FvH4_2g37170

Glutamate receptor

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Reverse (-)
27127506 .. 27132226
4721 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g37170.t1

Sequence Viewer

Length: 2655 bp
ATGCAGATGATCAAGAAGATTCACTTCATCTCTCTTTGTTATTATTCTCTCTTCTTGGTCTTCTCCAGTATTGTCGTGGCCGTGGCGGCACAGAATGATCCGGTGAATGTGGGAGTTGGAGTGGTTCTTGATTCCTCTTCTGGGGTTGGGAAGATGGGGTTGAGCTGCATCAACATGTCGCTCACGGACTTCTATGCCTCCCATCCCAATTACACCACCAGGCTGCTTCTGCACCAGAAAAACTCATCACCCGAAGACGTTGTTCTTACTGCGGCTGCAGCTCTGGACCTAATAAATAACGATCAAGTGCAAGCCATCATAGGCCCACAATCTTCAATGCAGGCCAACTTCCTAATAAGCCTCGGAGACAAAGCCCACGTTCCTATAATCTCATTCTCCGCCTCAAGCCCATCTCTCACTTCAATCCGCTCCCCCTACTTCATCCGCGCCGGGCAAAACGACTCGTCGCAGGTCAAAGCCCTAAGCGCCCTAATCCAAGCCTTCGGCTGGCGACAAGTCGTCCCCATCTACGTAGACAACGAGTTCGGCGAGGGAGTCATCCCTTACCTCTCCGATGCTCTACAACAAGTTGACGTCAGAATCCCTTACCGGACCGTACTTCCGTCAAAGGCCTCCGATGAACATATCGAAGCGGAGCTTCTTAAATTGGTGACCATGCAGACAAGGGTCTTTGTTGTTCATATGTTGCCTGAACTTGGTTCTAGGGTTTTCGAGAAGGCTAAGAAGCTTGGGATGATGGAGGAGGGCTATGTTTGGATCATGACAGATGGAATGTCCAACCTTTTTAGCTATATCAGTTCTTCTTCTGTGATGGAAAATATGCAAGGGGTTTTGGGTGTGAAAACTTATGTGCCGAGTACAAATGAGCTCGAGGGTTTTAGGGTTAGGTGGAAGAGGAAGTTCCAGGAAGACAATCCAGGTGTTGATGTGGATTTGGGCGTGTTTGGATTTTGGGCTTACGATGCTGCTACGGCATTGGCTACGGCAGTTGAAGAGGTTGTGAGGAGTAGTAATGGAAGCTTAGGGTTTCAGAAGTCGAATTCTTCCGGTAGTTCTAATGATTTGGAGAGGATTGGTGTGTCGATAATTGGTTCTTTACTAGTGGAAGCATTGTGGAGGACTAATTTCCTAGGGCTTTCGGGGCGTTTTAGCCTCCAAAATGGGCAGCTACAATCATCAACTTTTCAGATTGTTAATGTGATTGGTAGTGGAGAGAAGGTGATCGGGTATTGGACACCCCAAAACGGACTTGTGAGAAGTTTGAATTCCAAAATCACAATGAACAGCTCGTACTCTACTTCGAATACTAGTCTTGGGTCTATTATATGGCCTGGAGACTCCATTTCTGCTCCAAAAGGTTGGCAGATTCCTACGAGTGGGAAGAAGTTGAAGATTTTAGTACCAGTTAAGAGTGGGTTCAAGGAGTTTGTGAATGTGACGTTTGATCCAAAGACCAACACAAGCATGGTCATGGGTGGATACTGCATAGAAGTCTTCAAAGCTGTAAAGGAAGCATTGCCTTATGATATAGAATATGACCTTGTTGCTTTTGCCAAGCCTAATGGTAGCAAGGCTGGTAATTACAATGATTTGGCCAATGAAGTATATCTTGGGAATTATGATGCTGCAGTGGGAGATATAACCATTAGAGCAAACAGGTCCTTGTACATTGATTTTACTTTGCCATTCACAGAATCTGGGGTATCTATGATTGTGCCCATTAAAGATAACAAAAATAAAAATGCATGGGTGTTCTTGAAGCCTTTGACTTGGGACTTATGGGCAACAAGTGGTTGTTTCTTCATATTCATTGGTTTTGTGGTTTGGGTTTTAGAACATCGGATTAACGAAGACTTTCGAGGGCCCCCTCCTCATCAGATTGGCACAAGCTTGTGGTTCTCCTTCTCAACCATGGTTTTTGCACACCGGGAAAGAGTAGTGAGCAACTTGGCTAGGTTTGTAGTGATCATATGGTGTTTCGTCGTCCTCATTTTGACTCAAAGTTACACCGCCAGTTTAACATCACTTTTAACAGTTCAACAGCTCCAACCAACTGTTACTGACGTAAACTGGCTTCTGAAGAATAGAGAGAATGTTGGCTACCAATCAGGTTCTTTTGTTTATGGGATTTTGAAACAGCTAGGGTTTCAGGATGAAAAGCTGAGGACTTTTGATACTGTTGAACAATTGAACGAACTTTTTCATAACGGGACTGCAAATAATGGGATAGCTGCTGCATTCGATGAGACCCCATATATGAAATTGTTTCTTGCAACTTACTGCTCGAAATACACCATGGTTGAGCCAACGTTCAAAGCTGATGGTTTTGCCTTTATCTTCCCGAAAGACTCACCTCTTGCTCGCGATGTTTCAAGGGCAATCTTAAATGTGAATGAGGGAGGTGAAATGCAAAGGATTGAAGATAGGTGGTTCAAAAGACAAGAATGTCAAGACACAACGAACAGTGTCTCATCCAACAGTCTTAGCCTCGAGAGTTTTTGGGGCCTCTTCCTCATTGCCGGCGTCGCTTCATCATTGGCTCTCATCATATTTGTGCCATGTTCTTGTATGAACACAGGCACATTCGCTTGGATTCAGAATCTTCATTTTGGAGAAAAGTTCTTGTCATGTTAA

Protein Analysis

885

Amino Acids

97.95

Weight (kDa)

5.98

Isoelectric Point (pI)

34.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ANF_receptor PF01094 56 - 409 7.2e-82 Receptor family ligand binding region
Peripla_BP_6 PF13458 89 - 339 8.2e-16 Periplasmic binding protein
Lig_chan-Glu_bd PF10613 491 - 580 1.5e-10 Ligated ion channel L-glutamate- and glycine-binding site
SBP_bac_3 PF00497 497 - 819 1.8e-09 Bacterial extracellular solute-binding proteins, family 3
Lig_chan PF00060 597 - 850 4.8e-40 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2466
AatII GACGTC 1 cut(s) 597
Acc36I ACCTGC 1 cut(s) 460
AccBSI CCGCTC 1 cut(s) 429
AccI GTMKAC 1 cut(s) 534
AccII CGCG 2 cut(s) 447, 2385
AciI CCGC 7 cut(s) 86, 272, 399, 427, 445, 653, 2031
AclI AACGTT 1 cut(s) 2330
AclWI GGATC 3 cut(s) 92, 785, 1460
AcoI YGGCCR 2 cut(s) 78, 1614
AcsI RAATTY 2 cut(s) 1060, 1285
AcuI CTGAAG 1 cut(s) 2120
AcyI GRCGYC 2 cut(s) 594, 2544
AfaI GTAC 5 cut(s) 618, 880, 1313, 1422, 1688
AfiI CCNNNNNNNGG 5 cut(s) 141, 507, 716, 1265, 1397
AflIII ACRYGT 1 cut(s) 174
AhdI GACNNNNNGTC 1 cut(s) 518
AhlI ACTAGT 2 cut(s) 1120, 1328
AjnI CCWGG 4 cut(s) 218, 924, 937, 1351
AjuI GAANNNNNNNTTGG 2 cut(s) 1614, 1646
Alw21I GWGCWC 1 cut(s) 891
Alw26I GTCTC 4 cut(s) 360, 1350, 2261, 2494
AlwI GGATC 3 cut(s) 92, 785, 1460
AlwNI CAGNNNCTG 1 cut(s) 1718
Ama87I CYCGRG 2 cut(s) 890, 2510
AoxI GGCC 8 cut(s) 78, 322, 342, 630, 1349, 1614, 1883, 2524
ApaI GGGCCC 1 cut(s) 1887
ApeKI GCWGC 9 cut(s) 165, 223, 275, 278, 986, 1186, 1646, 2252, 2255
ApoI RAATTY 2 cut(s) 1060, 1285
ArsI GACNNNNNNTTYG 2 cut(s) 527, 559
Asp700I GAANNNNTTC 2 cut(s) 1875, 2220
AspA2I CCTAGG 1 cut(s) 1150
AspLEI GCGC 2 cut(s) 449, 488
AspS9I GGNCC 7 cut(s) 286, 323, 612, 1680, 1883, 1884, 2524
AsuC2I CCSGG 2 cut(s) 451, 1949
AsuHPI GGTGA 6 cut(s) 115, 240, 682, 1252, 2364, 2435
AsuII TTCGAA 1 cut(s) 1322
AvaI CYCGRG 2 cut(s) 890, 2510
AvaII GGWCC 3 cut(s) 286, 612, 1680
AvrII CCTAGG 1 cut(s) 1150
BaeGI GKGCMC 2 cut(s) 1740, 1887
BalI TGGCCA 1 cut(s) 1616
BanII GRGCYC 2 cut(s) 891, 1887
BarI GAAGNNNNNNTAC 2 cut(s) 2079, 2111
BbsI GAAGAC 5 cut(s) 52, 261, 936, 1507, 1878
Bbv12I GWGCWC 1 cut(s) 891
BbvCI CCTCAGC 1 cut(s) 2183
BbvI GCAGC 9 cut(s) 152, 210, 262, 290, 973, 1198, 1633, 2239, 2242
BccI CCATC 9 cut(s) 148, 210, 323, 418, 533, 751, 782, 826, 2336
BceAI ACGGC 3 cut(s) 65, 1008, 1020
BciT130I CCWGG 4 cut(s) 220, 926, 939, 1353
BciVI GTATCC 1 cut(s) 1493
BclI TGATCA 2 cut(s) 9, 1986
BcnI CCSGG 2 cut(s) 451, 1949
BcoDI GTCTC 4 cut(s) 360, 1350, 2261, 2494
BcuI ACTAGT 2 cut(s) 1120, 1328
BfaI CTAG 6 cut(s) 723, 1121, 1151, 1329, 1974, 2162
BfmI CTRYAG 2 cut(s) 276, 1647
BfoI RGCGCY 1 cut(s) 489
BfuAI ACCTGC 1 cut(s) 460
BfuI GTATCC 1 cut(s) 1493
BglI GCCNNNNNGGC 1 cut(s) 86
BlnI CCTAGG 1 cut(s) 1150
Bme1390I CCNGG 6 cut(s) 220, 451, 926, 939, 1353, 1949
Bme18I GGWCC 3 cut(s) 286, 612, 1680
BmeRI GACNNNNNGTC 1 cut(s) 518
BmeT110I CYCGRG 2 cut(s) 890, 2510
BmgT120I GGNCC 7 cut(s) 286, 323, 612, 1680, 1883, 1884, 2524
BmiI GGNNCC 3 cut(s) 1885, 1886, 2525
BmrFI CCNGG 6 cut(s) 220, 451, 926, 939, 1353, 1949
BmsI GCATC 4 cut(s) 177, 565, 973, 1633
BoxI GACNNNNGTC 1 cut(s) 686
BpiI GAAGAC 5 cut(s) 52, 261, 936, 1507, 1878
BpmI CTGGAG 2 cut(s) 49, 1374
Bpu10I CCTNAGC 3 cut(s) 482, 1042, 2183
Bpu14I TTCGAA 1 cut(s) 1322
BpuEI CTTGAG 1 cut(s) 388
BpuMI CCSGG 2 cut(s) 451, 1949
BsaAI YACGTR 1 cut(s) 532
BsaHI GRCGYC 2 cut(s) 594, 2544
BsaI GGTCTC 1 cut(s) 2261
BsaJI CCNNGG 5 cut(s) 81, 361, 1150, 1932, 2316
BsaWI WCCGGW 3 cut(s) 100, 609, 1067
BsaXI ACNNNNNCTCC 4 cut(s) 105, 135, 1224, 1254
Bsc4I CCNNNNNNNGG 5 cut(s) 141, 507, 716, 1265, 1397
Bse118I RCCGGY 1 cut(s) 2540
Bse1I ACTGG 4 cut(s) 66, 1424, 2034, 2096
Bse3DI GCAATG 2 cut(s) 1535, 2535
BseBI CCWGG 4 cut(s) 220, 926, 939, 1353
BseDI CCNNGG 5 cut(s) 81, 361, 1150, 1932, 2316
BseGI GGATG 6 cut(s) 202, 441, 558, 759, 2179, 2492
BseLI CCNNNNNNNGG 5 cut(s) 141, 507, 716, 1265, 1397
BseMI GCAATG 2 cut(s) 1535, 2535
BseMII CTCAG 1 cut(s) 2174
BseNI ACTGG 4 cut(s) 66, 1424, 2034, 2096
BseRI GAGGAG 3 cut(s) 776, 1039, 1881
BseSI GKGCMC 2 cut(s) 1740, 1887
BseXI GCAGC 9 cut(s) 152, 210, 262, 290, 973, 1198, 1633, 2239, 2242
BsgI GTGCAG 1 cut(s) 215
Bsh1236I CGCG 2 cut(s) 447, 2385
BshFI GGCC 8 cut(s) 80, 324, 344, 632, 1351, 1616, 1885, 2526
BsiHKAI GWGCWC 1 cut(s) 891
BsiHKCI CYCGRG 2 cut(s) 890, 2510
BsiSI CCGG 6 cut(s) 101, 450, 610, 1068, 1948, 2541
BslFI GGGAC 3 cut(s) 506, 1808, 2245
BslI CCNNNNNNNGG 5 cut(s) 141, 507, 716, 1265, 1397
BsmAI GTCTC 4 cut(s) 360, 1350, 2261, 2494
BsmFI GGGAC 3 cut(s) 506, 1808, 2245
BsmI GAATGC 1 cut(s) 2258
BsnI GGCC 8 cut(s) 80, 324, 344, 632, 1351, 1616, 1885, 2526
Bso31I GGTCTC 1 cut(s) 2261
BsoBI CYCGRG 2 cut(s) 890, 2510
Bsp119I TTCGAA 1 cut(s) 1322
Bsp120I GGGCCC 1 cut(s) 1883
Bsp1286I GDGCHC 3 cut(s) 891, 1740, 1887
Bsp1407I TGTACA 1 cut(s) 1686
Bsp143I GATC 7 cut(s) 9, 97, 301, 777, 1242, 1465, 1986
Bsp19I CCATGG 2 cut(s) 1932, 2316
Bsp68I TCGCGA 1 cut(s) 2385
BspACI CCGC 7 cut(s) 86, 272, 399, 427, 445, 653, 2031
BspANI GGCC 8 cut(s) 80, 324, 344, 632, 1351, 1616, 1885, 2526
BspCNI CTCAG 1 cut(s) 2175
BspFNI CGCG 2 cut(s) 447, 2385
BspHI TCATGA 1 cut(s) 780
BspLI GGNNCC 3 cut(s) 1885, 1886, 2525
BspMAI CTGCAG 2 cut(s) 280, 1651
BspMI ACCTGC 1 cut(s) 460
BspPI GGATC 3 cut(s) 92, 785, 1460
BspT104I TTCGAA 1 cut(s) 1322
BspTNI GGTCTC 1 cut(s) 2261
BsrBI CCGCTC 1 cut(s) 429
BsrDI GCAATG 2 cut(s) 1535, 2535
BsrFI RCCGGY 1 cut(s) 2540
BsrGI TGTACA 1 cut(s) 1686
BsrI ACTGG 4 cut(s) 66, 1424, 2034, 2096
BssAI RCCGGY 1 cut(s) 2540
BssECI CCNNGG 5 cut(s) 81, 361, 1150, 1932, 2316
BssMI GATC 7 cut(s) 9, 97, 301, 777, 1242, 1465, 1986
BssNI GRCGYC 2 cut(s) 594, 2544
BssT1I CCWWGG 3 cut(s) 1150, 1932, 2316
Bst2UI CCWGG 4 cut(s) 220, 926, 939, 1353
Bst4CI ACNGT 6 cut(s) 616, 2056, 2077, 2200, 2486, 2501
Bst6I CTCTTC 5 cut(s) 56, 142, 908, 1008, 2534
BstACI GRCGYC 2 cut(s) 594, 2544
BstAUI TGTACA 1 cut(s) 1686
BstBAI YACGTR 1 cut(s) 532
BstBI TTCGAA 1 cut(s) 1322
BstC8I GCNNGC 5 cut(s) 312, 342, 509, 2383, 2542
BstDEI CTNAG 5 cut(s) 482, 741, 1042, 2183, 2504
BstDSI CCRYGG 3 cut(s) 81, 1932, 2316
BstEII GGTNACC 1 cut(s) 670
BstF5I GGATG 6 cut(s) 202, 441, 558, 759, 2179, 2492
BstFNI CGCG 2 cut(s) 447, 2385
BstH2I RGCGCY 1 cut(s) 489
BstHHI GCGC 2 cut(s) 449, 488
BstKTI GATC 7 cut(s) 12, 100, 304, 780, 1245, 1468, 1989
BstMAI GTCTC 4 cut(s) 360, 1350, 2261, 2494
BstMBI GATC 7 cut(s) 9, 97, 301, 777, 1242, 1465, 1986
BstMWI GCNNNNNNNGC 8 cut(s) 86, 229, 278, 485, 983, 992, 1162, 2546
BstNI CCWGG 4 cut(s) 220, 926, 939, 1353
BstNSI RCATGY 1 cut(s) 178
BstPAI GACNNNNGTC 1 cut(s) 686
BstPI GGTNACC 1 cut(s) 670
BstSCI CCNGG 6 cut(s) 218, 449, 924, 937, 1351, 1947
BstSFI CTRYAG 2 cut(s) 276, 1647
BstSLI GKGCMC 2 cut(s) 1740, 1887
BstSNI TACGTA 1 cut(s) 532
BstUI CGCG 2 cut(s) 447, 2385
BstV1I GCAGC 9 cut(s) 152, 210, 262, 290, 973, 1198, 1633, 2239, 2242
BstV2I GAAGAC 5 cut(s) 52, 261, 936, 1507, 1878
BstXI CCANNNNNNTGG 1 cut(s) 1380
BsuI GTATCC 1 cut(s) 1493
BsuRI GGCC 8 cut(s) 80, 324, 344, 632, 1351, 1616, 1885, 2526
BtgI CCRYGG 3 cut(s) 81, 1932, 2316
BtgZI GCGATG 1 cut(s) 2400
BtsCI GGATG 6 cut(s) 202, 441, 558, 759, 2179, 2492
BtsI GCAGTG 1 cut(s) 1656
BtsIMutI CAGTG 2 cut(s) 1656, 2491
BtuMI TCGCGA 1 cut(s) 2385
BveI ACCTGC 1 cut(s) 460
Cac8I GCNNGC 5 cut(s) 312, 342, 509, 2383, 2542
CaiI CAGNNNCTG 1 cut(s) 1718
CciI TCATGA 1 cut(s) 780
CfoI GCGC 2 cut(s) 449, 488
Cfr10I RCCGGY 1 cut(s) 2540
Cfr13I GGNCC 7 cut(s) 286, 323, 612, 1680, 1883, 1884, 2524
CpoI CGGWCCG 1 cut(s) 612
CseI GACGC 1 cut(s) 2533
Csp6I GTAC 5 cut(s) 617, 879, 1312, 1421, 1687
CspI CGGWCCG 1 cut(s) 612
CviQI GTAC 5 cut(s) 617, 879, 1312, 1421, 1687
DdeI CTNAG 5 cut(s) 482, 741, 1042, 2183, 2504
DpnI GATC 7 cut(s) 11, 99, 303, 779, 1244, 1467, 1988
DpnII GATC 7 cut(s) 9, 97, 301, 777, 1242, 1465, 1986
DrdI GACNNNNNNGTC 1 cut(s) 2466
DriI GACNNNNNGTC 1 cut(s) 518
DseDI GACNNNNNNGTC 1 cut(s) 2466
EaeI YGGCCR 2 cut(s) 78, 1614
Eam1104I CTCTTC 5 cut(s) 56, 142, 908, 1008, 2534
Eam1105I GACNNNNNGTC 1 cut(s) 518
EarI CTCTTC 5 cut(s) 56, 142, 908, 1008, 2534
EciI GGCGGA 1 cut(s) 388
Ecl136II GAGCTC 1 cut(s) 889
Eco105I TACGTA 1 cut(s) 532
Eco130I CCWWGG 3 cut(s) 1150, 1932, 2316
Eco147I AGGCCT 1 cut(s) 632
Eco24I GRGCYC 2 cut(s) 891, 1887
Eco31I GGTCTC 1 cut(s) 2261
Eco47I GGWCC 3 cut(s) 286, 612, 1680
Eco53kI GAGCTC 1 cut(s) 889
Eco57I CTGAAG 1 cut(s) 2120
Eco88I CYCGRG 2 cut(s) 890, 2510
Eco91I GGTNACC 1 cut(s) 670
EcoICRI GAGCTC 1 cut(s) 889
EcoO109I RGGNCCY 4 cut(s) 1680, 1883, 1884, 2524
EcoO65I GGTNACC 1 cut(s) 670
EcoRI GAATTC 2 cut(s) 1060, 1285
EcoRII CCWGG 4 cut(s) 218, 924, 937, 1351
EcoT14I CCWWGG 3 cut(s) 1150, 1932, 2316
EcoT22I ATGCAT 1 cut(s) 1768
EcoT38I GRGCYC 2 cut(s) 891, 1887
ErhI CCWWGG 3 cut(s) 1150, 1932, 2316
FalI AAGNNNNNCTT 6 cut(s) 8, 40, 642, 674, 1614, 1646
FaqI GGGAC 3 cut(s) 506, 1808, 2245
FauNDI CATATG 2 cut(s) 702, 1991
FbaI TGATCA 2 cut(s) 9, 1986
FblI GTMKAC 1 cut(s) 534
FokI GGATG 6 cut(s) 189, 428, 545, 766, 2186, 2479
FriOI GRGCYC 2 cut(s) 891, 1887
FspBI CTAG 6 cut(s) 723, 1121, 1151, 1329, 1974, 2162
GlaI GCGC 2 cut(s) 448, 487
GsuI CTGGAG 2 cut(s) 49, 1374
HaeII RGCGCY 1 cut(s) 489
HaeIII GGCC 8 cut(s) 80, 324, 344, 632, 1351, 1616, 1885, 2526
HapII CCGG 6 cut(s) 101, 450, 610, 1068, 1948, 2541
HgaI GACGC 1 cut(s) 2533
HhaI GCGC 2 cut(s) 449, 488
Hin1I GRCGYC 2 cut(s) 594, 2544
Hin6I GCGC 2 cut(s) 447, 486
HinP1I GCGC 2 cut(s) 447, 486
HincII GTYRAC 1 cut(s) 592
HindII GTYRAC 1 cut(s) 592
HindIII AAGCTT 3 cut(s) 746, 1039, 1909
HpaII CCGG 6 cut(s) 101, 450, 610, 1068, 1948, 2541
HphI GGTGA 6 cut(s) 115, 240, 682, 1252, 2364, 2435
Hpy166II GTNNAC 3 cut(s) 535, 592, 2089
Hpy8I GTNNAC 3 cut(s) 535, 592, 2089
Hpy99I CGWCG 3 cut(s) 469, 2006, 2549
HpyAV CCTTC 4 cut(s) 511, 730, 1231, 1933
HpyCH4III ACNGT 6 cut(s) 616, 2056, 2077, 2200, 2486, 2501
HpyCH4IV ACGT 7 cut(s) 258, 378, 531, 594, 1460, 2085, 2330
HpyF10VI GCNNNNNNNGC 8 cut(s) 86, 229, 278, 485, 983, 992, 1162, 2546
HpyF3I CTNAG 5 cut(s) 482, 741, 1042, 2183, 2504
HpySE526I ACGT 7 cut(s) 258, 378, 531, 594, 1460, 2085, 2330
Hsp92I GRCGYC 2 cut(s) 594, 2544
HspAI GCGC 2 cut(s) 447, 486
KroI GCCGGC 1 cut(s) 2540
KroNI GCCGGC 1 cut(s) 2542
Ksp22I TGATCA 2 cut(s) 9, 1986
Kzo9I GATC 7 cut(s) 9, 97, 301, 777, 1242, 1465, 1986
LmnI GCTCC 4 cut(s) 434, 655, 1375, 2070
Lsp1109I GCAGC 9 cut(s) 152, 210, 262, 290, 973, 1198, 1633, 2239, 2242
LweI GCATC 4 cut(s) 177, 565, 973, 1633
MaeI CTAG 6 cut(s) 723, 1121, 1151, 1329, 1974, 2162
MaeII ACGT 7 cut(s) 258, 378, 531, 594, 1460, 2085, 2330
MaeIII GTNAC 4 cut(s) 670, 1456, 2024, 2077
MalI GATC 7 cut(s) 11, 99, 303, 779, 1244, 1467, 1988
MbiI CCGCTC 1 cut(s) 429
MboI GATC 7 cut(s) 9, 97, 301, 777, 1242, 1465, 1986
MfeI CAATTG 1 cut(s) 2207
MhlI GDGCHC 3 cut(s) 891, 1740, 1887
MlsI TGGCCA 1 cut(s) 1616
MluNI TGGCCA 1 cut(s) 1616
MlyI GAGTC 5 cut(s) 455, 564, 1352, 2011, 2363
MmeI TCCRAC 4 cut(s) 97, 822, 2092, 2520
Mox20I TGGCCA 1 cut(s) 1616
Mph1103I ATGCAT 1 cut(s) 1768
MroNI GCCGGC 1 cut(s) 2540
MroXI GAANNNNTTC 2 cut(s) 1875, 2220
MscI TGGCCA 1 cut(s) 1616
MseI TTAA 9 cut(s) 663, 1215, 1428, 1743, 1866, 2039, 2051, 2405, 2653
MslI CAYNNNNRTG 4 cut(s) 173, 1484, 1490, 2573
Msp20I TGGCCA 1 cut(s) 1616
MspI CCGG 6 cut(s) 101, 450, 610, 1068, 1948, 2541
MspR9I CCNGG 6 cut(s) 220, 451, 926, 939, 1353, 1949
MunI CAATTG 1 cut(s) 2207
Mva1269I GAATGC 1 cut(s) 2258
MvaI CCWGG 4 cut(s) 220, 926, 939, 1353
MvnI CGCG 2 cut(s) 447, 2385
MwoI GCNNNNNNNGC 8 cut(s) 86, 229, 278, 485, 983, 992, 1162, 2546
NaeI GCCGGC 1 cut(s) 2542
NciI CCSGG 2 cut(s) 451, 1949
NcoI CCATGG 2 cut(s) 1932, 2316
NdeI CATATG 2 cut(s) 702, 1991
NdeII GATC 7 cut(s) 9, 97, 301, 777, 1242, 1465, 1986
NgoMIV GCCGGC 1 cut(s) 2540
NlaIV GGNNCC 3 cut(s) 1885, 1886, 2525
NmeAIII GCCGAG 1 cut(s) 900
NmuCI GTSAC 2 cut(s) 670, 1456
NruI TCGCGA 1 cut(s) 2385
NsiI ATGCAT 1 cut(s) 1768
NspI RCATGY 1 cut(s) 178
NspV TTCGAA 1 cut(s) 1322
PaeR7I CTCGAG 2 cut(s) 890, 2510
PagI TCATGA 1 cut(s) 780
PceI AGGCCT 1 cut(s) 632
PciI ACATGT 1 cut(s) 174
PcsI WCGNNNNNNNCGW 2 cut(s) 537, 546
PctI GAATGC 1 cut(s) 2258
PdiI GCCGGC 1 cut(s) 2542
PdmI GAANNNNTTC 2 cut(s) 1875, 2220
PfeI GAWTC 7 cut(s) 19, 131, 600, 1387, 1715, 2614, 2620
PfoI TCCNGGA 1 cut(s) 924
PleI GAGTC 5 cut(s) 455, 563, 1352, 2011, 2363
PpsI GAGTC 5 cut(s) 455, 563, 1352, 2011, 2363
Ppu21I YACGTR 1 cut(s) 532
PpuMI RGGWCCY 1 cut(s) 1680
PscI ACATGT 1 cut(s) 174
PshAI GACNNNNGTC 1 cut(s) 686
Psp124BI GAGCTC 1 cut(s) 891
Psp1406I AACGTT 1 cut(s) 2330
Psp5II RGGWCCY 1 cut(s) 1680
Psp6I CCWGG 4 cut(s) 218, 924, 937, 1351
PspEI GGTNACC 1 cut(s) 670
PspGI CCWGG 4 cut(s) 218, 924, 937, 1351
PspN4I GGNNCC 3 cut(s) 1885, 1886, 2525
PspOMI GGGCCC 1 cut(s) 1883
PspPI GGNCC 7 cut(s) 286, 323, 612, 1680, 1883, 1884, 2524
PspPPI RGGWCCY 1 cut(s) 1680
PspXI VCTCGAGB 1 cut(s) 890
PsrI GAACNNNNNNTAC 2 cut(s) 1295, 1327
PstI CTGCAG 2 cut(s) 280, 1651
PstNI CAGNNNCTG 1 cut(s) 1718
RruI TCGCGA 1 cut(s) 2385
RsaI GTAC 5 cut(s) 618, 880, 1313, 1422, 1688
RsaNI GTAC 5 cut(s) 617, 879, 1312, 1421, 1687
RseI CAYNNNNRTG 4 cut(s) 173, 1484, 1490, 2573
Rsr2I CGGWCCG 1 cut(s) 612
RsrII CGGWCCG 1 cut(s) 612
SacI GAGCTC 1 cut(s) 891
SaqAI TTAA 9 cut(s) 663, 1215, 1428, 1743, 1866, 2039, 2051, 2405, 2653
Sau3AI GATC 7 cut(s) 9, 97, 301, 777, 1242, 1465, 1986
Sau96I GGNCC 7 cut(s) 286, 323, 612, 1680, 1883, 1884, 2524
SchI GAGTC 5 cut(s) 455, 564, 1352, 2011, 2363
ScrFI CCNGG 6 cut(s) 220, 451, 926, 939, 1353, 1949
SduI GDGCHC 3 cut(s) 891, 1740, 1887
SfaNI GCATC 4 cut(s) 177, 565, 973, 1633
SfcI CTRYAG 2 cut(s) 276, 1647
Sfr274I CTCGAG 2 cut(s) 890, 2510
SfuI TTCGAA 1 cut(s) 1322
SinI GGWCC 3 cut(s) 286, 612, 1680
SlaI CTCGAG 2 cut(s) 890, 2510
SmiMI CAYNNNNRTG 4 cut(s) 173, 1484, 1490, 2573
SmlI CTYRAG 3 cut(s) 403, 890, 2510
SmoI CTYRAG 3 cut(s) 403, 890, 2510
SnaBI TACGTA 1 cut(s) 532
SpeI ACTAGT 2 cut(s) 1120, 1328
SseBI AGGCCT 1 cut(s) 632
SsiI CCGC 7 cut(s) 86, 272, 399, 427, 445, 653, 2031
SspMI CTAG 6 cut(s) 723, 1121, 1151, 1329, 1974, 2162
SstI GAGCTC 1 cut(s) 891
StuI AGGCCT 1 cut(s) 632
StyD4I CCNGG 6 cut(s) 218, 449, 924, 937, 1351, 1947
StyI CCWWGG 3 cut(s) 1150, 1932, 2316
TaaI ACNGT 6 cut(s) 616, 2056, 2077, 2200, 2486, 2501
TaiI ACGT 7 cut(s) 261, 381, 534, 597, 1463, 2088, 2333
TatI WGTACW 2 cut(s) 878, 1686
TauI GCSGC 2 cut(s) 89, 275
TfiI GAWTC 7 cut(s) 19, 131, 600, 1387, 1715, 2614, 2620
Tru1I TTAA 9 cut(s) 663, 1215, 1428, 1743, 1866, 2039, 2051, 2405, 2653
Tru9I TTAA 9 cut(s) 663, 1215, 1428, 1743, 1866, 2039, 2051, 2405, 2653
TscAI CASTG 2 cut(s) 1656, 2491
TseFI GTSAC 2 cut(s) 670, 1456
TseI GCWGC 9 cut(s) 165, 223, 275, 278, 986, 1186, 1646, 2252, 2255
Tsp45I GTSAC 2 cut(s) 670, 1456
TspGWI ACGGA 3 cut(s) 200, 612, 1281
TspRI CASTG 2 cut(s) 1656, 2491
VpaK11BI GGWCC 3 cut(s) 286, 612, 1680
XapI RAATTY 2 cut(s) 1060, 1285
XceI RCATGY 1 cut(s) 178
XcmI CCANNNNNNNNNTGG 2 cut(s) 73, 1483
XhoI CTCGAG 2 cut(s) 890, 2510
XmaJI CCTAGG 1 cut(s) 1150
XmiI GTMKAC 1 cut(s) 534
XmnI GAANNNNTTC 2 cut(s) 1875, 2220
XspI CTAG 6 cut(s) 723, 1121, 1151, 1329, 1974, 2162
ZraI GACGTC 1 cut(s) 595
Zsp2I ATGCAT 1 cut(s) 1768
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.