Rw6G038720

Glutamate receptor

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
Physical Location & Seq
Forward (+)
62845502 .. 62849797
4296 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G038720.1

Sequence Viewer

Length: 1542 bp
ATGATCTTTGGCCTCGGCTCTGGCTCCACCGTCAAACACGCCGTGGATCGCTTGGGCGAGCTTTTACAACCGGGAAAAGTTCACAGCATCATCGGAATTTCTGAGAACACCCACCAACAAGTCATCTCTCTTAGAATTCCATTATCCAACCTCGATGAGTACCCGATCCTCGATCTCGCTATTGACGGTGCCGACGAGGTGGACCCCCACCTCAACCTAGTCAAAGGCCGCTGCAGATTGACTAGGAAATTCAGAAGACTCAAAATAATTATCAACAAAAAGTACGCTTCCCACCTTAATAAGCTTGCTATTATTTCAATCTTTGTCTTCTTTCTTTCTCCATCGATTTTGATGGCCAAGCCCCAAAACAAAAGCACTACTCCAGTGAATGTGGGGGTCGTTCTTCATGACCTTAATCATTCAGTTAGTGGAAAAGGCAAGCTCCGGTGGAAAAGGCAGTTCCAAAAAGACCATCCACTCGTCTTTGGCGCTGAATTGGATGTTTCTGGACTTTGGGCTTATGATGCTGCTTTTGCACTTGCAATGGCAATTGAACGGGTAATTGGAACTGCTGCCAAAGTTGTCAGCAATTTAGGTAGATTTGTGATGGCTGTATGGATATTTGTTGTGCTAGTGTTGACAATAAATTACACAGCCAATCTAACGTCACTATACACCGTTCAAAAACTAAAGCCAACTGTAACCAGCTTAAAGGATCTGCTAAGGGAAGGGGAAAACGTTGGCTATGTTATCAATCCTGATGTTTACCAACGGTTGAAGCAAGTAGGTTTTGAAGATTCCAAGCTCATGGCTTTGGAAACTATGGAAGAAATTGATGAAGCTCTTTCAAAAGGGAGTGCAAACGGAGGTGTTGCTGCTGTTGTTCATGAAACCCCCTACATGATGCTTTTTCTTGCAAAATATTGCGACAAATATACCATGACTGGACCCTTCTCTAAAACAGATGGATTTGCCTTTGCATTTCCGAAACGTTCTCCTATCCTACCTGATATATCATTAGCAGTCTTACATATGACCAGGGGAGACGAGGTGACGAACATTAAAAGCATATGGTTCAAGAATGAAGGCAATTGTGAAGGCTCAAGTACCGCGAAGGAATTTAGCAGTAGTATTGGCACTGATAGCTTTTGGGTCCTATTCCTGATTGCCGGGACGGCTTCAATACTCGCTCTCATCATATTTGTAGTTTCCTTCATTTATAGGCATAGGCACATCTTCAACCAACCAGCTGATTCAAGACTCTCGACATGGACAAAGATTCAGACCGTGTTTAAAATTTTCAACGAAAAGGACCCCAACTGTCGCGCCTTCAAATGTAGGCAACCGCCAAGTGCAGTTGAGGCCACAACCGACCACTTCTATCCCCGAAGTTCGGTCATCGACAATTCGAGCCACGAAAATACCAATTCTGCATTTTCTGGAGAGCAACACACATCCTCAACTGATCAAGCCTCTCCAGAAATCGCCCCTCCAGCCACTGACGTTGTCATGACCATTCAAGCACAGTACTCCATGTCCTAG

Protein Analysis

513

Amino Acids

56.9

Weight (kDa)

8.73

Isoelectric Point (pI)

31.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rib_5-P_isom_A PF06026 31 - 78 1.6e-11 Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
Lig_chan PF00060 189 - 393 1.7e-19 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 188
AccII CGCG 2 cut(s) 1112, 1326
AciI CCGC 3 cut(s) 229, 1110, 1346
AclI AACGTT 2 cut(s) 738, 991
AclWI GGATC 3 cut(s) 54, 160, 723
AcoI YGGCCR 1 cut(s) 354
AcsI RAATTY 5 cut(s) 96, 135, 248, 1118, 1296
AdeI CACNNNGTG 1 cut(s) 43
AfaI GTAC 4 cut(s) 161, 284, 1108, 1529
AfiI CCNNNNNNNGG 1 cut(s) 1393
AjnI CCWGG 1 cut(s) 1037
AjuI GAANNNNNNNTTGG 2 cut(s) 546, 578
AluBI AGCT 8 cut(s) 61, 304, 442, 708, 805, 842, 1146, 1250
AluI AGCT 8 cut(s) 61, 304, 442, 708, 805, 842, 1146, 1250
Alw26I GTCTC 1 cut(s) 1038
AlwI GGATC 3 cut(s) 54, 160, 723
AlwNI CAGNNNCTG 1 cut(s) 1499
AoxI GGCC 4 cut(s) 10, 226, 354, 1362
ApeKI GCWGC 4 cut(s) 231, 527, 572, 875
ApoI RAATTY 5 cut(s) 96, 135, 248, 1118, 1296
AspLEI GCGC 2 cut(s) 491, 1328
AspS9I GGNCC 4 cut(s) 202, 947, 1153, 1312
AsuC2I CCSGG 2 cut(s) 72, 1171
AsuHPI GGTGA 1 cut(s) 1063
AvaII GGWCC 4 cut(s) 202, 947, 1153, 1312
BalI TGGCCA 1 cut(s) 356
BanI GGYRCC 1 cut(s) 188
BbsI GAAGAC 2 cut(s) 262, 319
BbvI GCAGC 4 cut(s) 218, 514, 559, 862
BccI CCATC 5 cut(s) 346, 349, 480, 601, 959
BceAI ACGGC 2 cut(s) 26, 1191
BciT130I CCWGG 1 cut(s) 1039
BclI TGATCA 1 cut(s) 1465
BcnI CCSGG 2 cut(s) 72, 1171
BcoDI GTCTC 1 cut(s) 1038
BfaI CTAG 4 cut(s) 218, 243, 632, 1540
BfmI CTRYAG 1 cut(s) 232
BfoI RGCGCY 1 cut(s) 492
BglI GCCNNNNNGGC 1 cut(s) 1175
BisI GCNGC 5 cut(s) 229, 232, 528, 573, 876
BlsI GCNGC 5 cut(s) 230, 233, 529, 574, 877
BmcAI AGTACT 1 cut(s) 1529
Bme1390I CCNGG 3 cut(s) 72, 1039, 1171
Bme18I GGWCC 4 cut(s) 202, 947, 1153, 1312
BmgT120I GGNCC 4 cut(s) 202, 947, 1153, 1312
BmiI GGNNCC 6 cut(s) 25, 190, 204, 949, 1154, 1314
BmrFI CCNGG 3 cut(s) 72, 1039, 1171
BmsI GCATC 3 cut(s) 96, 514, 894
BpiI GAAGAC 2 cut(s) 262, 319
BpmI CTGGAG 4 cut(s) 366, 1461, 1461, 1476
Bpu10I CCTNAGC 1 cut(s) 722
BpuEI CTTGAG 1 cut(s) 1087
BpuMI CCSGG 2 cut(s) 72, 1171
Bsa29I ATCGAT 1 cut(s) 344
BsaJI CCNNGG 3 cut(s) 13, 42, 1038
BsaWI WCCGGW 1 cut(s) 444
BsaXI ACNNNNNCTCC 2 cut(s) 1035, 1065
Bsc4I CCNNNNNNNGG 1 cut(s) 1393
Bse1I ACTGG 2 cut(s) 383, 949
Bse3DI GCAATG 1 cut(s) 549
BseBI CCWGG 1 cut(s) 1039
BseCI ATCGAT 1 cut(s) 344
BseDI CCNNGG 3 cut(s) 13, 42, 1038
BseGI GGATG 3 cut(s) 472, 505, 1454
BseLI CCNNNNNNNGG 1 cut(s) 1393
BseMI GCAATG 1 cut(s) 549
BseMII CTCAG 1 cut(s) 93
BseNI ACTGG 2 cut(s) 383, 949
BseXI GCAGC 4 cut(s) 218, 514, 559, 862
BsgI GTGCAG 1 cut(s) 1374
Bsh1236I CGCG 2 cut(s) 1112, 1326
BshFI GGCC 4 cut(s) 12, 228, 356, 1364
BshNI GGYRCC 1 cut(s) 188
BshVI ATCGAT 1 cut(s) 344
BsiSI CCGG 3 cut(s) 71, 445, 1170
BslFI GGGAC 1 cut(s) 1186
BslI CCNNNNNNNGG 1 cut(s) 1393
BsmAI GTCTC 1 cut(s) 1038
BsmBI CGTCTC 1 cut(s) 1038
BsmFI GGGAC 1 cut(s) 1186
BsnI GGCC 4 cut(s) 12, 228, 356, 1364
Bsp143I GATC 6 cut(s) 3, 46, 165, 172, 715, 1465
BspACI CCGC 3 cut(s) 229, 1110, 1346
BspANI GGCC 4 cut(s) 12, 228, 356, 1364
BspCNI CTCAG 1 cut(s) 94
BspDI ATCGAT 1 cut(s) 344
BspFNI CGCG 2 cut(s) 1112, 1326
BspHI TCATGA 3 cut(s) 406, 886, 1509
BspLI GGNNCC 6 cut(s) 25, 190, 204, 949, 1154, 1314
BspMAI CTGCAG 1 cut(s) 236
BspPI GGATC 3 cut(s) 54, 160, 723
BspT107I GGYRCC 1 cut(s) 188
BsrDI GCAATG 1 cut(s) 549
BsrI ACTGG 2 cut(s) 383, 949
BssECI CCNNGG 3 cut(s) 13, 42, 1038
BssMI GATC 6 cut(s) 3, 46, 165, 172, 715, 1465
Bst2UI CCWGG 1 cut(s) 1039
Bst4CI ACNGT 8 cut(s) 31, 188, 679, 700, 774, 1288, 1322, 1527
BstC8I GCNNGC 3 cut(s) 59, 306, 440
BstDEI CTNAG 3 cut(s) 102, 131, 722
BstDSI CCRYGG 1 cut(s) 42
BstF5I GGATG 3 cut(s) 472, 505, 1454
BstFNI CGCG 2 cut(s) 1112, 1326
BstH2I RGCGCY 1 cut(s) 492
BstHHI GCGC 2 cut(s) 491, 1328
BstKTI GATC 6 cut(s) 6, 49, 168, 175, 718, 1468
BstMAI GTCTC 1 cut(s) 1038
BstMBI GATC 6 cut(s) 3, 46, 165, 172, 715, 1465
BstMWI GCNNNNNNNGC 6 cut(s) 524, 533, 1143, 1175, 1361, 1493
BstNI CCWGG 1 cut(s) 1039
BstSCI CCNGG 3 cut(s) 70, 1037, 1169
BstSFI CTRYAG 1 cut(s) 232
BstUI CGCG 2 cut(s) 1112, 1326
BstV1I GCAGC 4 cut(s) 218, 514, 559, 862
BstV2I GAAGAC 2 cut(s) 262, 319
BstX2I RGATCY 1 cut(s) 715
BstXI CCANNNNNNTGG 1 cut(s) 808
BstYI RGATCY 1 cut(s) 715
Bsu15I ATCGAT 1 cut(s) 344
BsuRI GGCC 4 cut(s) 12, 228, 356, 1364
BsuTUI ATCGAT 1 cut(s) 344
BtgI CCRYGG 1 cut(s) 42
BtsCI GGATG 3 cut(s) 472, 505, 1454
BtsIMutI CAGTG 3 cut(s) 390, 1137, 1497
Cac8I GCNNGC 3 cut(s) 59, 306, 440
CaiI CAGNNNCTG 1 cut(s) 1499
CciI TCATGA 3 cut(s) 406, 886, 1509
CfoI GCGC 2 cut(s) 491, 1328
Cfr13I GGNCC 4 cut(s) 202, 947, 1153, 1312
ClaI ATCGAT 1 cut(s) 344
Csp6I GTAC 4 cut(s) 160, 283, 1107, 1528
CspCI CAANNNNNGTGG 2 cut(s) 1486, 1521
CviAII CATG 8 cut(s) 407, 808, 887, 901, 940, 1269, 1510, 1534
CviQI GTAC 4 cut(s) 160, 283, 1107, 1528
DdeI CTNAG 3 cut(s) 102, 131, 722
DpnI GATC 6 cut(s) 5, 48, 167, 174, 717, 1467
DpnII GATC 6 cut(s) 3, 46, 165, 172, 715, 1465
DraI TTTAAA 1 cut(s) 1294
DraIII CACNNNGTG 1 cut(s) 43
EaeI YGGCCR 1 cut(s) 354
Eco47I GGWCC 4 cut(s) 202, 947, 1153, 1312
EcoO109I RGGNCCY 2 cut(s) 1153, 1312
EcoRI GAATTC 1 cut(s) 135
EcoRII CCWGG 1 cut(s) 1037
Esp3I CGTCTC 1 cut(s) 1038
FaeI CATG 8 cut(s) 410, 811, 890, 904, 943, 1272, 1513, 1537
FaqI GGGAC 1 cut(s) 1186
FatI CATG 8 cut(s) 406, 807, 886, 900, 939, 1268, 1509, 1533
FauNDI CATATG 2 cut(s) 1032, 1070
FbaI TGATCA 1 cut(s) 1465
Fnu4HI GCNGC 5 cut(s) 229, 232, 528, 573, 876
FokI GGATG 3 cut(s) 459, 512, 1441
Fsp4HI GCNGC 5 cut(s) 229, 232, 528, 573, 876
FspBI CTAG 4 cut(s) 218, 243, 632, 1540
GlaI GCGC 2 cut(s) 490, 1327
GluI GCNGC 5 cut(s) 229, 232, 528, 573, 876
GsuI CTGGAG 4 cut(s) 366, 1461, 1461, 1476
HaeII RGCGCY 1 cut(s) 492
HaeIII GGCC 4 cut(s) 12, 228, 356, 1364
HapII CCGG 3 cut(s) 71, 445, 1170
HhaI GCGC 2 cut(s) 491, 1328
Hin1II CATG 8 cut(s) 410, 811, 890, 904, 943, 1272, 1513, 1537
Hin6I GCGC 2 cut(s) 489, 1326
HinP1I GCGC 2 cut(s) 489, 1326
HincII GTYRAC 1 cut(s) 639
HindII GTYRAC 1 cut(s) 639
HindIII AAGCTT 1 cut(s) 302
HinfI GANTC 5 cut(s) 258, 797, 1253, 1260, 1279
HpaII CCGG 3 cut(s) 71, 445, 1170
HphI GGTGA 1 cut(s) 1063
Hpy166II GTNNAC 4 cut(s) 82, 202, 639, 766
Hpy188I TCNGA 5 cut(s) 95, 103, 254, 987, 1284
Hpy8I GTNNAC 4 cut(s) 82, 202, 639, 766
Hpy99I CGWCG 1 cut(s) 197
HpyAV CCTTC 7 cut(s) 722, 961, 1079, 1091, 1108, 1222, 1339
HpyCH4III ACNGT 8 cut(s) 31, 188, 679, 700, 774, 1288, 1322, 1527
HpyCH4IV ACGT 4 cut(s) 665, 738, 991, 1503
HpyCH4V TGCA 8 cut(s) 234, 536, 542, 860, 917, 980, 1355, 1433
HpyF10VI GCNNNNNNNGC 6 cut(s) 524, 533, 1143, 1175, 1361, 1493
HpyF3I CTNAG 3 cut(s) 102, 131, 722
HpySE526I ACGT 4 cut(s) 665, 738, 991, 1503
Hsp92II CATG 8 cut(s) 410, 811, 890, 904, 943, 1272, 1513, 1537
HspAI GCGC 2 cut(s) 489, 1326
Ksp22I TGATCA 1 cut(s) 1465
Kzo9I GATC 6 cut(s) 3, 46, 165, 172, 715, 1465
LmnI GCTCC 2 cut(s) 29, 447
Lsp1109I GCAGC 4 cut(s) 218, 514, 559, 862
LweI GCATC 3 cut(s) 96, 514, 894
MaeI CTAG 4 cut(s) 218, 243, 632, 1540
MaeII ACGT 4 cut(s) 665, 738, 991, 1503
MaeIII GTNAC 3 cut(s) 666, 700, 1051
MalI GATC 6 cut(s) 5, 48, 167, 174, 717, 1467
MboI GATC 6 cut(s) 3, 46, 165, 172, 715, 1465
MboII GAAGA 6 cut(s) 267, 319, 395, 806, 839, 1228
MfeI CAATTG 2 cut(s) 549, 1090
MflI RGATCY 1 cut(s) 715
MlsI TGGCCA 1 cut(s) 356
MluNI TGGCCA 1 cut(s) 356
MlyI GAGTC 2 cut(s) 252, 1254
MmeI TCCRAC 1 cut(s) 171
Mox20I TGGCCA 1 cut(s) 356
MscI TGGCCA 1 cut(s) 356
MseI TTAA 5 cut(s) 297, 414, 710, 1062, 1293
Msp20I TGGCCA 1 cut(s) 356
MspA1I CMGCKG 2 cut(s) 231, 1250
MspI CCGG 3 cut(s) 71, 445, 1170
MspR9I CCNGG 3 cut(s) 72, 1039, 1171
MunI CAATTG 2 cut(s) 549, 1090
MvaI CCWGG 1 cut(s) 1039
MvnI CGCG 2 cut(s) 1112, 1326
MwoI GCNNNNNNNGC 6 cut(s) 524, 533, 1143, 1175, 1361, 1493
NciI CCSGG 2 cut(s) 72, 1171
NdeI CATATG 2 cut(s) 1032, 1070
NdeII GATC 6 cut(s) 3, 46, 165, 172, 715, 1465
NlaIII CATG 8 cut(s) 410, 811, 890, 904, 943, 1272, 1513, 1537
NlaIV GGNNCC 6 cut(s) 25, 190, 204, 949, 1154, 1314
NmuCI GTSAC 2 cut(s) 666, 1051
PagI TCATGA 3 cut(s) 406, 886, 1509
PcsI WCGNNNNNNNCGW 1 cut(s) 192
PfeI GAWTC 3 cut(s) 797, 1253, 1279
PflFI GACNNNGTC 1 cut(s) 1505
PkrI GCNGC 5 cut(s) 230, 233, 529, 574, 877
PleI GAGTC 2 cut(s) 252, 1254
PpsI GAGTC 2 cut(s) 252, 1254
PpuMI RGGWCCY 2 cut(s) 1153, 1312
Psp1406I AACGTT 2 cut(s) 738, 991
Psp5II RGGWCCY 2 cut(s) 1153, 1312
Psp6I CCWGG 1 cut(s) 1037
PspGI CCWGG 1 cut(s) 1037
PspN4I GGNNCC 6 cut(s) 25, 190, 204, 949, 1154, 1314
PspPI GGNCC 4 cut(s) 202, 947, 1153, 1312
PspPPI RGGWCCY 2 cut(s) 1153, 1312
PstI CTGCAG 1 cut(s) 236
PstNI CAGNNNCTG 1 cut(s) 1499
PsuI RGATCY 1 cut(s) 715
PsyI GACNNNGTC 1 cut(s) 1505
PvuII CAGCTG 1 cut(s) 1250
RsaI GTAC 4 cut(s) 161, 284, 1108, 1529
RsaNI GTAC 4 cut(s) 160, 283, 1107, 1528
SaqAI TTAA 5 cut(s) 297, 414, 710, 1062, 1293
SatI GCNGC 5 cut(s) 229, 232, 528, 573, 876
Sau3AI GATC 6 cut(s) 3, 46, 165, 172, 715, 1465
Sau96I GGNCC 4 cut(s) 202, 947, 1153, 1312
ScaI AGTACT 1 cut(s) 1529
SchI GAGTC 2 cut(s) 252, 1254
ScrFI CCNGG 3 cut(s) 72, 1039, 1171
SfaNI GCATC 3 cut(s) 96, 514, 894
SfcI CTRYAG 1 cut(s) 232
SinI GGWCC 4 cut(s) 202, 947, 1153, 1312
SmlI CTYRAG 1 cut(s) 1102
SmoI CTYRAG 1 cut(s) 1102
SsiI CCGC 3 cut(s) 229, 1110, 1346
SspI AATATT 1 cut(s) 923
SspMI CTAG 4 cut(s) 218, 243, 632, 1540
StyD4I CCNGG 3 cut(s) 70, 1037, 1169
TaaI ACNGT 8 cut(s) 31, 188, 679, 700, 774, 1288, 1322, 1527
TaiI ACGT 4 cut(s) 668, 741, 994, 1506
TaqI TCGA 6 cut(s) 153, 171, 344, 1265, 1401, 1409
TaqII GACCGA 1 cut(s) 1384
TatI WGTACW 1 cut(s) 1527
TauI GCSGC 1 cut(s) 231
TfiI GAWTC 3 cut(s) 797, 1253, 1279
Tru1I TTAA 5 cut(s) 297, 414, 710, 1062, 1293
Tru9I TTAA 5 cut(s) 297, 414, 710, 1062, 1293
TscAI CASTG 3 cut(s) 390, 1144, 1504
TseFI GTSAC 2 cut(s) 666, 1051
TseI GCWGC 4 cut(s) 231, 527, 572, 875
Tsp45I GTSAC 2 cut(s) 666, 1051
TspDTI ATGAA 6 cut(s) 395, 852, 875, 903, 1098, 1204
TspGWI ACGGA 1 cut(s) 879
TspRI CASTG 3 cut(s) 390, 1144, 1504
Tth111I GACNNNGTC 1 cut(s) 1505
VpaK11BI GGWCC 4 cut(s) 202, 947, 1153, 1312
XapI RAATTY 5 cut(s) 96, 135, 248, 1118, 1296
XspI CTAG 4 cut(s) 218, 243, 632, 1540
ZrmI AGTACT 1 cut(s) 1529
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.