RchiOBHm_Chr6g0269951

Glutamate receptor

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Forward (+)
27539943 .. 27543530
3588 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ24216

Sequence Viewer

Length: 2880 bp
ATGATCAACAAAGCTAAGTACCCTTCCAGCCTTGAAAATAAGCTTGCTCTGAGTTTTATGTTTTTTTTGTTTCTTTCATCATCGATTACCTTGGCTATGCCACAAAGCAAAACCATCATCCCAGTAAATGTGGGAGTTGTTTTGGATGACCATATACATTCACGGGCTCAAAAAATTTGGTTGAGCTGCATAAAAATGGCTCTCTTTGACTTCTATGCGTCTAATGCTCATTACAAGAGTAGGGTGGTCTTGAAAGTTAGGGACTCCAAACGAAATGTTGTTCATGCAGCTGCCGCAGCTCTTGATTTGATAAAGAATGAAAAAGTTCGAGCCATCATTGGACCAGTGACGACAATGGAGACGAGCTTCGTTATTAATCTTGGAAACGAAGCTCATGTGCCCATCATATCATTTTCTTCAACAAGCCCTTCACTTACTTCGATCCGGAGCTCCTACTTTTTCCAATTTGCACAAAATGACTCAATCCAAGTGGAAGTTATAAGTTCCATTGTAAAAGCTTTTGGGTGGAGACAAGTTGTGCCGATCTACATAGACACTGCATACGGCGAGGCAATCATACCATACTTAACTGATGCCTTGGATGAGGTTGGGGCCCGGGTTCCCTACCGTAGTGTCATTTCCCCATCCGCAACTGATGATCAAATTGAAAAAGAGCTTTACAAGTTGATGACAATGCAAACTAGAGTTTTTCTTGTCCACATGACAACCTCACTATGCTCTAGGGTACTTTACAAGGCAAAAGCAATTGGAATGATGAGCGAGGGATATGTTTGGATCATGACCAGTGGGATAACTAATAGATTAAGGATGACGGACGACTTTTCATTCCTCAATTCCTTGGACGGAATATTAGGTGTTCAAACCTATGTCCCAAAAACAAAAGAACTTCATCAAGAGTTCATACCACGGTGGCATCTGCAGTTCCTAAAAGACACTCCAGCTAACAGTTTTTCTGCTAACTTGGATGTTTTTGCACTATGGGCTTATGATGCTGCTCATGCACTGGCCATAGCAATTGAAGAAGTAACTTGGAGTACAAGTAACATTGATTTCCAAAAGTCACATACTGCTCCCAACAACTCGACAGATCTTGAAAGTTTGGCGGTCTCTCAATATGGGCCAAAACTATGCAAAGCACTCTCAACTACTAGATTTAATGGCATTGCTGGAGATTTTAGACTTGTTGATAGGCAACTTCAATCCTCAACTTTTCAGATTGTTAACATAAATGGTGGTGCAACAAGAACAATCGGATTTTGGACACCAGAAAATGGACTATGTAAAAAGTTGGGATCCTCAGTAAACACAGGAAAAGGTTCAATTTCCAATGGCAATCTGGGACCCATTATATGGCCAGGAGATTCTCTTTCTGTTCCCAAGGGATGGGAGATACCAACAAATGGCAAGAAGTTGAGAATTGCAGTTCCTCAGAAAGTTGGTTTTACTGAGTTCGTTAAGATCACAAAAGATCCAAGCACAAACATAACAGATGTCTCTGGGTTCAGTATTGATGTCTTTGAGGCTGCGCTGGAGATATTGCCATATGCTCTTCCCTATGAATTTATTCCCTTTGCAAAGCCCGATGGCACCACTGCTGGCAATAACAATGATTTGTGCTATCAAGTTTCTATTGGGAACTTTGATGCTATAGTGGGAGATACAACAATTACAGCAAATAGGTCCTTGTTTGTAGACTTTACCATGCCATATACAGAAGCTGGTATAGTCATGGTTGTACCGGTCAGAGATAGCAATAGAAAGAGTGCATGGGCTTTCTTGAAGCCTTGGAGATGGGACCTGTGGTTTACAACTGCTTGTTTCTTCCTCTTCATTGGTTTCGTTGTTTGGGTTCTTGAACACCGAATTAATAAACACTTTCGGGGCCCTCCTTCACATCAAGTTGGTACCAGTATTTGGTTTTCTTTCTCCACCATGGTTTTTGCACAGACTGCAAGAGTTGTTAGCAACTGGGCTAGAGTTGTGATGATTATCTGGATATTTGTTCTACTAGTACTGACAATAAATTACACGGCCAGTCTAACTTCACTATATACCGTCCAGAAACTCCAGCCAACCGTTACTGATATAAAGGATCTATTAAAGAAAGGGGAGAAAGTTGGTCATGTAAGGAATTATGTTCGTGACATGTTGAAGCAAAAAGGTTTTGATGATTCAAAGCTTAAGCGTTTTACAACTGTGGAAGAAATTGATGACGCGCTTTCAAAAGGGAGTGCAAATGGTGGAGTGGCTGGTGTTATTGATGAAACTCCCAACCTGAAGCTTTTTCTTGCAAAGTATTGCAACAAATATACCATGGTTGGACCCTTCTTTAGAACTGATGGTTTTGCCTTTGCGTTTCCAAAAGGTTCCCCTTTTCTACAAGATGTTTCACAGGCAGTCCTAAACGTGACCGGGGGAGACAAGATAATGAAAATTGAAAATAAATGGTTCAAGAAAGAAAGCAGCTGTCAAGACTTGACTAACCCAAACATTAATAGCAATGGTCTTGGTGTTGATAGCTTTTGGGTCTTATTTCTCATTGTGGCGGGGGCTTCAATACTAGCTCTGATAATATTTGTAGTTTCGTTTATTTACAGGCATAAGGTTATCTGGAGTTCAGAAGCCTCTATTTGGTGTAGGATTCAAAAAATGTTGACTATCTTCAATGAAAAAGACCTGAGCTATCATACTTTTAATATCAATGAAAAGGAAGATGAAGTGACTCATGCCTTACCTAACTCCTCCCCAGAAAGTTCTGTGCACCAGAATTTGAACCAGGGAAATTCAAATTCTGTATTTTCTGGTTCTGGAGAGCAACAAGCAGCAAGGGTCTCCATGAGTAGCTGCTGCAACTCTTGA

Protein Analysis

959

Amino Acids

106.88

Weight (kDa)

8.73

Isoelectric Point (pI)

33.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peripla_BP_6 PF13458 60 - 406 1.6e-20 Periplasmic binding protein
ANF_receptor PF01094 61 - 418 1.7e-76 Receptor family ligand binding region
Lig_chan-Glu_bd PF10613 496 - 587 2.4e-06 Ligated ion channel L-glutamate- and glycine-binding site
SBP_bac_3 PF00497 505 - 825 3.7e-09 Bacterial extracellular solute-binding proteins, family 3
Lig_chan PF00060 605 - 858 9.2e-35 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 500
Acc65I GGTACC 1 cut(s) 1925
AccB1I GGYRCC 2 cut(s) 1607, 1925
AccB7I CCANNNNNTGG 5 cut(s) 1292, 1371, 1404, 1421, 1935
AccI GTMKAC 1 cut(s) 1713
AccII CGCG 1 cut(s) 2237
AccIII TCCGGA 1 cut(s) 444
AciI CCGC 4 cut(s) 294, 648, 1124, 2567
AclWI GGATC 6 cut(s) 436, 803, 1308, 1321, 1484, 2121
AcoI YGGCCR 3 cut(s) 1026, 1373, 2052
AcsI RAATTY 5 cut(s) 174, 1580, 2788, 2803, 2809
AcuI CTGAAG 1 cut(s) 2318
AfaI GTAC 6 cut(s) 20, 747, 1057, 1758, 1927, 2034
AfiI CCNNNNNNNGG 6 cut(s) 1292, 1371, 1404, 1421, 1935, 2652
AflII CTTAAG 1 cut(s) 2201
AflIII ACRYGT 1 cut(s) 2166
AgeI ACCGGT 1 cut(s) 1759
AhlI ACTAGT 1 cut(s) 2029
AjnI CCWGG 2 cut(s) 1375, 2796
Alw21I GWGCWC 2 cut(s) 452, 2784
Alw26I GTCTC 6 cut(s) 353, 523, 1132, 1519, 2433, 2857
Alw44I GTGCAC 1 cut(s) 2780
AlwI GGATC 6 cut(s) 436, 803, 1308, 1321, 1484, 2121
AlwNI CAGNNNCTG 1 cut(s) 1739
Ama87I CYCGRG 1 cut(s) 615
Aor13HI TCCGGA 1 cut(s) 444
AoxI GGCC 6 cut(s) 612, 1026, 1139, 1373, 1903, 2052
ApaI GGGCCC 2 cut(s) 616, 1907
ApaLI GTGCAC 1 cut(s) 2780
ApoI RAATTY 5 cut(s) 174, 1580, 2788, 2803, 2809
AseI ATTAAT 3 cut(s) 375, 1887, 2514
AsiGI ACCGGT 1 cut(s) 1759
Asp700I GAANNNNTTC 3 cut(s) 324, 1336, 1584
Asp718I GGTACC 1 cut(s) 1925
AspLEI GCGC 2 cut(s) 1549, 2239
AsuC2I CCSGG 3 cut(s) 616, 617, 2434
AvaI CYCGRG 1 cut(s) 615
AvaII GGWCC 5 cut(s) 341, 1361, 1701, 1816, 2342
BaeGI GKGCMC 4 cut(s) 402, 616, 1907, 2784
BalI TGGCCA 2 cut(s) 1028, 1375
BamHI GGATCC 1 cut(s) 1313
BanI GGYRCC 2 cut(s) 1607, 1925
BanII GRGCYC 4 cut(s) 169, 452, 616, 1907
Bbv12I GWGCWC 2 cut(s) 452, 2784
BccI CCATC 8 cut(s) 122, 341, 410, 652, 1398, 1598, 1806, 2354
BceAI ACGGC 2 cut(s) 580, 2067
BciT130I CCWGG 2 cut(s) 1377, 2798
BclI TGATCA 2 cut(s) 3, 658
BcnI CCSGG 3 cut(s) 616, 617, 2434
BcoDI GTCTC 6 cut(s) 353, 523, 1132, 1519, 2433, 2857
BcuI ACTAGT 1 cut(s) 2029
BfaI CTAG 6 cut(s) 702, 741, 1170, 1995, 2030, 2582
BfmI CTRYAG 2 cut(s) 938, 1668
BfrI CTTAAG 1 cut(s) 2201
BglII AGATCT 1 cut(s) 1108
BmcAI AGTACT 1 cut(s) 2034
Bme1390I CCNGG 5 cut(s) 616, 617, 1377, 2434, 2798
Bme18I GGWCC 5 cut(s) 341, 1361, 1701, 1816, 2342
BmeT110I CYCGRG 1 cut(s) 615
BmrFI CCNGG 5 cut(s) 616, 617, 1377, 2434, 2798
BmrI ACTGGG 2 cut(s) 116, 1999
BmsI GCATC 4 cut(s) 583, 943, 1000, 1654
BmuI ACTGGG 2 cut(s) 116, 1999
BpmI CTGGAG 6 cut(s) 942, 1209, 1571, 2072, 2653, 2850
Bpu10I CCTNAGC 1 cut(s) 2699
BpuMI CCSGG 3 cut(s) 616, 617, 2434
Bsa29I ATCGAT 1 cut(s) 83
BsaBI GATNNNNATC 1 cut(s) 2009
BsaI GGTCTC 2 cut(s) 1132, 2857
BsaWI WCCGGW 2 cut(s) 444, 1759
BsaXI ACNNNNNCTCC 2 cut(s) 1045, 1075
Bsc4I CCNNNNNNNGG 6 cut(s) 1292, 1371, 1404, 1421, 1935, 2652
Bse118I RCCGGY 1 cut(s) 1759
Bse1I ACTGG 7 cut(s) 122, 344, 804, 1029, 1929, 1994, 2055
Bse3DI GCAATG 2 cut(s) 1182, 2527
Bse8I GATNNNNATC 1 cut(s) 2009
BseAI TCCGGA 1 cut(s) 444
BseBI CCWGG 2 cut(s) 1377, 2798
BseCI ATCGAT 1 cut(s) 83
BseGI GGATG 7 cut(s) 117, 151, 607, 644, 834, 991, 1409
BseJI GATNNNNATC 1 cut(s) 2009
BseLI CCNNNNNNNGG 6 cut(s) 1292, 1371, 1404, 1421, 1935, 2652
BseMI GCAATG 2 cut(s) 1182, 2527
BseMII CTCAG 5 cut(s) 41, 1332, 1458, 1463, 2690
BseNI ACTGG 7 cut(s) 122, 344, 804, 1029, 1929, 1994, 2055
BseRI GAGGAG 1 cut(s) 2752
BseSI GKGCMC 4 cut(s) 402, 616, 1907, 2784
Bsh1236I CGCG 1 cut(s) 2237
BshFI GGCC 6 cut(s) 614, 1028, 1141, 1375, 1905, 2054
BshNI GGYRCC 2 cut(s) 1607, 1925
BshTI ACCGGT 1 cut(s) 1759
BshVI ATCGAT 1 cut(s) 83
BsiHKAI GWGCWC 2 cut(s) 452, 2784
BsiHKCI CYCGRG 1 cut(s) 615
BsiSI CCGG 4 cut(s) 445, 616, 1760, 2433
BslFI GGGAC 4 cut(s) 275, 875, 1374, 1829
BslI CCNNNNNNNGG 6 cut(s) 1292, 1371, 1404, 1421, 1935, 2652
BsmAI GTCTC 6 cut(s) 353, 523, 1132, 1519, 2433, 2857
BsmBI CGTCTC 1 cut(s) 353
BsmFI GGGAC 4 cut(s) 275, 875, 1374, 1829
BsnI GGCC 6 cut(s) 614, 1028, 1141, 1375, 1905, 2054
Bso31I GGTCTC 2 cut(s) 1132, 2857
BsoBI CYCGRG 1 cut(s) 615
Bsp120I GGGCCC 2 cut(s) 612, 1903
Bsp1286I GDGCHC 6 cut(s) 169, 402, 452, 616, 1907, 2784
Bsp13I TCCGGA 1 cut(s) 444
Bsp19I CCATGG 2 cut(s) 1953, 2334
BspACI CCGC 4 cut(s) 294, 648, 1124, 2567
BspANI GGCC 6 cut(s) 614, 1028, 1141, 1375, 1905, 2054
BspCNI CTCAG 5 cut(s) 42, 1331, 1459, 1462, 2691
BspDI ATCGAT 1 cut(s) 83
BspEI TCCGGA 1 cut(s) 444
BspFNI CGCG 1 cut(s) 2237
BspHI TCATGA 1 cut(s) 798
BspMAI CTGCAG 1 cut(s) 942
BspPI GGATC 6 cut(s) 436, 803, 1308, 1321, 1484, 2121
BspQI GCTCTTC 1 cut(s) 1575
BspT107I GGYRCC 2 cut(s) 1607, 1925
BspTI CTTAAG 1 cut(s) 2201
BspTNI GGTCTC 2 cut(s) 1132, 2857
BsrDI GCAATG 2 cut(s) 1182, 2527
BsrFI RCCGGY 1 cut(s) 1759
BsrI ACTGG 7 cut(s) 122, 344, 804, 1029, 1929, 1994, 2055
BssAI RCCGGY 1 cut(s) 1759
BssT1I CCWWGG 7 cut(s) 90, 597, 858, 1398, 1805, 1953, 2334
Bst2UI CCWGG 2 cut(s) 1377, 2798
Bst4CI ACNGT 6 cut(s) 629, 930, 968, 2077, 2098, 2218
Bst6I CTCTTC 2 cut(s) 1575, 1853
BstAFI CTTAAG 1 cut(s) 2201
BstAPI GCANNNNNTGC 1 cut(s) 1970
BstC8I GCNNGC 2 cut(s) 45, 1618
BstDEI CTNAG 6 cut(s) 15, 50, 1318, 1449, 1467, 2699
BstDSI CCRYGG 3 cut(s) 926, 1953, 2334
BstF5I GGATG 7 cut(s) 117, 151, 607, 644, 834, 991, 1409
BstFNI CGCG 1 cut(s) 2237
BstHHI GCGC 2 cut(s) 1549, 2239
BstMAI GTCTC 6 cut(s) 353, 523, 1132, 1519, 2433, 2857
BstMWI GCNNNNNNNGC 7 cut(s) 224, 293, 296, 1001, 1010, 1019, 1970
BstNI CCWGG 2 cut(s) 1377, 2798
BstNSI RCATGY 1 cut(s) 2170
BstSCI CCNGG 5 cut(s) 614, 615, 1375, 2432, 2796
BstSFI CTRYAG 2 cut(s) 938, 1668
BstSLI GKGCMC 4 cut(s) 402, 616, 1907, 2784
BstUI CGCG 1 cut(s) 2237
BstX2I RGATCY 4 cut(s) 1108, 1313, 1489, 2113
BstYI RGATCY 4 cut(s) 1108, 1313, 1489, 2113
Bsu15I ATCGAT 1 cut(s) 83
BsuRI GGCC 6 cut(s) 614, 1028, 1141, 1375, 1905, 2054
BsuTUI ATCGAT 1 cut(s) 83
BtgI CCRYGG 3 cut(s) 926, 1953, 2334
BtsCI GGATG 7 cut(s) 117, 151, 607, 644, 834, 991, 1409
BtsI GCAGTG 2 cut(s) 555, 1611
BtsIMutI CAGTG 5 cut(s) 351, 555, 811, 1022, 1611
Cac8I GCNNGC 2 cut(s) 45, 1618
CaiI CAGNNNCTG 1 cut(s) 1739
CciI TCATGA 1 cut(s) 798
CfoI GCGC 2 cut(s) 1549, 2239
Cfr10I RCCGGY 1 cut(s) 1759
Cfr9I CCCGGG 1 cut(s) 615
ClaI ATCGAT 1 cut(s) 83
CseI GACGC 2 cut(s) 207, 2243
Csp6I GTAC 6 cut(s) 19, 746, 1056, 1757, 1926, 2033
CspAI ACCGGT 1 cut(s) 1759
CspCI CAANNNNNGTGG 2 cut(s) 471, 506
CviQI GTAC 6 cut(s) 19, 746, 1056, 1757, 1926, 2033
DdeI CTNAG 6 cut(s) 15, 50, 1318, 1449, 1467, 2699
EaeI YGGCCR 3 cut(s) 1026, 1373, 2052
Eam1104I CTCTTC 2 cut(s) 1575, 1853
EarI CTCTTC 2 cut(s) 1575, 1853
Ecl136II GAGCTC 1 cut(s) 450
Eco130I CCWWGG 7 cut(s) 90, 597, 858, 1398, 1805, 1953, 2334
Eco24I GRGCYC 4 cut(s) 169, 452, 616, 1907
Eco31I GGTCTC 2 cut(s) 1132, 2857
Eco47I GGWCC 5 cut(s) 341, 1361, 1701, 1816, 2342
Eco53kI GAGCTC 1 cut(s) 450
Eco57I CTGAAG 1 cut(s) 2318
Eco88I CYCGRG 1 cut(s) 615
EcoICRI GAGCTC 1 cut(s) 450
EcoO109I RGGNCCY 6 cut(s) 612, 1361, 1701, 1816, 1903, 1904
EcoRII CCWGG 2 cut(s) 1375, 2796
EcoT14I CCWWGG 7 cut(s) 90, 597, 858, 1398, 1805, 1953, 2334
EcoT38I GRGCYC 4 cut(s) 169, 452, 616, 1907
ErhI CCWWGG 7 cut(s) 90, 597, 858, 1398, 1805, 1953, 2334
Esp3I CGTCTC 1 cut(s) 353
FaqI GGGAC 4 cut(s) 275, 875, 1374, 1829
FauI CCCGC 1 cut(s) 2560
FauNDI CATATG 1 cut(s) 1564
FbaI TGATCA 2 cut(s) 3, 658
FblI GTMKAC 1 cut(s) 1713
FokI GGATG 7 cut(s) 104, 158, 614, 631, 841, 998, 1416
FriOI GRGCYC 4 cut(s) 169, 452, 616, 1907
FspBI CTAG 6 cut(s) 702, 741, 1170, 1995, 2030, 2582
GlaI GCGC 2 cut(s) 1548, 2238
GsuI CTGGAG 6 cut(s) 942, 1209, 1571, 2072, 2653, 2850
HaeIII GGCC 6 cut(s) 614, 1028, 1141, 1375, 1905, 2054
HapII CCGG 4 cut(s) 445, 616, 1760, 2433
HgaI GACGC 2 cut(s) 207, 2243
HhaI GCGC 2 cut(s) 1549, 2239
Hin6I GCGC 2 cut(s) 1547, 2237
HinP1I GCGC 2 cut(s) 1547, 2237
HincII GTYRAC 2 cut(s) 1243, 2676
HindII GTYRAC 2 cut(s) 1243, 2676
HindIII AAGCTT 4 cut(s) 41, 516, 2198, 2300
HinfI GANTC 6 cut(s) 263, 479, 1382, 2192, 2662, 2743
HpaI GTTAAC 1 cut(s) 1243
HpaII CCGG 4 cut(s) 445, 616, 1760, 2433
Hpy166II GTNNAC 7 cut(s) 718, 1243, 1324, 1714, 1827, 2676, 2782
Hpy188I TCNGA 7 cut(s) 51, 1236, 1274, 1452, 1766, 2589, 2641
Hpy8I GTNNAC 7 cut(s) 718, 1243, 1324, 1714, 1827, 2676, 2782
HpyAV CCTTC 4 cut(s) 33, 438, 1920, 2356
HpyCH4III ACNGT 6 cut(s) 629, 930, 968, 2077, 2098, 2218
HpyCH4IV ACGT 1 cut(s) 2427
HpyF10VI GCNNNNNNNGC 7 cut(s) 224, 293, 296, 1001, 1010, 1019, 1970
HpyF3I CTNAG 6 cut(s) 15, 50, 1318, 1449, 1467, 2699
HpySE526I ACGT 1 cut(s) 2427
HspAI GCGC 2 cut(s) 1547, 2237
KflI GGGWCCC 1 cut(s) 1361
Kpn2I TCCGGA 1 cut(s) 444
KpnI GGTACC 1 cut(s) 1929
Ksp22I TGATCA 2 cut(s) 3, 658
KspAI GTTAAC 1 cut(s) 1243
LguI GCTCTTC 1 cut(s) 1575
LmnI GCTCC 3 cut(s) 447, 455, 1096
LweI GCATC 4 cut(s) 583, 943, 1000, 1654
MaeI CTAG 6 cut(s) 702, 741, 1170, 1995, 2030, 2582
MaeII ACGT 1 cut(s) 2427
MaeIII GTNAC 8 cut(s) 346, 1045, 1061, 1080, 2098, 2162, 2428, 2740
MboII GAAGA 8 cut(s) 408, 1052, 1562, 1834, 1840, 2234, 2674, 2744
MfeI CAATTG 2 cut(s) 765, 1035
MflI RGATCY 4 cut(s) 1108, 1313, 1489, 2113
MhlI GDGCHC 6 cut(s) 169, 402, 452, 616, 1907, 2784
MlsI TGGCCA 2 cut(s) 1028, 1375
MluNI TGGCCA 2 cut(s) 1028, 1375
MlyI GAGTC 3 cut(s) 257, 473, 2737
MmeI TCCRAC 1 cut(s) 2320
Mox20I TGGCCA 2 cut(s) 1028, 1375
MroI TCCGGA 1 cut(s) 444
MroXI GAANNNNTTC 3 cut(s) 324, 1336, 1584
MscI TGGCCA 2 cut(s) 1028, 1375
MslI CAYNNNNRTG 1 cut(s) 194
Msp20I TGGCCA 2 cut(s) 1028, 1375
MspA1I CMGCKG 2 cut(s) 290, 2487
MspCI CTTAAG 1 cut(s) 2201
MspI CCGG 4 cut(s) 445, 616, 1760, 2433
MspR9I CCNGG 5 cut(s) 616, 617, 1377, 2434, 2798
MunI CAATTG 2 cut(s) 765, 1035
MvaI CCWGG 2 cut(s) 1377, 2798
MvnI CGCG 1 cut(s) 2237
MwoI GCNNNNNNNGC 7 cut(s) 224, 293, 296, 1001, 1010, 1019, 1970
NciI CCSGG 3 cut(s) 616, 617, 2434
NcoI CCATGG 2 cut(s) 1953, 2334
NdeI CATATG 1 cut(s) 1564
NmuCI GTSAC 5 cut(s) 346, 1080, 2162, 2428, 2740
NspI RCATGY 1 cut(s) 2170
PagI TCATGA 1 cut(s) 798
PciI ACATGT 1 cut(s) 2166
PciSI GCTCTTC 1 cut(s) 1575
PdmI GAANNNNTTC 3 cut(s) 324, 1336, 1584
PfeI GAWTC 3 cut(s) 1382, 2192, 2662
PflMI CCANNNNNTGG 5 cut(s) 1292, 1371, 1404, 1421, 1935
PinAI ACCGGT 1 cut(s) 1759
PleI GAGTC 3 cut(s) 257, 473, 2737
PpsI GAGTC 3 cut(s) 257, 473, 2737
PpuMI RGGWCCY 3 cut(s) 1361, 1701, 1816
PscI ACATGT 1 cut(s) 2166
PshBI ATTAAT 3 cut(s) 375, 1887, 2514
PsiI TTATAA 1 cut(s) 500
Psp124BI GAGCTC 1 cut(s) 452
Psp5II RGGWCCY 3 cut(s) 1361, 1701, 1816
Psp6I CCWGG 2 cut(s) 1375, 2796
PspGI CCWGG 2 cut(s) 1375, 2796
PspOMI GGGCCC 2 cut(s) 612, 1903
PspPPI RGGWCCY 3 cut(s) 1361, 1701, 1816
PstI CTGCAG 1 cut(s) 942
PstNI CAGNNNCTG 1 cut(s) 1739
PsuI RGATCY 4 cut(s) 1108, 1313, 1489, 2113
PvuII CAGCTG 2 cut(s) 290, 2487
RsaI GTAC 6 cut(s) 20, 747, 1057, 1758, 1927, 2034
RsaNI GTAC 6 cut(s) 19, 746, 1056, 1757, 1926, 2033
RseI CAYNNNNRTG 1 cut(s) 194
SacI GAGCTC 1 cut(s) 452
SapI GCTCTTC 1 cut(s) 1575
ScaI AGTACT 1 cut(s) 2034
SchI GAGTC 3 cut(s) 257, 473, 2737
ScrFI CCNGG 5 cut(s) 616, 617, 1377, 2434, 2798
SduI GDGCHC 6 cut(s) 169, 402, 452, 616, 1907, 2784
SfaNI GCATC 4 cut(s) 583, 943, 1000, 1654
SfcI CTRYAG 2 cut(s) 938, 1668
SinI GGWCC 5 cut(s) 341, 1361, 1701, 1816, 2342
SmaI CCCGGG 1 cut(s) 617
SmiMI CAYNNNNRTG 1 cut(s) 194
SmlI CTYRAG 1 cut(s) 2201
SmoI CTYRAG 1 cut(s) 2201
SpeI ACTAGT 1 cut(s) 2029
SsiI CCGC 4 cut(s) 294, 648, 1124, 2567
SspI AATATT 2 cut(s) 870, 2595
SspMI CTAG 6 cut(s) 702, 741, 1170, 1995, 2030, 2582
SstI GAGCTC 1 cut(s) 452
StyD4I CCNGG 5 cut(s) 614, 615, 1375, 2432, 2796
StyI CCWWGG 7 cut(s) 90, 597, 858, 1398, 1805, 1953, 2334
TaaI ACNGT 6 cut(s) 629, 930, 968, 2077, 2098, 2218
TaiI ACGT 1 cut(s) 2430
TaqI TCGA 4 cut(s) 83, 328, 440, 1103
TatI WGTACW 2 cut(s) 1055, 2032
TauI GCSGC 1 cut(s) 296
TfiI GAWTC 3 cut(s) 1382, 2192, 2662
TscAI CASTG 5 cut(s) 351, 562, 811, 1029, 1618
TseFI GTSAC 5 cut(s) 346, 1080, 2162, 2428, 2740
Tsp45I GTSAC 5 cut(s) 346, 1080, 2162, 2428, 2740
TspGWI ACGGA 2 cut(s) 848, 879
TspMI CCCGGG 1 cut(s) 615
TspRI CASTG 5 cut(s) 351, 562, 811, 1029, 1618
Van91I CCANNNNNTGG 5 cut(s) 1292, 1371, 1404, 1421, 1935
Vha464I CTTAAG 1 cut(s) 2201
VneI GTGCAC 1 cut(s) 2780
VpaK11BI GGWCC 5 cut(s) 341, 1361, 1701, 1816, 2342
VspI ATTAAT 3 cut(s) 375, 1887, 2514
XapI RAATTY 5 cut(s) 174, 1580, 2788, 2803, 2809
XceI RCATGY 1 cut(s) 2170
XcmI CCANNNNNNNNNTGG 1 cut(s) 1354
XmaI CCCGGG 1 cut(s) 615
XmiI GTMKAC 1 cut(s) 1713
XmnI GAANNNNTTC 3 cut(s) 324, 1336, 1584
XspI CTAG 6 cut(s) 702, 741, 1170, 1995, 2030, 2582
ZrmI AGTACT 1 cut(s) 2034
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.