RchiOBHm_Chr6g0269681

Glutamate receptor

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Forward (+)
27038551 .. 27040844
2294 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ24191

Sequence Viewer

Length: 1719 bp
ATGATCAACACATCAATTGATCTTGAAACTTTTAGGGTCTCCCAAAGTGGCCAACTACTTCGCCAATCCTTGTCACGTACTAGATTTAAAGGTCTAACTGGAGATTTCAGTTTTGTTAATGGGGAGTTACAATCTTCAGCATTTGAAATAGTGAATGTGAATGGTCATGGAACAGTAAGAACTATTGGATTTTGGACATCACAGGGTGGACTTTTGAAAAAGATTTCACTCAATTGTACAAATGCAAACAATGTGGGATTGGGATCTATTATATGGCCCAGAGATTCTACCTCTATTCCAAAGGGATGGGAGATCCCCACAAATGGGAAAAAGTTGAGAGTAGGAGTTCCTGTGGATAATGGTTTTCCTGAATTTGTTAAGGTGGTACTTGATCCCATCACAAATACTACAGAAGCAACTGGTTCGTGTATAGACATATTTAATGCTGCAATACAAAAATTACCATATGCTGTTACTTATGACTTCATTCCCTTTGCTTTGAGCAAGCCTGATGGGACTCCTGCTAGCACATATAATGATTTGAACTTCGATGATGTAGTAGCAGCGACGACAATTAGAGGAAACAGGTCTTTGTATGTGGACTTCACATTGCCTTTCACTGAATCAGGAGTAGGGATGTTGGTGCTAATGAAAGATCAGAACAAGAGTAAAAATGCGTGGTTCTTCTTGCAACCTTTGGCCAAGGACCTTTGTCTCTCAACTGTTTGCTGTTTTATCTTCATAGCTTTTGTGATTTGGTTTCTGGAACATCGTATTAATGAAGACTTTCGCGGAAATCCTTGGTGTCAAATCAGCACAAGCTTTTGGTTTTCATTCTCAACAATCACTTTCTCGCAAAAGAGAGTGGTTAGCAATTCGGCAAGGTTTGTGGTGCTCATCTGGGTGTTCGTTATAATGATATTGACACAAAGCTACACGGCCAGTCTAATGTCACGATTAACTATCCAACAACTCCAGCCAACTTATACCAACATAAACGAGCTTATAAACAACAAGGAGTATGTGGGCTACCCGGAGGGTTCTTTTGTATATGAGCTTTTGATACAAAGTGGTTTTGATCCTTCCATGATTAGGGTCTATAAATCGAAAGATGAGTGTGATGATCTTTTGACAAAAGGGAGTAGAACAGGTGGTATTTCCGCCGCCATTGACGAAACACCCTTCATTAGGCTTTTTCTTGCAAAATTTTGCTCAAAATATACCATGGTTGGGCCAATATTTAAAACTGATGGTTTTGCCTTCGTATTTCGTAAAGGTTCTCCTCTTGCACCTGATATTTCAAGGGCAATTTTGAACGTGACCGAGGGAGACAAGATGAAAGAAATTGAAAAAAAATGGTTCAGTAAACAAACTGAGTGTTCAACTACTAAACCAATGGTCTCTGAGTCCAAGAAGCTTGGGCTTGATACCTTTTGGGGTCTATTTTCAGTTGTCGGGGCTGCTTCACTATTTGCTCTCCTCATATCAACACTTTACTTTTGTACACATGATGATGATAGTGTAATTGTTACTAGCACCCCGCCAAATGACGCATCTAACACAGATTTCAACGACTCACCAAGTGAACAAGGAACACCAGTTGATCAACGATCTTTGATAATACCAATGCATATTGGCACTGAGTCGGACAGTTTGAACCATCAAATACTAGCGAACACTAGTCCTCAACATGAAGGAGCTGAAGAAAACAATGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

572

Amino Acids

63.6

Weight (kDa)

5.57

Isoelectric Point (pI)

36.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ANF_receptor PF01094 6 - 55 3.3e-06 Receptor family ligand binding region
SBP_bac_3 PF00497 135 - 455 1.1e-07 Bacterial extracellular solute-binding proteins, family 3
Lig_chan PF00060 239 - 488 3.2e-33 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 914, 1007
AccII CGCG 1 cut(s) 792
AciI CCGC 4 cut(s) 792, 1161, 1164, 1541
AclWI GGATC 4 cut(s) 271, 307, 386, 1073
AcoI YGGCCR 3 cut(s) 49, 699, 939
AcsI RAATTY 2 cut(s) 371, 1205
AcuI CTGAAG 1 cut(s) 120
AdeI CACNNNGTG 2 cut(s) 206, 1583
AfaI GTAC 4 cut(s) 79, 238, 387, 1504
AfiI CCNNNNNNNGG 5 cut(s) 323, 324, 1092, 1188, 1230
AhlI ACTAGT 1 cut(s) 1679
AluBI AGCT 7 cut(s) 746, 822, 933, 1003, 1057, 1417, 1700
AluI AGCT 7 cut(s) 746, 822, 933, 1003, 1057, 1417, 1700
Alw21I GWGCWC 1 cut(s) 897
Alw26I GTCTC 4 cut(s) 43, 719, 1323, 1405
AlwI GGATC 4 cut(s) 271, 307, 386, 1073
AoxI GGCC 5 cut(s) 49, 275, 699, 939, 1232
ApeKI GCWGC 3 cut(s) 446, 563, 1460
ApoI RAATTY 2 cut(s) 371, 1205
AseI ATTAAT 1 cut(s) 777
Asp700I GAANNNNTTC 1 cut(s) 786
AspS9I GGNCC 3 cut(s) 276, 706, 1232
AsuC2I CCSGG 1 cut(s) 1034
AsuHPI GGTGA 1 cut(s) 1569
AsuNHI GCTAGC 1 cut(s) 524
AvaII GGWCC 1 cut(s) 706
BalI TGGCCA 2 cut(s) 51, 701
BarI GAAGNNNNNNTAC 2 cut(s) 587, 619
BbsI GAAGAC 1 cut(s) 789
Bbv12I GWGCWC 1 cut(s) 897
BbvI GCAGC 3 cut(s) 433, 575, 1447
BccI CCATC 5 cut(s) 300, 404, 506, 1244, 1668
BceAI ACGGC 1 cut(s) 954
BcgI CGANNNNNNTGC 2 cut(s) 405, 439
BclI TGATCA 2 cut(s) 3, 1603
BcnI CCSGG 1 cut(s) 1034
BcoDI GTCTC 4 cut(s) 43, 719, 1323, 1405
BcuI ACTAGT 1 cut(s) 1679
BfaI CTAG 5 cut(s) 81, 525, 1533, 1670, 1680
BfmI CTRYAG 1 cut(s) 408
BisI GCNGC 4 cut(s) 447, 564, 1164, 1461
BlsI GCNGC 4 cut(s) 448, 565, 1165, 1462
Bme1390I CCNGG 1 cut(s) 1034
Bme18I GGWCC 1 cut(s) 706
BmgT120I GGNCC 3 cut(s) 276, 706, 1232
BmrFI CCNGG 1 cut(s) 1034
BmsI GCATC 1 cut(s) 1562
BmtI GCTAGC 1 cut(s) 528
BoxI GACNNNNGTC 1 cut(s) 711
BpiI GAAGAC 1 cut(s) 789
BpmI CTGGAG 2 cut(s) 120, 959
BpuMI CCSGG 1 cut(s) 1034
BsaAI YACGTR 1 cut(s) 77
BsaBI GATNNNNATC 1 cut(s) 262
BsaI GGTCTC 2 cut(s) 43, 1405
BsaJI CCNNGG 4 cut(s) 702, 800, 1224, 1323
BsaXI ACNNNNNCTCC 2 cut(s) 336, 366
Bsc4I CCNNNNNNNGG 5 cut(s) 323, 324, 1092, 1188, 1230
Bse1I ACTGG 4 cut(s) 103, 424, 942, 1598
Bse3DI GCAATG 1 cut(s) 608
Bse8I GATNNNNATC 1 cut(s) 262
BseDI CCNNGG 4 cut(s) 702, 800, 1224, 1323
BseGI GGATG 2 cut(s) 311, 642
BseJI GATNNNNATC 1 cut(s) 262
BseLI CCNNNNNNNGG 5 cut(s) 323, 324, 1092, 1188, 1230
BseMI GCAATG 1 cut(s) 608
BseMII CTCAG 3 cut(s) 1365, 1395, 1632
BseNI ACTGG 4 cut(s) 103, 424, 942, 1598
BseRI GAGGAG 2 cut(s) 1272, 1469
BseXI GCAGC 3 cut(s) 433, 575, 1447
Bsh1236I CGCG 1 cut(s) 792
BshFI GGCC 5 cut(s) 51, 277, 701, 941, 1234
BsiHKAI GWGCWC 1 cut(s) 897
BsiSI CCGG 1 cut(s) 1034
BslFI GGGAC 1 cut(s) 529
BslI CCNNNNNNNGG 5 cut(s) 323, 324, 1092, 1188, 1230
BsmAI GTCTC 4 cut(s) 43, 719, 1323, 1405
BsmFI GGGAC 1 cut(s) 529
BsnI GGCC 5 cut(s) 51, 277, 701, 941, 1234
Bso31I GGTCTC 2 cut(s) 43, 1405
Bsp1286I GDGCHC 1 cut(s) 897
Bsp1407I TGTACA 2 cut(s) 236, 1502
Bsp19I CCATGG 1 cut(s) 1224
BspACI CCGC 4 cut(s) 792, 1161, 1164, 1541
BspANI GGCC 5 cut(s) 51, 277, 701, 941, 1234
BspCNI CTCAG 3 cut(s) 1366, 1396, 1633
BspFNI CGCG 1 cut(s) 792
BspOI GCTAGC 1 cut(s) 528
BspPI GGATC 4 cut(s) 271, 307, 386, 1073
BspTNI GGTCTC 2 cut(s) 43, 1405
BsrDI GCAATG 1 cut(s) 608
BsrGI TGTACA 2 cut(s) 236, 1502
BsrI ACTGG 4 cut(s) 103, 424, 942, 1598
BssECI CCNNGG 4 cut(s) 702, 800, 1224, 1323
BssT1I CCWWGG 3 cut(s) 702, 800, 1224
Bst4CI ACNGT 3 cut(s) 175, 724, 1652
BstAUI TGTACA 2 cut(s) 236, 1502
BstBAI YACGTR 1 cut(s) 77
BstC8I GCNNGC 2 cut(s) 506, 526
BstDEI CTNAG 3 cut(s) 1374, 1404, 1641
BstDSI CCRYGG 1 cut(s) 1224
BstENI CCTNNNNNAGG 1 cut(s) 1186
BstF5I GGATG 2 cut(s) 311, 642
BstFNI CGCG 1 cut(s) 792
BstMAI GTCTC 4 cut(s) 43, 719, 1323, 1405
BstPAI GACNNNNGTC 1 cut(s) 711
BstSCI CCNGG 1 cut(s) 1032
BstSFI CTRYAG 1 cut(s) 408
BstUI CGCG 1 cut(s) 792
BstV1I GCAGC 3 cut(s) 433, 575, 1447
BstV2I GAAGAC 1 cut(s) 789
BstX2I RGATCY 2 cut(s) 263, 312
BstXI CCANNNNNNTGG 1 cut(s) 306
BstYI RGATCY 2 cut(s) 263, 312
BsuRI GGCC 5 cut(s) 51, 277, 701, 941, 1234
BtgI CCRYGG 1 cut(s) 1224
BtsCI GGATG 2 cut(s) 311, 642
BtsIMutI CAGTG 2 cut(s) 618, 1638
Cac8I GCNNGC 2 cut(s) 506, 526
Cfr13I GGNCC 3 cut(s) 276, 706, 1232
CseI GACGC 1 cut(s) 1559
Csp6I GTAC 4 cut(s) 78, 237, 386, 1503
CspCI CAANNNNNGTGG 4 cut(s) 234, 269, 870, 905
CviAII CATG 6 cut(s) 167, 1087, 1225, 1508, 1691, 1716
CviQI GTAC 4 cut(s) 78, 237, 386, 1503
DdeI CTNAG 3 cut(s) 1374, 1404, 1641
DraI TTTAAA 2 cut(s) 88, 1243
DraIII CACNNNGTG 2 cut(s) 206, 1583
EaeI YGGCCR 3 cut(s) 49, 699, 939
EciI GGCGGA 1 cut(s) 1150
Eco130I CCWWGG 3 cut(s) 702, 800, 1224
Eco31I GGTCTC 2 cut(s) 43, 1405
Eco47I GGWCC 1 cut(s) 706
Eco57I CTGAAG 1 cut(s) 120
EcoNI CCTNNNNNAGG 1 cut(s) 1186
EcoO109I RGGNCCY 1 cut(s) 706
EcoT14I CCWWGG 3 cut(s) 702, 800, 1224
EcoT22I ATGCAT 2 cut(s) 1632, 1717
ErhI CCWWGG 3 cut(s) 702, 800, 1224
FaeI CATG 6 cut(s) 170, 1090, 1228, 1511, 1694, 1719
FaqI GGGAC 1 cut(s) 529
FatI CATG 6 cut(s) 166, 1086, 1224, 1507, 1690, 1715
FauI CCCGC 1 cut(s) 1548
FauNDI CATATG 1 cut(s) 466
FbaI TGATCA 2 cut(s) 3, 1603
Fnu4HI GCNGC 4 cut(s) 447, 564, 1164, 1461
FokI GGATG 2 cut(s) 318, 649
Fsp4HI GCNGC 4 cut(s) 447, 564, 1164, 1461
FspBI CTAG 5 cut(s) 81, 525, 1533, 1670, 1680
GluI GCNGC 4 cut(s) 447, 564, 1164, 1461
GsuI CTGGAG 2 cut(s) 120, 959
HaeIII GGCC 5 cut(s) 51, 277, 701, 941, 1234
HapII CCGG 1 cut(s) 1034
HgaI GACGC 1 cut(s) 1559
Hin1II CATG 6 cut(s) 170, 1090, 1228, 1511, 1694, 1719
HindIII AAGCTT 2 cut(s) 820, 1415
HinfI GANTC 6 cut(s) 284, 517, 623, 1406, 1574, 1643
HpaII CCGG 1 cut(s) 1034
HphI GGTGA 1 cut(s) 1569
Hpy166II GTNNAC 5 cut(s) 209, 601, 1367, 1505, 1586
Hpy188I TCNGA 3 cut(s) 660, 1405, 1648
Hpy188III TCNNGA 5 cut(s) 23, 368, 627, 764, 954
Hpy8I GTNNAC 5 cut(s) 209, 601, 1367, 1505, 1586
Hpy99I CGWCG 1 cut(s) 571
HpyAV CCTTC 4 cut(s) 1092, 1192, 1270, 1688
HpyCH4III ACNGT 3 cut(s) 175, 724, 1652
HpyCH4IV ACGT 2 cut(s) 76, 1317
HpyCH4V TGCA 7 cut(s) 245, 449, 691, 1202, 1289, 1630, 1715
HpyF3I CTNAG 3 cut(s) 1374, 1404, 1641
HpySE526I ACGT 2 cut(s) 76, 1317
Hsp92II CATG 6 cut(s) 170, 1090, 1228, 1511, 1694, 1719
Ksp22I TGATCA 2 cut(s) 3, 1603
LmnI GCTCC 1 cut(s) 1697
Lsp1109I GCAGC 3 cut(s) 433, 575, 1447
LweI GCATC 1 cut(s) 1562
MaeI CTAG 5 cut(s) 81, 525, 1533, 1670, 1680
MaeII ACGT 2 cut(s) 76, 1317
MaeIII GTNAC 6 cut(s) 72, 126, 472, 951, 1318, 1528
MboII GAAGA 5 cut(s) 126, 676, 730, 794, 1715
MfeI CAATTG 2 cut(s) 15, 232
MflI RGATCY 2 cut(s) 263, 312
MhlI GDGCHC 1 cut(s) 897
MlsI TGGCCA 2 cut(s) 51, 701
MluNI TGGCCA 2 cut(s) 51, 701
MlyI GAGTC 4 cut(s) 511, 1415, 1568, 1652
MmeI TCCRAC 2 cut(s) 991, 1626
MnlI CCTC 7 cut(s) 301, 572, 1030, 1293, 1318, 1490, 1695
Mox20I TGGCCA 2 cut(s) 51, 701
Mph1103I ATGCAT 2 cut(s) 1632, 1717
MroXI GAANNNNTTC 1 cut(s) 786
MscI TGGCCA 2 cut(s) 51, 701
MseI TTAA 7 cut(s) 87, 117, 378, 441, 777, 959, 1242
MslI CAYNNNNRTG 2 cut(s) 902, 1512
Msp20I TGGCCA 2 cut(s) 51, 701
MspI CCGG 1 cut(s) 1034
MspR9I CCNGG 1 cut(s) 1034
MunI CAATTG 2 cut(s) 15, 232
MvnI CGCG 1 cut(s) 792
NciI CCSGG 1 cut(s) 1034
NcoI CCATGG 1 cut(s) 1224
NdeI CATATG 1 cut(s) 466
NheI GCTAGC 1 cut(s) 524
NlaIII CATG 6 cut(s) 170, 1090, 1228, 1511, 1694, 1719
NmuCI GTSAC 3 cut(s) 72, 951, 1318
NsiI ATGCAT 2 cut(s) 1632, 1717
PdmI GAANNNNTTC 1 cut(s) 786
PfeI GAWTC 2 cut(s) 284, 623
PkrI GCNGC 4 cut(s) 448, 565, 1165, 1462
PleI GAGTC 4 cut(s) 511, 1414, 1568, 1651
PpsI GAGTC 4 cut(s) 511, 1414, 1568, 1651
Ppu21I YACGTR 1 cut(s) 77
PpuMI RGGWCCY 1 cut(s) 706
PshAI GACNNNNGTC 1 cut(s) 711
PshBI ATTAAT 1 cut(s) 777
PsiI TTATAA 2 cut(s) 914, 1007
Psp5II RGGWCCY 1 cut(s) 706
PspPI GGNCC 3 cut(s) 276, 706, 1232
PspPPI RGGWCCY 1 cut(s) 706
PsuI RGATCY 2 cut(s) 263, 312
RsaI GTAC 4 cut(s) 79, 238, 387, 1504
RsaNI GTAC 4 cut(s) 78, 237, 386, 1503
RseI CAYNNNNRTG 2 cut(s) 902, 1512
SaqAI TTAA 7 cut(s) 87, 117, 378, 441, 777, 959, 1242
SatI GCNGC 4 cut(s) 447, 564, 1164, 1461
Sau96I GGNCC 3 cut(s) 276, 706, 1232
SchI GAGTC 4 cut(s) 511, 1415, 1568, 1652
ScrFI CCNGG 1 cut(s) 1034
SduI GDGCHC 1 cut(s) 897
SfaNI GCATC 1 cut(s) 1562
SfcI CTRYAG 1 cut(s) 408
SinI GGWCC 1 cut(s) 706
SmiMI CAYNNNNRTG 2 cut(s) 902, 1512
SpeI ACTAGT 1 cut(s) 1679
SsiI CCGC 4 cut(s) 792, 1161, 1164, 1541
SspI AATATT 1 cut(s) 1239
SspMI CTAG 5 cut(s) 81, 525, 1533, 1670, 1680
StyD4I CCNGG 1 cut(s) 1032
StyI CCWWGG 3 cut(s) 702, 800, 1224
TaaI ACNGT 3 cut(s) 175, 724, 1652
TaiI ACGT 2 cut(s) 79, 1320
TaqI TCGA 2 cut(s) 549, 1106
TaqII GACCGA 1 cut(s) 1337
TatI WGTACW 2 cut(s) 236, 1502
TauI GCSGC 1 cut(s) 1166
TfiI GAWTC 2 cut(s) 284, 623
Tru1I TTAA 7 cut(s) 87, 117, 378, 441, 777, 959, 1242
Tru9I TTAA 7 cut(s) 87, 117, 378, 441, 777, 959, 1242
TscAI CASTG 2 cut(s) 625, 1645
TseFI GTSAC 3 cut(s) 72, 951, 1318
TseI GCWGC 3 cut(s) 446, 563, 1460
Tsp45I GTSAC 3 cut(s) 72, 951, 1318
TspDTI ATGAA 8 cut(s) 475, 665, 730, 795, 822, 1174, 1352, 1707
TspRI CASTG 2 cut(s) 625, 1645
VpaK11BI GGWCC 1 cut(s) 706
VspI ATTAAT 1 cut(s) 777
XagI CCTNNNNNAGG 1 cut(s) 1186
XapI RAATTY 2 cut(s) 371, 1205
XmnI GAANNNNTTC 1 cut(s) 786
XspI CTAG 5 cut(s) 81, 525, 1533, 1670, 1680
Zsp2I ATGCAT 2 cut(s) 1632, 1717
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.