Rh6DG161100

Glutamate receptor

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
Physical Location & Seq
Forward (+)
24176300 .. 24181429
5130 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG161100.1

Sequence Viewer

Length: 1941 bp
ATGATTAATGCACAAAATACAACAATCCCAGTGAATGTTGGTGTTGTTCTTGACTTTGATTCAGGGGGCGGGAAGACTGCAAAGGTGTACTTGAGTTGCATAGAAATGGCCCTCTCAGATATTTATGCATCTCATCCTTACTTCAAGACGAGGATAGTATTGAACACAAGGAACTCCAAACAAACTGTTGTTGGTGCAGCTGCGGCAGCTCTGGATCTGATAAAGAATGCAGAAGTTCTAGCAATATTAGGGCCTGAAACATCAATGCAGGCGAGCTTCATTGTTAATTTGGGAGACGAAGCTCATGTGCCCATTTTATCATTTTCTGCATCAGCACCTTATCTTACTTCGCTCCGGAGCCCTTACTTTTTTAGAATTACTCAAACCGACTCATATCAAGTGAAAGCCATTAGTAGCATTGTTCAAAATTTTGGATGGAGACAAGTTGTACCAATCTACGTGGACAATATGTATGGGGAGGGAATGATACCTTTTCTCATTGATGCCTTGCAAGATGTTGATGCTCATGTCCCTTACCGTAGTGTCATTTCCCCAACAGCAACTGGTGACCAGATTATAAAAGAGCTTTACAAATTAATGACAATGCAAACTAGAGTCTTCATCGTGCATATGAAGTCCAATCTTTGCTCTAAGCTGTTTTCCAAGGCAAAAGAGATAGGAATGATGAGTAAAGGATATGTTTGGATCTTGACCAATGGGATTTCTAATCGTTTAAATTCGATGAATTCTTCAGCCATAGCTTCCATGGAAGGTGTGTTAGGTATCAAAACATTCATCCCGAGAACAACAGAACTTGAAAAATTCGAGCTCCGGTGGAAAGGGCAATTCCAACAAGACAACCCAACCATTATAGATGTTCAATTGGATGTTTATGCACTTCAGGCTTATGATGCTGCTTTTGCATTAGCCGTGTCAATTGAAAATGTTGGGATCAGTACAAGCTCTGAAATCCACAAGGATGCTTCCTTCAACTCAACTAACCTTGATACTTGTAAGGTCTCTGAAAATGGTCCTAAACTTGCTGAAGCATTATCAATTACTAGATTCAAAGGCATAGCTGGAGACTTCAAGCTTGTAGAAGGGCAACTTCAGTCATCAACTTTTACAATTGTTAATATAAAAGGTGAGGGAGGAAAACCAGTTGCATTTTGGACTCCGCAAAATCAAATGGTGAAAAAGTTGAATGACTCAACAAACACAAGCATCCTTTCAACTAATTCCAAGAGCAATCTTGGACCAATTAAATGGCCTGGAAATTCTCTCTGTGTTCCAAGGGGATGGGAGATACCAACAAATGGCAAGAAGTTGATAATAGGAGTTCCTGTCAAGATTGATTTTACTGAATTTGTTAAGATCTCGGAAGATCCAAAGACCGGCACAATGGATGTCACTGGGTTCTGTATTGATGTCTTTCATGCTGCATTGAAAGTACTACCTTATGCTCTTCCTTATGAGTTCGCTCCCTTCTCAAACCCTGATGGCACTAGCGCTGGCAATTATAATGACTTGGTCTATCAAGTATATCTTGGGAAGTTTGATGCCGTCGTTGGAGATACAACAATTAGAGCAAATAGGTCCTTGTACGTGGACTTTACAATGCCATACACAGAATCTGGTGTTGTAATGGTGGTGCCAATCATAGACACAACGAGCAAGAATGCATGGGTTTTCTTGAAGCCTTTGACTTGGGACCTGTGGCTTACAACTTTTTGTTTCTTCCTCTTTACTGGTTTTGTTGTTTGGGTTCTTGAACATCGAATTAATGAAGACTTTCGTGGTCCTCCTTCACATCAATTTGGGACTACTGTCTGGTTTTCCTTCTCAACTATGGTTTTCTCACAAAGTAATTATCTACCAACTCGCTTTTATTCATATTTATATATAACCTCTGTGCTAACTTTAATTAACAGATTTCATTAA

Protein Analysis

646

Amino Acids

71.78

Weight (kDa)

6.77

Isoelectric Point (pI)

25.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peripla_BP_6 PF13458 10 - 317 1e-17 Periplasmic binding protein
ANF_receptor PF01094 33 - 382 3.5e-82 Receptor family ligand binding region
Lig_chan-Glu_bd PF10613 461 - 551 7.1e-08 Ligated ion channel L-glutamate- and glycine-binding site
Lig_chan PF00060 569 - 642 1.8e-10 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 578, 1521
AccB1I GGYRCC 1 cut(s) 1651
AccB7I CCANNNNNTGG 1 cut(s) 1316
AccIII TCCGGA 1 cut(s) 354
AciI CCGC 3 cut(s) 69, 203, 1178
AclWI GGATC 4 cut(s) 222, 713, 959, 1379
AcsI RAATTY 6 cut(s) 427, 736, 745, 821, 1276, 1364
AcuI CTGAAG 4 cut(s) 735, 884, 1065, 1094
AfaI GTAC 5 cut(s) 89, 450, 958, 1452, 1604
AfeI AGCGCT 1 cut(s) 1510
AfiI CCNNNNNNNGG 2 cut(s) 1316, 1394
AjnI CCWGG 1 cut(s) 1270
Alw21I GWGCWC 1 cut(s) 831
Alw26I GTCTC 4 cut(s) 288, 433, 1024, 1077
AlwI GGATC 4 cut(s) 222, 713, 959, 1379
AlwNI CAGNNNCTG 2 cut(s) 563, 1634
Ama87I CYCGRG 1 cut(s) 799
Aor13HI TCCGGA 1 cut(s) 354
Aor51HI AGCGCT 1 cut(s) 1510
AoxI GGCC 3 cut(s) 108, 251, 1268
ApeKI GCWGC 5 cut(s) 197, 200, 206, 914, 1439
ApoI RAATTY 6 cut(s) 427, 736, 745, 821, 1276, 1364
AseI ATTAAT 3 cut(s) 6, 596, 1782
Asp700I GAANNNNTTC 1 cut(s) 1791
AspLEI GCGC 1 cut(s) 1511
AspS9I GGNCC 7 cut(s) 109, 251, 1031, 1256, 1596, 1711, 1799
AsuHPI GGTGA 3 cut(s) 578, 1157, 1204
AvaI CYCGRG 1 cut(s) 799
AvaII GGWCC 5 cut(s) 1031, 1256, 1596, 1711, 1799
BaeGI GKGCMC 1 cut(s) 312
BanI GGYRCC 1 cut(s) 1651
BanII GRGCYC 2 cut(s) 362, 831
BbsI GAAGAC 3 cut(s) 80, 610, 1794
Bbv12I GWGCWC 1 cut(s) 831
BbvI GCAGC 5 cut(s) 187, 209, 218, 901, 1426
BccI CCATC 3 cut(s) 429, 1293, 1493
BceAI ACGGC 2 cut(s) 914, 1547
BciT130I CCWGG 1 cut(s) 1272
BcoDI GTCTC 4 cut(s) 288, 433, 1024, 1077
BfaI CTAG 4 cut(s) 239, 612, 1062, 1506
BfoI RGCGCY 1 cut(s) 1512
BglII AGATCT 1 cut(s) 1374
BisI GCNGC 6 cut(s) 198, 201, 204, 207, 915, 1440
BlsI GCNGC 6 cut(s) 199, 202, 205, 208, 916, 1441
BmcAI AGTACT 1 cut(s) 1452
Bme1390I CCNGG 1 cut(s) 1272
Bme18I GGWCC 5 cut(s) 1031, 1256, 1596, 1711, 1799
BmeT110I CYCGRG 1 cut(s) 799
BmgT120I GGNCC 7 cut(s) 109, 251, 1031, 1256, 1596, 1711, 1799
BmiI GGNNCC 3 cut(s) 359, 1653, 1712
BmrFI CCNGG 1 cut(s) 1272
BmrI ACTGGG 2 cut(s) 23, 1422
BmsI GCATC 8 cut(s) 137, 338, 493, 511, 901, 970, 1233, 1549
BmuI ACTGGG 2 cut(s) 23, 1422
BoxI GACNNNNGTC 1 cut(s) 1826
BpiI GAAGAC 3 cut(s) 80, 610, 1794
BpmI CTGGAG 1 cut(s) 1101
BpuEI CTTGAG 1 cut(s) 112
BsaAI YACGTR 2 cut(s) 460, 1606
BsaI GGTCTC 1 cut(s) 1024
BsaJI CCNNGG 3 cut(s) 663, 765, 1292
BsaWI WCCGGW 2 cut(s) 354, 831
BsaXI ACNNNNNCTCC 2 cut(s) 1329, 1359
Bsc4I CCNNNNNNNGG 2 cut(s) 1316, 1394
Bse118I RCCGGY 1 cut(s) 1394
Bse1I ACTGG 5 cut(s) 29, 568, 1160, 1417, 1753
BseAI TCCGGA 1 cut(s) 354
BseBI CCWGG 1 cut(s) 1272
BseDI CCNNGG 3 cut(s) 663, 765, 1292
BseGI GGATG 8 cut(s) 133, 440, 795, 892, 985, 1224, 1304, 1411
BseLI CCNNNNNNNGG 2 cut(s) 1316, 1394
BseMII CTCAG 1 cut(s) 129
BseNI ACTGG 5 cut(s) 29, 568, 1160, 1417, 1753
BseSI GKGCMC 1 cut(s) 312
BseXI GCAGC 5 cut(s) 187, 209, 218, 901, 1426
BsgI GTGCAG 1 cut(s) 216
BshFI GGCC 3 cut(s) 110, 253, 1270
BshNI GGYRCC 1 cut(s) 1651
BsiHKAI GWGCWC 1 cut(s) 831
BsiHKCI CYCGRG 1 cut(s) 799
BsiSI CCGG 3 cut(s) 355, 832, 1395
BslFI GGGAC 3 cut(s) 515, 1724, 1834
BslI CCNNNNNNNGG 2 cut(s) 1316, 1394
BsmAI GTCTC 4 cut(s) 288, 433, 1024, 1077
BsmBI CGTCTC 1 cut(s) 288
BsmFI GGGAC 3 cut(s) 515, 1724, 1834
BsmI GAATGC 2 cut(s) 232, 1684
BsnI GGCC 3 cut(s) 110, 253, 1270
Bso31I GGTCTC 1 cut(s) 1024
BsoBI CYCGRG 1 cut(s) 799
Bsp1286I GDGCHC 3 cut(s) 312, 362, 831
Bsp13I TCCGGA 1 cut(s) 354
Bsp143I GATC 5 cut(s) 214, 705, 951, 1374, 1384
Bsp19I CCATGG 1 cut(s) 765
BspACI CCGC 3 cut(s) 69, 203, 1178
BspANI GGCC 3 cut(s) 110, 253, 1270
BspCNI CTCAG 1 cut(s) 128
BspEI TCCGGA 1 cut(s) 354
BspLI GGNNCC 3 cut(s) 359, 1653, 1712
BspPI GGATC 4 cut(s) 222, 713, 959, 1379
BspQI GCTCTTC 1 cut(s) 1470
BspT107I GGYRCC 1 cut(s) 1651
BspTNI GGTCTC 1 cut(s) 1024
BsrFI RCCGGY 1 cut(s) 1394
BsrI ACTGG 5 cut(s) 29, 568, 1160, 1417, 1753
BssAI RCCGGY 1 cut(s) 1394
BssECI CCNNGG 3 cut(s) 663, 765, 1292
BssMI GATC 5 cut(s) 214, 705, 951, 1374, 1384
BssT1I CCWWGG 3 cut(s) 663, 765, 1292
Bst2UI CCWGG 1 cut(s) 1272
Bst4CI ACNGT 3 cut(s) 187, 539, 1828
Bst6I CTCTTC 1 cut(s) 1470
BstBAI YACGTR 2 cut(s) 460, 1606
BstC8I GCNNGC 3 cut(s) 270, 274, 1513
BstDEI CTNAG 2 cut(s) 115, 651
BstDSI CCRYGG 1 cut(s) 765
BstEII GGTNACC 1 cut(s) 566
BstF5I GGATG 8 cut(s) 133, 440, 795, 892, 985, 1224, 1304, 1411
BstH2I RGCGCY 1 cut(s) 1512
BstHHI GCGC 1 cut(s) 1511
BstKTI GATC 5 cut(s) 217, 708, 954, 1377, 1387
BstMAI GTCTC 4 cut(s) 288, 433, 1024, 1077
BstMBI GATC 5 cut(s) 214, 705, 951, 1374, 1384
BstMWI GCNNNNNNNGC 5 cut(s) 203, 206, 902, 911, 920
BstNI CCWGG 1 cut(s) 1272
BstPAI GACNNNNGTC 1 cut(s) 1826
BstPI GGTNACC 1 cut(s) 566
BstSCI CCNGG 1 cut(s) 1270
BstSLI GKGCMC 1 cut(s) 312
BstV1I GCAGC 5 cut(s) 187, 209, 218, 901, 1426
BstV2I GAAGAC 3 cut(s) 80, 610, 1794
BstX2I RGATCY 4 cut(s) 214, 705, 1374, 1384
BstXI CCANNNNNNTGG 2 cut(s) 1266, 1299
BstYI RGATCY 4 cut(s) 214, 705, 1374, 1384
BsuRI GGCC 3 cut(s) 110, 253, 1270
BtgI CCRYGG 1 cut(s) 765
BtsCI GGATG 8 cut(s) 133, 440, 795, 892, 985, 1224, 1304, 1411
BtsIMutI CAGTG 2 cut(s) 36, 1410
Cac8I GCNNGC 3 cut(s) 270, 274, 1513
CaiI CAGNNNCTG 2 cut(s) 563, 1634
CfoI GCGC 1 cut(s) 1511
Cfr10I RCCGGY 1 cut(s) 1394
Cfr13I GGNCC 7 cut(s) 109, 251, 1031, 1256, 1596, 1711, 1799
Csp6I GTAC 5 cut(s) 88, 449, 957, 1451, 1603
CspCI CAANNNNNGTGG 2 cut(s) 441, 476
CviAII CATG 5 cut(s) 305, 527, 766, 1436, 1683
CviQI GTAC 5 cut(s) 88, 449, 957, 1451, 1603
DdeI CTNAG 2 cut(s) 115, 651
DpnI GATC 5 cut(s) 216, 707, 953, 1376, 1386
DpnII GATC 5 cut(s) 214, 705, 951, 1374, 1384
DraI TTTAAA 1 cut(s) 735
Eam1104I CTCTTC 1 cut(s) 1470
EarI CTCTTC 1 cut(s) 1470
Ecl136II GAGCTC 1 cut(s) 829
Eco130I CCWWGG 3 cut(s) 663, 765, 1292
Eco24I GRGCYC 2 cut(s) 362, 831
Eco31I GGTCTC 1 cut(s) 1024
Eco47I GGWCC 5 cut(s) 1031, 1256, 1596, 1711, 1799
Eco47III AGCGCT 1 cut(s) 1510
Eco53kI GAGCTC 1 cut(s) 829
Eco57I CTGAAG 4 cut(s) 735, 884, 1065, 1094
Eco88I CYCGRG 1 cut(s) 799
Eco91I GGTNACC 1 cut(s) 566
EcoICRI GAGCTC 1 cut(s) 829
EcoO109I RGGNCCY 3 cut(s) 251, 1596, 1711
EcoO65I GGTNACC 1 cut(s) 566
EcoRI GAATTC 1 cut(s) 745
EcoRII CCWGG 1 cut(s) 1270
EcoT14I CCWWGG 3 cut(s) 663, 765, 1292
EcoT22I ATGCAT 2 cut(s) 130, 1684
EcoT38I GRGCYC 2 cut(s) 362, 831
ErhI CCWWGG 3 cut(s) 663, 765, 1292
Esp3I CGTCTC 1 cut(s) 288
FaeI CATG 5 cut(s) 308, 530, 769, 1439, 1686
FalI AAGNNNNNCTT 6 cut(s) 74, 106, 1092, 1124, 1530, 1562
FaqI GGGAC 3 cut(s) 515, 1724, 1834
FatI CATG 5 cut(s) 304, 526, 765, 1435, 1682
FauI CCCGC 1 cut(s) 62
FauNDI CATATG 1 cut(s) 630
Fnu4HI GCNGC 6 cut(s) 198, 201, 204, 207, 915, 1440
FokI GGATG 8 cut(s) 120, 447, 782, 899, 992, 1211, 1311, 1418
FriOI GRGCYC 2 cut(s) 362, 831
Fsp4HI GCNGC 6 cut(s) 198, 201, 204, 207, 915, 1440
FspBI CTAG 4 cut(s) 239, 612, 1062, 1506
GlaI GCGC 1 cut(s) 1510
GluI GCNGC 6 cut(s) 198, 201, 204, 207, 915, 1440
GsuI CTGGAG 1 cut(s) 1101
HaeII RGCGCY 1 cut(s) 1512
HaeIII GGCC 3 cut(s) 110, 253, 1270
HapII CCGG 3 cut(s) 355, 832, 1395
HhaI GCGC 1 cut(s) 1511
Hin1II CATG 5 cut(s) 308, 530, 769, 1439, 1686
Hin6I GCGC 1 cut(s) 1509
HinP1I GCGC 1 cut(s) 1509
HindIII AAGCTT 1 cut(s) 1091
HinfI GANTC 7 cut(s) 59, 389, 615, 1065, 1174, 1208, 1631
HpaII CCGG 3 cut(s) 355, 832, 1395
HphI GGTGA 3 cut(s) 578, 1157, 1204
Hpy166II GTNNAC 3 cut(s) 88, 463, 1609
Hpy188I TCNGA 5 cut(s) 118, 219, 967, 1024, 1381
Hpy188III TCNNGA 9 cut(s) 50, 145, 212, 355, 709, 799, 1348, 1693, 1769
Hpy8I GTNNAC 3 cut(s) 88, 463, 1609
Hpy99I CGWCG 1 cut(s) 1568
HpyAV CCTTC 6 cut(s) 764, 997, 1094, 1495, 1815, 1849
HpyCH4III ACNGT 3 cut(s) 187, 539, 1828
HpyCH4IV ACGT 2 cut(s) 459, 1605
HpyF10VI GCNNNNNNNGC 5 cut(s) 203, 206, 902, 911, 920
HpyF3I CTNAG 2 cut(s) 115, 651
HpySE526I ACGT 2 cut(s) 459, 1605
Hsp92II CATG 5 cut(s) 308, 530, 769, 1439, 1686
HspAI GCGC 1 cut(s) 1509
Kpn2I TCCGGA 1 cut(s) 354
Kzo9I GATC 5 cut(s) 214, 705, 951, 1374, 1384
LguI GCTCTTC 1 cut(s) 1470
LmnI GCTCC 4 cut(s) 357, 357, 834, 1486
Lsp1109I GCAGC 5 cut(s) 187, 209, 218, 901, 1426
LweI GCATC 8 cut(s) 137, 338, 493, 511, 901, 970, 1233, 1549
MaeI CTAG 4 cut(s) 239, 612, 1062, 1506
MaeII ACGT 2 cut(s) 459, 1605
MaeIII GTNAC 2 cut(s) 566, 1408
MalI GATC 5 cut(s) 216, 707, 953, 1376, 1386
MboI GATC 5 cut(s) 214, 705, 951, 1374, 1384
MboII GAAGA 7 cut(s) 85, 610, 741, 1394, 1457, 1729, 1799
MfeI CAATTG 3 cut(s) 881, 936, 1128
MflI RGATCY 4 cut(s) 214, 705, 1374, 1384
MhlI GDGCHC 3 cut(s) 312, 362, 831
MlyI GAGTC 4 cut(s) 383, 624, 1168, 1202
MmeI TCCRAC 2 cut(s) 874, 1549
MnlI CCTC 8 cut(s) 122, 144, 472, 1141, 1145, 1751, 1812, 1918
Mph1103I ATGCAT 2 cut(s) 130, 1684
MroI TCCGGA 1 cut(s) 354
MroXI GAANNNNTTC 1 cut(s) 1791
MslI CAYNNNNRTG 2 cut(s) 104, 978
MspA1I CMGCKG 1 cut(s) 200
MspI CCGG 3 cut(s) 355, 832, 1395
MspR9I CCNGG 1 cut(s) 1272
MunI CAATTG 3 cut(s) 881, 936, 1128
Mva1269I GAATGC 2 cut(s) 232, 1684
MvaI CCWGG 1 cut(s) 1272
MwoI GCNNNNNNNGC 5 cut(s) 203, 206, 902, 911, 920
NcoI CCATGG 1 cut(s) 765
NdeI CATATG 1 cut(s) 630
NdeII GATC 5 cut(s) 214, 705, 951, 1374, 1384
NlaIII CATG 5 cut(s) 308, 530, 769, 1439, 1686
NlaIV GGNNCC 3 cut(s) 359, 1653, 1712
NmuCI GTSAC 2 cut(s) 566, 1408
NsiI ATGCAT 2 cut(s) 130, 1684
PacI TTAATTAA 1 cut(s) 1926
PciSI GCTCTTC 1 cut(s) 1470
PctI GAATGC 2 cut(s) 232, 1684
PdmI GAANNNNTTC 1 cut(s) 1791
PfeI GAWTC 3 cut(s) 59, 1065, 1631
PflFI GACNNNGTC 1 cut(s) 1529
PflMI CCANNNNNTGG 1 cut(s) 1316
PkrI GCNGC 6 cut(s) 199, 202, 205, 208, 916, 1441
PleI GAGTC 4 cut(s) 383, 623, 1168, 1202
PpsI GAGTC 4 cut(s) 383, 623, 1168, 1202
Ppu21I YACGTR 2 cut(s) 460, 1606
PpuMI RGGWCCY 2 cut(s) 1596, 1711
PshAI GACNNNNGTC 1 cut(s) 1826
PshBI ATTAAT 3 cut(s) 6, 596, 1782
PsiI TTATAA 2 cut(s) 578, 1521
Psp124BI GAGCTC 1 cut(s) 831
Psp5II RGGWCCY 2 cut(s) 1596, 1711
Psp6I CCWGG 1 cut(s) 1270
PspEI GGTNACC 1 cut(s) 566
PspGI CCWGG 1 cut(s) 1270
PspN4I GGNNCC 3 cut(s) 359, 1653, 1712
PspPI GGNCC 7 cut(s) 109, 251, 1031, 1256, 1596, 1711, 1799
PspPPI RGGWCCY 2 cut(s) 1596, 1711
PstNI CAGNNNCTG 2 cut(s) 563, 1634
PsuI RGATCY 4 cut(s) 214, 705, 1374, 1384
PsyI GACNNNGTC 1 cut(s) 1529
PvuII CAGCTG 1 cut(s) 200
RsaI GTAC 5 cut(s) 89, 450, 958, 1452, 1604
RsaNI GTAC 5 cut(s) 88, 449, 957, 1451, 1603
RseI CAYNNNNRTG 2 cut(s) 104, 978
SacI GAGCTC 1 cut(s) 831
SapI GCTCTTC 1 cut(s) 1470
SatI GCNGC 6 cut(s) 198, 201, 204, 207, 915, 1440
Sau3AI GATC 5 cut(s) 214, 705, 951, 1374, 1384
Sau96I GGNCC 7 cut(s) 109, 251, 1031, 1256, 1596, 1711, 1799
ScaI AGTACT 1 cut(s) 1452
SchI GAGTC 4 cut(s) 383, 624, 1168, 1202
ScrFI CCNGG 1 cut(s) 1272
SduI GDGCHC 3 cut(s) 312, 362, 831
SfaNI GCATC 8 cut(s) 137, 338, 493, 511, 901, 970, 1233, 1549
SinI GGWCC 5 cut(s) 1031, 1256, 1596, 1711, 1799
SmiMI CAYNNNNRTG 2 cut(s) 104, 978
SmlI CTYRAG 1 cut(s) 91
SmoI CTYRAG 1 cut(s) 91
SsiI CCGC 3 cut(s) 69, 203, 1178
SspI AATATT 1 cut(s) 246
SspMI CTAG 4 cut(s) 239, 612, 1062, 1506
SstI GAGCTC 1 cut(s) 831
StyD4I CCNGG 1 cut(s) 1270
StyI CCWWGG 3 cut(s) 663, 765, 1292
TaaI ACNGT 3 cut(s) 187, 539, 1828
TaiI ACGT 2 cut(s) 462, 1608
TaqI TCGA 3 cut(s) 740, 825, 1777
TatI WGTACW 3 cut(s) 87, 956, 1450
TauI GCSGC 1 cut(s) 206
TfiI GAWTC 3 cut(s) 59, 1065, 1631
TscAI CASTG 2 cut(s) 36, 1417
TseFI GTSAC 2 cut(s) 566, 1408
TseI GCWGC 5 cut(s) 197, 200, 206, 914, 1439
Tsp45I GTSAC 2 cut(s) 566, 1408
TspDTI ATGAA 9 cut(s) 268, 610, 647, 758, 784, 1424, 1800, 1881, 1925
TspRI CASTG 2 cut(s) 36, 1417
Tth111I GACNNNGTC 1 cut(s) 1529
Van91I CCANNNNNTGG 1 cut(s) 1316
VpaK11BI GGWCC 5 cut(s) 1031, 1256, 1596, 1711, 1799
VspI ATTAAT 3 cut(s) 6, 596, 1782
XapI RAATTY 6 cut(s) 427, 736, 745, 821, 1276, 1364
XcmI CCANNNNNNNNNTGG 2 cut(s) 763, 1167
XmnI GAANNNNTTC 1 cut(s) 1791
XspI CTAG 4 cut(s) 239, 612, 1062, 1506
ZrmI AGTACT 1 cut(s) 1452
Zsp2I ATGCAT 2 cut(s) 130, 1684
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.