Rorug06G0383400

Glutamate receptor

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Forward (+)
52894472 .. 52897576
3105 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0383400.1

Sequence Viewer

Length: 876 bp
ATGGAGAAAGTCAGAAGACCATCGCACGCCGGTTCTTGGTACACCGACAACCCTAAAAAGTTAGCAGAAGAGCTTGAAGGGTGGCTCAGAGAGTCTGGGCTCACCAAGTCTCCTGATGTACGAGGTGTCATTGCTCCGCATGCAGGTTATTCATATTCGGGTCGTGCTGCTGCCTATGCATTTGGCAACATTGACCCAACAAACATTACCCGGGTGTTCCTTCTTGGTCCATCTCATCACTATTACACTCCAAAGTGTGCCGTTTCAACAGCCACAGTTTACAGGACCCCCATTGGAGACCTACCTGTTGATTTGGAAGTGATTGATGAGCTAAAAGCTACTGGAAAATTCGAAACCATGGATATTCGTGTTGATGAGGCTGAACATAGCATGGAAATGCATTTACCATATCTTGCTAAAGTTTTTGAAGGGCACCCAGTTAAAGTTGTACCAATTTTGGTTGGTGCTCTTAAAGCTGAAGCAGAAGCTATGTATGGACAGCTCCTTGCCAAATATGTAGATGATCCAAAAAATTTCTTCTCTGTGTCATCAGACTTTTGTCATTGGGGATCTCGGTTCAACTACGTGCATTATGACAAGAAACATGGGGCCATACACAGATCCATTGAGGCTTTGGACAGGATGGGAATGGATATAATAGAAACAGGAAATCCTGATGCATTCAAACAGTATCTGTCAGAGTATGATAACACCATTTGTGGGCGCCATCCAATAAGCGTTTTTCTTCATATGCTGAGAAACTGCTCAACAAACATAAAGATCAATTTCCTCCGTTATGAGCAGTCAAGTCAGTGCAAAACTATGAGGGACAGCAGTGTAAGCTATGCATCCGCAGCAGCAAAGTTGGATGCTTGA

Protein Analysis

291

Amino Acids

32.69

Weight (kDa)

6.5

Isoelectric Point (pI)

37.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Memo PF01875 7 - 285 1.7e-80 Memo-like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 134
AccB1I GGYRCC 2 cut(s) 432, 723
AciI CCGC 2 cut(s) 137, 852
AclWI GGATC 3 cut(s) 518, 577, 615
AcsI RAATTY 2 cut(s) 347, 532
AcuI CTGAAG 1 cut(s) 498
AcyI GRCGYC 1 cut(s) 724
AfaI GTAC 3 cut(s) 41, 120, 450
AfiI CCNNNNNNNGG 3 cut(s) 36, 143, 720
AgsI TTSAA 5 cut(s) 77, 267, 428, 580, 685
AluBI AGCT 7 cut(s) 73, 331, 338, 476, 488, 502, 843
AluI AGCT 7 cut(s) 73, 331, 338, 476, 488, 502, 843
Alw21I GWGCWC 1 cut(s) 469
Alw26I GTCTC 2 cut(s) 114, 291
AlwI GGATC 3 cut(s) 518, 577, 615
AlwNI CAGNNNCTG 1 cut(s) 694
Ama87I CYCGRG 1 cut(s) 210
AoxI GGCC 1 cut(s) 609
ApeKI GCWGC 4 cut(s) 167, 170, 854, 857
ApoI RAATTY 2 cut(s) 347, 532
AspLEI GCGC 1 cut(s) 726
AspS9I GGNCC 3 cut(s) 227, 285, 609
AsuC2I CCSGG 2 cut(s) 211, 212
AsuHPI GGTGA 1 cut(s) 94
AsuII TTCGAA 1 cut(s) 351
AvaI CYCGRG 1 cut(s) 210
AvaII GGWCC 2 cut(s) 227, 285
BaeGI GKGCMC 1 cut(s) 435
BanI GGYRCC 2 cut(s) 432, 723
BanII GRGCYC 1 cut(s) 102
BbsI GAAGAC 1 cut(s) 22
Bbv12I GWGCWC 1 cut(s) 469
BbvI GCAGC 4 cut(s) 154, 157, 866, 869
BccI CCATC 4 cut(s) 28, 238, 637, 735
BceAI ACGGC 1 cut(s) 245
BcnI CCSGG 2 cut(s) 211, 212
BcoDI GTCTC 2 cut(s) 114, 291
BfoI RGCGCY 1 cut(s) 727
BfuAI ACCTGC 1 cut(s) 134
BisI GCNGC 4 cut(s) 168, 171, 855, 858
BlsI GCNGC 4 cut(s) 169, 172, 856, 859
Bme1390I CCNGG 2 cut(s) 211, 212
Bme18I GGWCC 2 cut(s) 227, 285
BmeT110I CYCGRG 1 cut(s) 210
BmgT120I GGNCC 3 cut(s) 227, 285, 609
BmiI GGNNCC 4 cut(s) 287, 434, 610, 725
BmrFI CCNGG 2 cut(s) 211, 212
BmrI ACTGGG 1 cut(s) 431
BmsI GCATC 3 cut(s) 667, 857, 859
BmuI ACTGGG 1 cut(s) 431
BoxI GACNNNNGTC 1 cut(s) 558
BpiI GAAGAC 1 cut(s) 22
Bpu14I TTCGAA 1 cut(s) 351
BpuMI CCSGG 2 cut(s) 211, 212
BsaAI YACGTR 1 cut(s) 586
BsaHI GRCGYC 1 cut(s) 724
BsaI GGTCTC 1 cut(s) 291
BsaJI CCNNGG 2 cut(s) 210, 357
BsaXI ACNNNNNCTCC 2 cut(s) 94, 124
Bsc4I CCNNNNNNNGG 3 cut(s) 36, 143, 720
Bse118I RCCGGY 1 cut(s) 29
Bse1I ACTGG 2 cut(s) 346, 437
Bse3DI GCAATG 1 cut(s) 129
BseDI CCNNGG 2 cut(s) 210, 357
BseGI GGATG 4 cut(s) 648, 727, 848, 874
BseLI CCNNNNNNNGG 3 cut(s) 36, 143, 720
BseMI GCAATG 1 cut(s) 129
BseMII CTCAG 2 cut(s) 100, 746
BseNI ACTGG 2 cut(s) 346, 437
BseSI GKGCMC 1 cut(s) 435
BseXI GCAGC 4 cut(s) 154, 157, 866, 869
BshFI GGCC 1 cut(s) 611
BshNI GGYRCC 2 cut(s) 432, 723
BsiHKAI GWGCWC 1 cut(s) 469
BsiHKCI CYCGRG 1 cut(s) 210
BsiSI CCGG 2 cut(s) 30, 211
BslFI GGGAC 1 cut(s) 842
BslI CCNNNNNNNGG 3 cut(s) 36, 143, 720
BsmAI GTCTC 2 cut(s) 114, 291
BsmFI GGGAC 1 cut(s) 842
BsmI GAATGC 1 cut(s) 680
BsnI GGCC 1 cut(s) 611
Bso31I GGTCTC 1 cut(s) 291
BsoBI CYCGRG 1 cut(s) 210
Bsp119I TTCGAA 1 cut(s) 351
Bsp1286I GDGCHC 3 cut(s) 102, 435, 469
Bsp143I GATC 4 cut(s) 523, 569, 620, 780
Bsp19I CCATGG 1 cut(s) 357
BspACI CCGC 2 cut(s) 137, 852
BspANI GGCC 1 cut(s) 611
BspCNI CTCAG 2 cut(s) 99, 747
BspLI GGNNCC 4 cut(s) 287, 434, 610, 725
BspMI ACCTGC 1 cut(s) 134
BspPI GGATC 3 cut(s) 518, 577, 615
BspQI GCTCTTC 1 cut(s) 63
BspT104I TTCGAA 1 cut(s) 351
BspT107I GGYRCC 2 cut(s) 432, 723
BspTNI GGTCTC 1 cut(s) 291
BsrDI GCAATG 1 cut(s) 129
BsrFI RCCGGY 1 cut(s) 29
BsrI ACTGG 2 cut(s) 346, 437
BssAI RCCGGY 1 cut(s) 29
BssECI CCNNGG 2 cut(s) 210, 357
BssMI GATC 4 cut(s) 523, 569, 620, 780
BssNI GRCGYC 1 cut(s) 724
BssT1I CCWWGG 1 cut(s) 357
Bst4CI ACNGT 2 cut(s) 277, 690
Bst6I CTCTTC 1 cut(s) 63
BstACI GRCGYC 1 cut(s) 724
BstBAI YACGTR 1 cut(s) 586
BstBI TTCGAA 1 cut(s) 351
BstC8I GCNNGC 2 cut(s) 27, 141
BstDEI CTNAG 2 cut(s) 86, 755
BstDSI CCRYGG 1 cut(s) 357
BstF5I GGATG 4 cut(s) 648, 727, 848, 874
BstH2I RGCGCY 1 cut(s) 727
BstHHI GCGC 1 cut(s) 726
BstKTI GATC 4 cut(s) 526, 572, 623, 783
BstMAI GTCTC 2 cut(s) 114, 291
BstMBI GATC 4 cut(s) 523, 569, 620, 780
BstMWI GCNNNNNNNGC 5 cut(s) 140, 176, 473, 840, 854
BstNSI RCATGY 1 cut(s) 143
BstPAI GACNNNNGTC 1 cut(s) 558
BstSCI CCNGG 2 cut(s) 209, 210
BstSLI GKGCMC 1 cut(s) 435
BstV1I GCAGC 4 cut(s) 154, 157, 866, 869
BstV2I GAAGAC 1 cut(s) 22
BstX2I RGATCY 2 cut(s) 569, 620
BstYI RGATCY 2 cut(s) 569, 620
BsuRI GGCC 1 cut(s) 611
BtgI CCRYGG 1 cut(s) 357
BtgZI GCGATG 1 cut(s) 6
BtsCI GGATG 4 cut(s) 648, 727, 848, 874
BtsI GCAGTG 1 cut(s) 841
BtsIMutI CAGTG 2 cut(s) 818, 841
BveI ACCTGC 1 cut(s) 134
Cac8I GCNNGC 2 cut(s) 27, 141
CaiI CAGNNNCTG 1 cut(s) 694
CfoI GCGC 1 cut(s) 726
Cfr10I RCCGGY 1 cut(s) 29
Cfr13I GGNCC 3 cut(s) 227, 285, 609
Cfr9I CCCGGG 1 cut(s) 210
Csp6I GTAC 3 cut(s) 40, 119, 449
CviAII CATG 4 cut(s) 140, 358, 391, 605
CviQI GTAC 3 cut(s) 40, 119, 449
DdeI CTNAG 2 cut(s) 86, 755
DinI GGCGCC 1 cut(s) 725
DpnI GATC 4 cut(s) 525, 571, 622, 782
DpnII GATC 4 cut(s) 523, 569, 620, 780
Eam1104I CTCTTC 1 cut(s) 63
EarI CTCTTC 1 cut(s) 63
Eco130I CCWWGG 1 cut(s) 357
Eco24I GRGCYC 1 cut(s) 102
Eco31I GGTCTC 1 cut(s) 291
Eco47I GGWCC 2 cut(s) 227, 285
Eco57I CTGAAG 1 cut(s) 498
Eco88I CYCGRG 1 cut(s) 210
EcoO109I RGGNCCY 1 cut(s) 285
EcoT14I CCWWGG 1 cut(s) 357
EcoT22I ATGCAT 4 cut(s) 181, 402, 682, 850
EcoT38I GRGCYC 1 cut(s) 102
EgeI GGCGCC 1 cut(s) 725
EheI GGCGCC 1 cut(s) 725
ErhI CCWWGG 1 cut(s) 357
FaeI CATG 4 cut(s) 143, 361, 394, 608
FaqI GGGAC 1 cut(s) 842
FatI CATG 4 cut(s) 139, 357, 390, 604
FauNDI CATATG 1 cut(s) 750
Fnu4HI GCNGC 4 cut(s) 168, 171, 855, 858
FokI GGATG 3 cut(s) 655, 714, 835
FriOI GRGCYC 1 cut(s) 102
Fsp4HI GCNGC 4 cut(s) 168, 171, 855, 858
GlaI GCGC 1 cut(s) 725
GluI GCNGC 4 cut(s) 168, 171, 855, 858
HaeII RGCGCY 1 cut(s) 727
HaeIII GGCC 1 cut(s) 611
HapII CCGG 2 cut(s) 30, 211
HhaI GCGC 1 cut(s) 726
Hin1I GRCGYC 1 cut(s) 724
Hin1II CATG 4 cut(s) 143, 361, 394, 608
Hin6I GCGC 1 cut(s) 724
HinP1I GCGC 1 cut(s) 724
HinfI GANTC 1 cut(s) 92
HpaII CCGG 2 cut(s) 30, 211
HphI GGTGA 1 cut(s) 94
Hpy166II GTNNAC 2 cut(s) 42, 280
Hpy188I TCNGA 4 cut(s) 14, 89, 553, 700
Hpy188III TCNNGA 2 cut(s) 113, 674
Hpy8I GTNNAC 2 cut(s) 42, 280
HpyAV CCTTC 3 cut(s) 71, 230, 422
HpyCH4III ACNGT 2 cut(s) 277, 690
HpyCH4IV ACGT 1 cut(s) 585
HpyCH4V TGCA 7 cut(s) 143, 179, 400, 589, 680, 816, 848
HpyF10VI GCNNNNNNNGC 5 cut(s) 140, 176, 473, 840, 854
HpyF3I CTNAG 2 cut(s) 86, 755
HpySE526I ACGT 1 cut(s) 585
Hsp92I GRCGYC 1 cut(s) 724
Hsp92II CATG 4 cut(s) 143, 361, 394, 608
HspAI GCGC 1 cut(s) 724
KasI GGCGCC 1 cut(s) 723
Kzo9I GATC 4 cut(s) 523, 569, 620, 780
LguI GCTCTTC 1 cut(s) 63
LmnI GCTCC 2 cut(s) 139, 507
Lsp1109I GCAGC 4 cut(s) 154, 157, 866, 869
LweI GCATC 3 cut(s) 667, 857, 859
MaeII ACGT 1 cut(s) 585
MalI GATC 4 cut(s) 525, 571, 622, 782
MboI GATC 4 cut(s) 523, 569, 620, 780
MboII GAAGA 4 cut(s) 27, 80, 529, 737
MflI RGATCY 2 cut(s) 569, 620
MhlI GDGCHC 3 cut(s) 102, 435, 469
MluCI AATT 4 cut(s) 347, 453, 532, 784
Mly113I GGCGCC 1 cut(s) 724
MlyI GAGTC 1 cut(s) 101
MmeI TCCRAC 1 cut(s) 846
MnlI CCTC 5 cut(s) 116, 370, 622, 800, 819
Mph1103I ATGCAT 4 cut(s) 181, 402, 682, 850
MseI TTAA 2 cut(s) 441, 471
MslI CAYNNNNRTG 1 cut(s) 395
MspI CCGG 2 cut(s) 30, 211
MspR9I CCNGG 2 cut(s) 211, 212
Mva1269I GAATGC 1 cut(s) 680
MwoI GCNNNNNNNGC 5 cut(s) 140, 176, 473, 840, 854
NarI GGCGCC 1 cut(s) 724
NciI CCSGG 2 cut(s) 211, 212
NcoI CCATGG 1 cut(s) 357
NdeI CATATG 1 cut(s) 750
NdeII GATC 4 cut(s) 523, 569, 620, 780
NlaIII CATG 4 cut(s) 143, 361, 394, 608
NlaIV GGNNCC 4 cut(s) 287, 434, 610, 725
NsiI ATGCAT 4 cut(s) 181, 402, 682, 850
NspI RCATGY 1 cut(s) 143
NspV TTCGAA 1 cut(s) 351
PaeI GCATGC 1 cut(s) 143
PciSI GCTCTTC 1 cut(s) 63
PctI GAATGC 1 cut(s) 680
PkrI GCNGC 4 cut(s) 169, 172, 856, 859
PleI GAGTC 1 cut(s) 100
PluTI GGCGCC 1 cut(s) 727
PpsI GAGTC 1 cut(s) 100
Ppu21I YACGTR 1 cut(s) 586
PpuMI RGGWCCY 1 cut(s) 285
PshAI GACNNNNGTC 1 cut(s) 558
Psp5II RGGWCCY 1 cut(s) 285
PspN4I GGNNCC 4 cut(s) 287, 434, 610, 725
PspPI GGNCC 3 cut(s) 227, 285, 609
PspPPI RGGWCCY 1 cut(s) 285
PstNI CAGNNNCTG 1 cut(s) 694
PsuI RGATCY 2 cut(s) 569, 620
RsaI GTAC 3 cut(s) 41, 120, 450
RsaNI GTAC 3 cut(s) 40, 119, 449
RseI CAYNNNNRTG 1 cut(s) 395
SapI GCTCTTC 1 cut(s) 63
SaqAI TTAA 2 cut(s) 441, 471
SatI GCNGC 4 cut(s) 168, 171, 855, 858
Sau3AI GATC 4 cut(s) 523, 569, 620, 780
Sau96I GGNCC 3 cut(s) 227, 285, 609
SchI GAGTC 1 cut(s) 101
ScrFI CCNGG 2 cut(s) 211, 212
SduI GDGCHC 3 cut(s) 102, 435, 469
SfaNI GCATC 3 cut(s) 667, 857, 859
SfoI GGCGCC 1 cut(s) 725
SfuI TTCGAA 1 cut(s) 351
SinI GGWCC 2 cut(s) 227, 285
SmaI CCCGGG 1 cut(s) 212
SmiMI CAYNNNNRTG 1 cut(s) 395
SphI GCATGC 1 cut(s) 143
Sse9I AATT 4 cut(s) 347, 453, 532, 784
SsiI CCGC 2 cut(s) 137, 852
SspDI GGCGCC 1 cut(s) 723
StyD4I CCNGG 2 cut(s) 209, 210
StyI CCWWGG 1 cut(s) 357
TaaI ACNGT 2 cut(s) 277, 690
TaiI ACGT 1 cut(s) 588
TaqI TCGA 1 cut(s) 351
TasI AATT 4 cut(s) 347, 453, 532, 784
Tru1I TTAA 2 cut(s) 441, 471
Tru9I TTAA 2 cut(s) 441, 471
TscAI CASTG 2 cut(s) 818, 841
TseI GCWGC 4 cut(s) 167, 170, 854, 857
TspDTI ATGAA 2 cut(s) 141, 737
TspGWI ACGGA 1 cut(s) 782
TspMI CCCGGG 1 cut(s) 210
TspRI CASTG 2 cut(s) 818, 841
VpaK11BI GGWCC 2 cut(s) 227, 285
XapI RAATTY 2 cut(s) 347, 532
XceI RCATGY 1 cut(s) 143
XcmI CCANNNNNNNNNTGG 1 cut(s) 631
XmaI CCCGGG 1 cut(s) 210
Zsp2I ATGCAT 4 cut(s) 181, 402, 682, 850
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.