 1333, 1561
MnlI	CCTC	9 cut(s)	119, 292, 328, 950, 1078, 1863, 1889, 2116, 2305
Mox20I	TGGCCA	1 cut(s)	1054
Mph1103I	ATGCAT	1 cut(s)	597
MroXI	GAANNNNTTC	1 cut(s)	1763
MscI	TGGCCA	1 cut(s)	1054
MslI	CAYNNNNRTG	3 cut(s)	83, 1433, 2235
Msp20I	TGGCCA	1 cut(s)	1054
MspCI	CTTAAG	1 cut(s)	1661
MspI	CCGG	2 cut(s)	986, 2025
MspR9I	CCNGG	2 cut(s)	1056, 1468
MunI	CAATTG	3 cut(s)	765, 1945, 2277
Mva1269I	GAATGC	1 cut(s)	2242
MvaI	CCWGG	2 cut(s)	1056, 1468
MvnI	CGCG	1 cut(s)	1332
MwoI	GCNNNNNNNGC	4 cut(s)	233, 740, 749, 2303
NdeI	CATATG	3 cut(s)	1243, 1255, 2090
NdeII	GATC	8 cut(s)	115, 388, 693, 959, 1089, 1168, 1570, 2182
NlaIV	GGNNCC	9 cut(s)	343, 1004, 1074, 1337, 1496, 1804, 2009, 2128, 2302
NmuCI	GTSAC	6 cut(s)	76, 981, 1159, 1192, 1380, 1888
NsiI	ATGCAT	1 cut(s)	597
NspV	TTCGAA	2 cut(s)	1703, 2225
PagI	TCATGA	1 cut(s)	39
PciSI	GCTCTTC	2 cut(s)	396, 1254
PctI	GAATGC	1 cut(s)	2242
PdmI	GAANNNNTTC	1 cut(s)	1763
PfeI	GAWTC	2 cut(s)	303, 1061
PflFI	GACNNNGTC	1 cut(s)	1592
PflMI	CCANNNNNTGG	1 cut(s)	1100
PkrI	GCNGC	7 cut(s)	745, 1601, 1732, 1735, 1982, 2200, 2265
PleI	GAGTC	1 cut(s)	2338
PmaCI	CACGTG	1 cut(s)	1009
PmlI	CACGTG	1 cut(s)	1009
PpsI	GAGTC	1 cut(s)	2338
Ppu21I	YACGTR	1 cut(s)	1009
PpuMI	RGGWCCY	4 cut(s)	1040, 1495, 2008, 2300
PshBI	ATTAAT	1 cut(s)	942
PsiI	TTATAA	2 cut(s)	813, 1305
Psp1406I	AACGTT	1 cut(s)	1846
Psp5II	RGGWCCY	4 cut(s)	1040, 1495, 2008, 2300
Psp6I	CCWGG	2 cut(s)	1054, 1466
PspCI	CACGTG	1 cut(s)	1009
PspEI	GGTNACC	1 cut(s)	981
PspFI	CCCAGC	2 cut(s)	1015, 2159
PspGI	CCWGG	2 cut(s)	1054, 1466
PspN4I	GGNNCC	9 cut(s)	343, 1004, 1074, 1337, 1496, 1804, 2009, 2128, 2302
PspPI	GGNCC	8 cut(s)	71, 839, 1040, 1495, 1802, 2008, 2127, 2300
PspPPI	RGGWCCY	4 cut(s)	1040, 1495, 2008, 2300
PsrI	GAACNNNNNNTAC	2 cut(s)	995, 1027
PsuI	RGATCY	3 cut(s)	1089, 1168, 1570
PsyI	GACNNNGTC	1 cut(s)	1592
RsaI	GTAC	3 cut(s)	1013, 1675, 2271
RsaNI	GTAC	3 cut(s)	1012, 1674, 2270
RseI	CAYNNNNRTG	3 cut(s)	83, 1433, 2235
SapI	GCTCTTC	2 cut(s)	396, 1254
SatI	GCNGC	7 cut(s)	744, 1600, 1731, 1734, 1981, 2199, 2264
Sau3AI	GATC	8 cut(s)	115, 388, 693, 959, 1089, 1168, 1570, 2182
Sau96I	GGNCC	8 cut(s)	71, 839, 1040, 1495, 1802, 2008, 2127, 2300
ScaI	AGTACT	2 cut(s)	1675, 2271
SchI	GAGTC	1 cut(s)	2338
ScrFI	CCNGG	2 cut(s)	1056, 1468
SduI	GDGCHC	4 cut(s)	132, 238, 273, 346
SfaNI	GCATC	4 cut(s)	389, 730, 1333, 1642
SfcI	CTRYAG	1 cut(s)	355
SfuI	TTCGAA	2 cut(s)	1703, 2225
SinI	GGWCC	7 cut(s)	71, 839, 1040, 1495, 1802, 2008, 2300
SmiMI	CAYNNNNRTG	3 cut(s)	83, 1433, 2235
SmlI	CTYRAG	3 cut(s)	216, 1145, 1661
SmoI	CTYRAG	3 cut(s)	216, 1145, 1661
SsiI	CCGC	2 cut(s)	1332, 2304
SspI	AATATT	1 cut(s)	1236
SspMI	CTAG	7 cut(s)	432, 870, 1037, 1370, 1424, 1977, 2362
StyD4I	CCNGG	2 cut(s)	1054, 1466
StyI	CCWWGG	4 cut(s)	19, 489, 1172, 1484
TaaI	ACNGT	5 cut(s)	483, 564, 672, 1555, 2180
TaiI	ACGT	5 cut(s)	83, 1011, 1112, 1596, 1849
TaqI	TCGA	4 cut(s)	1703, 1917, 2120, 2225
TatI	WGTACW	2 cut(s)	1673, 2269
TfiI	GAWTC	2 cut(s)	303, 1061
TscAI	CASTG	3 cut(s)	1201, 1353, 2185
TseFI	GTSAC	6 cut(s)	76, 981, 1159, 1192, 1380, 1888
TseI	GCWGC	7 cut(s)	743, 1599, 1730, 1733, 1980, 2198, 2263
Tsp45I	GTSAC	6 cut(s)	76, 981, 1159, 1192, 1380, 1888
TspRI	CASTG	3 cut(s)	1201, 1353, 2185
Tth111I	GACNNNGTC	1 cut(s)	1592
Van91I	CCANNNNNTGG	1 cut(s)	1100
Vha464I	CTTAAG	1 cut(s)	1661
VpaK11BI	GGWCC	7 cut(s)	71, 839, 1040, 1495, 1802, 2008, 2300
VspI	ATTAAT	1 cut(s)	942
XagI	CCTNNNNNAGG	1 cut(s)	2110
XapI	RAATTY	4 cut(s)	571, 1021, 2095, 2139
XcmI	CCANNNNNNNNNTGG	1 cut(s)	593
XmiI	GTMKAC	2 cut(s)	1446, 2214
XmnI	GAANNNNTTC	1 cut(s)	1763
XspI	CTAG	7 cut(s)	432, 870, 1037, 1370, 1424, 1977, 2362
ZrmI	AGTACT	2 cut(s)	1675, 2271
Zsp2I	ATGCAT	1 cut(s)	597

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.