Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000218.1

Orthogroup ID

OG0000051

Physical Location & Seq

Genomic Coordinates Forward (+)

264914 .. 267812

Gene Structure 2899 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000218.1_g000062.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2103 bp

atggagactagctttgttattagtctcggagaggaagctcgagtgccaatcatttcattttctgcaacaagcccttctcttacttctctcagtagcccttactttttccagtttgcacagaatgactcatcccaagtaaaagccataagcgccattgtaaaaaattttgggtggagacatgttgtgcccatctacgtagacacttcatccggggaggcagtcataccatacttaattgatgccctggaagaggttaatgctcgtgtaccttatcgcagtgttatttccccaactgcaaccgatgatcagatcgaaaaagagctttacaagttgaagacaatgcaaactagggtctttgttctgcacatgacgcctgaactatgttctaggctagttcacaaggcaaatgagattggaatgatgactgagggctatgtttggatcacaaccaatgggttaacgaatagtttaaagactatcgattttgagttccttgatttgattgacggagtattaggtgtagaaacttatatcccaaggacaaaacaacttcaacagttcatgtcacgattgcatcggcagattcaaaaatacactacagtccgtttaaacttggatgttttcggactttgggcgtatgatgctacttttgcactagccatggctattgaacaagtatatgggaatacaactagtgttgtcccccaagacttaaatgttgcttccaataaactgactgatcttgaaagtgttgcggtttctcgagatggtccacaacttcgccaagctctgttaactactagatttcaaggcattgctggagatttcagccttattgatgggcaacttcaatcatcaacttttcagattgtgaatataaacggtggtgcatcaaggaaaataggattttggacaccgcaacatggactggtgaacaagacattcctcagttccaatattggacctattatatggccgggagattctctctatgttccaaaaggatgggagatcccaacgaatgggattaaactgaaaataggagttcctgtgaaggatggttttattgagcttgttaaggtaacaacagatccaagcactaacactacagatgtcacgggcttcagtattgatgtcttcaaggcagcagtagaaatgttaacatatgctcttccttatgactttgttcccttcaccaatcctgatggcaccaacaccgggctcacttacaatgatttgtgcgatcaagtacatctcgggcccactgttaccactctaaatgatctattacgaaatggggataatgttggctatgtaagaaattatgtccgtggtatcttgaatcaagtagggtttgacaattccaagcttaaggcttttgatactatggaagaaattgatgaagctctttctaaagggagtgcaaatggcggtattgccgctgttgttgatgaaagccccaacatgaagatttttattgcaaagtattgcaagaaatatgccatgctgggacccttcttcaaaactgatggctttgcttttgtgtttcctaaacattccccccttgtacgcgatgtttcacaagcactcctaaatgttacggaaggagaattgataatgaacattgaaaacaaatggtttaagaaggaaagccattgtcaagatctgaataccaatgtttctagcaaaagtcttggcactgacagtttttgggtcctcttcgtctttgtcgggttggtttcaacactagctctcatcatatttgtagcttccttcatttataggcataggcatgtgttggtgcactcggatactgattcaaaaccctcgacatcggaaaaggttcgagctatgttcaaaattttcaacgagaaagaccttaactatcacacttttaaaaccaagcagccacaagagacggctgaggcctcatcgaacaataatagctgcccaagaagtccagttctccaccacaatccaaaccatagggattcatattctgttttcgatatagagcaaccgcaatatgagtctccagaagaagctcttgctactactgatgatgttgtcacggttcaagaaatgcacagaaccactccgtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0007154 GO:0007165 GO:0008066 GO:0008150 GO:0008324 GO:0009719 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0043200 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046873 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

700

Amino Acids

78.08

Weight (kDa)

5.58

Isoelectric Point (pI)

37.23

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000051)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca	FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica	MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica	Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis	pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis	RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata	RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora	Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii	Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa	Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha	Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana	Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1208
AccB7I	CCANNNNNTGG	1 cut(s)	1022
AccI	GTMKAC	1 cut(s)	198
AccII	CGCG	1 cut(s)	1572
AciI	CCGC	5 cut(s)	755, 917, 1431, 1440, 2021
AclWI	GGATC	3 cut(s)	449, 1006, 1085
AcoI	YGGCCR	1 cut(s)	974
AcsI	RAATTY	2 cut(s)	163, 1860
AcuI	CTGAAG	1 cut(s)	1108
AcyI	GRCGYC	1 cut(s)	371
AdeI	CACNNNGTG	1 cut(s)	2100
AfaI	GTAC	3 cut(s)	267, 1251, 1569
AfiI	CCNNNNNNNGG	4 cut(s)	250, 923, 1022, 1218
AflII	CTTAAG	1 cut(s)	1370
AflIII	ACRYGT	1 cut(s)	178
AhlI	ACTAGT	1 cut(s)	692
AjnI	CCWGG	1 cut(s)	243
Alw21I	GWGCWC	1 cut(s)	1806
Alw26I	GTCTC	4 cut(s)	29, 169, 1910, 2037
Alw44I	GTGCAC	1 cut(s)	1802
AlwI	GGATC	3 cut(s)	449, 1006, 1085
Ama87I	CYCGRG	3 cut(s)	39, 762, 1256
AoxI	GGCC	3 cut(s)	974, 1259, 1926
ApaI	GGGCCC	1 cut(s)	1263
ApaLI	GTGCAC	1 cut(s)	1802
ApeKI	GCWGC	3 cut(s)	1145, 1906, 1947
ApoI	RAATTY	2 cut(s)	163, 1860
Asp700I	GAANNNNTTC	1 cut(s)	1842
AspLEI	GCGC	1 cut(s)	152
AspS9I	GGNCC	6 cut(s)	770, 962, 1259, 1260, 1511, 1714
AsuC2I	CCSGG	3 cut(s)	211, 978, 1219
AsuHPI	GGTGA	2 cut(s)	943, 1186
AvaI	CYCGRG	3 cut(s)	39, 762, 1256
AvaII	GGWCC	4 cut(s)	770, 962, 1511, 1714
BaeGI	GKGCMC	3 cut(s)	189, 1263, 1806
BanI	GGYRCC	1 cut(s)	1208
BanII	GRGCYC	2 cut(s)	1224, 1263
BauI	CACGAG	1 cut(s)	261
BbsI	GAAGAC	2 cut(s)	341, 1129
Bbv12I	GWGCWC	1 cut(s)	1806
BbvCI	CCTCAGC	1 cut(s)	1923
BbvI	GCAGC	3 cut(s)	1157, 1918, 1934
BccI	CCATC	7 cut(s)	197, 761, 833, 999, 1052, 1199, 1523
BceAI	ACGGC	1 cut(s)	1935
BciT130I	CCWGG	1 cut(s)	245
BciVI	GTATCC	1 cut(s)	1804
BclI	TGATCA	1 cut(s)	304
BcnI	CCSGG	3 cut(s)	211, 978, 1219
BcoDI	GTCTC	4 cut(s)	29, 169, 1910, 2037
BcuI	ACTAGT	1 cut(s)	692
BfaI	CTAG	9 cut(s)	9, 348, 387, 392, 656, 693, 801, 1683, 1748
BfmI	CTRYAG	2 cut(s)	597, 1107
BfoI	RGCGCY	1 cut(s)	153
BfrI	CTTAAG	1 cut(s)	1370
BfuI	GTATCC	1 cut(s)	1804
BglII	AGATCT	1 cut(s)	1663
BisI	GCNGC	4 cut(s)	1146, 1440, 1907, 1948
BlsI	GCNGC	4 cut(s)	1147, 1441, 1908, 1949
Bme1390I	CCNGG	4 cut(s)	211, 245, 978, 1219
Bme18I	GGWCC	4 cut(s)	770, 962, 1511, 1714
BmeT110I	CYCGRG	3 cut(s)	39, 762, 1256
BmgT120I	GGNCC	6 cut(s)	770, 962, 1259, 1260, 1511, 1714
BmiI	GGNNCC	5 cut(s)	1210, 1261, 1512, 1513, 1715
BmrFI	CCNGG	4 cut(s)	211, 245, 978, 1219
BmsI	GCATC	4 cut(s)	229, 583, 631, 899
BpiI	GAAGAC	2 cut(s)	341, 1129
BplI	GAGNNNNNCTC	2 cut(s)	972, 1004
BpmI	CTGGAG	2 cut(s)	840, 2019
Bpu10I	CCTNAGC	1 cut(s)	1923
BpuMI	CCSGG	3 cut(s)	211, 978, 1219
Bsa29I	ATCGAT	1 cut(s)	480
BsaAI	YACGTR	1 cut(s)	196
BsaHI	GRCGYC	1 cut(s)	371
BsaJI	CCNNGG	5 cut(s)	210, 243, 536, 660, 1330
BsaXI	ACNNNNNCTCC	4 cut(s)	1035, 1065, 1572, 1602
Bsc4I	CCNNNNNNNGG	4 cut(s)	250, 923, 1022, 1218
Bse1I	ACTGG	3 cut(s)	109, 933, 1961
Bse3DI	GCAATG	1 cut(s)	813
BseBI	CCWGG	1 cut(s)	245
BseCI	ATCGAT	1 cut(s)	480
BseDI	CCNNGG	5 cut(s)	210, 243, 536, 660, 1330
BseGI	GGATG	5 cut(s)	128, 206, 622, 1010, 1063
BseLI	CCNNNNNNNGG	4 cut(s)	250, 923, 1022, 1218
BseMI	GCAATG	1 cut(s)	813
BseMII	CTCAG	4 cut(s)	103, 417, 961, 1914
BseNI	ACTGG	3 cut(s)	109, 933, 1961
BseSI	GKGCMC	3 cut(s)	189, 1263, 1806
BseXI	GCAGC	3 cut(s)	1157, 1918, 1934
BseYI	CCCAGC	1 cut(s)	1507
BsgI	GTGCAG	1 cut(s)	347
Bsh1236I	CGCG	1 cut(s)	1572
BshFI	GGCC	3 cut(s)	976, 1261, 1928
BshNI	GGYRCC	1 cut(s)	1208
BshVI	ATCGAT	1 cut(s)	480
BsiHKAI	GWGCWC	1 cut(s)	1806
BsiHKCI	CYCGRG	3 cut(s)	39, 762, 1256
BsiSI	CCGG	3 cut(s)	210, 977, 1218
BslFI	GGGAC	2 cut(s)	686, 1524
BslI	CCNNNNNNNGG	4 cut(s)	250, 923, 1022, 1218
BsmAI	GTCTC	4 cut(s)	29, 169, 1910, 2037
BsmBI	CGTCTC	1 cut(s)	1910
BsmFI	GGGAC	2 cut(s)	686, 1524
BsnI	GGCC	3 cut(s)	976, 1261, 1928
BsoBI	CYCGRG	3 cut(s)	39, 762, 1256
Bsp120I	GGGCCC	1 cut(s)	1259
Bsp1286I	GDGCHC	4 cut(s)	189, 1224, 1263, 1806
Bsp143I	GATC	9 cut(s)	304, 309, 441, 739, 1011, 1090, 1243, 1282, 1663
Bsp19I	CCATGG	1 cut(s)	660
BspACI	CCGC	5 cut(s)	755, 917, 1431, 1440, 2021
BspANI	GGCC	3 cut(s)	976, 1261, 1928
BspCNI	CTCAG	4 cut(s)	102, 418, 960, 1915
BspDI	ATCGAT	1 cut(s)	480
BspFNI	CGCG	1 cut(s)	1572
BspLI	GGNNCC	5 cut(s)	1210, 1261, 1512, 1513, 1715
BspPI	GGATC	3 cut(s)	449, 1006, 1085
BspQI	GCTCTTC	1 cut(s)	1176
BspT107I	GGYRCC	1 cut(s)	1208
BspTI	CTTAAG	1 cut(s)	1370
BsrDI	GCAATG	1 cut(s)	813
BsrI	ACTGG	3 cut(s)	109, 933, 1961
BssECI	CCNNGG	5 cut(s)	210, 243, 536, 660, 1330
BssMI	GATC	9 cut(s)	304, 309, 441, 739, 1011, 1090, 1243, 1282, 1663
BssNI	GRCGYC	1 cut(s)	371
BssSI	CACGAG	1 cut(s)	261
BssT1I	CCWWGG	2 cut(s)	536, 660
Bst2BI	CACGAG	1 cut(s)	261
Bst2UI	CCWGG	1 cut(s)	245
Bst4CI	ACNGT	6 cut(s)	558, 601, 884, 1267, 1706, 2074
Bst6I	CTCTTC	3 cut(s)	243, 1176, 1724
BstACI	GRCGYC	1 cut(s)	371
BstAFI	CTTAAG	1 cut(s)	1370
BstBAI	YACGTR	1 cut(s)	196
BstDEI	CTNAG	4 cut(s)	89, 426, 947, 1923
BstDSI	CCRYGG	2 cut(s)	660, 1330
BstENI	CCTNNNNNAGG	1 cut(s)	248
BstF5I	GGATG	5 cut(s)	128, 206, 622, 1010, 1063
BstFNI	CGCG	1 cut(s)	1572
BstH2I	RGCGCY	1 cut(s)	153
BstHHI	GCGC	1 cut(s)	152
BstKTI	GATC	9 cut(s)	307, 312, 444, 742, 1014, 1093, 1246, 1285, 1666
BstMAI	GTCTC	4 cut(s)	29, 169, 1910, 2037
BstMBI	GATC	9 cut(s)	304, 309, 441, 739, 1011, 1090, 1243, 1282, 1663
BstMWI	GCNNNNNNNGC	4 cut(s)	149, 370, 641, 650
BstNI	CCWGG	1 cut(s)	245
BstNSI	RCATGY	2 cut(s)	182, 1796
BstSCI	CCNGG	4 cut(s)	209, 243, 976, 1217
BstSFI	CTRYAG	2 cut(s)	597, 1107
BstSLI	GKGCMC	3 cut(s)	189, 1263, 1806
BstSNI	TACGTA	1 cut(s)	196
BstUI	CGCG	1 cut(s)	1572
BstV1I	GCAGC	3 cut(s)	1157, 1918, 1934
BstV2I	GAAGAC	2 cut(s)	341, 1129
BstX2I	RGATCY	3 cut(s)	1011, 1090, 1663
BstXI	CCANNNNNNTGG	1 cut(s)	1005
BstYI	RGATCY	3 cut(s)	1011, 1090, 1663
Bsu15I	ATCGAT	1 cut(s)	480
BsuI	GTATCC	1 cut(s)	1804
BsuRI	GGCC	3 cut(s)	976, 1261, 1928
BsuTUI	ATCGAT	1 cut(s)	480
BtgI	CCRYGG	2 cut(s)	660, 1330
BtgZI	GCGATG	1 cut(s)	1587
BtsCI	GGATG	5 cut(s)	128, 206, 622, 1010, 1063
BtsI	GCAGTG	1 cut(s)	283
BtsIMutI	CAGTG	3 cut(s)	283, 1263, 1698
CfoI	GCGC	1 cut(s)	152
Cfr13I	GGNCC	6 cut(s)	770, 962, 1259, 1260, 1511, 1714
ClaI	ATCGAT	1 cut(s)	480
CseI	GACGC	1 cut(s)	379
Csp6I	GTAC	3 cut(s)	266, 1250, 1568
CviAII	CATG	8 cut(s)	179, 367, 562, 661, 923, 1465, 1504, 1793
CviQI	GTAC	3 cut(s)	266, 1250, 1568
DdeI	CTNAG	4 cut(s)	89, 426, 947, 1923
DpnI	GATC	9 cut(s)	306, 311, 443, 741, 1013, 1092, 1245, 1284, 1665
DpnII	GATC	9 cut(s)	304, 309, 441, 739, 1011, 1090, 1243, 1282, 1663
DraI	TTTAAA	3 cut(s)	471, 609, 1897
DraIII	CACNNNGTG	1 cut(s)	2100
EaeI	YGGCCR	1 cut(s)	974
Eam1104I	CTCTTC	3 cut(s)	243, 1176, 1724
EarI	CTCTTC	3 cut(s)	243, 1176, 1724
Eco105I	TACGTA	1 cut(s)	196
Eco130I	CCWWGG	2 cut(s)	536, 660
Eco147I	AGGCCT	1 cut(s)	1928
Eco24I	GRGCYC	2 cut(s)	1224, 1263
Eco47I	GGWCC	4 cut(s)	770, 962, 1511, 1714
Eco57I	CTGAAG	1 cut(s)	1108
Eco88I	CYCGRG	3 cut(s)	39, 762, 1256
EcoNI	CCTNNNNNAGG	1 cut(s)	248
EcoO109I	RGGNCCY	2 cut(s)	1511, 1714
EcoRII	CCWGG	1 cut(s)	243
EcoT14I	CCWWGG	2 cut(s)	536, 660
EcoT38I	GRGCYC	2 cut(s)	1224, 1263
ErhI	CCWWGG	2 cut(s)	536, 660
Esp3I	CGTCTC	1 cut(s)	1910
FaeI	CATG	8 cut(s)	182, 370, 565, 664, 926, 1468, 1507, 1796
FalI	AAGNNNNNCTT	2 cut(s)	2031, 2063
FaqI	GGGAC	2 cut(s)	686, 1524
FatI	CATG	8 cut(s)	178, 366, 561, 660, 922, 1464, 1503, 1792
FauNDI	CATATG	1 cut(s)	1165
FbaI	TGATCA	1 cut(s)	304
FblI	GTMKAC	1 cut(s)	198
Fnu4HI	GCNGC	4 cut(s)	1146, 1440, 1907, 1948
FokI	GGATG	5 cut(s)	115, 193, 629, 1017, 1070
FriOI	GRGCYC	2 cut(s)	1224, 1263
Fsp4HI	GCNGC	4 cut(s)	1146, 1440, 1907, 1948
FspBI	CTAG	9 cut(s)	9, 348, 387, 392, 656, 693, 801, 1683, 1748
GlaI	GCGC	1 cut(s)	151
GluI	GCNGC	4 cut(s)	1146, 1440, 1907, 1948
GsaI	CCCAGC	1 cut(s)	1511
GsuI	CTGGAG	2 cut(s)	840, 2019
HaeII	RGCGCY	1 cut(s)	153
HaeIII	GGCC	3 cut(s)	976, 1261, 1928
HapII	CCGG	3 cut(s)	210, 977, 1218
HgaI	GACGC	1 cut(s)	379
HhaI	GCGC	1 cut(s)	152
Hin1I	GRCGYC	1 cut(s)	371
Hin1II	CATG	8 cut(s)	182, 370, 565, 664, 926, 1468, 1507, 1796
Hin6I	GCGC	1 cut(s)	150
HinP1I	GCGC	1 cut(s)	150
HincII	GTYRAC	3 cut(s)	459, 795, 1161
HindII	GTYRAC	3 cut(s)	459, 795, 1161
HindIII	AAGCTT	1 cut(s)	1367
HinfI	GANTC	7 cut(s)	125, 583, 983, 1342, 1817, 1991, 2030
HpaI	GTTAAC	3 cut(s)	459, 795, 1161
HpaII	CCGG	3 cut(s)	210, 977, 1218
HphI	GGTGA	2 cut(s)	943, 1186
Hpy166II	GTNNAC	9 cut(s)	199, 266, 397, 459, 773, 795, 934, 1161, 1804
Hpy188I	TCNGA	7 cut(s)	29, 309, 626, 867, 1668, 1810, 1837
Hpy188III	TCNNGA	9 cut(s)	567, 743, 762, 764, 1202, 1339, 1661, 2036, 2078
Hpy8I	GTNNAC	9 cut(s)	199, 266, 397, 459, 773, 795, 934, 1161, 1804
HpyAV	CCTTC	7 cut(s)	84, 1048, 1201, 1525, 1598, 1639, 1783
HpyCH4III	ACNGT	6 cut(s)	558, 601, 884, 1267, 1706, 2074
HpyCH4IV	ACGT	1 cut(s)	195
HpyF10VI	GCNNNNNNNGC	4 cut(s)	149, 370, 641, 650
HpyF3I	CTNAG	4 cut(s)	89, 426, 947, 1923
HpySE526I	ACGT	1 cut(s)	195
Hsp92I	GRCGYC	1 cut(s)	371
Hsp92II	CATG	8 cut(s)	182, 370, 565, 664, 926, 1468, 1507, 1796
HspAI	GCGC	1 cut(s)	150
KflI	GGGWCCC	1 cut(s)	1511
Ksp22I	TGATCA	1 cut(s)	304
KspAI	GTTAAC	3 cut(s)	459, 795, 1161
Kzo9I	GATC	9 cut(s)	304, 309, 441, 739, 1011, 1090, 1243, 1282, 1663
LguI	GCTCTTC	1 cut(s)	1176
Lsp1109I	GCAGC	3 cut(s)	1157, 1918, 1934
LweI	GCATC	4 cut(s)	229, 583, 631, 899
MaeI	CTAG	9 cut(s)	9, 348, 387, 392, 656, 693, 801, 1683, 1748
MaeII	ACGT	1 cut(s)	195
MaeIII	GTNAC	6 cut(s)	564, 1081, 1114, 1267, 1597, 2068
MalI	GATC	9 cut(s)	306, 311, 443, 741, 1013, 1092, 1245, 1284, 1665
MboI	GATC	9 cut(s)	304, 309, 441, 739, 1011, 1090, 1243, 1282, 1663
MboII	GAAGA	9 cut(s)	260, 346, 1129, 1163, 1403, 1480, 1510, 1711, 2051
MflI	RGATCY	3 cut(s)	1011, 1090, 1663
MhlI	GDGCHC	4 cut(s)	189, 1224, 1263, 1806
MluCI	AATT	7 cut(s)	163, 234, 1321, 1360, 1395, 1610, 1860
MlyI	GAGTC	2 cut(s)	119, 2039
MnlI	CCTC	9 cut(s)	25, 208, 244, 421, 956, 1727, 1837, 1918, 1939
MroXI	GAANNNNTTC	1 cut(s)	1842
MslI	CAYNNNNRTG	1 cut(s)	1791
MspA1I	CMGCKG	1 cut(s)	1442
MspCI	CTTAAG	1 cut(s)	1370
MspI	CCGG	3 cut(s)	210, 977, 1218
MspR9I	CCNGG	4 cut(s)	211, 245, 978, 1219
MssI	GTTTAAAC	1 cut(s)	609
MvaI	CCWGG	1 cut(s)	245
MvnI	CGCG	1 cut(s)	1572
MwoI	GCNNNNNNNGC	4 cut(s)	149, 370, 641, 650
NciI	CCSGG	3 cut(s)	211, 978, 1219
NcoI	CCATGG	1 cut(s)	660
NdeI	CATATG	1 cut(s)	1165
NdeII	GATC	9 cut(s)	304, 309, 441, 739, 1011, 1090, 1243, 1282, 1663
NlaIII	CATG	8 cut(s)	182, 370, 565, 664, 926, 1468, 1507, 1796
NlaIV	GGNNCC	5 cut(s)	1210, 1261, 1512, 1513, 1715
NmuCI	GTSAC	3 cut(s)	564, 1114, 2068
NspI	RCATGY	2 cut(s)	182, 1796
PaeR7I	CTCGAG	2 cut(s)	39, 762
PceI	AGGCCT	1 cut(s)	1928
PciI	ACATGT	1 cut(s)	178
PciSI	GCTCTTC	1 cut(s)	1176
PdmI	GAANNNNTTC	1 cut(s)	1842
PfeI	GAWTC	5 cut(s)	583, 983, 1342, 1817, 1991
PflMI	CCANNNNNTGG	1 cut(s)	1022
PkrI	GCNGC	4 cut(s)	1147, 1441, 1908, 1949
PleI	GAGTC	2 cut(s)	119, 2038
PmeI	GTTTAAAC	1 cut(s)	609
PpsI	GAGTC	2 cut(s)	119, 2038
Ppu21I	YACGTR	1 cut(s)	196
PpuMI	RGGWCCY	2 cut(s)	1511, 1714
PscI	ACATGT	1 cut(s)	178
Psp5II	RGGWCCY	2 cut(s)	1511, 1714
Psp6I	CCWGG	1 cut(s)	243
PspFI	CCCAGC	1 cut(s)	1507
PspGI	CCWGG	1 cut(s)	243
PspN4I	GGNNCC	5 cut(s)	1210, 1261, 1512, 1513, 1715
PspOMI	GGGCCC	1 cut(s)	1259
PspPI	GGNCC	6 cut(s)	770, 962, 1259, 1260, 1511, 1714
PspPPI	RGGWCCY	2 cut(s)	1511, 1714
PspXI	VCTCGAGB	1 cut(s)	39
PsuI	RGATCY	3 cut(s)	1011, 1090, 1663
RsaI	GTAC	3 cut(s)	267, 1251, 1569
RsaNI	GTAC	3 cut(s)	266, 1250, 1568
RseI	CAYNNNNRTG	1 cut(s)	1791
SapI	GCTCTTC	1 cut(s)	1176
SatI	GCNGC	4 cut(s)	1146, 1440, 1907, 1948
Sau3AI	GATC	9 cut(s)	304, 309, 441, 739, 1011, 1090, 1243, 1282, 1663
Sau96I	GGNCC	6 cut(s)	770, 962, 1259, 1260, 1511, 1714
SchI	GAGTC	2 cut(s)	119, 2039
ScrFI	CCNGG	4 cut(s)	211, 245, 978, 1219
SduI	GDGCHC	4 cut(s)	189, 1224, 1263, 1806
SfaNI	GCATC	4 cut(s)	229, 583, 631, 899
SfcI	CTRYAG	2 cut(s)	597, 1107
Sfr274I	CTCGAG	2 cut(s)	39, 762
SinI	GGWCC	4 cut(s)	770, 962, 1511, 1714
SlaI	CTCGAG	2 cut(s)	39, 762
SmiMI	CAYNNNNRTG	1 cut(s)	1791
SmlI	CTYRAG	3 cut(s)	39, 762, 1370
SmoI	CTYRAG	3 cut(s)	39, 762, 1370
SnaBI	TACGTA	1 cut(s)	196
SpeI	ACTAGT	1 cut(s)	692
Sse9I	AATT	7 cut(s)	163, 234, 1321, 1360, 1395, 1610, 1860
SseBI	AGGCCT	1 cut(s)	1928
SsiI	CCGC	5 cut(s)	755, 917, 1431, 1440, 2021
SspI	AATATT	1 cut(s)	958
SspMI	CTAG	9 cut(s)	9, 348, 387, 392, 656, 693, 801, 1683, 1748
StuI	AGGCCT	1 cut(s)	1928
StyD4I	CCNGG	4 cut(s)	209, 243, 976, 1217
StyI	CCWWGG	2 cut(s)	536, 660
TaaI	ACNGT	6 cut(s)	558, 601, 884, 1267, 1706, 2074
TaiI	ACGT	1 cut(s)	198
TaqI	TCGA	8 cut(s)	40, 312, 480, 763, 1829, 1846, 1934, 2007
TasI	AATT	7 cut(s)	163, 234, 1321, 1360, 1395, 1610, 1860
TatI	WGTACW	1 cut(s)	1249
TauI	GCSGC	1 cut(s)	1442
TfiI	GAWTC	5 cut(s)	583, 983, 1342, 1817, 1991
TscAI	CASTG	3 cut(s)	283, 1270, 1705
TseFI	GTSAC	3 cut(s)	564, 1114, 2068
TseI	GCWGC	3 cut(s)	1145, 1906, 1947
Tsp45I	GTSAC	3 cut(s)	564, 1114, 2068
TspDTI	ATGAA	9 cut(s)	45, 195, 550, 1416, 1467, 1481, 1634, 1765, 1983
TspGWI	ACGGA	5 cut(s)	522, 593, 1319, 1616, 2088
TspRI	CASTG	3 cut(s)	283, 1270, 1705
Van91I	CCANNNNNTGG	1 cut(s)	1022
Vha464I	CTTAAG	1 cut(s)	1370
VneI	GTGCAC	1 cut(s)	1802
VpaK11BI	GGWCC	4 cut(s)	770, 962, 1511, 1714
XagI	CCTNNNNNAGG	1 cut(s)	248
XapI	RAATTY	2 cut(s)	163, 1860
XceI	RCATGY	2 cut(s)	182, 1796
XhoI	CTCGAG	2 cut(s)	39, 762
XmiI	GTMKAC	1 cut(s)	198
XmnI	GAANNNNTTC	1 cut(s)	1842
XspI	CTAG	9 cut(s)	9, 348, 387, 392, 656, 693, 801, 1683, 1748

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.