pycom15g05560

Glutamate receptor

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Reverse (-)
3312592 .. 3313268
677 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g05560.2

Sequence Viewer

Length: 636 bp
ATGATGGATGAAGGCTATGTTTGGATAATGACCAATGGGATGACTAACAGTTTTACTTCCTCGAGTTCTTCTGTCGACATAGATGACATGCAAGGGGTGTTGGGTTTAAAAACTTATGTTCCCATTACAAAAGAGCTTGAAAGTTTTAGAGCTAGATGGCAAACAAAATTCCGACAAGACAATCCAACTATCCCTAGTGTTAAACTGGATGTTTTTGGGTTGTGGGCGTATGATGCCGCTTGGGCACTAGCCATGGCAGTTGAGAAGGTTGGAACAACAAACTTCCACTTCCAGAAGATGAACGATTCTGGCAATTCCACTGGTTCGGAGAGATTAGAGGTCTCTCAAAGTGGTACTGAACTTGTCCGAGAACTATCAGGTACAAGATTCCGAGGTCTTTCAGGAGATTTCAGCCTTATTAATAGGCAACTACAATCATCAACTTTTCAGGTAGTTAATGTGAATGATAATGGGGAAAGAGGGATTGGATATTGGACACCCAAAAATAGACTCGTAAGAAACATTAAATCGGACAAAAATACAAGCAGACACTCTACTTCTAATGCCAGTCTTGGACCTATTATATGGCCTGGAGACACCACCTCGGTTCCAAGGGGTTGTGAAAGAAGGGTTTGA

Protein Analysis

212

Amino Acids

23.57

Weight (kDa)

8.73

Isoelectric Point (pI)

26.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 75
AciI CCGC 1 cut(s) 237
AcsI RAATTY 1 cut(s) 167
AfaI GTAC 2 cut(s) 355, 382
AgsI TTSAA 1 cut(s) 140
AjnI CCWGG 1 cut(s) 589
AjuI GAANNNNNNNTTGG 2 cut(s) 468, 500
AluBI AGCT 2 cut(s) 136, 152
AluI AGCT 2 cut(s) 136, 152
Alw26I GTCTC 2 cut(s) 346, 588
Ama87I CYCGRG 1 cut(s) 61
AoxI GGCC 1 cut(s) 587
ApoI RAATTY 1 cut(s) 167
AseI ATTAAT 1 cut(s) 420
AspS9I GGNCC 1 cut(s) 575
AvaI CYCGRG 1 cut(s) 61
AvaII GGWCC 1 cut(s) 575
BaeGI GKGCMC 1 cut(s) 247
BccI CCATC 1 cut(s) 150
BciT130I CCWGG 1 cut(s) 591
BcoDI GTCTC 2 cut(s) 346, 588
BfaI CTAG 3 cut(s) 153, 195, 248
BglI GCCNNNNNGGC 1 cut(s) 242
BisI GCNGC 1 cut(s) 237
BlsI GCNGC 1 cut(s) 238
Bme1390I CCNGG 1 cut(s) 591
Bme18I GGWCC 1 cut(s) 575
BmeT110I CYCGRG 1 cut(s) 61
BmgT120I GGNCC 1 cut(s) 575
BmiI GGNNCC 1 cut(s) 609
BmrFI CCNGG 1 cut(s) 591
BmsI GCATC 1 cut(s) 223
BpmI CTGGAG 1 cut(s) 612
BsaI GGTCTC 1 cut(s) 346
BsaJI CCNNGG 4 cut(s) 252, 391, 603, 611
Bse1I ACTGG 3 cut(s) 210, 325, 567
BseBI CCWGG 1 cut(s) 591
BseDI CCNNGG 4 cut(s) 252, 391, 603, 611
BseGI GGATG 3 cut(s) 13, 45, 214
BseNI ACTGG 3 cut(s) 210, 325, 567
BseSI GKGCMC 1 cut(s) 247
BshFI GGCC 1 cut(s) 589
BsiHKCI CYCGRG 1 cut(s) 61
BsmAI GTCTC 2 cut(s) 346, 588
BsnI GGCC 1 cut(s) 589
Bso31I GGTCTC 1 cut(s) 346
BsoBI CYCGRG 1 cut(s) 61
Bsp1286I GDGCHC 1 cut(s) 247
Bsp19I CCATGG 1 cut(s) 252
BspACI CCGC 1 cut(s) 237
BspANI GGCC 1 cut(s) 589
BspLI GGNNCC 1 cut(s) 609
BspTNI GGTCTC 1 cut(s) 346
BsrI ACTGG 3 cut(s) 210, 325, 567
BssECI CCNNGG 4 cut(s) 252, 391, 603, 611
BssT1I CCWWGG 2 cut(s) 252, 611
Bst2UI CCWGG 1 cut(s) 591
Bst4CI ACNGT 1 cut(s) 50
BstDSI CCRYGG 1 cut(s) 252
BstF5I GGATG 3 cut(s) 13, 45, 214
BstMAI GTCTC 2 cut(s) 346, 588
BstMWI GCNNNNNNNGC 2 cut(s) 233, 242
BstNI CCWGG 1 cut(s) 591
BstNSI RCATGY 1 cut(s) 91
BstSCI CCNGG 1 cut(s) 589
BstSLI GKGCMC 1 cut(s) 247
BsuRI GGCC 1 cut(s) 589
BtgI CCRYGG 1 cut(s) 252
BtsCI GGATG 3 cut(s) 13, 45, 214
BtsIMutI CAGTG 1 cut(s) 318
Cfr13I GGNCC 1 cut(s) 575
Csp6I GTAC 2 cut(s) 354, 381
CviAII CATG 2 cut(s) 88, 253
CviJI RGCY 6 cut(s) 15, 136, 152, 251, 414, 589
CviKI_1 RGCY 6 cut(s) 15, 136, 152, 251, 414, 589
CviQI GTAC 2 cut(s) 354, 381
DraI TTTAAA 1 cut(s) 108
Eco130I CCWWGG 2 cut(s) 252, 611
Eco31I GGTCTC 1 cut(s) 346
Eco47I GGWCC 1 cut(s) 575
Eco88I CYCGRG 1 cut(s) 61
EcoRII CCWGG 1 cut(s) 589
EcoT14I CCWWGG 2 cut(s) 252, 611
ErhI CCWWGG 2 cut(s) 252, 611
FaeI CATG 2 cut(s) 91, 256
FaiI YATR 8 cut(s) 18, 80, 89, 117, 231, 254, 584, 586
FatI CATG 2 cut(s) 87, 252
FblI GTMKAC 1 cut(s) 75
Fnu4HI GCNGC 1 cut(s) 237
FokI GGATG 3 cut(s) 20, 52, 221
Fsp4HI GCNGC 1 cut(s) 237
FspBI CTAG 3 cut(s) 153, 195, 248
GluI GCNGC 1 cut(s) 237
GsuI CTGGAG 1 cut(s) 612
HaeIII GGCC 1 cut(s) 589
Hin1II CATG 2 cut(s) 91, 256
HincII GTYRAC 1 cut(s) 76
HindII GTYRAC 1 cut(s) 76
HinfI GANTC 3 cut(s) 305, 387, 510
Hpy166II GTNNAC 1 cut(s) 76
Hpy188I TCNGA 5 cut(s) 173, 328, 368, 392, 532
Hpy188III TCNNGA 2 cut(s) 292, 402
Hpy8I GTNNAC 1 cut(s) 76
HpyAV CCTTC 3 cut(s) 5, 259, 621
HpyCH4III ACNGT 1 cut(s) 50
HpyCH4V TGCA 1 cut(s) 91
HpyF10VI GCNNNNNNNGC 2 cut(s) 233, 242
Hsp92II CATG 2 cut(s) 91, 256
LweI GCATC 1 cut(s) 223
MaeI CTAG 3 cut(s) 153, 195, 248
MboII GAAGA 2 cut(s) 60, 307
MhlI GDGCHC 1 cut(s) 247
MluCI AATT 2 cut(s) 167, 313
MlyI GAGTC 1 cut(s) 504
MmeI TCCRAC 3 cut(s) 196, 209, 250
MnlI CCTC 5 cut(s) 70, 331, 386, 473, 613
MseI TTAA 5 cut(s) 107, 201, 420, 456, 525
MspR9I CCNGG 1 cut(s) 591
MvaI CCWGG 1 cut(s) 591
MwoI GCNNNNNNNGC 2 cut(s) 233, 242
NcoI CCATGG 1 cut(s) 252
NlaIII CATG 2 cut(s) 91, 256
NlaIV GGNNCC 1 cut(s) 609
NspI RCATGY 1 cut(s) 91
PaeR7I CTCGAG 1 cut(s) 61
PfeI GAWTC 2 cut(s) 305, 387
PkrI GCNGC 1 cut(s) 238
PleI GAGTC 1 cut(s) 504
PpsI GAGTC 1 cut(s) 504
PshBI ATTAAT 1 cut(s) 420
Psp6I CCWGG 1 cut(s) 589
PspGI CCWGG 1 cut(s) 589
PspN4I GGNNCC 1 cut(s) 609
PspPI GGNCC 1 cut(s) 575
PspXI VCTCGAGB 1 cut(s) 61
RsaI GTAC 2 cut(s) 355, 382
RsaNI GTAC 2 cut(s) 354, 381
SalI GTCGAC 1 cut(s) 74
SaqAI TTAA 5 cut(s) 107, 201, 420, 456, 525
SatI GCNGC 1 cut(s) 237
Sau96I GGNCC 1 cut(s) 575
SchI GAGTC 1 cut(s) 504
ScrFI CCNGG 1 cut(s) 591
SduI GDGCHC 1 cut(s) 247
SetI ASST 9 cut(s) 138, 154, 270, 342, 382, 397, 453, 580, 605
SfaNI GCATC 1 cut(s) 223
Sfr274I CTCGAG 1 cut(s) 61
SinI GGWCC 1 cut(s) 575
SlaI CTCGAG 1 cut(s) 61
SmlI CTYRAG 1 cut(s) 61
SmoI CTYRAG 1 cut(s) 61
Sse9I AATT 2 cut(s) 167, 313
SsiI CCGC 1 cut(s) 237
SspMI CTAG 3 cut(s) 153, 195, 248
StyD4I CCNGG 1 cut(s) 589
StyI CCWWGG 2 cut(s) 252, 611
TaaI ACNGT 1 cut(s) 50
TaqI TCGA 2 cut(s) 62, 75
TasI AATT 2 cut(s) 167, 313
TauI GCSGC 1 cut(s) 239
TfiI GAWTC 2 cut(s) 305, 387
Tru1I TTAA 5 cut(s) 107, 201, 420, 456, 525
Tru9I TTAA 5 cut(s) 107, 201, 420, 456, 525
TscAI CASTG 1 cut(s) 325
TspDTI ATGAA 2 cut(s) 24, 314
TspRI CASTG 1 cut(s) 325
VpaK11BI GGWCC 1 cut(s) 575
VspI ATTAAT 1 cut(s) 420
XapI RAATTY 1 cut(s) 167
XceI RCATGY 1 cut(s) 91
XhoI CTCGAG 1 cut(s) 61
XmiI GTMKAC 1 cut(s) 75
XspI CTAG 3 cut(s) 153, 195, 248
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.