Rh6DG445300

Glutamate receptor

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
Physical Location & Seq
Forward (+)
61946425 .. 61950893
4469 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG445300.1

Sequence Viewer

Length: 2925 bp
ATGATCAACAAAAAGTACCCTTCCCACCTTAATAAGCTTGCTCTTATTTTTATCTTTTTCTTGTTTCTTTCTCCATCGATTTCGATGGCCAAGCCCCAAAACGAAAGCACTACTCCAGTGAATGTGGGGGTCGTTCTTGATGACCTTAATCATTCAGTTAGTGGGAAGATTTGGTTGAGTTGCATTGAAATGGCCCTCTCAGACTTCTATGTATCTCGTCCTCACTACAACACTAGGTTGGTCTTGAAAATCAGGGAGTACAAACAAAACAGTGTTCTCGGCGCAGCCAAAGCAGCTCTTGATCTCATAGAGAATGAACACGTGCAAGCCATCTTCGGACCAGTGACATCGATGGAGACGAGCTTTGTTATTAATCTTGGAGATCAAGCTCATGTGCCGATCATATCATTTTCTGCGACAAGTCCTTCTCTTACTTCACTCCGAAGCTCCTACTTTTTCCAATTTGCACAAAATGACGCATCCCAAGTGAAAGCTATAAGTGCGGTTATTAAAACTTTCCGTTGGAGACAAGTTGTGCCCATCTATACCGACAGTGTGTACGACGATGGAATGATACCGTTTTTAACTGATGCCTTACAAGAAGTTGATGCCCGTGTTCCCTACCGTATCGTTATTTCCCCTTCCGCAACTGATGATCAAATTGCAAGCGAGCTTTACAAGTTGAAAAGTATGCAAACTAGAGTCTTCATTGTCCATATGACAACGGATTTATGCTCTAAGCTATTTGTCAAGGCAGAAGAGATTGGAATGATGGATGAAGGCTATGCTTGGTTAATCACTACTGGAATTGCTAATCGTTTAACTTCGATGAATTCTTCAGTCCTCAATTCCATGAATGGAGTAGTAGGTGTGCAAACTTATGTCCAAAAAACAAGAGAACTTGAAGAATTCAAGCTCCGGTGGAAAAGGCAGTTCCGAAAGGACTACCCACTCGTCTTTGGTGCTAAATTGGATGTTTTTGGATTTTGGGCTTATGATGCTGCTTTTGCACTTGCAATGGCAATTGAACGGGTAATTGGAACTAGTAGTAGTTTCGGCTTCCAAAAGTCGAATGCTTCTAACAACTCGACAGGACTTGACACTTCTCATACCTCTGCATATGGTCCAAAACTTTCCGAAGCCTTGTCAACTACTAGATTTGAAGGCATCGCCGGCAATTTCAGCCTTGTTGATGGGCAACTTCAATCATCAAATTTTGGCATTGTCAATGTTGATGGTCGTGGACCACGATCAATTGGATTTTGGACACCGCAACATGGATTGGTGAGAAAATTGAACTCAGAAAGTTCTATACGCCATCTTGGACGGGTTATTTGGCCGGGTGATTCCCTTTCCGTTCCAAATGGATGGGTAAATAATCCAACTGATGGGAAGAAGTTGAGAGTAGGAGTTCCTGTCAAGAATAGTTTTTCTGAATTTGTTAGGGTTACGAAAGATCCTGTGACTAATCAAACGGATGTCACTGGATTCAGTATTGATGTTTTTAAGACTGCAGTGGACTTATTACCGTATGCTCTTCCTTATGAGTACATTCCCTTTGCAAACCCAGATGGCACCAGCGCCGGCAGTTACAATGACTTGTGCTATCAAGTATATCTTGGGAACTTTGATGCTGCGGTCGGAGATATAACAGTTACCAAAAACAGGTCGATTTATGTAGATTTTACAATGCCATATGAAGAAGCCGGTGTAGCAATGGTTGTGCCAGTCCGGAACATCAGGAGCAAGAATGCATGGATTTTCTTGAGGCCTTGGACATGGGATCTTTGGCTATCAACTTCTTGTTTCTTCCTCTTTATTGGTTTTGTGGTTTGGGTTCTCGAACATCGAATTAATGAAGATTTTCGCGGCCCTCCCTCACATCAAGTTGGCACGGGTCTCTGGTTCTCCTTCTCAACAATGGTTTTTGCACACACTGCCAAAGTTGTCAGCAATTTAGGTAGATTTGTGATGGCTGTATGGATATTTGTTGTGCTAGTGTTGACAATAAATTACACAGCCAATCTAACGTCACTATACACCGTTCAAAAACTCAAGCCAACTATAACCGATTTAAAGGATCTGCTAAGGGAGAGGGAAAACGTCGGCCTAATCAATCCTATTGTTTACCAACAGTTGAAACAAGTTGGTTTTAATTATTCTAAGATTAGGCGTTATCAGACTATGGAAGAAATTGATGAAGCTCTTTCAAAAGGGAGTGCAAACGGAGGTGTTGCTGCTGTTGTTGATGAAACCCCCTACATGATGCTTTTTCTTGCAAAATATTGCAACAAATATACCATGATTGGACCCTTCTCTAAAACAGATGGATTTGGCTTTGTGTTCCCGAAACAGTCTCCTATCCTACCTGATATATCATTAGCGGTCTTAAATATAATCAGGGGAGAGAAGATGACCAACATTAAAAGCAACTGGATCAAGAATGATAGCGATTGTCAAGGCTCAAGTACTGAGAAGGAATTTAGCAGTAGTATTGGCACTGATAGCTTTTGGGTCCTATTCCTGATTGCCGGGACGGCTTCAACACTCGCTCTCATCATATTTGTAGTTTCCTTCATTTATAGGCATAGGCACATCTTCAAGCAACCAGCTGATTCAAGACTCTCGACATGGACAAAGATTCAGACCATGTTTAAAATTTTCAACGAAAAAGACCCCAACTGTCGCGCCTTCAAATGTAGCCAACCGCCAAGTGCAGTTGAGGCCTCACCGGACCACTTCTATCCCCAAAGTCCGGTCATCGACAATTTGAGCCACGCAAACACCCATTCTGCATTGTCTGGAGAGCAACACACATCCTCAACTGATCAAGCCTCTCCAGAAATCGCCCCTGCAGCCACTGACGTTGTCGTGACCATTCAAGCAAGTACTCCTAGTCCTAGTACAGCTGAAGAAAACAATTAG

Protein Analysis

974

Amino Acids

108.62

Weight (kDa)

7.28

Isoelectric Point (pI)

34.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peripla_BP_6 PF13458 54 - 350 1.2e-19 Periplasmic binding protein
ANF_receptor PF01094 59 - 413 1.8e-76 Receptor family ligand binding region
Lig_chan-Glu_bd PF10613 484 - 576 2e-07 Ligated ion channel L-glutamate- and glycine-binding site
SBP_bac_3 PF00497 492 - 814 7.9e-06 Bacterial extracellular solute-binding proteins, family 3
Lig_chan PF00060 593 - 847 6.8e-35 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1574
AccB7I CCANNNNNTGG 1 cut(s) 1388
AccII CGCG 2 cut(s) 1869, 2688
AccIII TCCGGA 1 cut(s) 1731
AciI CCGC 7 cut(s) 503, 645, 1271, 1637, 1869, 2384, 2708
AclWI GGATC 4 cut(s) 1451, 1791, 2088, 2444
AcoI YGGCCR 2 cut(s) 87, 1337
AcsI RAATTY 6 cut(s) 832, 908, 1213, 1436, 2480, 2658
AcuI CTGAAG 1 cut(s) 822
AcvI CACGTG 1 cut(s) 322
AfaI GTAC 7 cut(s) 17, 260, 560, 1550, 2470, 2890, 2905
AfiI CCNNNNNNNGG 4 cut(s) 1277, 1388, 1665, 2755
AflIII ACRYGT 1 cut(s) 319
AhlI ACTAGT 1 cut(s) 1043
AjuI GAANNNNNNNTTGG 2 cut(s) 1020, 1052
Alw26I GTCTC 4 cut(s) 350, 520, 1904, 2361
AlwI GGATC 4 cut(s) 1451, 1791, 2088, 2444
AlwNI CAGNNNCTG 1 cut(s) 2861
Aor13HI TCCGGA 1 cut(s) 1731
AoxI GGCC 7 cut(s) 87, 192, 1337, 1769, 1870, 2107, 2724
ApeKI GCWGC 6 cut(s) 284, 293, 1001, 1634, 2237, 2855
ApoI RAATTY 6 cut(s) 832, 908, 1213, 1436, 2480, 2658
ArsI GACNNNNNNTTYG 2 cut(s) 1317, 1349
AseI ATTAAT 2 cut(s) 372, 1854
Asp700I GAANNNNTTC 1 cut(s) 1863
AspLEI GCGC 3 cut(s) 284, 1583, 2690
AspS9I GGNCC 8 cut(s) 193, 338, 1124, 1244, 1871, 2309, 2515, 2734
AsuC2I CCSGG 2 cut(s) 1341, 2533
AsuHPI GGTGA 3 cut(s) 1297, 1355, 2721
AvaII GGWCC 6 cut(s) 338, 1124, 1244, 2309, 2515, 2734
BaeGI GKGCMC 1 cut(s) 540
BalI TGGCCA 1 cut(s) 89
BanI GGYRCC 1 cut(s) 1574
BbrPI CACGTG 1 cut(s) 322
BbsI GAAGAC 1 cut(s) 697
BbvI GCAGC 6 cut(s) 296, 305, 988, 1621, 2224, 2867
BceAI ACGGC 1 cut(s) 2553
BclI TGATCA 3 cut(s) 3, 655, 2827
BcnI CCSGG 2 cut(s) 1341, 2533
BcoDI GTCTC 4 cut(s) 350, 520, 1904, 2361
BcuI ACTAGT 1 cut(s) 1043
BfaI CTAG 7 cut(s) 234, 699, 1044, 1155, 1997, 2895, 2901
BfmI CTRYAG 2 cut(s) 1512, 2853
BfoI RGCGCY 1 cut(s) 1584
BglI GCCNNNNNGGC 1 cut(s) 2537
BisI GCNGC 7 cut(s) 285, 294, 1002, 1635, 1870, 2238, 2856
BlsI GCNGC 7 cut(s) 286, 295, 1003, 1636, 1871, 2239, 2857
BmcAI AGTACT 2 cut(s) 2470, 2890
Bme1390I CCNGG 2 cut(s) 1341, 2533
Bme18I GGWCC 6 cut(s) 338, 1124, 1244, 2309, 2515, 2734
BmgT120I GGNCC 8 cut(s) 193, 338, 1124, 1244, 1871, 2309, 2515, 2734
BmiI GGNNCC 3 cut(s) 1576, 2311, 2516
BmrFI CCNGG 2 cut(s) 1341, 2533
BmsI GCATC 7 cut(s) 488, 580, 598, 988, 1176, 1621, 2256
BpiI GAAGAC 1 cut(s) 697
BpmI CTGGAG 3 cut(s) 99, 2823, 2823
Bpu10I CCTNAGC 1 cut(s) 2087
BpuEI CTTGAG 3 cut(s) 1786, 2039, 2449
BpuMI CCSGG 2 cut(s) 1341, 2533
Bsa29I ATCGAT 2 cut(s) 77, 350
BsaAI YACGTR 1 cut(s) 322
BsaI GGTCTC 1 cut(s) 1904
BsaJI CCNNGG 1 cut(s) 1772
BsaWI WCCGGW 4 cut(s) 918, 1731, 2731, 2755
BsaXI ACNNNNNCTCC 2 cut(s) 1401, 1431
Bsc4I CCNNNNNNNGG 4 cut(s) 1277, 1388, 1665, 2755
Bse118I RCCGGY 3 cut(s) 1172, 1583, 1706
Bse1I ACTGG 6 cut(s) 116, 341, 808, 1489, 1727, 2438
Bse3DI GCAATG 2 cut(s) 1023, 1722
BseAI TCCGGA 1 cut(s) 1731
BseCI ATCGAT 2 cut(s) 77, 350
BseDI CCNNGG 1 cut(s) 1772
BseGI GGATG 6 cut(s) 479, 781, 979, 1373, 1483, 2816
BseLI CCNNNNNNNGG 4 cut(s) 1277, 1388, 1665, 2755
BseMI GCAATG 2 cut(s) 1023, 1722
BseMII CTCAG 3 cut(s) 213, 1314, 2463
BseNI ACTGG 6 cut(s) 116, 341, 808, 1489, 1727, 2438
BseSI GKGCMC 1 cut(s) 540
BseXI GCAGC 6 cut(s) 296, 305, 988, 1621, 2224, 2867
BsgI GTGCAG 1 cut(s) 2736
Bsh1236I CGCG 2 cut(s) 1869, 2688
Bsh1285I CGRYCG 1 cut(s) 1641
BshFI GGCC 7 cut(s) 89, 194, 1339, 1771, 1872, 2109, 2726
BshNI GGYRCC 1 cut(s) 1574
BshVI ATCGAT 2 cut(s) 77, 350
BsiEI CGRYCG 1 cut(s) 1641
BsiSI CCGG 9 cut(s) 919, 1173, 1340, 1584, 1707, 1732, 2532, 2732, 2756
BslFI GGGAC 1 cut(s) 2548
BslI CCNNNNNNNGG 4 cut(s) 1277, 1388, 1665, 2755
BsmAI GTCTC 4 cut(s) 350, 520, 1904, 2361
BsmBI CGTCTC 1 cut(s) 350
BsmFI GGGAC 1 cut(s) 2548
BsmI GAATGC 2 cut(s) 1078, 1756
BsnI GGCC 7 cut(s) 89, 194, 1339, 1771, 1872, 2109, 2726
Bso31I GGTCTC 1 cut(s) 1904
Bsp1286I GDGCHC 1 cut(s) 540
Bsp13I TCCGGA 1 cut(s) 1731
BspACI CCGC 7 cut(s) 503, 645, 1271, 1637, 1869, 2384, 2708
BspANI GGCC 7 cut(s) 89, 194, 1339, 1771, 1872, 2109, 2726
BspCNI CTCAG 3 cut(s) 212, 1313, 2464
BspDI ATCGAT 2 cut(s) 77, 350
BspEI TCCGGA 1 cut(s) 1731
BspFNI CGCG 2 cut(s) 1869, 2688
BspLI GGNNCC 3 cut(s) 1576, 2311, 2516
BspMAI CTGCAG 2 cut(s) 1516, 2857
BspPI GGATC 4 cut(s) 1451, 1791, 2088, 2444
BspQI GCTCTTC 1 cut(s) 1542
BspT107I GGYRCC 1 cut(s) 1574
BspTNI GGTCTC 1 cut(s) 1904
BsrDI GCAATG 2 cut(s) 1023, 1722
BsrFI RCCGGY 3 cut(s) 1172, 1583, 1706
BsrI ACTGG 6 cut(s) 116, 341, 808, 1489, 1727, 2438
BssAI RCCGGY 3 cut(s) 1172, 1583, 1706
BssECI CCNNGG 1 cut(s) 1772
BssT1I CCWWGG 1 cut(s) 1772
Bst6I CTCTTC 2 cut(s) 753, 1542
BstAPI GCANNNNNTGC 1 cut(s) 1937
BstBAI YACGTR 1 cut(s) 322
BstC8I GCNNGC 6 cut(s) 39, 327, 667, 671, 1174, 1585
BstDEI CTNAG 6 cut(s) 199, 738, 1300, 2087, 2163, 2472
BstF5I GGATG 6 cut(s) 479, 781, 979, 1373, 1483, 2816
BstFNI CGCG 2 cut(s) 1869, 2688
BstH2I RGCGCY 1 cut(s) 1584
BstHHI GCGC 3 cut(s) 284, 1583, 2690
BstMAI GTCTC 4 cut(s) 350, 520, 1904, 2361
BstMCI CGRYCG 1 cut(s) 1641
BstSCI CCNGG 2 cut(s) 1339, 2531
BstSFI CTRYAG 2 cut(s) 1512, 2853
BstSLI GKGCMC 1 cut(s) 540
BstUI CGCG 2 cut(s) 1869, 2688
BstV1I GCAGC 6 cut(s) 296, 305, 988, 1621, 2224, 2867
BstV2I GAAGAC 1 cut(s) 697
BstX2I RGATCY 3 cut(s) 1456, 1783, 2080
BstXI CCANNNNNNTGG 1 cut(s) 1368
BstYI RGATCY 3 cut(s) 1456, 1783, 2080
Bsu15I ATCGAT 2 cut(s) 77, 350
BsuRI GGCC 7 cut(s) 89, 194, 1339, 1771, 1872, 2109, 2726
BsuTUI ATCGAT 2 cut(s) 77, 350
BtgZI GCGATG 1 cut(s) 1153
BtsCI GGATG 6 cut(s) 479, 781, 979, 1373, 1483, 2816
BtsI GCAGTG 2 cut(s) 1521, 1935
BtsIMutI CAGTG 9 cut(s) 123, 277, 348, 559, 1482, 1521, 1935, 2499, 2859
Cac8I GCNNGC 6 cut(s) 39, 327, 667, 671, 1174, 1585
CaiI CAGNNNCTG 1 cut(s) 2861
CfoI GCGC 3 cut(s) 284, 1583, 2690
Cfr10I RCCGGY 3 cut(s) 1172, 1583, 1706
Cfr13I GGNCC 8 cut(s) 193, 338, 1124, 1244, 1871, 2309, 2515, 2734
ClaI ATCGAT 2 cut(s) 77, 350
CseI GACGC 1 cut(s) 485
Csp6I GTAC 7 cut(s) 16, 259, 559, 1549, 2469, 2889, 2904
CspCI CAANNNNNGTGG 2 cut(s) 2848, 2883
CviAII CATG 9 cut(s) 392, 853, 1277, 1755, 1779, 2263, 2302, 2631, 2650
CviQI GTAC 7 cut(s) 16, 259, 559, 1549, 2469, 2889, 2904
DdeI CTNAG 6 cut(s) 199, 738, 1300, 2087, 2163, 2472
DraI TTTAAA 2 cut(s) 2076, 2656
EaeI YGGCCR 2 cut(s) 87, 1337
Eam1104I CTCTTC 2 cut(s) 753, 1542
EarI CTCTTC 2 cut(s) 753, 1542
Eco130I CCWWGG 1 cut(s) 1772
Eco147I AGGCCT 2 cut(s) 1771, 2726
Eco31I GGTCTC 1 cut(s) 1904
Eco47I GGWCC 6 cut(s) 338, 1124, 1244, 2309, 2515, 2734
Eco57I CTGAAG 1 cut(s) 822
Eco72I CACGTG 1 cut(s) 322
EcoO109I RGGNCCY 1 cut(s) 2515
EcoRI GAATTC 2 cut(s) 832, 908
EcoT14I CCWWGG 1 cut(s) 1772
EcoT22I ATGCAT 1 cut(s) 1756
ErhI CCWWGG 1 cut(s) 1772
Esp3I CGTCTC 1 cut(s) 350
FaeI CATG 9 cut(s) 395, 856, 1280, 1758, 1782, 2266, 2305, 2634, 2653
FalI AAGNNNNNCTT 4 cut(s) 282, 314, 1602, 1634
FaqI GGGAC 1 cut(s) 2548
FatI CATG 9 cut(s) 391, 852, 1276, 1754, 1778, 2262, 2301, 2630, 2649
FauNDI CATATG 3 cut(s) 717, 1120, 1696
FbaI TGATCA 3 cut(s) 3, 655, 2827
Fnu4HI GCNGC 7 cut(s) 285, 294, 1002, 1635, 1870, 2238, 2856
FokI GGATG 6 cut(s) 466, 788, 986, 1380, 1490, 2803
Fsp4HI GCNGC 7 cut(s) 285, 294, 1002, 1635, 1870, 2238, 2856
FspBI CTAG 7 cut(s) 234, 699, 1044, 1155, 1997, 2895, 2901
GlaI GCGC 3 cut(s) 283, 1582, 2689
GluI GCNGC 7 cut(s) 285, 294, 1002, 1635, 1870, 2238, 2856
GsuI CTGGAG 3 cut(s) 99, 2823, 2823
HaeII RGCGCY 1 cut(s) 1584
HaeIII GGCC 7 cut(s) 89, 194, 1339, 1771, 1872, 2109, 2726
HapII CCGG 9 cut(s) 919, 1173, 1340, 1584, 1707, 1732, 2532, 2732, 2756
HgaI GACGC 1 cut(s) 485
HhaI GCGC 3 cut(s) 284, 1583, 2690
Hin1II CATG 9 cut(s) 395, 856, 1280, 1758, 1782, 2266, 2305, 2634, 2653
Hin6I GCGC 3 cut(s) 282, 1581, 2688
HinP1I GCGC 3 cut(s) 282, 1581, 2688
HincII GTYRAC 2 cut(s) 1149, 2004
HindII GTYRAC 2 cut(s) 1149, 2004
HindIII AAGCTT 1 cut(s) 35
HinfI GANTC 6 cut(s) 702, 1346, 1488, 2615, 2622, 2641
HpaII CCGG 9 cut(s) 919, 1173, 1340, 1584, 1707, 1732, 2532, 2732, 2756
HphI GGTGA 3 cut(s) 1297, 1355, 2721
Hpy166II GTNNAC 6 cut(s) 559, 1149, 1244, 1519, 2004, 2128
Hpy8I GTNNAC 6 cut(s) 559, 1149, 1244, 1519, 2004, 2128
Hpy99I CGWCG 2 cut(s) 566, 2108
HpyCH4IV ACGT 4 cut(s) 321, 2030, 2103, 2865
HpyF3I CTNAG 6 cut(s) 199, 738, 1300, 2087, 2163, 2472
HpySE526I ACGT 4 cut(s) 321, 2030, 2103, 2865
Hsp92II CATG 9 cut(s) 395, 856, 1280, 1758, 1782, 2266, 2305, 2634, 2653
HspAI GCGC 3 cut(s) 282, 1581, 2688
Kpn2I TCCGGA 1 cut(s) 1731
KroI GCCGGC 2 cut(s) 1172, 1583
KroNI GCCGGC 2 cut(s) 1174, 1585
Ksp22I TGATCA 3 cut(s) 3, 655, 2827
LguI GCTCTTC 1 cut(s) 1542
LmnI GCTCC 3 cut(s) 452, 921, 1743
Lsp1109I GCAGC 6 cut(s) 296, 305, 988, 1621, 2224, 2867
LweI GCATC 7 cut(s) 488, 580, 598, 988, 1176, 1621, 2256
MaeI CTAG 7 cut(s) 234, 699, 1044, 1155, 1997, 2895, 2901
MaeII ACGT 4 cut(s) 321, 2030, 2103, 2865
MaeIII GTNAC 8 cut(s) 343, 1447, 1462, 1480, 1589, 1654, 2031, 2872
MfeI CAATTG 2 cut(s) 1023, 1254
MflI RGATCY 3 cut(s) 1456, 1783, 2080
MhlI GDGCHC 1 cut(s) 540
MlsI TGGCCA 1 cut(s) 89
MluNI TGGCCA 1 cut(s) 89
MlyI GAGTC 2 cut(s) 711, 2616
MmeI TCCRAC 3 cut(s) 503, 1406, 1621
Mox20I TGGCCA 1 cut(s) 89
Mph1103I ATGCAT 1 cut(s) 1756
MroI TCCGGA 1 cut(s) 1731
MroNI GCCGGC 2 cut(s) 1172, 1583
MroXI GAANNNNTTC 1 cut(s) 1863
MscI TGGCCA 1 cut(s) 89
MslI CAYNNNNRTG 1 cut(s) 188
Msp20I TGGCCA 1 cut(s) 89
MspA1I CMGCKG 2 cut(s) 2612, 2909
MspI CCGG 9 cut(s) 919, 1173, 1340, 1584, 1707, 1732, 2532, 2732, 2756
MspR9I CCNGG 2 cut(s) 1341, 2533
MunI CAATTG 2 cut(s) 1023, 1254
Mva1269I GAATGC 2 cut(s) 1078, 1756
MvnI CGCG 2 cut(s) 1869, 2688
NaeI GCCGGC 2 cut(s) 1174, 1585
NciI CCSGG 2 cut(s) 1341, 2533
NdeI CATATG 3 cut(s) 717, 1120, 1696
NgoMIV GCCGGC 2 cut(s) 1172, 1583
NlaIII CATG 9 cut(s) 395, 856, 1280, 1758, 1782, 2266, 2305, 2634, 2653
NlaIV GGNNCC 3 cut(s) 1576, 2311, 2516
NmeAIII GCCGAG 1 cut(s) 258
NmuCI GTSAC 5 cut(s) 343, 1462, 1480, 2031, 2872
NsiI ATGCAT 1 cut(s) 1756
PceI AGGCCT 2 cut(s) 1771, 2726
PciSI GCTCTTC 1 cut(s) 1542
PcsI WCGNNNNNNNCGW 2 cut(s) 356, 1246
PctI GAATGC 2 cut(s) 1078, 1756
PdiI GCCGGC 2 cut(s) 1174, 1585
PdmI GAANNNNTTC 1 cut(s) 1863
PfeI GAWTC 4 cut(s) 1346, 1488, 2615, 2641
PflFI GACNNNGTC 1 cut(s) 2867
PflMI CCANNNNNTGG 1 cut(s) 1388
PkrI GCNGC 7 cut(s) 286, 295, 1003, 1636, 1871, 2239, 2857
PleI GAGTC 2 cut(s) 710, 2616
PmaCI CACGTG 1 cut(s) 322
PmlI CACGTG 1 cut(s) 322
PpsI GAGTC 2 cut(s) 710, 2616
Ppu21I YACGTR 1 cut(s) 322
PpuMI RGGWCCY 1 cut(s) 2515
PshBI ATTAAT 2 cut(s) 372, 1854
Psp5II RGGWCCY 1 cut(s) 2515
PspCI CACGTG 1 cut(s) 322
PspN4I GGNNCC 3 cut(s) 1576, 2311, 2516
PspPI GGNCC 8 cut(s) 193, 338, 1124, 1244, 1871, 2309, 2515, 2734
PspPPI RGGWCCY 1 cut(s) 2515
PstI CTGCAG 2 cut(s) 1516, 2857
PstNI CAGNNNCTG 1 cut(s) 2861
PsuI RGATCY 3 cut(s) 1456, 1783, 2080
PsyI GACNNNGTC 1 cut(s) 2867
PvuII CAGCTG 2 cut(s) 2612, 2909
RsaI GTAC 7 cut(s) 17, 260, 560, 1550, 2470, 2890, 2905
RsaNI GTAC 7 cut(s) 16, 259, 559, 1549, 2469, 2889, 2904
RseI CAYNNNNRTG 1 cut(s) 188
SapI GCTCTTC 1 cut(s) 1542
SatI GCNGC 7 cut(s) 285, 294, 1002, 1635, 1870, 2238, 2856
Sau96I GGNCC 8 cut(s) 193, 338, 1124, 1244, 1871, 2309, 2515, 2734
ScaI AGTACT 2 cut(s) 2470, 2890
SchI GAGTC 2 cut(s) 711, 2616
ScrFI CCNGG 2 cut(s) 1341, 2533
SduI GDGCHC 1 cut(s) 540
SfaNI GCATC 7 cut(s) 488, 580, 598, 988, 1176, 1621, 2256
SfcI CTRYAG 2 cut(s) 1512, 2853
SinI GGWCC 6 cut(s) 338, 1124, 1244, 2309, 2515, 2734
SmiMI CAYNNNNRTG 1 cut(s) 188
SmlI CTYRAG 3 cut(s) 1765, 2054, 2464
SmoI CTYRAG 3 cut(s) 1765, 2054, 2464
SpeI ACTAGT 1 cut(s) 1043
SseBI AGGCCT 2 cut(s) 1771, 2726
SsiI CCGC 7 cut(s) 503, 645, 1271, 1637, 1869, 2384, 2708
SspI AATATT 1 cut(s) 2285
SspMI CTAG 7 cut(s) 234, 699, 1044, 1155, 1997, 2895, 2901
StuI AGGCCT 2 cut(s) 1771, 2726
StyD4I CCNGG 2 cut(s) 1339, 2531
StyI CCWWGG 1 cut(s) 1772
TaiI ACGT 4 cut(s) 324, 2033, 2106, 2868
TatI WGTACW 5 cut(s) 258, 1548, 2468, 2888, 2903
TauI GCSGC 1 cut(s) 1872
TfiI GAWTC 4 cut(s) 1346, 1488, 2615, 2641
TscAI CASTG 9 cut(s) 123, 277, 348, 559, 1489, 1521, 1942, 2506, 2866
TseFI GTSAC 5 cut(s) 343, 1462, 1480, 2031, 2872
TseI GCWGC 6 cut(s) 284, 293, 1001, 1634, 2237, 2855
Tsp45I GTSAC 5 cut(s) 343, 1462, 1480, 2031, 2872
TspGWI ACGGA 5 cut(s) 509, 740, 1345, 1490, 2241
TspRI CASTG 9 cut(s) 123, 277, 348, 559, 1489, 1521, 1942, 2506, 2866
Tth111I GACNNNGTC 1 cut(s) 2867
Van91I CCANNNNNTGG 1 cut(s) 1388
VpaK11BI GGWCC 6 cut(s) 338, 1124, 1244, 2309, 2515, 2734
VspI ATTAAT 2 cut(s) 372, 1854
XapI RAATTY 6 cut(s) 832, 908, 1213, 1436, 2480, 2658
XmnI GAANNNNTTC 1 cut(s) 1863
XspI CTAG 7 cut(s) 234, 699, 1044, 1155, 1997, 2895, 2901
ZrmI AGTACT 2 cut(s) 2470, 2890
Zsp2I ATGCAT 1 cut(s) 1756
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.