Rh6BG457200

Glutamate receptor

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
Physical Location & Seq
Reverse (-)
66908798 .. 66913851
5054 bp
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UTR
Exon/CDS
Intron
Rh6BG457200.1

Sequence Viewer

Length: 2388 bp
ATGATGAAGATGATCAAGAATATTCATATCATCTCTCTTTCTTATTCTCTCTTTTTAGTCTTCTCTAGTATTTTCGCGGCCGTGGCGGCACAGAATAATCCGGTGAATGTGGGAGTCGGGGTGGTTCTTGATTTCGATACGGGGTTTGGGAAGATGGGGCTGAGCTGCATCAACATGTCTCTCTCTGACTTCTATGCCTCTCATCCCAATTACACCACCAGGCTGCTTCTGCACCAGAGGAACTCACCCACAGACGTTGTTCTTACAGCTGCTGCAGCTCTGGACCTAATAAATAATGTTGAAGTGCAAGCCATCATAGGCCCAGAATCTTCAATGCAGGCCAACTTCGTTATAAGCCTCGGAAACAAATCCCATGTCCCTATAATCTCATTTTCCGCCACAAGCCCATCTCTCACTTCAATCCGCTCCCCGTACTTCATCCGCGCCGCTCAAAACGACTCGTCGCAGGTCAAAGCCATAAGTGCCCTAATCCAAGCTTTCGGTTGGCGACAAGTCGTCCCCATCTACGTAGACAACGAGTTCGGCGAGGGGGTCATCCCCTACCTCTCCGATGCTCTACAACAAGTCGACGTCCGAATCCCTTACCGGGCCGTACTTTCGTCAAGGGCCGACGATGACCAAATCGAAATGGAGCTTTTGAAATTGATGGCCATGCAGACAAGGGTCTTCATCGTCCACATGTTGCCTGAACTTGGTACTAGGGTTTTCGAGAGGGCTAAGGAGATTGGGATGATGGATGAAGGTTATGTTTGGATAATGACTGATGGAATGTTCAACATGTTTAGCTATATTAGTTCCGCTTCCGTGGTGGAAAATATGCAAGGGGTTTTGGGTTTGAAACCTTATGTGCCAAGTACAAATGAGCTCGAGGATTTTAGGGTTAGGTGGAAGAGGAAGTTCCAGCAAGACAATCCAGGGGTTGATGATGTGGATTTGGGTGTGTTTGGACTTTGGGCTCATGATGCTCCCAAGGCATTGGCCATGGCAGTTGAGGAGGTTGTGACGAGTAGTAATGAAAGCTTCGGCTTTCAGAAGGTGAATTCTTCTGGTAGTTCTAATGATTTGGAGAGGATTGGAGTGTCGGAAATTGGTCTTCGACTAGTGGAAGCACTGTCAAGGACTAATTTCATTGGGCTTTCAGGGCGTTTTAGCCTCCTAAATGGGCAGCTACAATCATCAACTCTTCAGATTGTTAATGTGATTGGTAAAGGAGAGAAGGTGATAGGGTATTGGACACCCGAAAATGGACTTGTGAGAAGCTTGAATTCCAAAACCACTGTGAACAGCTCATACTCTACCTCGAATACTAGTCTTGGGTCTATTATATGGCCTGGAGACTCCATCTCTGCCCCAAAAGGTTGGCAGATTCCTACAAGTGGGACGAAGTTGAAGATTTTAGTTCCAATTAAGAGTGGGTTCAAGGAGTTTGTGAATGTCACACATGATTCGAGCAGCAACACAAGCAAGGTGGGTGGATACTGCATAGATGTCTTCGAAGCTGTAAAAAAGGCATTACCTTATGATATAGAGTATGAGTATTACCCTTTTGCAATGCCTGATGGTGTGAGTCGTGCTGGTAATTACAATGATTTGGTCAATGAAGTGTTTCTTGGGAAATATGATGCTGCTGTGGGAGATCTAACCATTCGAGCAAACCGGTCCTTGTATATTGATTTTACATTACCATTCACAGAATCTGGGGTATCCATGATTGTGCCCATAAAAGATAACAAAAATAAAAATGCATGGGTGTTCTTGAAGCCTTTGACTTGGGACCTTTGGGTAACAAGTGGTTGTTTTTTCATATTCATTGGTTTTGTGGTATGGGTTCTAGAACATCGGATTAACGAAGACTTCCGAGGGCCTCCACTTCACCAGATTGGCACAAGCTTTTGGTTCTCCTTCTCAACCATGGTTTTCGCACACAGGGAAAGAGTAGTGAGCAACTTGGCTAGGTTTGTAGTGATCATATGGTGTTTCGTCGTCCTCATATTGACTCAAAGTTACACCGCCAGTTTAACATCACTATTAACAGTTCAACAGCTCCAACCAACTGTTACTGACGTAAACTTGCTTCTGAAGAATGGGGACAATGTTGGCTACCAATCAGGTTCGTTTGTTTATGGGATTTTGAAACAGCTAGGATTTCAGGATAATAAGCTCAGGACCTATGATACTGTTGAACAATTAAACGAACTTTTTCATAATGGGACTGCAAATAATGGGATAGCGGCTGCATTTGACGAGACCCCCTATATGAAATTGTTTCTTGCAACTTATTGCTCGAAATACACCATGGTTGAGCCAACGTTCAAAGCTGATGGTTTTGCCTTTGTAAGTAATTTACTTATTTTCTCGCCTATGTGA

Protein Analysis

795

Amino Acids

88.26

Weight (kDa)

5.6

Isoelectric Point (pI)

31.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peripla_BP_6 PF13458 45 - 319 7e-14 Periplasmic binding protein
ANF_receptor PF01094 56 - 409 3.5e-81 Receptor family ligand binding region
Lig_chan-Glu_bd PF10613 483 - 580 1.8e-13 Ligated ion channel L-glutamate- and glycine-binding site
Lig_chan PF00060 597 - 702 2.7e-32 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 353
AatII GACGTC 1 cut(s) 594
Acc36I ACCTGC 1 cut(s) 457
AccBSI CCGCTC 2 cut(s) 426, 449
AccI GTMKAC 2 cut(s) 531, 588
AccII CGCG 2 cut(s) 77, 444
AciI CCGC 9 cut(s) 77, 86, 396, 424, 442, 447, 819, 2031, 2252
AclI AACGTT 1 cut(s) 2330
AcoI YGGCCR 3 cut(s) 78, 669, 999
AcsI RAATTY 2 cut(s) 1060, 1285
AcuI CTGAAG 2 cut(s) 1190, 2120
AcyI GRCGYC 1 cut(s) 591
AfaI GTAC 4 cut(s) 434, 615, 718, 877
AfiI CCNNNNNNNGG 4 cut(s) 607, 713, 1265, 1397
AflIII ACRYGT 3 cut(s) 174, 699, 798
AgeI ACCGGT 1 cut(s) 1677
AhdI GACNNNNNGTC 1 cut(s) 515
AhlI ACTAGT 2 cut(s) 1120, 1328
AjnI CCWGG 3 cut(s) 218, 934, 1351
AjuI GAANNNNNNNTTGG 2 cut(s) 1614, 1646
Alw21I GWGCWC 1 cut(s) 888
Alw26I GTCTC 3 cut(s) 183, 1350, 2261
AlwNI CAGNNNCTG 2 cut(s) 272, 1718
Ama87I CYCGRG 1 cut(s) 887
AoxI GGCC 9 cut(s) 78, 319, 339, 609, 627, 669, 999, 1349, 1883
ApeKI GCWGC 9 cut(s) 165, 223, 269, 272, 275, 1186, 1473, 1646, 2255
ApoI RAATTY 2 cut(s) 1060, 1285
ArsI GACNNNNNNTTYG 4 cut(s) 360, 392, 524, 556
AsiGI ACCGGT 1 cut(s) 1677
Asp700I GAANNNNTTC 2 cut(s) 1626, 2220
AspLEI GCGC 1 cut(s) 446
AspS9I GGNCC 8 cut(s) 283, 320, 609, 627, 1680, 1795, 1883, 2187
AsuC2I CCSGG 1 cut(s) 608
AsuHPI GGTGA 5 cut(s) 115, 237, 1069, 1252, 1886
AsuII TTCGAA 1 cut(s) 1515
AvaI CYCGRG 1 cut(s) 887
AvaII GGWCC 4 cut(s) 283, 1680, 1795, 2187
BaeGI GKGCMC 2 cut(s) 487, 1740
BaeI ACNNNNGTAYC 2 cut(s) 708, 741
BalI TGGCCA 2 cut(s) 671, 1001
BanII GRGCYC 2 cut(s) 888, 979
BarI GAAGNNNNNNTAC 2 cut(s) 2079, 2111
BbsI GAAGAC 5 cut(s) 52, 679, 1106, 1504, 1878
Bbv12I GWGCWC 1 cut(s) 888
BbvI GCAGC 9 cut(s) 152, 210, 256, 259, 287, 1198, 1485, 1633, 2242
BceAI ACGGC 2 cut(s) 65, 596
BciT130I CCWGG 3 cut(s) 220, 936, 1353
BciVI GTATCC 2 cut(s) 1490, 1735
BclI TGATCA 2 cut(s) 12, 1986
BcnI CCSGG 1 cut(s) 608
BcoDI GTCTC 3 cut(s) 183, 1350, 2261
BcuI ACTAGT 2 cut(s) 1120, 1328
BfaI CTAG 7 cut(s) 66, 720, 1121, 1329, 1853, 1974, 2162
BfmI CTRYAG 1 cut(s) 273
BfuAI ACCTGC 1 cut(s) 457
BfuI GTATCC 2 cut(s) 1490, 1735
BglI GCCNNNNNGGC 1 cut(s) 86
BglII AGATCT 1 cut(s) 1657
BlpI GCTNAGC 1 cut(s) 161
Bme1390I CCNGG 4 cut(s) 220, 608, 936, 1353
Bme18I GGWCC 4 cut(s) 283, 1680, 1795, 2187
BmeRI GACNNNNNGTC 1 cut(s) 515
BmeT110I CYCGRG 1 cut(s) 887
BmgT120I GGNCC 8 cut(s) 283, 320, 609, 627, 1680, 1795, 1883, 2187
BmiI GGNNCC 1 cut(s) 1796
BmrFI CCNGG 4 cut(s) 220, 608, 936, 1353
BmsI GCATC 4 cut(s) 177, 562, 973, 1633
BoxI GACNNNNGTC 1 cut(s) 683
BpiI GAAGAC 5 cut(s) 52, 679, 1106, 1504, 1878
BpmI CTGGAG 1 cut(s) 1374
Bpu10I CCTNAGC 2 cut(s) 738, 2183
Bpu1102I GCTNAGC 1 cut(s) 161
Bpu14I TTCGAA 1 cut(s) 1515
BpuMI CCSGG 1 cut(s) 608
BsaAI YACGTR 1 cut(s) 529
BsaHI GRCGYC 1 cut(s) 591
BsaI GGTCTC 1 cut(s) 2261
BsaJI CCNNGG 9 cut(s) 81, 358, 825, 935, 990, 1002, 1879, 1932, 2316
BsaWI WCCGGW 2 cut(s) 100, 1677
BsaXI ACNNNNNCTCC 4 cut(s) 105, 135, 1224, 1254
Bsc4I CCNNNNNNNGG 4 cut(s) 607, 713, 1265, 1397
Bse118I RCCGGY 1 cut(s) 1677
Bse1I ACTGG 1 cut(s) 2034
Bse3DI GCAATG 1 cut(s) 1578
BseBI CCWGG 3 cut(s) 220, 936, 1353
BseDI CCNNGG 9 cut(s) 81, 358, 825, 935, 990, 1002, 1879, 1932, 2316
BseGI GGATG 5 cut(s) 202, 438, 555, 756, 763
BseLI CCNNNNNNNGG 4 cut(s) 607, 713, 1265, 1397
BseMI GCAATG 1 cut(s) 1578
BseMII CTCAG 2 cut(s) 152, 2197
BseNI ACTGG 1 cut(s) 2034
BseRI GAGGAG 1 cut(s) 1028
BseSI GKGCMC 2 cut(s) 487, 1740
BseX3I CGGCCG 1 cut(s) 78
BseXI GCAGC 9 cut(s) 152, 210, 256, 259, 287, 1198, 1485, 1633, 2242
BsgI GTGCAG 1 cut(s) 215
Bsh1236I CGCG 2 cut(s) 77, 444
Bsh1285I CGRYCG 1 cut(s) 81
BshFI GGCC 9 cut(s) 80, 321, 341, 611, 629, 671, 1001, 1351, 1885
BshTI ACCGGT 1 cut(s) 1677
BsiEI CGRYCG 1 cut(s) 81
BsiHKAI GWGCWC 1 cut(s) 888
BsiHKCI CYCGRG 1 cut(s) 887
BsiSI CCGG 3 cut(s) 101, 607, 1678
BslFI GGGAC 6 cut(s) 362, 503, 1414, 1808, 2123, 2245
BslI CCNNNNNNNGG 4 cut(s) 607, 713, 1265, 1397
BsmAI GTCTC 3 cut(s) 183, 1350, 2261
BsmFI GGGAC 6 cut(s) 362, 503, 1414, 1808, 2123, 2245
BsnI GGCC 9 cut(s) 80, 321, 341, 611, 629, 671, 1001, 1351, 1885
Bso31I GGTCTC 1 cut(s) 2261
BsoBI CYCGRG 1 cut(s) 887
Bsp119I TTCGAA 1 cut(s) 1515
Bsp1286I GDGCHC 4 cut(s) 487, 888, 979, 1740
Bsp143I GATC 3 cut(s) 12, 1657, 1986
Bsp1720I GCTNAGC 1 cut(s) 161
Bsp19I CCATGG 3 cut(s) 1002, 1932, 2316
BspACI CCGC 9 cut(s) 77, 86, 396, 424, 442, 447, 819, 2031, 2252
BspANI GGCC 9 cut(s) 80, 321, 341, 611, 629, 671, 1001, 1351, 1885
BspCNI CTCAG 2 cut(s) 153, 2196
BspFNI CGCG 2 cut(s) 77, 444
BspHI TCATGA 1 cut(s) 979
BspLI GGNNCC 1 cut(s) 1796
BspMAI CTGCAG 1 cut(s) 277
BspMI ACCTGC 1 cut(s) 457
BspT104I TTCGAA 1 cut(s) 1515
BspTNI GGTCTC 1 cut(s) 2261
BsrBI CCGCTC 2 cut(s) 426, 449
BsrDI GCAATG 1 cut(s) 1578
BsrFI RCCGGY 1 cut(s) 1677
BsrI ACTGG 1 cut(s) 2034
BssAI RCCGGY 1 cut(s) 1677
BssECI CCNNGG 9 cut(s) 81, 358, 825, 935, 990, 1002, 1879, 1932, 2316
BssMI GATC 3 cut(s) 12, 1657, 1986
BssNI GRCGYC 1 cut(s) 591
BssT1I CCWWGG 4 cut(s) 990, 1002, 1932, 2316
Bst2UI CCWGG 3 cut(s) 220, 936, 1353
Bst4CI ACNGT 5 cut(s) 1134, 1300, 2056, 2077, 2200
Bst6I CTCTTC 2 cut(s) 905, 1209
BstACI GRCGYC 1 cut(s) 591
BstBAI YACGTR 1 cut(s) 529
BstBI TTCGAA 1 cut(s) 1515
BstC8I GCNNGC 2 cut(s) 309, 339
BstDEI CTNAG 3 cut(s) 161, 738, 2183
BstDSI CCRYGG 5 cut(s) 81, 825, 1002, 1932, 2316
BstF5I GGATG 5 cut(s) 202, 438, 555, 756, 763
BstFNI CGCG 2 cut(s) 77, 444
BstHHI GCGC 1 cut(s) 446
BstKTI GATC 3 cut(s) 15, 1660, 1989
BstMAI GTCTC 3 cut(s) 183, 1350, 2261
BstMBI GATC 3 cut(s) 12, 1657, 1986
BstMCI CGRYCG 1 cut(s) 81
BstMWI GCNNNNNNNGC 9 cut(s) 83, 86, 229, 275, 482, 983, 992, 1162, 1482
BstNI CCWGG 3 cut(s) 220, 936, 1353
BstNSI RCATGY 3 cut(s) 178, 703, 802
BstPAI GACNNNNGTC 1 cut(s) 683
BstSCI CCNGG 4 cut(s) 218, 606, 934, 1351
BstSFI CTRYAG 1 cut(s) 273
BstSLI GKGCMC 2 cut(s) 487, 1740
BstSNI TACGTA 1 cut(s) 529
BstUI CGCG 2 cut(s) 77, 444
BstV1I GCAGC 9 cut(s) 152, 210, 256, 259, 287, 1198, 1485, 1633, 2242
BstV2I GAAGAC 5 cut(s) 52, 679, 1106, 1504, 1878
BstX2I RGATCY 1 cut(s) 1657
BstXI CCANNNNNNTGG 2 cut(s) 997, 1380
BstYI RGATCY 1 cut(s) 1657
BstZI CGGCCG 1 cut(s) 78
BsuI GTATCC 2 cut(s) 1490, 1735
BsuRI GGCC 9 cut(s) 80, 321, 341, 611, 629, 671, 1001, 1351, 1885
BtgI CCRYGG 5 cut(s) 81, 825, 1002, 1932, 2316
BtsCI GGATG 5 cut(s) 202, 438, 555, 756, 763
BtsIMutI CAGTG 2 cut(s) 1130, 1296
BveI ACCTGC 1 cut(s) 457
Cac8I GCNNGC 2 cut(s) 309, 339
CaiI CAGNNNCTG 2 cut(s) 272, 1718
CciI TCATGA 1 cut(s) 979
CfoI GCGC 1 cut(s) 446
Cfr10I RCCGGY 1 cut(s) 1677
Cfr13I GGNCC 8 cut(s) 283, 320, 609, 627, 1680, 1795, 1883, 2187
Csp6I GTAC 4 cut(s) 433, 614, 717, 876
CspAI ACCGGT 1 cut(s) 1677
CspCI CAANNNNNGTGG 6 cut(s) 238, 273, 1470, 1474, 1505, 1509
CviQI GTAC 4 cut(s) 433, 614, 717, 876
DdeI CTNAG 3 cut(s) 161, 738, 2183
DpnI GATC 3 cut(s) 14, 1659, 1988
DpnII GATC 3 cut(s) 12, 1657, 1986
DriI GACNNNNNGTC 1 cut(s) 515
EaeI YGGCCR 3 cut(s) 78, 669, 999
EagI CGGCCG 1 cut(s) 78
Eam1104I CTCTTC 2 cut(s) 905, 1209
Eam1105I GACNNNNNGTC 1 cut(s) 515
EarI CTCTTC 2 cut(s) 905, 1209
EciI GGCGGA 1 cut(s) 385
Ecl136II GAGCTC 1 cut(s) 886
EclXI CGGCCG 1 cut(s) 78
Eco105I TACGTA 1 cut(s) 529
Eco130I CCWWGG 4 cut(s) 990, 1002, 1932, 2316
Eco24I GRGCYC 2 cut(s) 888, 979
Eco31I GGTCTC 1 cut(s) 2261
Eco47I GGWCC 4 cut(s) 283, 1680, 1795, 2187
Eco52I CGGCCG 1 cut(s) 78
Eco53kI GAGCTC 1 cut(s) 886
Eco57I CTGAAG 2 cut(s) 1190, 2120
Eco88I CYCGRG 1 cut(s) 887
EcoICRI GAGCTC 1 cut(s) 886
EcoO109I RGGNCCY 3 cut(s) 1795, 1883, 2187
EcoRI GAATTC 2 cut(s) 1060, 1285
EcoRII CCWGG 3 cut(s) 218, 934, 1351
EcoT14I CCWWGG 4 cut(s) 990, 1002, 1932, 2316
EcoT22I ATGCAT 1 cut(s) 1768
EcoT38I GRGCYC 2 cut(s) 888, 979
ErhI CCWWGG 4 cut(s) 990, 1002, 1932, 2316
FalI AAGNNNNNCTT 2 cut(s) 1614, 1646
FaqI GGGAC 6 cut(s) 362, 503, 1414, 1808, 2123, 2245
FauNDI CATATG 1 cut(s) 1991
FbaI TGATCA 2 cut(s) 12, 1986
FblI GTMKAC 2 cut(s) 531, 588
FokI GGATG 5 cut(s) 189, 425, 542, 763, 770
FriOI GRGCYC 2 cut(s) 888, 979
FspBI CTAG 7 cut(s) 66, 720, 1121, 1329, 1853, 1974, 2162
GlaI GCGC 1 cut(s) 445
GsuI CTGGAG 1 cut(s) 1374
HaeIII GGCC 9 cut(s) 80, 321, 341, 611, 629, 671, 1001, 1351, 1885
HapII CCGG 3 cut(s) 101, 607, 1678
HhaI GCGC 1 cut(s) 446
Hin1I GRCGYC 1 cut(s) 591
Hin6I GCGC 1 cut(s) 444
HinP1I GCGC 1 cut(s) 444
HincII GTYRAC 1 cut(s) 589
HindII GTYRAC 1 cut(s) 589
HindIII AAGCTT 4 cut(s) 495, 1039, 1279, 1909
HpaII CCGG 3 cut(s) 101, 607, 1678
HphI GGTGA 5 cut(s) 115, 237, 1069, 1252, 1886
Hpy166II GTNNAC 5 cut(s) 532, 589, 697, 1303, 2089
Hpy188III TCNNGA 9 cut(s) 16, 128, 281, 730, 980, 1777, 1853, 2171, 2185
Hpy8I GTNNAC 5 cut(s) 532, 589, 697, 1303, 2089
Hpy99I CGWCG 4 cut(s) 466, 593, 635, 2006
HpyAV CCTTC 4 cut(s) 755, 1048, 1231, 1933
HpyCH4III ACNGT 5 cut(s) 1134, 1300, 2056, 2077, 2200
HpyCH4IV ACGT 5 cut(s) 255, 528, 591, 2085, 2330
HpyF10VI GCNNNNNNNGC 9 cut(s) 83, 86, 229, 275, 482, 983, 992, 1162, 1482
HpyF3I CTNAG 3 cut(s) 161, 738, 2183
HpySE526I ACGT 5 cut(s) 255, 528, 591, 2085, 2330
Hsp92I GRCGYC 1 cut(s) 591
HspAI GCGC 1 cut(s) 444
Ksp22I TGATCA 2 cut(s) 12, 1986
Kzo9I GATC 3 cut(s) 12, 1657, 1986
LmnI GCTCC 4 cut(s) 431, 652, 991, 2070
Lsp1109I GCAGC 9 cut(s) 152, 210, 256, 259, 287, 1198, 1485, 1633, 2242
LweI GCATC 4 cut(s) 177, 562, 973, 1633
MaeI CTAG 7 cut(s) 66, 720, 1121, 1329, 1853, 1974, 2162
MaeII ACGT 5 cut(s) 255, 528, 591, 2085, 2330
MaeIII GTNAC 5 cut(s) 1021, 1456, 1804, 2024, 2077
MalI GATC 3 cut(s) 14, 1659, 1988
MbiI CCGCTC 2 cut(s) 426, 449
MboI GATC 3 cut(s) 12, 1657, 1986
MflI RGATCY 1 cut(s) 1657
MhlI GDGCHC 4 cut(s) 487, 888, 979, 1740
MlsI TGGCCA 2 cut(s) 671, 1001
MluNI TGGCCA 2 cut(s) 671, 1001
MlyI GAGTC 5 cut(s) 123, 452, 1352, 1597, 2011
MmeI TCCRAC 2 cut(s) 1083, 2092
Mox20I TGGCCA 2 cut(s) 671, 1001
Mph1103I ATGCAT 1 cut(s) 1768
MroXI GAANNNNTTC 2 cut(s) 1626, 2220
MscI TGGCCA 2 cut(s) 671, 1001
MseI TTAA 6 cut(s) 1215, 1428, 1866, 2039, 2051, 2210
MslI CAYNNNNRTG 2 cut(s) 173, 1733
Msp20I TGGCCA 2 cut(s) 671, 1001
MspA1I CMGCKG 1 cut(s) 269
MspI CCGG 3 cut(s) 101, 607, 1678
MspR9I CCNGG 4 cut(s) 220, 608, 936, 1353
MvaI CCWGG 3 cut(s) 220, 936, 1353
MvnI CGCG 2 cut(s) 77, 444
MwoI GCNNNNNNNGC 9 cut(s) 83, 86, 229, 275, 482, 983, 992, 1162, 1482
NciI CCSGG 1 cut(s) 608
NcoI CCATGG 3 cut(s) 1002, 1932, 2316
NdeI CATATG 1 cut(s) 1991
NdeII GATC 3 cut(s) 12, 1657, 1986
NlaIV GGNNCC 1 cut(s) 1796
NmuCI GTSAC 2 cut(s) 1021, 1456
NsiI ATGCAT 1 cut(s) 1768
NspI RCATGY 3 cut(s) 178, 703, 802
NspV TTCGAA 1 cut(s) 1515
PaeR7I CTCGAG 1 cut(s) 887
PagI TCATGA 1 cut(s) 979
PciI ACATGT 3 cut(s) 174, 699, 798
PcsI WCGNNNNNNNCGW 2 cut(s) 534, 543
PdmI GAANNNNTTC 2 cut(s) 1626, 2220
PfeI GAWTC 5 cut(s) 326, 597, 1387, 1466, 1715
PinAI ACCGGT 1 cut(s) 1677
PleI GAGTC 5 cut(s) 122, 452, 1352, 1596, 2011
PpsI GAGTC 5 cut(s) 122, 452, 1352, 1596, 2011
Ppu21I YACGTR 1 cut(s) 529
PpuMI RGGWCCY 2 cut(s) 1795, 2187
PscI ACATGT 3 cut(s) 174, 699, 798
PshAI GACNNNNGTC 1 cut(s) 683
PsiI TTATAA 1 cut(s) 353
Psp124BI GAGCTC 1 cut(s) 888
Psp1406I AACGTT 1 cut(s) 2330
Psp5II RGGWCCY 2 cut(s) 1795, 2187
Psp6I CCWGG 3 cut(s) 218, 934, 1351
PspGI CCWGG 3 cut(s) 218, 934, 1351
PspN4I GGNNCC 1 cut(s) 1796
PspPI GGNCC 8 cut(s) 283, 320, 609, 627, 1680, 1795, 1883, 2187
PspPPI RGGWCCY 2 cut(s) 1795, 2187
PspXI VCTCGAGB 1 cut(s) 887
PsrI GAACNNNNNNTAC 2 cut(s) 1295, 1327
PstI CTGCAG 1 cut(s) 277
PstNI CAGNNNCTG 2 cut(s) 272, 1718
PsuI RGATCY 1 cut(s) 1657
PvuII CAGCTG 1 cut(s) 269
RsaI GTAC 4 cut(s) 434, 615, 718, 877
RsaNI GTAC 4 cut(s) 433, 614, 717, 876
RseI CAYNNNNRTG 2 cut(s) 173, 1733
SacI GAGCTC 1 cut(s) 888
SalI GTCGAC 1 cut(s) 587
SaqAI TTAA 6 cut(s) 1215, 1428, 1866, 2039, 2051, 2210
Sau3AI GATC 3 cut(s) 12, 1657, 1986
Sau96I GGNCC 8 cut(s) 283, 320, 609, 627, 1680, 1795, 1883, 2187
SchI GAGTC 5 cut(s) 123, 452, 1352, 1597, 2011
ScrFI CCNGG 4 cut(s) 220, 608, 936, 1353
SduI GDGCHC 4 cut(s) 487, 888, 979, 1740
SfaNI GCATC 4 cut(s) 177, 562, 973, 1633
SfcI CTRYAG 1 cut(s) 273
Sfr274I CTCGAG 1 cut(s) 887
SfuI TTCGAA 1 cut(s) 1515
SinI GGWCC 4 cut(s) 283, 1680, 1795, 2187
SlaI CTCGAG 1 cut(s) 887
SmiMI CAYNNNNRTG 2 cut(s) 173, 1733
SmlI CTYRAG 1 cut(s) 887
SmoI CTYRAG 1 cut(s) 887
SnaBI TACGTA 1 cut(s) 529
SpeI ACTAGT 2 cut(s) 1120, 1328
SsiI CCGC 9 cut(s) 77, 86, 396, 424, 442, 447, 819, 2031, 2252
SspI AATATT 1 cut(s) 22
SspMI CTAG 7 cut(s) 66, 720, 1121, 1329, 1853, 1974, 2162
SstI GAGCTC 1 cut(s) 888
StyD4I CCNGG 4 cut(s) 218, 606, 934, 1351
StyI CCWWGG 4 cut(s) 990, 1002, 1932, 2316
TaaI ACNGT 5 cut(s) 1134, 1300, 2056, 2077, 2200
TaiI ACGT 5 cut(s) 258, 531, 594, 2088, 2333
TatI WGTACW 1 cut(s) 875
TauI GCSGC 4 cut(s) 80, 89, 449, 2255
TfiI GAWTC 5 cut(s) 326, 597, 1387, 1466, 1715
Tru1I TTAA 6 cut(s) 1215, 1428, 1866, 2039, 2051, 2210
Tru9I TTAA 6 cut(s) 1215, 1428, 1866, 2039, 2051, 2210
TscAI CASTG 2 cut(s) 1137, 1303
TseFI GTSAC 2 cut(s) 1021, 1456
TseI GCWGC 9 cut(s) 165, 223, 269, 272, 275, 1186, 1473, 1646, 2255
Tsp45I GTSAC 2 cut(s) 1021, 1456
TspGWI ACGGA 1 cut(s) 814
TspRI CASTG 2 cut(s) 1137, 1303
VpaK11BI GGWCC 4 cut(s) 283, 1680, 1795, 2187
XapI RAATTY 2 cut(s) 1060, 1285
XbaI TCTAGA 1 cut(s) 1852
XceI RCATGY 3 cut(s) 178, 703, 802
XhoI CTCGAG 1 cut(s) 887
XmiI GTMKAC 2 cut(s) 531, 588
XmnI GAANNNNTTC 2 cut(s) 1626, 2220
XspI CTAG 7 cut(s) 66, 720, 1121, 1329, 1853, 1974, 2162
ZraI GACGTC 1 cut(s) 592
Zsp2I ATGCAT 1 cut(s) 1768
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.