Rorug03G0254500

Rop guanine nucleotide exchange factor

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
Physical Location & Seq
Reverse (-)
24126803 .. 24132232
5430 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0254500.1

Sequence Viewer

Length: 3048 bp
ATGGAGGACATGAGTGAGGACCAGAAAGCCATTGCTTGGCTTTGGGTCGTTGAAGGCCTCGCCACCATGAAACAAGTTGATGTTTCTCTCTTAACGGATTTGTTGGGTGAGATGGGTTCAGCATTACCTGATCATATGTCAAAAAATGCAAGGGAAAGGGTTGCTCTTAGATGTTTGGAGGAATTATTTGGCTCTAGTAATAATGGGATGAATAGTCATGTTCCATCTGCCCACAATTCTAAAGTCAGCTTTGATTTATCCCAAAGTTGCGAGACTGTCCTCAAACGCATTACCGATGAGACACCGGAATTTGATTTGCGAAACCCTGGACCGGGGCTGTTGAAATGGGATATTCACTCCTTTATTGTGCACAAAAAGGCTGCTTTGCCTAAATGTGCTTTGAAACAGTTGGAAGAGTCGATTCTTGATGGCTCCCATCCGCATGCTGATGTTTTGAGAGGAAAGAGCGGTTTAACAATGACAAGTGATGCTGATAGAGTTTCTGCGAATGAAAGTAATCAAAGTCTAAATAAGAGCTGCTATAGTGCTCAAAACATGGGAGTAGAAGGGAACTCAGAGAATGAAAATCTATTGCTTTCCGAAAGGGGTGGGATTGGATCCGATAATGAAAAGCGTGAAAGGGTAAATGATTCTGATGATTGGCATATTGAAGCGAAAAAGATGAAGTGGGATGCCTCATATGTTTCACAGTCCATAGAAGTAAAGCAGAACCAAATTTCTTTAGATGGAAGAGAATGCTTGCAAGATACATCTGAAAGACATGTTCCAGTTTCTGTGAGTGAAAGGTGTGACGTGGCAGAAAATCAGATGGCAATGGAGCAAAACAGGGTAGAAGATGGTCACAGTGATTATGCTGCGTCAAAGAGATATGGACAGAGCAGTGATGATGCAATCCATAAGGATCAGAGAGAAAATCATTCTAATCCGACTTCAGTACCTCGGGATACATTTCAGGATAAAGTCCACCAATATACTTGTGTTGCTGAAGCCAAAGATGATGGTGGACTTCATTGCAAACTAAGAGTATCAAATGTTGCTCCTCTAGGTGAAACCCAGCATAAGATTTCTACTAAAGGATTCAGTTGTAATAGTGAGCATGATGCTCATATCAGAGTACCGCTTCTTTCATCCACAGATGAATCTCAAAAACTAAGCAATGCTGATGAAGGCAATGGCCGGGATCCTGGAAATATGGCTGGTGAAAACCTTAAAAGGGTAAATTGCTCTAATGATTTCCATATAAGAGCCAAAAGGAGGGAGTGGGATGCCTATTATGTTTTACAGTCTATAGAACAGAATCAACTTCCTTTATATTCAGAAGATTCATCCGAAAGAGATGTTCCAGTTTCTGAGAGTTTAAGGTGTGACTTGGCTGAAAATCAGATGGAAATGATGGAGGAAATCAGGGCCTTAGAGGATGGTCATGATGATTATACCGAGTCAAAGAGGAATGGACAAAGCACTTATGATGCAACCCATCAGAGTCGGTTGGAGAATTGTTGTAATGCCGCTTCAATGCCTCAAGACACAATTCAGGATGAAGCCCGTCAACATACATGTGTTAATCAAACCAAAGATGATGATGGGCTTCAGCTTGAACTAAGAGCATCAGGTGTTGCTGCTCCAGAGGAATCCCAGCATACAGTGTCTGCTAAAGTATTCAGTGATAACACTGCTAATGATTTTCATATTAAAGTGCTACACCCTGCAACCACAGATGGACCGCAATGGAAGAGCCTTGCTAATAGACACAAAGACGATTATGAGCATTGTTCGAAACCAAGTTCATCAGGTGTTGCTTCTCTAAATGAAACCCAGCAGAAGAATTCTACTCAACAATCTGATTGTGTCAGTGAACGTGATTCTCATATTAAAGTATCATACCCTGCATATATAGATGGATCCCAGCAGAAGAACATTGCTGATAAATCCAAAGAGCTCATGGATTTTCTTTGTGAGTCAGAGACATCAAATGAAAGTGATGGTTTTCATGATAAAAAGATTGATGCTGCCATGAAGAAGCATGCTTTCTTGAGATCTCAATGCACGTCTAGTCATGATTCCTTAGTGACAACAGTCACAGAGAAAAATCGTTCCCTGTACTCTAATGAAGGTGGTCAATTATTGACTTGTAAAACAAGTAATTGCCCTGTGGTGGTTCATGAGAACTGGCTACGTTCCTCAGCCATTTCTTTTGAGAAGGGTAACTTTTATTGCCCCTTCTGTTCATATGCTCTTGCCCTTACTGATTACCTTGAAGCTAGGAAACAAACTTCCCTGTTAAAGACAGGACTAAATGCATTTGTTCATGCTAATTTGGAAAACCGACCGATGGAACCTGTTGGAACAGTACATAGCAAAGTGAATAATTGCTCTAGGCATTTTGAGGATAATCTTCTTGGGAAACCTTATCAGAATAGGCATCTGGAAGAGCGTGAAGAAAATCAGGGAAATCAATGTGAAGAACATGTAAATGAAGTTGATGATGTCCAGTTTCACAATATTATTTATGATAAGCAACAAGGACCACCTTCTTCATCATGCACTGACATCAAGTCTATGCGTGGAAAAGTTCATGTACCAGCTGGTGAGAAAGAAGGGGAAGAAAAGTTAGTCCATGAGTGTGTGTCAGCAGGCCTTGATAGATTTCAGAACCAAGTACTGGAAGGTGATCATTTGTCCAGTAAAAACACACAGAGCCTCCTTGTTGACCAAGGACAAGCTGGTGCAGTAGAAGTCGTGCAGCAGCACATTACTGATTACTCCTTAAGAAAAAGGAGCAAATCTCCTTGCACCTGCACCCAGCTGGCAACAACTCAGTCAAGGAAAAAAAAGGTTCCATGGACAGTTGAGGAAGAAGAGATGCTCAAGAAGGGAGTGCAGGAATTTCAATGCAATGATGAAACAAGAATGCCATGGAAGCAAATATTTGAATTTGGTTCTGATGTGTTTCTGTCAGGCCGTACCCCAACAGACCTTAAGGACAAATGGAGGAACATATGCAAAGGAAGTCCAAAGTCGAAATGA

Protein Analysis

1015

Amino Acids

113.85

Weight (kDa)

5.41

Isoelectric Point (pI)

52.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myb_DNA-binding PF00249 952 - 1006 1.5e-06 Myb-like DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2825
Acc36I ACCTGC 1 cut(s) 2825
AccB7I CCANNNNNTGG 2 cut(s) 36, 2683
AccBSI CCGCTC 1 cut(s) 468
AciI CCGC 5 cut(s) 440, 468, 1139, 1530, 1745
AclWI GGATC 7 cut(s) 612, 625, 930, 1196, 1209, 1917, 1930
AcoI YGGCCR 1 cut(s) 1195
AcsI RAATTY 5 cut(s) 308, 735, 1846, 2906, 2954
AcuI CTGAAG 3 cut(s) 936, 1026, 1595
AfaI GTAC 7 cut(s) 957, 1137, 2123, 2373, 2601, 2682, 2986
AfiI CCNNNNNNNGG 8 cut(s) 36, 331, 332, 1234, 1275, 2176, 2353, 2683
AflII CTTAAG 2 cut(s) 2788, 2999
AflIII ACRYGT 3 cut(s) 781, 1577, 2488
AgsI TTSAA 9 cut(s) 53, 343, 403, 671, 1536, 1619, 2279, 2912, 2954
AhdI GACNNNNNGTC 1 cut(s) 2575
AjiI CACGTC 2 cut(s) 814, 2070
AjnI CCWGG 2 cut(s) 325, 1204
AluBI AGCT 8 cut(s) 249, 537, 1615, 1960, 2282, 2606, 2744, 2827
AluI AGCT 8 cut(s) 249, 537, 1615, 1960, 2282, 2606, 2744, 2827
Alw21I GWGCWC 3 cut(s) 372, 550, 1962
Alw26I GTCTC 3 cut(s) 266, 293, 1979
Alw44I GTGCAC 1 cut(s) 368
AlwI GGATC 7 cut(s) 612, 625, 930, 1196, 1209, 1917, 1930
AlwNI CAGNNNCTG 3 cut(s) 794, 1370, 1670
Ama87I CYCGRG 1 cut(s) 960
AoxI GGCC 5 cut(s) 55, 1195, 1428, 2656, 2980
ApaLI GTGCAC 1 cut(s) 368
ApeKI GCWGC 7 cut(s) 380, 537, 875, 1640, 2030, 2764, 2767
ApoI RAATTY 5 cut(s) 308, 735, 1846, 2906, 2954
AspS9I GGNCC 5 cut(s) 19, 329, 1428, 1742, 2546
AsuC2I CCSGG 2 cut(s) 333, 1199
AsuHPI GGTGA 5 cut(s) 119, 1079, 1232, 2621, 2702
AsuII TTCGAA 1 cut(s) 1796
AvaI CYCGRG 1 cut(s) 960
AvaII GGWCC 4 cut(s) 19, 329, 1742, 2546
BaeGI GKGCMC 1 cut(s) 372
BaeI ACNNNNGTAYC 2 cut(s) 939, 972
BamHI GGATCC 3 cut(s) 617, 1201, 1922
BanII GRGCYC 1 cut(s) 1962
BarI GAAGNNNNNNTAC 2 cut(s) 1516, 1548
Bbv12I GWGCWC 3 cut(s) 372, 550, 1962
BbvCI CCTCAGC 1 cut(s) 2203
BbvI GCAGC 7 cut(s) 367, 524, 862, 1627, 2017, 2776, 2779
BceAI ACGGC 1 cut(s) 2967
BciT130I CCWGG 2 cut(s) 327, 1206
BciVI GTATCC 1 cut(s) 958
BclI TGATCA 2 cut(s) 130, 2692
BcnI CCSGG 2 cut(s) 333, 1199
BcoDI GTCTC 3 cut(s) 266, 293, 1979
BfaI CTAG 5 cut(s) 195, 1064, 2073, 2283, 2397
BfmI CTRYAG 2 cut(s) 541, 1308
BfrI CTTAAG 2 cut(s) 2788, 2999
BfuAI ACCTGC 1 cut(s) 2825
BfuI GTATCC 1 cut(s) 958
BglII AGATCT 1 cut(s) 2057
BisI GCNGC 8 cut(s) 381, 538, 876, 1530, 1641, 2031, 2765, 2768
BlsI GCNGC 8 cut(s) 382, 539, 877, 1531, 1642, 2032, 2766, 2769
BmcAI AGTACT 1 cut(s) 2682
Bme1390I CCNGG 4 cut(s) 327, 333, 1199, 1206
Bme18I GGWCC 4 cut(s) 19, 329, 1742, 2546
BmeRI GACNNNNNGTC 1 cut(s) 2575
BmeT110I CYCGRG 1 cut(s) 960
BmgBI CACGTC 2 cut(s) 814, 2070
BmgT120I GGNCC 5 cut(s) 19, 329, 1428, 1742, 2546
BmiI GGNNCC 6 cut(s) 433, 619, 1203, 1924, 2358, 2859
BmrFI CCNGG 4 cut(s) 327, 333, 1199, 1206
BoxI GACNNNNGTC 1 cut(s) 2096
BplI GAGNNNNNCTC 2 cut(s) 2791, 2823
BpmI CTGGAG 1 cut(s) 1629
Bpu10I CCTNAGC 1 cut(s) 2203
Bpu14I TTCGAA 1 cut(s) 1796
BpuEI CTTGAG 3 cut(s) 1527, 2074, 2873
BpuMI CCSGG 2 cut(s) 333, 1199
BsaJI CCNNGG 6 cut(s) 325, 332, 959, 2734, 2861, 2936
BsaWI WCCGGW 1 cut(s) 304
BsaXI ACNNNNNCTCC 2 cut(s) 2706, 2736
Bsc4I CCNNNNNNNGG 8 cut(s) 36, 331, 332, 1234, 1275, 2176, 2353, 2683
Bse1I ACTGG 6 cut(s) 788, 1364, 2195, 2512, 2688, 2703
Bse3DI GCAATG 8 cut(s) 30, 840, 1030, 1183, 1198, 1754, 1938, 2923
BseBI CCWGG 2 cut(s) 327, 1206
BseDI CCNNGG 6 cut(s) 325, 332, 959, 2734, 2861, 2936
BseGI GGATG 8 cut(s) 213, 436, 697, 1148, 1291, 1346, 1444, 1564
BseLI CCNNNNNNNGG 8 cut(s) 36, 331, 332, 1234, 1275, 2176, 2353, 2683
BseMI GCAATG 8 cut(s) 30, 840, 1030, 1183, 1198, 1754, 1938, 2923
BseMII CTCAG 4 cut(s) 588, 1362, 2217, 2852
BseNI ACTGG 6 cut(s) 788, 1364, 2195, 2512, 2688, 2703
BseRI GAGGAG 1 cut(s) 1050
BseSI GKGCMC 1 cut(s) 372
BseXI GCAGC 7 cut(s) 367, 524, 862, 1627, 2017, 2776, 2779
BseYI CCCAGC 5 cut(s) 1074, 1656, 1836, 1926, 2823
BsgI GTGCAG 4 cut(s) 2769, 2783, 2803, 2921
Bsh1285I CGRYCG 1 cut(s) 2351
BshFI GGCC 5 cut(s) 57, 1197, 1430, 2658, 2982
BsiEI CGRYCG 1 cut(s) 2351
BsiHKAI GWGCWC 3 cut(s) 372, 550, 1962
BsiHKCI CYCGRG 1 cut(s) 960
BsiSI CCGG 3 cut(s) 305, 332, 1198
BslI CCNNNNNNNGG 8 cut(s) 36, 331, 332, 1234, 1275, 2176, 2353, 2683
BsmAI GTCTC 3 cut(s) 266, 293, 1979
BsmI GAATGC 2 cut(s) 761, 2937
BsnI GGCC 5 cut(s) 57, 1197, 1430, 2658, 2982
BsoBI CYCGRG 1 cut(s) 960
Bsp119I TTCGAA 1 cut(s) 1796
Bsp1286I GDGCHC 3 cut(s) 372, 550, 1962
Bsp143I GATC 7 cut(s) 130, 617, 922, 1201, 1922, 2057, 2692
Bsp19I CCATGG 2 cut(s) 2861, 2936
BspACI CCGC 5 cut(s) 440, 468, 1139, 1530, 1745
BspANI GGCC 5 cut(s) 57, 1197, 1430, 2658, 2982
BspCNI CTCAG 4 cut(s) 587, 1363, 2216, 2851
BspHI TCATGA 4 cut(s) 1444, 2011, 2077, 2182
BspLI GGNNCC 6 cut(s) 433, 619, 1203, 1924, 2358, 2859
BspMI ACCTGC 1 cut(s) 2825
BspPI GGATC 7 cut(s) 612, 625, 930, 1196, 1209, 1917, 1930
BspQI GCTCTTC 2 cut(s) 1748, 2445
BspT104I TTCGAA 1 cut(s) 1796
BspTI CTTAAG 2 cut(s) 2788, 2999
BsrBI CCGCTC 1 cut(s) 468
BsrDI GCAATG 8 cut(s) 30, 840, 1030, 1183, 1198, 1754, 1938, 2923
BsrI ACTGG 6 cut(s) 788, 1364, 2195, 2512, 2688, 2703
BssECI CCNNGG 6 cut(s) 325, 332, 959, 2734, 2861, 2936
BssMI GATC 7 cut(s) 130, 617, 922, 1201, 1922, 2057, 2692
BssT1I CCWWGG 3 cut(s) 2734, 2861, 2936
Bst2UI CCWGG 2 cut(s) 327, 1206
Bst4CI ACNGT 9 cut(s) 277, 408, 711, 866, 1305, 1666, 2098, 2371, 2869
Bst6I CTCTTC 5 cut(s) 408, 745, 1748, 2445, 2874
BstAFI CTTAAG 2 cut(s) 2788, 2999
BstBI TTCGAA 1 cut(s) 1796
BstC8I GCNNGC 5 cut(s) 444, 761, 2046, 2656, 2829
BstDSI CCRYGG 2 cut(s) 2861, 2936
BstF5I GGATG 8 cut(s) 213, 436, 697, 1148, 1291, 1346, 1444, 1564
BstKTI GATC 7 cut(s) 133, 620, 925, 1204, 1925, 2060, 2695
BstMAI GTCTC 3 cut(s) 266, 293, 1979
BstMBI GATC 7 cut(s) 130, 617, 922, 1201, 1922, 2057, 2692
BstMCI CGRYCG 1 cut(s) 2351
BstMWI GCNNNNNNNGC 1 cut(s) 2941
BstNI CCWGG 2 cut(s) 327, 1206
BstNSI RCATGY 5 cut(s) 446, 785, 1581, 2048, 2492
BstPAI GACNNNNGTC 1 cut(s) 2096
BstSCI CCNGG 4 cut(s) 325, 331, 1197, 1204
BstSFI CTRYAG 2 cut(s) 541, 1308
BstSLI GKGCMC 1 cut(s) 372
BstV1I GCAGC 7 cut(s) 367, 524, 862, 1627, 2017, 2776, 2779
BstX2I RGATCY 4 cut(s) 617, 1201, 1922, 2057
BstYI RGATCY 4 cut(s) 617, 1201, 1922, 2057
BsuI GTATCC 1 cut(s) 958
BsuRI GGCC 5 cut(s) 57, 1197, 1430, 2658, 2982
BtgI CCRYGG 2 cut(s) 2861, 2936
BtrI CACGTC 2 cut(s) 814, 2070
BtsCI GGATG 8 cut(s) 213, 436, 697, 1148, 1291, 1346, 1444, 1564
BtsI GCAGTG 2 cut(s) 907, 1692
BtsIMutI CAGTG 7 cut(s) 871, 907, 1671, 1690, 1692, 1879, 2565
BveI ACCTGC 1 cut(s) 2825
Cac8I GCNNGC 5 cut(s) 444, 761, 2046, 2656, 2829
CaiI CAGNNNCTG 3 cut(s) 794, 1370, 1670
CciI TCATGA 4 cut(s) 1444, 2011, 2077, 2182
Cfr13I GGNCC 5 cut(s) 19, 329, 1428, 1742, 2546
CseI GACGC 1 cut(s) 867
Csp6I GTAC 7 cut(s) 956, 1136, 2122, 2372, 2600, 2681, 2985
CviQI GTAC 7 cut(s) 956, 1136, 2122, 2372, 2600, 2681, 2985
DpnI GATC 7 cut(s) 132, 619, 924, 1203, 1924, 2059, 2694
DpnII GATC 7 cut(s) 130, 617, 922, 1201, 1922, 2057, 2692
DriI GACNNNNNGTC 1 cut(s) 2575
EaeI YGGCCR 1 cut(s) 1195
Eam1104I CTCTTC 5 cut(s) 408, 745, 1748, 2445, 2874
Eam1105I GACNNNNNGTC 1 cut(s) 2575
EarI CTCTTC 5 cut(s) 408, 745, 1748, 2445, 2874
Ecl136II GAGCTC 1 cut(s) 1960
Eco130I CCWWGG 3 cut(s) 2734, 2861, 2936
Eco147I AGGCCT 2 cut(s) 57, 2658
Eco24I GRGCYC 1 cut(s) 1962
Eco47I GGWCC 4 cut(s) 19, 329, 1742, 2546
Eco53kI GAGCTC 1 cut(s) 1960
Eco57I CTGAAG 3 cut(s) 936, 1026, 1595
Eco88I CYCGRG 1 cut(s) 960
EcoICRI GAGCTC 1 cut(s) 1960
EcoO109I RGGNCCY 1 cut(s) 1428
EcoRI GAATTC 1 cut(s) 1846
EcoRII CCWGG 2 cut(s) 325, 1204
EcoT14I CCWWGG 3 cut(s) 2734, 2861, 2936
EcoT22I ATGCAT 1 cut(s) 2323
EcoT38I GRGCYC 1 cut(s) 1962
ErhI CCWWGG 3 cut(s) 2734, 2861, 2936
FalI AAGNNNNNCTT 2 cut(s) 2213, 2245
FauNDI CATATG 4 cut(s) 135, 700, 2251, 3020
FbaI TGATCA 2 cut(s) 130, 2692
Fnu4HI GCNGC 8 cut(s) 381, 538, 876, 1530, 1641, 2031, 2765, 2768
FokI GGATG 8 cut(s) 220, 423, 704, 1135, 1298, 1333, 1451, 1571
FriOI GRGCYC 1 cut(s) 1962
Fsp4HI GCNGC 8 cut(s) 381, 538, 876, 1530, 1641, 2031, 2765, 2768
FspBI CTAG 5 cut(s) 195, 1064, 2073, 2283, 2397
GluI GCNGC 8 cut(s) 381, 538, 876, 1530, 1641, 2031, 2765, 2768
GsaI CCCAGC 5 cut(s) 1078, 1660, 1840, 1930, 2827
GsuI CTGGAG 1 cut(s) 1629
HaeIII GGCC 5 cut(s) 57, 1197, 1430, 2658, 2982
HapII CCGG 3 cut(s) 305, 332, 1198
HgaI GACGC 1 cut(s) 867
HincII GTYRAC 2 cut(s) 1571, 2731
HindII GTYRAC 2 cut(s) 1571, 2731
HpaII CCGG 3 cut(s) 305, 332, 1198
HphI GGTGA 5 cut(s) 119, 1079, 1232, 2621, 2702
Hpy166II GTNNAC 6 cut(s) 370, 985, 1025, 1571, 1877, 2731
Hpy8I GTNNAC 6 cut(s) 370, 985, 1025, 1571, 1877, 2731
HpyCH4III ACNGT 9 cut(s) 277, 408, 711, 866, 1305, 1666, 2098, 2371, 2869
HpyCH4IV ACGT 4 cut(s) 813, 1879, 2069, 2197
HpyF10VI GCNNNNNNNGC 1 cut(s) 2941
HpySE526I ACGT 4 cut(s) 813, 1879, 2069, 2197
Ksp22I TGATCA 2 cut(s) 130, 2692
Kzo9I GATC 7 cut(s) 130, 617, 922, 1201, 1922, 2057, 2692
LguI GCTCTTC 2 cut(s) 1748, 2445
LmnI GCTCC 5 cut(s) 437, 838, 1063, 1648, 2799
Lsp1109I GCAGC 7 cut(s) 367, 524, 862, 1627, 2017, 2776, 2779
MaeI CTAG 5 cut(s) 195, 1064, 2073, 2283, 2397
MaeII ACGT 4 cut(s) 813, 1879, 2069, 2197
MaeIII GTNAC 6 cut(s) 809, 860, 1385, 2089, 2098, 2225
MalI GATC 7 cut(s) 132, 619, 924, 1203, 1924, 2059, 2694
MbiI CCGCTC 1 cut(s) 468
MboI GATC 7 cut(s) 130, 617, 922, 1201, 1922, 2057, 2692
MflI RGATCY 4 cut(s) 617, 1201, 1922, 2057
MhlI GDGCHC 3 cut(s) 372, 550, 1962
MlyI GAGTC 4 cut(s) 425, 1469, 1513, 1988
MmeI TCCRAC 4 cut(s) 390, 971, 1491, 2344
Mph1103I ATGCAT 1 cut(s) 2323
MslI CAYNNNNRTG 5 cut(s) 441, 447, 1578, 2493, 2643
MspA1I CMGCKG 2 cut(s) 2606, 2827
MspCI CTTAAG 2 cut(s) 2788, 2999
MspI CCGG 3 cut(s) 305, 332, 1198
MspR9I CCNGG 4 cut(s) 327, 333, 1199, 1206
Mva1269I GAATGC 2 cut(s) 761, 2937
MvaI CCWGG 2 cut(s) 327, 1206
MwoI GCNNNNNNNGC 1 cut(s) 2941
NciI CCSGG 2 cut(s) 333, 1199
NcoI CCATGG 2 cut(s) 2861, 2936
NdeI CATATG 4 cut(s) 135, 700, 2251, 3020
NdeII GATC 7 cut(s) 130, 617, 922, 1201, 1922, 2057, 2692
NlaIV GGNNCC 6 cut(s) 433, 619, 1203, 1924, 2358, 2859
NmuCI GTSAC 5 cut(s) 809, 860, 1385, 2089, 2098
NsiI ATGCAT 1 cut(s) 2323
NspI RCATGY 5 cut(s) 446, 785, 1581, 2048, 2492
NspV TTCGAA 1 cut(s) 1796
PaeI GCATGC 2 cut(s) 446, 2048
PagI TCATGA 4 cut(s) 1444, 2011, 2077, 2182
PaqCI CACCTGC 1 cut(s) 2825
PceI AGGCCT 2 cut(s) 57, 2658
PciI ACATGT 3 cut(s) 781, 1577, 2488
PciSI GCTCTTC 2 cut(s) 1748, 2445
PctI GAATGC 2 cut(s) 761, 2937
PfeI GAWTC 9 cut(s) 421, 650, 1098, 1160, 1318, 1343, 1652, 1883, 2081
PflMI CCANNNNNTGG 2 cut(s) 36, 2683
PfoI TCCNGGA 1 cut(s) 1204
PkrI GCNGC 8 cut(s) 382, 539, 877, 1531, 1642, 2032, 2766, 2769
PleI GAGTC 4 cut(s) 424, 1468, 1512, 1987
PpsI GAGTC 4 cut(s) 424, 1468, 1512, 1987
PscI ACATGT 3 cut(s) 781, 1577, 2488
PshAI GACNNNNGTC 1 cut(s) 2096
Psp124BI GAGCTC 1 cut(s) 1962
Psp6I CCWGG 2 cut(s) 325, 1204
PspFI CCCAGC 5 cut(s) 1074, 1656, 1836, 1926, 2823
PspGI CCWGG 2 cut(s) 325, 1204
PspN4I GGNNCC 6 cut(s) 433, 619, 1203, 1924, 2358, 2859
PspPI GGNCC 5 cut(s) 19, 329, 1428, 1742, 2546
PstNI CAGNNNCTG 3 cut(s) 794, 1370, 1670
PsuI RGATCY 4 cut(s) 617, 1201, 1922, 2057
PvuII CAGCTG 2 cut(s) 2606, 2827
RsaI GTAC 7 cut(s) 957, 1137, 2123, 2373, 2601, 2682, 2986
RsaNI GTAC 7 cut(s) 956, 1136, 2122, 2372, 2600, 2681, 2985
RseI CAYNNNNRTG 5 cut(s) 441, 447, 1578, 2493, 2643
SacI GAGCTC 1 cut(s) 1962
SapI GCTCTTC 2 cut(s) 1748, 2445
SatI GCNGC 8 cut(s) 381, 538, 876, 1530, 1641, 2031, 2765, 2768
Sau3AI GATC 7 cut(s) 130, 617, 922, 1201, 1922, 2057, 2692
Sau96I GGNCC 5 cut(s) 19, 329, 1428, 1742, 2546
ScaI AGTACT 1 cut(s) 2682
SchI GAGTC 4 cut(s) 425, 1469, 1513, 1988
ScrFI CCNGG 4 cut(s) 327, 333, 1199, 1206
SduI GDGCHC 3 cut(s) 372, 550, 1962
SfcI CTRYAG 2 cut(s) 541, 1308
SfuI TTCGAA 1 cut(s) 1796
SinI GGWCC 4 cut(s) 19, 329, 1742, 2546
SmiMI CAYNNNNRTG 5 cut(s) 441, 447, 1578, 2493, 2643
SmlI CTYRAG 5 cut(s) 1542, 2053, 2788, 2888, 2999
SmoI CTYRAG 5 cut(s) 1542, 2053, 2788, 2888, 2999
SphI GCATGC 2 cut(s) 446, 2048
SseBI AGGCCT 2 cut(s) 57, 2658
SsiI CCGC 5 cut(s) 440, 468, 1139, 1530, 1745
SspI AATATT 2 cut(s) 2524, 2949
SspMI CTAG 5 cut(s) 195, 1064, 2073, 2283, 2397
SstI GAGCTC 1 cut(s) 1962
StuI AGGCCT 2 cut(s) 57, 2658
StyD4I CCNGG 4 cut(s) 325, 331, 1197, 1204
StyI CCWWGG 3 cut(s) 2734, 2861, 2936
TaaI ACNGT 9 cut(s) 277, 408, 711, 866, 1305, 1666, 2098, 2371, 2869
TaiI ACGT 4 cut(s) 816, 1882, 2072, 2200
TaqI TCGA 3 cut(s) 419, 1796, 3041
TaqII GACCGA 1 cut(s) 2365
TatI WGTACW 3 cut(s) 2121, 2371, 2680
TauI GCSGC 1 cut(s) 1532
TfiI GAWTC 9 cut(s) 421, 650, 1098, 1160, 1318, 1343, 1652, 1883, 2081
TscAI CASTG 7 cut(s) 871, 907, 1671, 1690, 1699, 1879, 2572
TseFI GTSAC 5 cut(s) 809, 860, 1385, 2089, 2098
TseI GCWGC 7 cut(s) 380, 537, 875, 1640, 2030, 2764, 2767
Tsp45I GTSAC 5 cut(s) 809, 860, 1385, 2089, 2098
TspGWI ACGGA 1 cut(s) 110
TspRI CASTG 7 cut(s) 871, 907, 1671, 1690, 1699, 1879, 2572
Van91I CCANNNNNTGG 2 cut(s) 36, 2683
Vha464I CTTAAG 2 cut(s) 2788, 2999
VneI GTGCAC 1 cut(s) 368
VpaK11BI GGWCC 4 cut(s) 19, 329, 1742, 2546
XapI RAATTY 5 cut(s) 308, 735, 1846, 2906, 2954
XceI RCATGY 5 cut(s) 446, 785, 1581, 2048, 2492
XcmI CCANNNNNNNNNTGG 2 cut(s) 1960, 2741
XspI CTAG 5 cut(s) 195, 1064, 2073, 2283, 2397
ZrmI AGTACT 1 cut(s) 2682
Zsp2I ATGCAT 1 cut(s) 2323
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.