Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0000051

Physical Location & Seq

Genomic Coordinates Forward (+)

9857156 .. 9861210

Gene Structure 4055 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g11340.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2685 bp

ATGATAAACAAGAACCTCGCCAATCTTACTCTCGTTGTTTTCATTTGTTTCTTCTTTGTTTCATCAAGAATTGGCTTGGCCATGGCAGGAAACAAAACCATCCCCGTCAATGTGGGGGTTGTTCTTGATGATCTTGATTCGATGGAAGGGAAGGCTTGGTTGAGCTGTATTGAAATGGCCCTTTCAGATTTCTACGCTTCTCATTCTCACTACAAGACCAGGCTGGTTTTGAATGTAAGGGACTCCAATGAAAACGTTGTGGGGGCAGCTGCTGCAGCTTTAGATCTGATCAAGAATGCAGAAGTGCAAGCAATATTAGGGCCAGTGACATCAATGGAGGCAAACTTTGTTATCAACCTGGGAGACCAAGCCCATGTACCTATTATATCATTTTCAGCAACAAGCCCTTCTCTCACTTCCCTCCGGAGCTCCTACTTTTTCCGATTCACACAAAATGACTCAACCCAAGTGAAAGCCATAAGTGCTATTGTAGAAGGTTTTGGATGGCGACAAGTTGTGCTTGTCTATATAGACAATGATTTTGGGGAGGGTGTCATGTCATACTTAACTGATGCTTTACAAGAGGTTGATGCTCTTGTTCCCTACCGGAGTGCCATTTCCCCATCAGCCACAGATAGTCAAATTCTTGAAGAACTTTACAAGTTGATGGCCATGCAGACTAGAGTCTTCATAGTCCACATGACTTCTGATCTATCATCTAGGCTGTTTACCAAAGCTAAAGAGATTGGAATGATGAACGAAGGATATGCTTGGCTGACCACTAATGAGATACCGAACAGTTTAAAGTCGATGAAATCCTCAGTAATCCATTCGATGCGTGGTTTACTGGGTGTACAAACGTATGTTCCAATAACAAGTGAGCTCGACGAATTCAACAAAAGGTGGAAACAACAATTTCAAAAAGAGAATCCAGCCATAATTGATGCTGATTATGAAGTTTTTGGATTATGGGCTTATGATGCTACAGTTGCACTAGCCATGGCAGTTGAAACAGTTGGGATTTCTAACTCTGGGTTCAAAAACTCAAATGCTTCCTTCAAGTCAACAGATCTTGATACTCTTAAGGTCTCTCAATATGGTCCAAAACTTGCTAAAGCATTATCAAGTACAAGATTCAATGGCATAGCAGGAGATGTTAGGCTCATTGATGGGCAGCTACAATCATCCACTTTTAAGATAGTCAATATAATTGGCGATGTAGCAAGAGGAATTGGATTTTGGACGTTACAAAATGGAATCAAGAAAAGGTTGGGTCAACGTCAATCCTCTGCAAACTGTTCAACATTCAACTGCAATCTTGGCTCAATTATATGGCCGGGAGATTCCTTCTCTGTTCCCAAGGGATGGGAGATTCCGACAAATGGCAAGAAGTTGAGAATAGGAGTTCCGATGAAGGGTGGCTTTACTGAGTTTGTTAAGGTAACCAAAGATCCAAGTACCAACAGAACAAATATCGTTGGCTTTAGTATTGACGTGTTCAAGGCTGCGGTGGAAATGCTACCGTTTGCTCTTCCTTATGAGTTGATACCCTTCGCAAAGCCTGATGGCACCAGTGCTGGCACTTACAATGATTTAGTCTATCAAGTATTTCTTGAGAAATTTGATGCTGTGGTGGGGGATACGACAATCCGAGCAAATAGATCCTTGTATGTGGACTTTTCAATGCCTTATACAGAATCTGGTATTGTGATGGTTGTGCCAACAGTAGACAATAGAAGGGAGAAAGTGGTCAGTAACTTGGCCAGATTCGTGATGATAATATGGGTATTTGTGATGCTAATCCTGACACAAAGTTACACTGCTAGTTTAGCATCACTATTAACTGTCCAACAACTCCACCCTATTGTCACCGATATAAAGGATCTGTTAAGGAATGGGGATACTGTCGGATATGCAGAGAATGCATACACTTACGATGTCTTGAGAGAAGTAGGTTTTGATGATTCAAAGCTGAAGGAGTTCAAATCTACAGAAGATTTGGATGCTCTTCTTTCAAAAGGAAGTGCAAATGGTGGGATTGCTGCTGCAATTGATGAAACACCCAACATGAAGCTTTTTCTTGGAAAATATTGTTCCAAATATACAATGATTGGACCCATCTTCAAAACGGATGGGTTTGCCTTTGTCTTTCCAAAACGCTCCCCTCTTATACCAGATATTTCGCATGCCGTTCTAAGCGTGACCGAAGGAGAGAAGATACTTGACTTTGAAAGTAAATGGTTCATGAAAGATAGTAACTGTGAAGACTTGAGTGCCCCAAAAGTATCTAGCTATAGTCTTGGCCTTGAGAGCTTTTGGGGCCTATTCCTCGTTTCCGGGGTGGCTTCGATAATTGCTCTTATGATTTTTGTTGCTTCATTCACGTACAGGCATAGACACATCTTGGTGCACCCTGATACAAGAGTATCGACATGGGGAAGGATTCAGGTCATGTTCAAAATTTTCAATGAGAAAGACCTCGAGTCTCATACTTTCAAAAGTAGTTCATCACATGATTCAGTTAAGGCGTCACCAAACAACTTCCCAGACAGTCCATTCAGCTATACTACAAAGCAGACTGATAGGAACCTTGTGTTCTATGGAGAGCGACAAACACCATCAACGGGTCAAGCGTCTCCTGACGTAAATTTTGAGGAGCTTTCTTTTGCAATGCCAGAAGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0007154 GO:0007165 GO:0008066 GO:0008150 GO:0008324 GO:0009719 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0043200 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046873 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

895

Amino Acids

98.91

Weight (kDa)

5.79

Isoelectric Point (pI)

32.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peripla_BP_6	PF13458	47 - 393	4.9e-23	Periplasmic binding protein
ANF_receptor	PF01094	53 - 405	9e-85	Receptor family ligand binding region
Lig_chan-Glu_bd	PF10613	483 - 573	5.7e-08	Ligated ion channel L-glutamate- and glycine-binding site
SBP_bac_3	PF00497	489 - 812	4.7e-06	Bacterial extracellular solute-binding proteins, family 3
Lig_chan	PF00060	591 - 846	1.2e-37	Ligand-gated ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Publication-ready

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Orthologous Genes (Group: OG0000051)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca	FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica	MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica	Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis	pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis	RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata	RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora	Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii	Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa	Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha	Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana	Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1568
AccB7I	CCANNNNNTGG	1 cut(s)	1365
AccI	GTMKAC	1 cut(s)	1728
AccIII	TCCGGA	1 cut(s)	423
AciI	CCGC	1 cut(s)	1508
AclI	AACGTT	1 cut(s)	255
AclWI	GGATC	3 cut(s)	1445, 1656, 1890
AcoI	YGGCCR	4 cut(s)	78, 669, 1334, 1761
AcsI	RAATTY	5 cut(s)	642, 890, 1619, 2460, 2647
AcuI	CTGAAG	1 cut(s)	1994
AcyI	GRCGYC	1 cut(s)	2528
AfaI	GTAC	5 cut(s)	378, 855, 1129, 1459, 2387
AfiI	CCNNNNNNNGG	4 cut(s)	1365, 1382, 1415, 2624
AflII	CTTAAG	1 cut(s)	1082
AflIII	ACRYGT	1 cut(s)	1494
AhdI	GACNNNNNGTC	1 cut(s)	2482
AjiI	CACGTC	1 cut(s)	1495
AjnI	CCWGG	2 cut(s)	218, 357
AjuI	GAANNNNNNNTTGG	2 cut(s)	1222, 1254
Alw21I	GWGCWC	3 cut(s)	431, 885, 2412
Alw26I	GTCTC	4 cut(s)	357, 1093, 2490, 2640
Alw44I	GTGCAC	1 cut(s)	2408
AlwI	GGATC	3 cut(s)	1445, 1656, 1890
AlwNI	CAGNNNCTG	2 cut(s)	272, 1700
Ama87I	CYCGRG	1 cut(s)	2480
Aor13HI	TCCGGA	1 cut(s)	423
AoxI	GGCC	8 cut(s)	78, 177, 320, 669, 1334, 1761, 2302, 2320
ApaLI	GTGCAC	1 cut(s)	2408
ApeKI	GCWGC	8 cut(s)	266, 269, 272, 275, 1174, 1505, 2042, 2045
ApoI	RAATTY	5 cut(s)	642, 890, 1619, 2460, 2647
ArsI	GACNNNNNNTTYG	4 cut(s)	524, 556, 2633, 2665
Asp700I	GAANNNNTTC	1 cut(s)	1979
AspS9I	GGNCC	5 cut(s)	178, 320, 1100, 2114, 2320
AsuC2I	CCSGG	2 cut(s)	1338, 2338
AsuHPI	GGTGA	2 cut(s)	1861, 2523
AvaI	CYCGRG	1 cut(s)	2480
AvaII	GGWCC	2 cut(s)	1100, 2114
BaeGI	GKGCMC	2 cut(s)	2278, 2412
BaeI	ACNNNNGTAYC	4 cut(s)	2409, 2409, 2442, 2442
BalI	TGGCCA	3 cut(s)	80, 671, 1763
BanI	GGYRCC	1 cut(s)	1568
BanII	GRGCYC	2 cut(s)	431, 885
BbsI	GAAGAC	2 cut(s)	679, 2271
Bbv12I	GWGCWC	3 cut(s)	431, 885, 2412
BbvI	GCAGC	8 cut(s)	256, 259, 278, 287, 1186, 1492, 2029, 2032
BceAI	ACGGC	1 cut(s)	2174
BcgI	CGANNNNNNTGC	2 cut(s)	749, 783
BciT130I	CCWGG	2 cut(s)	220, 359
BciVI	GTATCC	2 cut(s)	1633, 1894
BclI	TGATCA	1 cut(s)	288
BcnI	CCSGG	2 cut(s)	1338, 2338
BcoDI	GTCTC	4 cut(s)	357, 1093, 2490, 2640
BfaI	CTAG	5 cut(s)	681, 720, 995, 1824, 2289
BfmI	CTRYAG	4 cut(s)	273, 984, 1989, 2293
BfrI	CTTAAG	1 cut(s)	1082
BfuI	GTATCC	2 cut(s)	1633, 1894
BglII	AGATCT	2 cut(s)	283, 1069
BisI	GCNGC	8 cut(s)	267, 270, 273, 276, 1175, 1506, 2043, 2046
BlsI	GCNGC	8 cut(s)	268, 271, 274, 277, 1176, 1507, 2044, 2047
Bme1390I	CCNGG	4 cut(s)	220, 359, 1338, 2338
Bme18I	GGWCC	2 cut(s)	1100, 2114
BmeRI	GACNNNNNGTC	1 cut(s)	2482
BmeT110I	CYCGRG	1 cut(s)	2480
BmgBI	CACGTC	1 cut(s)	1495
BmgT120I	GGNCC	5 cut(s)	178, 320, 1100, 2114, 2320
BmiI	GGNNCC	4 cut(s)	1570, 2116, 2321, 2588
BmrFI	CCNGG	4 cut(s)	220, 359, 1338, 2338
BmrI	ACTGGG	1 cut(s)	857
BmsI	GCATC	9 cut(s)	562, 580, 825, 934, 970, 1615, 1785, 1841, 1993
BmuI	ACTGGG	1 cut(s)	857
BoxI	GACNNNNGTC	1 cut(s)	683
BpiI	GAAGAC	2 cut(s)	679, 2271
BpuEI	CTTGAG	4 cut(s)	1634, 1963, 2290, 2327
BpuMI	CCSGG	2 cut(s)	1338, 2338
BsaAI	YACGTR	1 cut(s)	2385
BsaBI	GATNNNNATC	1 cut(s)	1799
BsaHI	GRCGYC	1 cut(s)	2528
BsaI	GGTCTC	2 cut(s)	357, 1093
BsaJI	CCNNGG	5 cut(s)	81, 358, 999, 1359, 2337
BsaWI	WCCGGW	2 cut(s)	423, 606
Bsc4I	CCNNNNNNNGG	4 cut(s)	1365, 1382, 1415, 2624
Bse1I	ACTGG	3 cut(s)	323, 852, 1572
Bse3DI	GCAATG	1 cut(s)	2676
Bse8I	GATNNNNATC	1 cut(s)	1799
BseAI	TCCGGA	1 cut(s)	423
BseBI	CCWGG	2 cut(s)	220, 359
BseDI	CCNNGG	5 cut(s)	81, 358, 999, 1359, 2337
BseGI	GGATG	6 cut(s)	99, 509, 1184, 1370, 2008, 2137
BseJI	GATNNNNATC	1 cut(s)	1799
BseLI	CCNNNNNNNGG	4 cut(s)	1365, 1382, 1415, 2624
BseMI	GCAATG	1 cut(s)	2676
BseMII	CTCAG	2 cut(s)	834, 1419
BseNI	ACTGG	3 cut(s)	323, 852, 1572
BseRI	GAGGAG	1 cut(s)	2669
BseSI	GKGCMC	2 cut(s)	2278, 2412
BseXI	GCAGC	8 cut(s)	256, 259, 278, 287, 1186, 1492, 2029, 2032
BshFI	GGCC	8 cut(s)	80, 179, 322, 671, 1336, 1763, 2304, 2322
BshNI	GGYRCC	1 cut(s)	1568
BsiHKAI	GWGCWC	3 cut(s)	431, 885, 2412
BsiHKCI	CYCGRG	1 cut(s)	2480
BsiSI	CCGG	4 cut(s)	424, 607, 1337, 2337
BslFI	GGGAC	1 cut(s)	254
BslI	CCNNNNNNNGG	4 cut(s)	1365, 1382, 1415, 2624
BsmAI	GTCTC	4 cut(s)	357, 1093, 2490, 2640
BsmBI	CGTCTC	1 cut(s)	2640
BsmFI	GGGAC	1 cut(s)	254
BsmI	GAATGC	2 cut(s)	301, 1927
BsnI	GGCC	8 cut(s)	80, 179, 322, 671, 1336, 1763, 2304, 2322
Bso31I	GGTCTC	2 cut(s)	357, 1093
BsoBI	CYCGRG	1 cut(s)	2480
Bsp1286I	GDGCHC	4 cut(s)	431, 885, 2278, 2412
Bsp13I	TCCGGA	1 cut(s)	423
Bsp1407I	TGTACA	1 cut(s)	853
Bsp143I	GATC	8 cut(s)	130, 283, 288, 709, 1069, 1450, 1661, 1882
Bsp19I	CCATGG	2 cut(s)	81, 999
BspACI	CCGC	1 cut(s)	1508
BspANI	GGCC	8 cut(s)	80, 179, 322, 671, 1336, 1763, 2304, 2322
BspCNI	CTCAG	2 cut(s)	833, 1420
BspEI	TCCGGA	1 cut(s)	423
BspHI	TCATGA	1 cut(s)	2244
BspLI	GGNNCC	4 cut(s)	1570, 2116, 2321, 2588
BspMAI	CTGCAG	1 cut(s)	277
BspPI	GGATC	3 cut(s)	1445, 1656, 1890
BspQI	GCTCTTC	2 cut(s)	1536, 2013
BspT107I	GGYRCC	1 cut(s)	1568
BspTI	CTTAAG	1 cut(s)	1082
BspTNI	GGTCTC	2 cut(s)	357, 1093
BsrDI	GCAATG	1 cut(s)	2676
BsrGI	TGTACA	1 cut(s)	853
BsrI	ACTGG	3 cut(s)	323, 852, 1572
BssECI	CCNNGG	5 cut(s)	81, 358, 999, 1359, 2337
BssMI	GATC	8 cut(s)	130, 283, 288, 709, 1069, 1450, 1661, 1882
BssNI	GRCGYC	1 cut(s)	2528
BssT1I	CCWWGG	3 cut(s)	81, 999, 1359
Bst2UI	CCWGG	2 cut(s)	220, 359
Bst6I	CTCTTC	2 cut(s)	1536, 2013
BstACI	GRCGYC	1 cut(s)	2528
BstAFI	CTTAAG	1 cut(s)	1082
BstAPI	GCANNNNNTGC	2 cut(s)	272, 1922
BstAUI	TGTACA	1 cut(s)	853
BstBAI	YACGTR	1 cut(s)	2385
BstC8I	GCNNGC	3 cut(s)	309, 1579, 2187
BstDEI	CTNAG	3 cut(s)	820, 1428, 2195
BstDSI	CCRYGG	2 cut(s)	81, 999
BstEII	GGTNACC	1 cut(s)	1441
BstF5I	GGATG	6 cut(s)	99, 509, 1184, 1370, 2008, 2137
BstKTI	GATC	8 cut(s)	133, 286, 291, 712, 1072, 1453, 1664, 1885
BstMAI	GTCTC	4 cut(s)	357, 1093, 2490, 2640
BstMBI	GATC	8 cut(s)	130, 283, 288, 709, 1069, 1450, 1661, 1882
BstNI	CCWGG	2 cut(s)	220, 359
BstNSI	RCATGY	1 cut(s)	2189
BstPAI	GACNNNNGTC	1 cut(s)	683
BstPI	GGTNACC	1 cut(s)	1441
BstSCI	CCNGG	4 cut(s)	218, 357, 1336, 2336
BstSFI	CTRYAG	4 cut(s)	273, 984, 1989, 2293
BstSLI	GKGCMC	2 cut(s)	2278, 2412
BstV1I	GCAGC	8 cut(s)	256, 259, 278, 287, 1186, 1492, 2029, 2032
BstV2I	GAAGAC	2 cut(s)	679, 2271
BstX2I	RGATCY	5 cut(s)	283, 1069, 1450, 1661, 1882
BstYI	RGATCY	5 cut(s)	283, 1069, 1450, 1661, 1882
BsuI	GTATCC	2 cut(s)	1633, 1894
BsuRI	GGCC	8 cut(s)	80, 179, 322, 671, 1336, 1763, 2304, 2322
BtgI	CCRYGG	2 cut(s)	81, 999
BtgZI	GCGATG	1 cut(s)	1230
BtrI	CACGTC	1 cut(s)	1495
BtsCI	GGATG	6 cut(s)	99, 509, 1184, 1370, 2008, 2137
BtsI	GCAGTG	1 cut(s)	1818
BtsIMutI	CAGTG	3 cut(s)	330, 1579, 1818
Cac8I	GCNNGC	3 cut(s)	309, 1579, 2187
CaiI	CAGNNNCTG	2 cut(s)	272, 1700
CciI	TCATGA	1 cut(s)	2244
Cfr13I	GGNCC	5 cut(s)	178, 320, 1100, 2114, 2320
CseI	GACGC	2 cut(s)	2517, 2622
Csp6I	GTAC	5 cut(s)	377, 854, 1128, 1458, 2386
CviQI	GTAC	5 cut(s)	377, 854, 1128, 1458, 2386
DdeI	CTNAG	3 cut(s)	820, 1428, 2195
DpnI	GATC	8 cut(s)	132, 285, 290, 711, 1071, 1452, 1663, 1884
DpnII	GATC	8 cut(s)	130, 283, 288, 709, 1069, 1450, 1661, 1882
DraI	TTTAAA	1 cut(s)	804
DriI	GACNNNNNGTC	1 cut(s)	2482
EaeI	YGGCCR	4 cut(s)	78, 669, 1334, 1761
Eam1104I	CTCTTC	2 cut(s)	1536, 2013
Eam1105I	GACNNNNNGTC	1 cut(s)	2482
EarI	CTCTTC	2 cut(s)	1536, 2013
Ecl136II	GAGCTC	2 cut(s)	429, 883
Eco130I	CCWWGG	3 cut(s)	81, 999, 1359
Eco24I	GRGCYC	2 cut(s)	431, 885
Eco31I	GGTCTC	2 cut(s)	357, 1093
Eco47I	GGWCC	2 cut(s)	1100, 2114
Eco53kI	GAGCTC	2 cut(s)	429, 883
Eco57I	CTGAAG	1 cut(s)	1994
Eco88I	CYCGRG	1 cut(s)	2480
Eco91I	GGTNACC	1 cut(s)	1441
EcoICRI	GAGCTC	2 cut(s)	429, 883
EcoO109I	RGGNCCY	1 cut(s)	2320
EcoO65I	GGTNACC	1 cut(s)	1441
EcoRI	GAATTC	1 cut(s)	890
EcoRII	CCWGG	2 cut(s)	218, 357
EcoT14I	CCWWGG	3 cut(s)	81, 999, 1359
EcoT22I	ATGCAT	1 cut(s)	1927
EcoT38I	GRGCYC	2 cut(s)	431, 885
ErhI	CCWWGG	3 cut(s)	81, 999, 1359
Esp3I	CGTCTC	1 cut(s)	2640
FalI	AAGNNNNNCTT	6 cut(s)	504, 536, 1406, 1438, 1596, 1628
FaqI	GGGAC	1 cut(s)	254
FbaI	TGATCA	1 cut(s)	288
FblI	GTMKAC	1 cut(s)	1728
Fnu4HI	GCNGC	8 cut(s)	267, 270, 273, 276, 1175, 1506, 2043, 2046
FokI	GGATG	6 cut(s)	86, 516, 1171, 1377, 2015, 2144
FriOI	GRGCYC	2 cut(s)	431, 885
Fsp4HI	GCNGC	8 cut(s)	267, 270, 273, 276, 1175, 1506, 2043, 2046
FspBI	CTAG	5 cut(s)	681, 720, 995, 1824, 2289
GluI	GCNGC	8 cut(s)	267, 270, 273, 276, 1175, 1506, 2043, 2046
HaeIII	GGCC	8 cut(s)	80, 179, 322, 671, 1336, 1763, 2304, 2322
HapII	CCGG	4 cut(s)	424, 607, 1337, 2337
HgaI	GACGC	2 cut(s)	2517, 2622
Hin1I	GRCGYC	1 cut(s)	2528
HincII	GTYRAC	2 cut(s)	1065, 1277
HindII	GTYRAC	2 cut(s)	1065, 1277
HindIII	AAGCTT	1 cut(s)	2072
HpaII	CCGG	4 cut(s)	424, 607, 1337, 2337
HphI	GGTGA	2 cut(s)	1861, 2523
Hpy166II	GTNNAC	9 cut(s)	697, 729, 845, 854, 1065, 1277, 1675, 1729, 2410
Hpy188I	TCNGA	8 cut(s)	187, 288, 443, 709, 1377, 1410, 1652, 1910
Hpy8I	GTNNAC	9 cut(s)	697, 729, 845, 854, 1065, 1277, 1675, 1729, 2410
Hpy99I	CGWCG	1 cut(s)	890
HpyCH4IV	ACGT	7 cut(s)	255, 860, 1244, 1279, 1494, 2384, 2643
HpyF3I	CTNAG	3 cut(s)	820, 1428, 2195
HpySE526I	ACGT	7 cut(s)	255, 860, 1244, 1279, 1494, 2384, 2643
Hsp92I	GRCGYC	1 cut(s)	2528
Kpn2I	TCCGGA	1 cut(s)	423
Ksp22I	TGATCA	1 cut(s)	288
Kzo9I	GATC	8 cut(s)	130, 283, 288, 709, 1069, 1450, 1661, 1882
LguI	GCTCTTC	2 cut(s)	1536, 2013
LmnI	GCTCC	4 cut(s)	426, 434, 2165, 2656
Lsp1109I	GCAGC	8 cut(s)	256, 259, 278, 287, 1186, 1492, 2029, 2032
LweI	GCATC	9 cut(s)	562, 580, 825, 934, 970, 1615, 1785, 1841, 1993
MaeI	CTAG	5 cut(s)	681, 720, 995, 1824, 2289
MaeII	ACGT	7 cut(s)	255, 860, 1244, 1279, 1494, 2384, 2643
MaeIII	GTNAC	9 cut(s)	325, 1245, 1441, 1754, 1814, 1867, 2200, 2255, 2529
MalI	GATC	8 cut(s)	132, 285, 290, 711, 1071, 1452, 1663, 1884
MboI	GATC	8 cut(s)	130, 283, 288, 709, 1069, 1450, 1661, 1882
MboII	GAAGA	9 cut(s)	43, 662, 679, 1523, 2000, 2006, 2113, 2227, 2276
MfeI	CAATTG	1 cut(s)	2049
MflI	RGATCY	5 cut(s)	283, 1069, 1450, 1661, 1882
MhlI	GDGCHC	4 cut(s)	431, 885, 2278, 2412
MlsI	TGGCCA	3 cut(s)	80, 671, 1763
MluNI	TGGCCA	3 cut(s)	80, 671, 1763
MlyI	GAGTC	4 cut(s)	236, 452, 693, 2492
MmeI	TCCRAC	3 cut(s)	1400, 1873, 1888
Mox20I	TGGCCA	3 cut(s)	80, 671, 1763
Mph1103I	ATGCAT	1 cut(s)	1927
MroI	TCCGGA	1 cut(s)	423
MroXI	GAANNNNTTC	1 cut(s)	1979
MscI	TGGCCA	3 cut(s)	80, 671, 1763
MseI	TTAA	8 cut(s)	566, 803, 1083, 1194, 1437, 1841, 1889, 2523
MslI	CAYNNNNRTG	1 cut(s)	2405
Msp20I	TGGCCA	3 cut(s)	80, 671, 1763
MspA1I	CMGCKG	1 cut(s)	269
MspCI	CTTAAG	1 cut(s)	1082
MspI	CCGG	4 cut(s)	424, 607, 1337, 2337
MspR9I	CCNGG	4 cut(s)	220, 359, 1338, 2338
MunI	CAATTG	1 cut(s)	2049
Mva1269I	GAATGC	2 cut(s)	301, 1927
MvaI	CCWGG	2 cut(s)	220, 359
NciI	CCSGG	2 cut(s)	1338, 2338
NcoI	CCATGG	2 cut(s)	81, 999
NdeII	GATC	8 cut(s)	130, 283, 288, 709, 1069, 1450, 1661, 1882
NlaIV	GGNNCC	4 cut(s)	1570, 2116, 2321, 2588
NmuCI	GTSAC	4 cut(s)	325, 1867, 2200, 2529
NsiI	ATGCAT	1 cut(s)	1927
NspI	RCATGY	1 cut(s)	2189
PaeI	GCATGC	1 cut(s)	2189
PaeR7I	CTCGAG	1 cut(s)	2480
PagI	TCATGA	1 cut(s)	2244
PciSI	GCTCTTC	2 cut(s)	1536, 2013
PcsI	WCGNNNNNNNCGW	1 cut(s)	2630
PctI	GAATGC	2 cut(s)	301, 1927
PdmI	GAANNNNTTC	1 cut(s)	1979
PflMI	CCANNNNNTGG	1 cut(s)	1365
PkrI	GCNGC	8 cut(s)	268, 271, 274, 277, 1176, 1507, 2044, 2047
PleI	GAGTC	4 cut(s)	236, 452, 692, 2491
PpsI	GAGTC	4 cut(s)	236, 452, 692, 2491
Ppu21I	YACGTR	1 cut(s)	2385
PshAI	GACNNNNGTC	1 cut(s)	683
Psp124BI	GAGCTC	2 cut(s)	431, 885
Psp1406I	AACGTT	1 cut(s)	255
Psp6I	CCWGG	2 cut(s)	218, 357
PspEI	GGTNACC	1 cut(s)	1441
PspGI	CCWGG	2 cut(s)	218, 357
PspN4I	GGNNCC	4 cut(s)	1570, 2116, 2321, 2588
PspPI	GGNCC	5 cut(s)	178, 320, 1100, 2114, 2320
PspXI	VCTCGAGB	1 cut(s)	2480
PstI	CTGCAG	1 cut(s)	277
PstNI	CAGNNNCTG	2 cut(s)	272, 1700
PsuI	RGATCY	5 cut(s)	283, 1069, 1450, 1661, 1882
PvuII	CAGCTG	1 cut(s)	269
RsaI	GTAC	5 cut(s)	378, 855, 1129, 1459, 2387
RsaNI	GTAC	5 cut(s)	377, 854, 1128, 1458, 2386
RseI	CAYNNNNRTG	1 cut(s)	2405
SacI	GAGCTC	2 cut(s)	431, 885
SapI	GCTCTTC	2 cut(s)	1536, 2013
SaqAI	TTAA	8 cut(s)	566, 803, 1083, 1194, 1437, 1841, 1889, 2523
SatI	GCNGC	8 cut(s)	267, 270, 273, 276, 1175, 1506, 2043, 2046
Sau3AI	GATC	8 cut(s)	130, 283, 288, 709, 1069, 1450, 1661, 1882
Sau96I	GGNCC	5 cut(s)	178, 320, 1100, 2114, 2320
SchI	GAGTC	4 cut(s)	236, 452, 693, 2492
ScrFI	CCNGG	4 cut(s)	220, 359, 1338, 2338
SduI	GDGCHC	4 cut(s)	431, 885, 2278, 2412
SfaNI	GCATC	9 cut(s)	562, 580, 825, 934, 970, 1615, 1785, 1841, 1993
SfcI	CTRYAG	4 cut(s)	273, 984, 1989, 2293
Sfr274I	CTCGAG	1 cut(s)	2480
SinI	GGWCC	2 cut(s)	1100, 2114
SlaI	CTCGAG	1 cut(s)	2480
SmiMI	CAYNNNNRTG	1 cut(s)	2405
SmlI	CTYRAG	6 cut(s)	1082, 1613, 1942, 2269, 2306, 2480
SmoI	CTYRAG	6 cut(s)	1082, 1613, 1942, 2269, 2306, 2480
SphI	GCATGC	1 cut(s)	2189
SsiI	CCGC	1 cut(s)	1508
SspI	AATATT	2 cut(s)	315, 2090
SspMI	CTAG	5 cut(s)	681, 720, 995, 1824, 2289
SstI	GAGCTC	2 cut(s)	431, 885
StyD4I	CCNGG	4 cut(s)	218, 357, 1336, 2336
StyI	CCWWGG	3 cut(s)	81, 999, 1359
TaiI	ACGT	7 cut(s)	258, 863, 1247, 1282, 1497, 2387, 2646
TaqI	TCGA	7 cut(s)	140, 809, 833, 885, 2348, 2429, 2481
TaqII	GACCGA	1 cut(s)	2219
TatI	WGTACW	2 cut(s)	853, 1127
Tru1I	TTAA	8 cut(s)	566, 803, 1083, 1194, 1437, 1841, 1889, 2523
Tru9I	TTAA	8 cut(s)	566, 803, 1083, 1194, 1437, 1841, 1889, 2523
TscAI	CASTG	3 cut(s)	330, 1579, 1825
TseFI	GTSAC	4 cut(s)	325, 1867, 2200, 2529
TseI	GCWGC	8 cut(s)	266, 269, 272, 275, 1174, 1505, 2042, 2045
Tsp45I	GTSAC	4 cut(s)	325, 1867, 2200, 2529
TspGWI	ACGGA	1 cut(s)	2144
TspRI	CASTG	3 cut(s)	330, 1579, 1825
Van91I	CCANNNNNTGG	1 cut(s)	1365
Vha464I	CTTAAG	1 cut(s)	1082
VneI	GTGCAC	1 cut(s)	2408
VpaK11BI	GGWCC	2 cut(s)	1100, 2114
XapI	RAATTY	5 cut(s)	642, 890, 1619, 2460, 2647
XceI	RCATGY	1 cut(s)	2189
XcmI	CCANNNNNNNNNTGG	1 cut(s)	836
XhoI	CTCGAG	1 cut(s)	2480
XmiI	GTMKAC	1 cut(s)	1728
XmnI	GAANNNNTTC	1 cut(s)	1979
XspI	CTAG	5 cut(s)	681, 720, 995, 1824, 2289
Zsp2I	ATGCAT	1 cut(s)	1927

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.